|
Name |
Accession |
Description |
Interval |
E-value |
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
76-398 |
3.16e-44 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 159.31 E-value: 3.16e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 76 NFTHRLLAAALKSHSGNISCMDFSSNGKYLATCADDRTIRIWSTKDflQREHRSMRAnveldHATLVR---FSPDCRaFI 152
Cdd:COG2319 106 DLATGLLLRTLTGHTGAVRSVAFSPDGKTLASGSADGTVRLWDLAT--GKLLRTLTG-----HSGAVTsvaFSPDGK-LL 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 153 VWLANGDTLRVFKMTKREDgGYTFTAtpedfpkkHKAPVIDIGIANTGKFIMTASSDTTVLIWSLK-GQVLSTINTNQMN 231
Cdd:COG2319 178 ASGSDDGTVRLWDLATGKL-LRTLTG--------HTGAVRSVAFSPDGKLLASGSADGTVRLWDLAtGKLLRTLTGHSGS 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 232 NTHAAVSPCGRFVASCGFTPDVKVWEVcfgKKGEfqevvRAFELKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWDTDve 311
Cdd:COG2319 249 VRSVAFSPDGRLLASGSADGTVRLWDL---ATGE-----LLRTLTGHSGGVNSVAFSPDGKLLASGSDDGTVRLWDLA-- 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 312 ykkkqDPYLLKTGRFEEAAGAApcrLALSPNAQVLALASG-SSIHLYNTRRGEKEECFeRVHGECIANLSFDITGRFLAS 390
Cdd:COG2319 319 -----TGKLLRTLTGHTGAVRS---VAFSPDGKTLASGSDdGTVRLWDLATGELLRTL-TGHTGAVTSVAFSPDGRTLAS 389
|
....*....
gi 7549793 391 CG-DRAVRL 398
Cdd:COG2319 390 GSaDGTVRL 398
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
82-399 |
1.49e-34 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 130.15 E-value: 1.49e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 82 LAAALKSHSGNISCMDFSSNGKYLATCADDRTIRIWSTKDFLQrehrsMRANVELDHA-TLVRFSPDcRAFIVWLANGDT 160
Cdd:cd00200 1 LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGEL-----LRTLKGHTGPvRDVAASAD-GTYLASGSSDKT 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 161 LRVFKMTKREDgGYTFTAtpedfpkkHKAPVIDIGIANTGKFIMTASSDTTVLIWSL-KGQVLSTINTNQMNNTHAAVSP 239
Cdd:cd00200 75 IRLWDLETGEC-VRTLTG--------HTSYVSSVAFSPDGRILSSSSRDKTIKVWDVeTGKCLTTLRGHTDWVNSVAFSP 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 240 CGRFVASCGFTPDVKVWEVcfgKKGEFQEVvrafeLKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWDTDveyKKKQdpy 319
Cdd:cd00200 146 DGTFVASSSQDGTIKLWDL---RTGKCVAT-----LTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS---TGKC--- 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 320 lLKTGRFEEaagAAPCRLALSPNAQVLALASG-SSIHLYNTRRGEKEECFERVHGECIAnLSFDITGRFLASCG-DRAVR 397
Cdd:cd00200 212 -LGTLRGHE---NGVNSVAFSPDGYLLASGSEdGTIRVWDLRTGECVQTLSGHTNSVTS-LAWSPDGKRLASGSaDGTIR 286
|
..
gi 7549793 398 LF 399
Cdd:cd00200 287 IW 288
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
86-118 |
1.96e-09 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 52.70 E-value: 1.96e-09
10 20 30
....*....|....*....|....*....|...
gi 7549793 86 LKSHSGNISCMDFSSNGKYLATCADDRTIRIWS 118
Cdd:smart00320 8 LKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
86-118 |
5.68e-09 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 51.58 E-value: 5.68e-09
10 20 30
....*....|....*....|....*....|...
gi 7549793 86 LKSHSGNISCMDFSSNGKYLATCADDRTIRIWS 118
Cdd:pfam00400 7 LEGHTGSVTSLAFSPDGKLLASGSDDGTVKVWD 39
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
76-398 |
3.16e-44 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 159.31 E-value: 3.16e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 76 NFTHRLLAAALKSHSGNISCMDFSSNGKYLATCADDRTIRIWSTKDflQREHRSMRAnveldHATLVR---FSPDCRaFI 152
Cdd:COG2319 106 DLATGLLLRTLTGHTGAVRSVAFSPDGKTLASGSADGTVRLWDLAT--GKLLRTLTG-----HSGAVTsvaFSPDGK-LL 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 153 VWLANGDTLRVFKMTKREDgGYTFTAtpedfpkkHKAPVIDIGIANTGKFIMTASSDTTVLIWSLK-GQVLSTINTNQMN 231
Cdd:COG2319 178 ASGSDDGTVRLWDLATGKL-LRTLTG--------HTGAVRSVAFSPDGKLLASGSADGTVRLWDLAtGKLLRTLTGHSGS 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 232 NTHAAVSPCGRFVASCGFTPDVKVWEVcfgKKGEfqevvRAFELKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWDTDve 311
Cdd:COG2319 249 VRSVAFSPDGRLLASGSADGTVRLWDL---ATGE-----LLRTLTGHSGGVNSVAFSPDGKLLASGSDDGTVRLWDLA-- 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 312 ykkkqDPYLLKTGRFEEAAGAApcrLALSPNAQVLALASG-SSIHLYNTRRGEKEECFeRVHGECIANLSFDITGRFLAS 390
Cdd:COG2319 319 -----TGKLLRTLTGHTGAVRS---VAFSPDGKTLASGSDdGTVRLWDLATGELLRTL-TGHTGAVTSVAFSPDGRTLAS 389
|
....*....
gi 7549793 391 CG-DRAVRL 398
Cdd:COG2319 390 GSaDGTVRL 398
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
80-415 |
1.96e-38 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 143.51 E-value: 1.96e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 80 RLLAAALKSHSGNISCMDFSSNGKYLATCADDRTIRIWStkdfLQREHRSMRANVELDHATLVRFSPDCRaFIVWLANGD 159
Cdd:COG2319 68 GALLATLLGHTAAVLSVAFSPDGRLLASASADGTVRLWD----LATGLLLRTLTGHTGAVRSVAFSPDGK-TLASGSADG 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 160 TLRVFKMTKREDgGYTFTAtpedfpkkHKAPVIDIGIANTGKFIMTASSDTTVLIWSLK-GQVLSTINTNQMNNTHAAVS 238
Cdd:COG2319 143 TVRLWDLATGKL-LRTLTG--------HSGAVTSVAFSPDGKLLASGSDDGTVRLWDLAtGKLLRTLTGHTGAVRSVAFS 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 239 PCGRFVASCGFTPDVKVWEVcfgKKGEFQevvraFELKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWDTDveykkkqdp 318
Cdd:COG2319 214 PDGKLLASGSADGTVRLWDL---ATGKLL-----RTLTGHSGSVRSVAFSPDGRLLASGSADGTVRLWDLA--------- 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 319 yllkTG---RFEEAAGAAPCRLALSPNAQVLALASG-SSIHLYNTRRGEKEECFERvHGECIANLSFDITGRFLASCG-D 393
Cdd:COG2319 277 ----TGellRTLTGHSGGVNSVAFSPDGKLLASGSDdGTVRLWDLATGKLLRTLTG-HTGAVRSVAFSPDGKTLASGSdD 351
|
330 340
....*....|....*....|..
gi 7549793 394 RAVRLFHNTPGHRamVEEMQGH 415
Cdd:COG2319 352 GTVRLWDLATGEL--LRTLTGH 371
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
82-309 |
6.05e-36 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 136.96 E-value: 6.05e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 82 LAAALKSHSGNISCMDFSSNGKYLATCADDRTIRIWSTKDflQREHRSMRANVELDHAtlVRFSPDCRafivWLANGD-- 159
Cdd:COG2319 196 LLRTLTGHTGAVRSVAFSPDGKLLASGSADGTVRLWDLAT--GKLLRTLTGHSGSVRS--VAFSPDGR----LLASGSad 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 160 -TLRVFKMTkredggytfTATPEDFPKKHKAPVIDIGIANTGKFIMTASSDTTVLIWSLK-GQVLSTINTNQMNNTHAAV 237
Cdd:COG2319 268 gTVRLWDLA---------TGELLRTLTGHSGGVNSVAFSPDGKLLASGSDDGTVRLWDLAtGKLLRTLTGHTGAVRSVAF 338
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 7549793 238 SPCGRFVASCGFTPDVKVWEVCFGKKGEfqevvrafELKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWDTD 309
Cdd:COG2319 339 SPDGKTLASGSDDGTVRLWDLATGELLR--------TLTGHTGAVTSVAFSPDGRTLASGSADGTVRLWDLA 402
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
82-399 |
1.49e-34 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 130.15 E-value: 1.49e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 82 LAAALKSHSGNISCMDFSSNGKYLATCADDRTIRIWSTKDFLQrehrsMRANVELDHA-TLVRFSPDcRAFIVWLANGDT 160
Cdd:cd00200 1 LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGEL-----LRTLKGHTGPvRDVAASAD-GTYLASGSSDKT 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 161 LRVFKMTKREDgGYTFTAtpedfpkkHKAPVIDIGIANTGKFIMTASSDTTVLIWSL-KGQVLSTINTNQMNNTHAAVSP 239
Cdd:cd00200 75 IRLWDLETGEC-VRTLTG--------HTSYVSSVAFSPDGRILSSSSRDKTIKVWDVeTGKCLTTLRGHTDWVNSVAFSP 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 240 CGRFVASCGFTPDVKVWEVcfgKKGEFQEVvrafeLKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWDTDveyKKKQdpy 319
Cdd:cd00200 146 DGTFVASSSQDGTIKLWDL---RTGKCVAT-----LTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS---TGKC--- 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 320 lLKTGRFEEaagAAPCRLALSPNAQVLALASG-SSIHLYNTRRGEKEECFERVHGECIAnLSFDITGRFLASCG-DRAVR 397
Cdd:cd00200 212 -LGTLRGHE---NGVNSVAFSPDGYLLASGSEdGTIRVWDLRTGECVQTLSGHTNSVTS-LAWSPDGKRLASGSaDGTIR 286
|
..
gi 7549793 398 LF 399
Cdd:cd00200 287 IW 288
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
76-358 |
3.65e-28 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 112.81 E-value: 3.65e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 76 NFTHRLLAAALKSHSGNISCMDFSSNGKYLATCADDRTIRIWSTKDflQREHRSMRAnveldHATLVR---FSPDCRafI 152
Cdd:cd00200 37 DLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLET--GECVRTLTG-----HTSYVSsvaFSPDGR--I 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 153 VWLANGD-TLRVFKMTKREDgGYTFTAtpedfpkkHKAPVIDIGIANTGKFIMTASSDTTVLIWSLK-GQVLSTINTNQM 230
Cdd:cd00200 108 LSSSSRDkTIKVWDVETGKC-LTTLRG--------HTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRtGKCVATLTGHTG 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 231 NNTHAAVSPCGRFVASCGFTPDVKVWEVCFGKKGEfqevvrafELKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWDTDV 310
Cdd:cd00200 179 EVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLG--------TLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRT 250
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 7549793 311 EYKKKQdpyllktgrFEEAAGAAPCrLALSPNAQVlaLASGS---SIHLYN 358
Cdd:cd00200 251 GECVQT---------LSGHTNSVTS-LAWSPDGKR--LASGSadgTIRIWD 289
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
187-409 |
4.03e-19 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 88.81 E-value: 4.03e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 187 HKAPVIDIGIANTGKFIMTASSDTTVLIW-SLKGQVLSTINTNQMNNTHAAVSPCGRFVASCGFTPDVKVWEVCFGKkge 265
