NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|7531201|sp|O75711|]
View 

RecName: Full=Scrapie-responsive protein 1; AltName: Full=Scrapie-responsive gene 1 protein; Short=ScRG-1; Flags: Precursor

Protein Classification

SCRG1 domain-containing protein( domain architecture ID 10633589)

SCRG1 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
SCRG1 pfam15224
Scrapie-responsive protein 1; This protein family has an important function in acting against ...
 22-97 4.46e-52

Scrapie-responsive protein 1; This protein family has an important function in acting against the prion protein, Scrapie.This family of proteins is found in eukaryotes. Proteins in this family are approximately 98 amino acids in length.


:

Pssm-ID: 464569  Cd Length: 76  Bit Score: 157.67  E-value: 4.46e-52
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 7531201    22 PANRLSCYRKILKDHNCHNLPEGVADLTQIDVNVQDHFWDGKGCEMICYCNFSELLCCPKDVFFGPKISFVIPCNN 97
Cdd:pfam15224  1 PSNRLSCYKKILKDHNCHSIPEGVANLRPIDGNLQDHFWEGKGCEMVCYCNFSELLCCPKDIFFGPKISFVIPCNS 76
 
Name Accession Description Interval E-value
SCRG1 pfam15224
Scrapie-responsive protein 1; This protein family has an important function in acting against ...
 22-97 4.46e-52

Scrapie-responsive protein 1; This protein family has an important function in acting against the prion protein, Scrapie.This family of proteins is found in eukaryotes. Proteins in this family are approximately 98 amino acids in length.


Pssm-ID: 464569  Cd Length: 76  Bit Score: 157.67  E-value: 4.46e-52
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 7531201    22 PANRLSCYRKILKDHNCHNLPEGVADLTQIDVNVQDHFWDGKGCEMICYCNFSELLCCPKDVFFGPKISFVIPCNN 97
Cdd:pfam15224  1 PSNRLSCYKKILKDHNCHSIPEGVANLRPIDGNLQDHFWEGKGCEMVCYCNFSELLCCPKDIFFGPKISFVIPCNS 76
 
Name Accession Description Interval E-value
SCRG1 pfam15224
Scrapie-responsive protein 1; This protein family has an important function in acting against ...
 22-97 4.46e-52

Scrapie-responsive protein 1; This protein family has an important function in acting against the prion protein, Scrapie.This family of proteins is found in eukaryotes. Proteins in this family are approximately 98 amino acids in length.


Pssm-ID: 464569  Cd Length: 76  Bit Score: 157.67  E-value: 4.46e-52
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 7531201    22 PANRLSCYRKILKDHNCHNLPEGVADLTQIDVNVQDHFWDGKGCEMICYCNFSELLCCPKDVFFGPKISFVIPCNN 97
Cdd:pfam15224  1 PSNRLSCYKKILKDHNCHSIPEGVANLRPIDGNLQDHFWEGKGCEMVCYCNFSELLCCPKDIFFGPKISFVIPCNS 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH