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Conserved domains on  [gi|755605768|ref|WP_042529512|]
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MULTISPECIES: F0F1 ATP synthase subunit epsilon [Oceanobacillus]

Protein Classification

FoF1 ATP synthase subunit epsilon( domain architecture ID 11479057)

FoF1 ATP synthase subunit epsilon is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Gene Ontology:  GO:0045261|GO:0046933|GO:0005524|GO:0005886
SCOP:  3000182|3000785

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
atpC PRK00571
F0F1 ATP synthase subunit epsilon; Validated
 1-131 2.10e-51

F0F1 ATP synthase subunit epsilon; Validated


:

Pssm-ID: 234796 [Multi-domain]  Cd Length: 135  Bit Score: 159.16  E-value: 2.10e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   1 MSTLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKS-GDTKQVTISGGFMEVQPDKVTILA 79
Cdd:PRK00571   1 MATLTVDIVSPEGLIYSGEVEEVVVPGTEGELGILPGHAPLLTALKPGVVRIKKDdGEEEVIAVSGGFLEVQPDKVTVLA 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 755605768  80 QSAETADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELALKRAINRLEIAN 131
Cdd:PRK00571  81 DSAERADDIDEARAEEAKERAEEALENKHDDVDYARAQAALARAIARLRVAE 132
 
Name Accession Description Interval E-value
atpC PRK00571
F0F1 ATP synthase subunit epsilon; Validated
 1-131 2.10e-51

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 234796 [Multi-domain]  Cd Length: 135  Bit Score: 159.16  E-value: 2.10e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   1 MSTLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKS-GDTKQVTISGGFMEVQPDKVTILA 79
Cdd:PRK00571   1 MATLTVDIVSPEGLIYSGEVEEVVVPGTEGELGILPGHAPLLTALKPGVVRIKKDdGEEEVIAVSGGFLEVQPDKVTVLA 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 755605768  80 QSAETADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELALKRAINRLEIAN 131
Cdd:PRK00571  81 DSAERADDIDEARAEEAKERAEEALENKHDDVDYARAQAALARAIARLRVAE 132
AtpC COG0355
FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP ...
 4-131 1.56e-49

FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP synthase, epsilon subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440124 [Multi-domain]  Cd Length: 131  Bit Score: 154.19  E-value: 1.56e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   4 LEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKK-SGDTKQVTISGGFMEVQPDKVTILAQSA 82
Cdd:COG0355    1 LKLEIVTPERVLFSGEVESVVAPGAEGEFGILPGHAPLLTALKPGVVRIRTeDGEEEYFAVSGGFLEVQPNKVTILADTA 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 755605768  83 ETADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELALKRAINRLEIAN 131
Cdd:COG0355   81 ERAEDIDVERAEEAKERAEERLEEAKDDIDYARAEAALARALARLRAAE 129
F1-ATPase_delta cd12152
mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, ...
 4-125 4.05e-43

mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain. In bacteria, which is lacking a eukaryotic epsilon subunit homolog, this subunit is called the epsilon subunit.


Pssm-ID: 213395 [Multi-domain]  Cd Length: 123  Bit Score: 137.64  E-value: 4.05e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   4 LEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKK-SGDTKQVTISGGFMEVQPDKVTILAQSA 82
Cdd:cd12152    1 LKLEIVTPERVFFSGEVESVVLPGTEGEFGILPGHAPLVTALKPGVLRIRDeDGEEKYFAVSGGFLEVTPNRVTILADEA 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 755605768  83 ETADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELALKRAIN 125
Cdd:cd12152   81 ERPEDIDVERAEEALERAEERLAQAKDEREKARAEAALERALA 123
ATP_synt_epsi TIGR01216
ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five ...
 3-131 1.04e-39

ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five types of subunits in the F1 part of F1/F0 ATP synthases. Members of this family are designated epsilon in bacterial and chloroplast systems but designated delta in mitochondria, where the counterpart of the bacterial delta subunit is designated OSCP. In a few cases (Propionigenium modestum, Acetobacterium woodii) scoring above the trusted cutoff and designated here as exceptions, Na+ replaces H+ for translocation. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273506 [Multi-domain]  Cd Length: 130  Bit Score: 129.30  E-value: 1.04e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768    3 TLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQ-VTISGGFMEVQPDKVTILAQS 81
Cdd:TIGR01216   1 TLKLEIVTPEGEIYSGEVESVILPGSEGELGILPGHAPLITALKPGVVRIRKLGDDWEhIAVSGGFAEVQPDKVTILADG 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 755605768   82 AETADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELALKRAINRLEIAN 131
Cdd:TIGR01216  81 AVFADDIDEAEAEKALEAAEKLLESAEDDKDLAEALLKLKKARAQLEALE 130
ATP-synt_DE_N pfam02823
ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These ...
 4-82 1.21e-30

ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).


Pssm-ID: 460714 [Multi-domain]  Cd Length: 80  Bit Score: 104.83  E-value: 1.21e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768    4 LEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQ-VTISGGFMEVQPDKVTILAQSA 82
Cdd:pfam02823   1 LKLEIVTPERVVFSGEVEMVVAPGAEGELGILPGHAPLLTALKPGVLRIKTEDGEEEyIAVSGGFLEVQPNKVTILADSA 80
 
Name Accession Description Interval E-value
atpC PRK00571
F0F1 ATP synthase subunit epsilon; Validated
 1-131 2.10e-51

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 234796 [Multi-domain]  Cd Length: 135  Bit Score: 159.16  E-value: 2.10e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   1 MSTLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKS-GDTKQVTISGGFMEVQPDKVTILA 79
Cdd:PRK00571   1 MATLTVDIVSPEGLIYSGEVEEVVVPGTEGELGILPGHAPLLTALKPGVVRIKKDdGEEEVIAVSGGFLEVQPDKVTVLA 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 755605768  80 QSAETADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELALKRAINRLEIAN 131
Cdd:PRK00571  81 DSAERADDIDEARAEEAKERAEEALENKHDDVDYARAQAALARAIARLRVAE 132
AtpC COG0355
FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP ...
 4-131 1.56e-49

FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP synthase, epsilon subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440124 [Multi-domain]  Cd Length: 131  Bit Score: 154.19  E-value: 1.56e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   4 LEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKK-SGDTKQVTISGGFMEVQPDKVTILAQSA 82
Cdd:COG0355    1 LKLEIVTPERVLFSGEVESVVAPGAEGEFGILPGHAPLLTALKPGVVRIRTeDGEEEYFAVSGGFLEVQPNKVTILADTA 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 755605768  83 ETADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELALKRAINRLEIAN 131
Cdd:COG0355   81 ERAEDIDVERAEEAKERAEERLEEAKDDIDYARAEAALARALARLRAAE 129
atpC PRK13446
F0F1 ATP synthase subunit epsilon; Provisional
 1-131 1.47e-46

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184056 [Multi-domain]  Cd Length: 136  Bit Score: 147.03  E-value: 1.47e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   1 MSTLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQVTISGGFMEVQPDKVTILAQ 80
Cdd:PRK13446   2 AKKLKLEIVTPEKKVLSEEVDEVGAPGVLGEFGVLPGHAPFLTALKIGELTYKKGGKTHYVAVNGGFAEVSNNKVTVLAE 81

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 755605768  81 SAETADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELALKRAINRLEIAN 131
Cdd:PRK13446  82 TAERAEEIDVERARAALERAEQRLKKLTPEDDSARAEAALERALIRLQVAG 132
F1-ATPase_delta cd12152
mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, ...
 4-125 4.05e-43

mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain. In bacteria, which is lacking a eukaryotic epsilon subunit homolog, this subunit is called the epsilon subunit.


Pssm-ID: 213395 [Multi-domain]  Cd Length: 123  Bit Score: 137.64  E-value: 4.05e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   4 LEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKK-SGDTKQVTISGGFMEVQPDKVTILAQSA 82
Cdd:cd12152    1 LKLEIVTPERVFFSGEVESVVLPGTEGEFGILPGHAPLVTALKPGVLRIRDeDGEEKYFAVSGGFLEVTPNRVTILADEA 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 755605768  83 ETADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELALKRAIN 125
Cdd:cd12152   81 ERPEDIDVERAEEALERAEERLAQAKDEREKARAEAALERALA 123
ATP_synt_epsi TIGR01216
ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five ...
 3-131 1.04e-39

ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five types of subunits in the F1 part of F1/F0 ATP synthases. Members of this family are designated epsilon in bacterial and chloroplast systems but designated delta in mitochondria, where the counterpart of the bacterial delta subunit is designated OSCP. In a few cases (Propionigenium modestum, Acetobacterium woodii) scoring above the trusted cutoff and designated here as exceptions, Na+ replaces H+ for translocation. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273506 [Multi-domain]  Cd Length: 130  Bit Score: 129.30  E-value: 1.04e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768    3 TLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQ-VTISGGFMEVQPDKVTILAQS 81
Cdd:TIGR01216   1 TLKLEIVTPEGEIYSGEVESVILPGSEGELGILPGHAPLITALKPGVVRIRKLGDDWEhIAVSGGFAEVQPDKVTILADG 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 755605768   82 AETADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELALKRAINRLEIAN 131
Cdd:TIGR01216  81 AVFADDIDEAEAEKALEAAEKLLESAEDDKDLAEALLKLKKARAQLEALE 130
atpC PRK14735
F0F1 ATP synthase subunit epsilon; Provisional
 4-130 5.07e-32

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 173197 [Multi-domain]  Cd Length: 139  Bit Score: 110.47  E-value: 5.07e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   4 LEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQVTISGGFMEVQPDKVTILAQSAE 83
Cdd:PRK14735   3 IHLEIVTAERVVLSDDVDMISAPTKDGRVGILPRHAPLLTILEPGELDIVKNGVRTPFAISGGFMEVLPHRVTILADTAE 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 755605768  84 TADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELALKRAINRLEIA 130
Cdd:PRK14735  83 RADEIDEARAEQARAEAEQRRRERQSEQDLALAEAKLRRAMVRLRVA 129
ATP-synt_DE_N pfam02823
ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These ...
 4-82 1.21e-30

ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).


Pssm-ID: 460714 [Multi-domain]  Cd Length: 80  Bit Score: 104.83  E-value: 1.21e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768    4 LEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQ-VTISGGFMEVQPDKVTILAQSA 82
Cdd:pfam02823   1 LKLEIVTPERVVFSGEVEMVVAPGAEGELGILPGHAPLLTALKPGVLRIKTEDGEEEyIAVSGGFLEVQPNKVTILADSA 80
atpC PRK13450
F0F1 ATP synthase subunit epsilon; Provisional
 1-131 1.24e-30

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184059 [Multi-domain]  Cd Length: 132  Bit Score: 106.39  E-value: 1.24e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   1 MSTLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRL-KKSGDTKQVTISGGFMEVQPDKVTILA 79
Cdd:PRK13450   1 ANNIKLTILTPEKNFYIGEVKEVITEGLDGDIAILPNHVPLITYLKPTITKIiDENGEKKKIFTSSGVLKVENNEVYILC 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 755605768  80 QSAETADHIDVLRAKQAKERAEKRLQdKSDTVDRYRAELALKRAINRLEIAN 131
Cdd:PRK13450  81 DASEWPEEIDIKRAENAKKRAEERLR-KKDEIDVKRAELALFRAIARIKLKE 131
atpE CHL00063
ATP synthase CF1 epsilon subunit
 3-132 9.42e-27

ATP synthase CF1 epsilon subunit


Pssm-ID: 214351 [Multi-domain]  Cd Length: 134  Bit Score: 96.47  E-value: 9.42e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   3 TLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQVTISGGFMEVQPDKVTILAQSA 82
Cdd:CHL00063   2 TLNLRVLTPNRIVWDSEVEEIILPTNSGQIGVLPNHAPIATALDIGVLRIRLNDQWLTMALMGGFARIGNNEITILVNDA 81

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 755605768  83 ETADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELALKRAINRLEIANS 132
Cdd:CHL00063  82 EKGSDIDPQEAQQTLEIAEANLEKAEGKKQKIEANLALKRARARVEAINA 131
atpC PRK13444
F0F1 ATP synthase subunit epsilon; Provisional
 4-130 4.54e-16

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 139576 [Multi-domain]  Cd Length: 127  Bit Score: 69.14  E-value: 4.54e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   4 LEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQVTISGGFMEVQPDKVTILAQSAE 83
Cdd:PRK13444   6 LTVSVISPEKILYKGEVDSLIVPGSEGFFGILPNHAPLVATLGIGLLEIRKGEKLKRISVEGGFCEVKDNQISILTDHGA 85