Cdd:COG2319 35 LAAAVASLAASPDGARLAAGAGDLTLLLLdAAAGALLATLLGHTAAVLSVAFSPDGRLLASASADGTVRLWDLATGL--- 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 266 fqevvRAFELKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWDtdveykkkqdpylLKTGR----FEEAAGAAPCrLALSP 341
Cdd:COG2319 112 -----LLRTLTGHTGAVRSVAFSPDGKTLASGSADGTVRLWD-------------LATGKllrtLTGHSGAVTS-VAFSP 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 7549793 342 NAQVLALASG-SSIHLYNTRRGEKEECFeRVHGECIANLSFDITGRFLASCG-DRAVRLF--------HNTPGHRAMV 409
Cdd:COG2319 173 DGKLLASGSDdGTVRLWDLATGKLLRTL-TGHTGAVRSVAFSPDGKLLASGSaDGTVRLWdlatgkllRTLTGHSGSV 249
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
76-219 |
3.60e-15 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 76.87 E-value: 3.60e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 76 NFTHRLLAAALKSHSGNISCMDFSSNGKYLATCADDRTIRIWSTKDflQREHRSMRANVelDHATLVRFSPDCRaFIVWL 155
Cdd:COG2319 274 DLATGELLRTLTGHSGGVNSVAFSPDGKLLASGSDDGTVRLWDLAT--GKLLRTLTGHT--GAVRSVAFSPDGK-TLASG 348
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 7549793 156 ANGDTLRVFKMTKREDGgYTFTAtpedfpkkHKAPVIDIGIANTGKFIMTASSDTTVLIWSLKG 219
Cdd:COG2319 349 SDDGTVRLWDLATGELL-RTLTG--------HTGAVTSVAFSPDGRTLASGSADGTVRLWDLAT 403
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
206-415 |
3.15e-12 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 68.01 E-value: 3.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 206 ASSDTTVLIWSLKGQVLSTINTNQMNNTHAAVSPCGRFVASCGFTPDVKVWEVcfgkkgefQEVVRAFELKGHSAAVHSF 285
Cdd:COG2319 13 SADLALALLAAALGALLLLLLGLAAAVASLAASPDGARLAAGAGDLTLLLLDA--------AAGALLATLLGHTAAVLSV 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7549793 286 AFSNDSRRMASVSKDGTWKLWDTDveykkkqDPYLLKTGRFEEAAGAApcrLALSPNAQVLALASG-SSIHLYNTRRGEK 364
Cdd:COG2319 85 AFSPDGRLLASASADGTVRLWDLA-------TGLLLRTLTGHTGAVRS---VAFSPDGKTLASGSAdGTVRLWDLATGKL 154
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 7549793 365 EECFERvHGECIANLSFDITGRFLASCG-DRAVRLFHNTPGHRamVEEMQGH 415
Cdd:COG2319 155 LRTLTG-HSGAVTSVAFSPDGKLLASGSdDGTVRLWDLATGKL--LRTLTGH 203
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
86-118 |
1.96e-09 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 52.70 E-value: 1.96e-09
10 20 30
....*....|....*....|....*....|...
gi 7549793 86 LKSHSGNISCMDFSSNGKYLATCADDRTIRIWS 118
Cdd:smart00320 8 LKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
86-118 |
5.68e-09 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 51.58 E-value: 5.68e-09
10 20 30
....*....|....*....|....*....|...
gi 7549793 86 LKSHSGNISCMDFSSNGKYLATCADDRTIRIWS 118
Cdd:pfam00400 7 LEGHTGSVTSLAFSPDGKLLASGSDDGTVKVWD 39
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
273-307 |
2.08e-08 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 50.00 E-value: 2.08e-08
10 20 30
....*....|....*....|....*....|....*
gi 7549793 273 FELKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWD 307
Cdd:smart00320 6 KTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
274-307 |
5.89e-07 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 45.80 E-value: 5.89e-07
10 20 30
....*....|....*....|....*....|....
gi 7549793 274 ELKGHSAAVHSFAFSNDSRRMASVSKDGTWKLWD 307
Cdd:pfam00400 6 TLEGHTGSVTSLAFSPDGKLLASGSDDGTVKVWD 39
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
185-216 |
7.87e-03 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 34.21 E-value: 7.87e-03
10 20 30
....*....|....*....|....*....|..
gi 7549793 185 KKHKAPVIDIGIANTGKFIMTASSDTTVLIWS 216
Cdd:smart00320 9 KGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
|
|