RecName: Full=Protein LOL4; AltName: Full=Protein LSD ONE LIKE 4; Short=OsLOL4; AltName: Full=Putative zinc finger LOL4
Protein Classification
LSD1-type zinc finger protein( domain architecture ID 10536532)
LSD1-type zinc finger protein similar to Oryza sativa LSD1 (protein LESION SIMULATING DISEASE 1) that functions as a negative regulator of programmed cell death and hypersensitive response (HR) and a positive regulator of callus differentiation
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| zf-LSD1 | pfam06943 | LSD1 zinc finger; This family consists of several plant specific LSD1 zinc finger domains. ... |
85-107 | 2.93e-05 | ||
LSD1 zinc finger; This family consists of several plant specific LSD1 zinc finger domains. Arabidopsis lsd1 mutants are hyper-responsive to cell death initiators and fail to limit the extent of cell death. Superoxide is a necessary and sufficient signal for cell death propagation. LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. LSD1 protein contains three zinc finger domains, defined by CxxCxRxxLMYxxGASxVxCxxC. It has been suggested that LSD1 defines a zinc finger protein subclass and that LSD1 regulates transcription, via either repression of a pro-death pathway or activation of an anti-death pathway, in response to signals emanating from cells undergoing pathogen-induced hypersensitive cell death. : Pssm-ID: 462045 Cd Length: 23 Bit Score: 38.61 E-value: 2.93e-05
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| zf-LSD1 | pfam06943 | LSD1 zinc finger; This family consists of several plant specific LSD1 zinc finger domains. ... |
47-69 | 5.88e-04 | ||
LSD1 zinc finger; This family consists of several plant specific LSD1 zinc finger domains. Arabidopsis lsd1 mutants are hyper-responsive to cell death initiators and fail to limit the extent of cell death. Superoxide is a necessary and sufficient signal for cell death propagation. LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. LSD1 protein contains three zinc finger domains, defined by CxxCxRxxLMYxxGASxVxCxxC. It has been suggested that LSD1 defines a zinc finger protein subclass and that LSD1 regulates transcription, via either repression of a pro-death pathway or activation of an anti-death pathway, in response to signals emanating from cells undergoing pathogen-induced hypersensitive cell death. : Pssm-ID: 462045 Cd Length: 23 Bit Score: 35.14 E-value: 5.88e-04
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| Name | Accession | Description | Interval | E-value | ||
| zf-LSD1 | pfam06943 | LSD1 zinc finger; This family consists of several plant specific LSD1 zinc finger domains. ... |
85-107 | 2.93e-05 | ||
LSD1 zinc finger; This family consists of several plant specific LSD1 zinc finger domains. Arabidopsis lsd1 mutants are hyper-responsive to cell death initiators and fail to limit the extent of cell death. Superoxide is a necessary and sufficient signal for cell death propagation. LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. LSD1 protein contains three zinc finger domains, defined by CxxCxRxxLMYxxGASxVxCxxC. It has been suggested that LSD1 defines a zinc finger protein subclass and that LSD1 regulates transcription, via either repression of a pro-death pathway or activation of an anti-death pathway, in response to signals emanating from cells undergoing pathogen-induced hypersensitive cell death. Pssm-ID: 462045 Cd Length: 23 Bit Score: 38.61 E-value: 2.93e-05
|
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| LSD1 | TIGR01053 | zinc finger domain, LSD1 subclass; This model describes a putative zinc finger domain found in ... |
82-112 | 3.09e-04 | ||
zinc finger domain, LSD1 subclass; This model describes a putative zinc finger domain found in three closely spaced copies in Arabidopsis protein LSD1 and in two copies in other proteins from the same species. The motif resembles CxxCRxxLMYxxGASxVxCxxC Pssm-ID: 130125 Cd Length: 31 Bit Score: 36.28 E-value: 3.09e-04
|
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| zf-LSD1 | pfam06943 | LSD1 zinc finger; This family consists of several plant specific LSD1 zinc finger domains. ... |
47-69 | 5.88e-04 | ||