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 755605768  84 TADHIDVLRAKQAKERAEKRLQDKSDtvdryraELALKRAINRLEIA 130
Cdd:PRK13444  86 LKEDIDHEHEKKLLAEAEKLPPSDSK-------NLLLQKTKTRILVA 125
atpC PRK13452
F0F1 ATP synthase subunit epsilon; Provisional
 4-132 8.56e-16

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 106409 [Multi-domain]  Cd Length: 145  Bit Score: 69.00  E-value: 8.56e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   4 LEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQVTISGGFMEVQPDKVTILAQSAE 83
Cdd:PRK13452   6 LKVDVVSPLGSVFKGEADMVSLRGSAGEMGIAYGHTELLSTLPAGVVNVRKDQHTDVLYVSGGIVEVTPTRVTIMVDDME 85

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 755605768  84 TADHIDVLRAKQAKERAEKRLQD-KSDTVDRYRAELALKRAINRLEIANS 132
Cdd:PRK13452  86 RAENLNQAEAEKARARAKEVLKNpDASKLDIEAANKRLKEADARLKALNS 135
atpC PRK13442
F0F1 ATP synthase subunit epsilon; Provisional
 1-86 5.97e-15

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184055 [Multi-domain]  Cd Length: 89  Bit Score: 65.04  E-value: 5.97e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   1 MSTLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQV-TISGGFMEVQPDKVTILA 79
Cdd:PRK13442   3 GATLHVNIVAADRPVWSGEATMVVARTTEGDIGILPGHEPLLGVLESGTVTVVTPGGERISaAVDGGFISFDSNKLTVLA 82


                 ....*..
gi 755605768  80 QSAETAD 86
Cdd:PRK13442  83 ERAELVA 89
ATP-synt_DE pfam00401
ATP synthase, Delta/Epsilon chain, long alpha-helix domain; Part of the ATP synthase CF(1). ...
 86-129 1.20e-13

ATP synthase, Delta/Epsilon chain, long alpha-helix domain; Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. This subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).


Pssm-ID: 459802  Cd Length: 45  Bit Score: 60.47  E-value: 1.20e-13
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 755605768   86 DHIDVLRAKQAKERAEKRLQDK-SDTVDRYRAELALKRAINRLEI 129
Cdd:pfam00401   1 EDIDVARAEEAKERAEERLAQAkQDDIDYARAQAALARALARLQA 45
atpC PRK13451
F0F1 ATP synthase subunit epsilon; Provisional
 4-102 3.12e-12

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 172059  Cd Length: 101  Bit Score: 58.65  E-value: 3.12e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   4 LEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQVTISGGFMEVQPDKVTILAQSAE 83
Cdd:PRK13451   1 MKVKIVTPYGIVYDRESDFVSFRTVEGEMGILPRRAPIIAKLSVCDVKIKSGDDEYEYKVADGFLHCDGKNVIIITEEAG 80

                         90
                 ....*....|....*....
gi 755605768  84 TADHIDVLRAKQAKERAEK 102
Cdd:PRK13451  81 REEEISPHRYLGARERVER 99
atpC PRK13449
ATP synthase F1 subunit epsilon;
1-85 6.08e-12

ATP synthase F1 subunit epsilon;


Pssm-ID: 184058 [Multi-domain]  Cd Length: 88  Bit Score: 57.47  E-value: 6.08e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   1 MSTLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTK--QVTISGGFMEVQPDKVTIL 78
Cdd:PRK13449   1 MAKLHFELVTPERLLRSGEVDMVVVPGTEGDFGVLAGHAPFMTTLREGEVTVYSSDGAApeVFHVQGGFAEVNEKGLTIL 80


                 ....*..
gi 755605768  79 AQSAETA 85
Cdd:PRK13449  81 AEHAVEA 87
atpC PRK13448
F0F1 ATP synthase subunit epsilon; Provisional
 1-128 1.33e-10

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 139579 [Multi-domain]  Cd Length: 135  Bit Score: 55.16  E-value: 1.33e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   1 MSTLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQVTISGGFMEVQPDKVTILAQ 80
Cdd:PRK13448   1 MATFHFDLVSPEKLAFSGEVDQVDIPGVEGDFGVLAGHAPVVAVIRPGILTVTAGGNQQKIVVLGGLAEVSEKGLTVLAD 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 755605768  81 SAETADHIDVLRAKQAKERAEKRLQDKSDTVdryraelaLKRAINRLE 128
Cdd:PRK13448  81 VATSVADLDLAQFAATIAEMEAQLAGKVGDE--------LDRAIERLD 120
atpC PRK14736
F0F1 ATP synthase subunit epsilon; Provisional
 1-89 1.01e-08

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 173198 [Multi-domain]  Cd Length: 133  Bit Score: 50.18  E-value: 1.01e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   1 MSTLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKS-GDTKQVTISGGFMEVQPDKVTILA 79
Cdd:PRK14736   1 MATFHFDLVGPERTLYSGEVEAVQLPGSEGEMTVLPGHAPVLTTLKVGVITVTETtGNGKRIYVRGGFAEIGPTSVTVLA 80

                         90
                 ....*....|....*
gi 755605768  80 QSAE-----TADHID 89
Cdd:PRK14736  81 ERAApveelTPEMID 95
atpC PRK00539
F0F1 ATP synthase subunit epsilon; Validated
 1-120 5.50e-06

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 179059 [Multi-domain]  Cd Length: 133  Bit Score: 42.96  E-value: 5.50e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   1 MSTLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQ-VTISGGFMEVQPDKVTILA 79
Cdd:PRK00539   1 MQMLRFLVLSPSGIKLDEKIISAQVKTTEGYAGLNRNRAPLIAAIQSHVCKITFADKTKRsAIIGAGLLLIKKTEAKIFT 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 755605768  80 QSAETADHIDVLRAKQAKERAEKRLQDKSDTVDRYRAELAL 120
Cdd:PRK00539  81 ENFVFADELDYDETLKRKKELERKIKHTKDTKLNIKIEQNL 121
atpC PRK01474
F0F1 ATP synthase subunit epsilon; Validated
 3-82 1.02e-05

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 100879  Cd Length: 112  Bit Score: 41.78  E-value: 1.02e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   3 TLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPL-----QISIVRLKKSGDTkqVTISGGFMEVQPDKVTI 77
Cdd:PRK01474   4 TILVKIITPLSIAFEKQAKMVTMPGEEGMFGVLPSHVPMIVSLkaglvQVYIDDMHKSENT--YLISGGVTEVTGNYINI 81


                 ....*
gi 755605768  78 LAQSA 82
Cdd:PRK01474  82 ATETA 86
atpC PRK13443
F0F1 ATP synthase subunit epsilon; Provisional
 3-108 2.96e-04

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 237388 [Multi-domain]  Cd Length: 136  Bit Score: 38.37  E-value: 2.96e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   3 TLEVSVVTPEGPILEDSFDMVVCKAETGEIGILPKHIPLVSPLQISIVRLKKSGDTKQVTISGGFMEVQPDKVTILAQSA 82
Cdd:PRK13443   4 TLQFDLVSPERRLASFQATAVQIPGADGDMTAMEGHAPTITTLRPGILRAHGPSGTQEYAVTGGFAEINATSISVLAEKA 83

                         90       100       110
                 ....*....|....*....|....*....|.
gi 755605768  83 -----ETADHIDVLrAKQAKERAEKRLQDKS 108
Cdd:PRK13443  84 ipveeLTGAVLDEF-IAEARELASVALPENE 113
PRK13447 PRK13447
F0F1 ATP synthase subunit epsilon; Provisional
 4-107 8.70e-04

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184057 [Multi-domain]  Cd Length: 136  Bit Score: 36.91  E-value: 8.70e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755605768   4 LEVSVVTPEGPILEDSfDMVVCKAE--TGEIGILPKHIPLVSPLQISIVRLKKSGDTKQ--------VTISGGFMevqpd 73
Cdd:PRK13447   1 LRLTIATPLAVVVDEL-DIVSLRAEdaSGGFGILPGHADFLTVLRASVVRWRRADGATHycavrggvLRVTGGAR----- 74

                         90       100       110
                 ....*....|....*....|....*....|....
gi 755605768  74 kVTILAQSAETADHIDVLRAkQAKERAEKRLQDK 107
Cdd:PRK13447  75 -VEIACREAVLGEDLARLEA-VVRAVRAAQLDAA 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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