LSD1 zinc finger; This family consists of several plant specific LSD1 zinc finger domains. Arabidopsis lsd1 mutants are hyper-responsive to cell death initiators and fail to limit the extent of cell death. Superoxide is a necessary and sufficient signal for cell death propagation. LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. LSD1 protein contains three zinc finger domains, defined by CxxCxRxxLMYxxGASxVxCxxC. It has been suggested that LSD1 defines a zinc finger protein subclass and that LSD1 regulates transcription, via either repression of a pro-death pathway or activation of an anti-death pathway, in response to signals emanating from cells undergoing pathogen-induced hypersensitive cell death. Pssm-ID: 462045 Cd Length: 23 Bit Score: 35.14 E-value: 5.88e-04
|
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| LSD1 | TIGR01053 | zinc finger domain, LSD1 subclass; This model describes a putative zinc finger domain found in ... |
45-72 | 4.36e-03 | ||
zinc finger domain, LSD1 subclass; This model describes a putative zinc finger domain found in three closely spaced copies in Arabidopsis protein LSD1 and in two copies in other proteins from the same species. The motif resembles CxxCRxxLMYxxGASxVxCxxC Pssm-ID: 130125 Cd Length: 31 Bit Score: 33.20 E-value: 4.36e-03
|
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| Name | Accession | Description | Interval | E-value | ||
| zf-LSD1 | pfam06943 | LSD1 zinc finger; This family consists of several plant specific LSD1 zinc finger domains. ... |
85-107 | 2.93e-05 | ||
LSD1 zinc finger; This family consists of several plant specific LSD1 zinc finger domains. Arabidopsis lsd1 mutants are hyper-responsive to cell death initiators and fail to limit the extent of cell death. Superoxide is a necessary and sufficient signal for cell death propagation. LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. LSD1 protein contains three zinc finger domains, defined by CxxCxRxxLMYxxGASxVxCxxC. It has been suggested that LSD1 defines a zinc finger protein subclass and that LSD1 regulates transcription, via either repression of a pro-death pathway or activation of an anti-death pathway, in response to signals emanating from cells undergoing pathogen-induced hypersensitive cell death. Pssm-ID: 462045 Cd Length: 23 Bit Score: 38.61 E-value: 2.93e-05
|
||||||
| LSD1 | TIGR01053 | zinc finger domain, LSD1 subclass; This model describes a putative zinc finger domain found in ... |
82-112 | 3.09e-04 | ||
zinc finger domain, LSD1 subclass; This model describes a putative zinc finger domain found in three closely spaced copies in Arabidopsis protein LSD1 and in two copies in other proteins from the same species. The motif resembles CxxCRxxLMYxxGASxVxCxxC Pssm-ID: 130125 Cd Length: 31 Bit Score: 36.28 E-value: 3.09e-04
|
||||||
| zf-LSD1 | pfam06943 | LSD1 zinc finger; This family consists of several plant specific LSD1 zinc finger domains. ... |
47-69 | 5.88e-04 | ||
LSD1 zinc finger; This family consists of several plant specific LSD1 zinc finger domains. Arabidopsis lsd1 mutants are hyper-responsive to cell death initiators and fail to limit the extent of cell death. Superoxide is a necessary and sufficient signal for cell death propagation. LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. LSD1 protein contains three zinc finger domains, defined by CxxCxRxxLMYxxGASxVxCxxC. It has been suggested that LSD1 defines a zinc finger protein subclass and that LSD1 regulates transcription, via either repression of a pro-death pathway or activation of an anti-death pathway, in response to signals emanating from cells undergoing pathogen-induced hypersensitive cell death. Pssm-ID: 462045 Cd Length: 23 Bit Score: 35.14 E-value: 5.88e-04
|
||||||
| LSD1 | TIGR01053 | zinc finger domain, LSD1 subclass; This model describes a putative zinc finger domain found in ... |
45-72 | 4.36e-03 | ||
zinc finger domain, LSD1 subclass; This model describes a putative zinc finger domain found in three closely spaced copies in Arabidopsis protein LSD1 and in two copies in other proteins from the same species. The motif resembles CxxCRxxLMYxxGASxVxCxxC Pssm-ID: 130125 Cd Length: 31 Bit Score: 33.20 E-value: 4.36e-03
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| Blast search parameters | ||||
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