|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 723.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00100 13 IINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00100 93 CLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00100 173 ATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGD 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00100 253 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADL 332
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00100 333 LTLTWIGGQPVEHPFIIIGQLASILYFLIILI 364
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
4-352 |
1.65e-129 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 376.05 E-value: 1.65e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 4 HSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLF 83
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 84 LHVGRGMYYGSYTF---LeTWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:COG1290 105 LHMFRGFFYGAYKKpreL-NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGD 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFH-FILPFIILALVIVHLLFLHETGSNNPTG----LNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFP 235
Cdd:COG1290 184 ATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 236 DllGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILF 313
Cdd:COG1290 264 I--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALG 341
|
330 340 350
....*....|....*....|....*....|....*....
gi 749403466 314 WILVANLFILTWIGGQPVehPFIIIGQLASISYFSIILI 352
Cdd:COG1290 342 VAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-194 |
5.16e-94 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 278.48 E-value: 5.16e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:cd00284 5 EVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSY--TFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSV 158
Cdd:cd00284 85 MLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSV 164
|
170 180 190
....*....|....*....|....*....|....*.
gi 749403466 159 DKATLTRFFAFHFILPFIILALVIVHLLFLHETGSN 194
Cdd:cd00284 165 DNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
6-192 |
1.07e-85 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 256.93 E-value: 1.07e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 6 FIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLH 85
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 86 VGRGMYYG--SYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 163
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 749403466 164 TRFFAFHFILPFIILALVIVHLLFLHETG 192
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
217-327 |
4.39e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 52.11 E-value: 4.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 217 ILGLFIMILLLMTLVlffPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLH 296
Cdd:TIGR01156 44 ILGTIACVVGLAVLD---PAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115
|
90 100 110
....*....|....*....|....*....|..
gi 749403466 297 TSKQRSLTF-RPITQILFwiLVANLFILtWIG 327
Cdd:TIGR01156 116 NVNKFQNPFrRPVATTVF--LFGTVVAL-WLG 144
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 723.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00100 13 IINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00100 93 CLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00100 173 ATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGD 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00100 253 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADL 332
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00100 333 LTLTWIGGQPVEHPFIIIGQLASILYFLIILI 364
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 658.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00119 14 IINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00119 94 CIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00119 174 PTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00119 254 PENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANL 333
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00119 334 LILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 649.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00131 13 IANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00131 93 CIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDN 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00131 173 ATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGD 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00131 253 PDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADV 332
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00131 333 LILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 632.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00074 14 IINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00074 94 CIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDK 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00074 174 ATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00074 254 PDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANT 333
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00074 334 LILTWIGGQPVEDPFIEIGQAASILYFLLFII 365
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 618.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00191 10 IVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00191 90 CIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDN 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00191 170 ATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGD 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00191 250 PENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANF 329
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00191 330 ILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 607.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00156 3 IINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00156 83 CIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDN 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00156 163 ATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGD 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00156 243 PENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIV 322
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00156 323 ILLTWIGARPVEEPYILTGQILTILYFLYFII 354
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 578.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00145 14 VVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00145 94 CIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00145 174 ATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00145 254 PENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNF 333
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00145 334 FILTWIGACPVEEPYETIGQVFTVLYFLFFLI 365
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-352 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 567.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00034 13 ILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00034 93 CLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDN 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00034 173 ATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALND 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00034 253 PENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATF 332
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00034 333 FILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-352 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 545.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00016 14 IMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFI 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00016 94 CLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00016 174 ATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00016 254 PENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNF 333
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00016 334 LLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMI 365
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-352 |
1.12e-174 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 490.20 E-value: 1.12e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00224 14 ILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00224 94 FIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00224 174 ATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00224 254 PENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSW 333
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00224 334 AILTWIGGRPVEDPFEGIGQVFTILYFSYFII 365
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-352 |
5.71e-174 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 488.06 E-value: 5.71e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00022 12 IVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00022 92 CLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00022 172 ATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGD 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00022 252 PENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDF 331
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00022 332 ILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-352 |
4.99e-173 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 485.75 E-value: 4.99e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00053 14 LVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00053 94 CVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGD 240
Cdd:MTH00053 174 ATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 241 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANL 320
Cdd:MTH00053 254 AENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDF 333
|
330 340 350
....*....|....*....|....*....|..
gi 749403466 321 FILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00053 334 FLLTWIGGQPVEEPYILIGQIASIFYFAYFLI 365
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
7-352 |
3.32e-133 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 385.06 E-value: 3.32e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 7 IDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHV 86
Cdd:MTH00033 16 IDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 87 GRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRF 166
Cdd:MTH00033 96 GRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 167 FAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVL--FFPDLLGDPDNY 244
Cdd:MTH00033 176 FSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIepRIETLLQDPENF 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 245 TPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANLFILT 324
Cdd:MTH00033 256 IQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILT 335
|
330 340
....*....|....*....|....*....
gi 749403466 325 WIGGQPV-EHPFIIIGQLASISYFSIILI 352
Cdd:MTH00033 336 WIGSAPAgADPYVLIGRIATIFYFGYFLV 364
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
4-352 |
1.65e-129 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 376.05 E-value: 1.65e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 4 HSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLF 83
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 84 LHVGRGMYYGSYTF---LeTWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:COG1290 105 LHMFRGFFYGAYKKpreL-NWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGD 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFH-FILPFIILALVIVHLLFLHETGSNNPTG----LNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFP 235
Cdd:COG1290 184 ATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFP 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 236 DllGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILF 313
Cdd:COG1290 264 I--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALG 341
|
330 340 350
....*....|....*....|....*....|....*....
gi 749403466 314 WILVANLFILTWIGGQPVehPFIIIGQLASISYFSIILI 352
Cdd:COG1290 342 VAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLI 378
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
7-352 |
1.21e-117 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 344.23 E-value: 1.21e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 7 IDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHV 86
Cdd:MTH00086 8 VTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHI 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 87 GRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRF 166
Cdd:MTH00086 88 FKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFF 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 167 FAFHFILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLfIMILLLMTLVLFFPDLLGDPDNYTP 246
Cdd:MTH00086 168 FVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLGDPEMFIE 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 247 ANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQrslTFRPITQILFWILVANLFILTWI 326
Cdd:MTH00086 247 ADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVVNVILSWL 323
|
330 340
....*....|....*....|....*.
gi 749403466 327 GGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00086 324 GQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-194 |
5.16e-94 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 278.48 E-value: 5.16e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:cd00284 5 EVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSY--TFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSV 158
Cdd:cd00284 85 MLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSV 164
|
170 180 190
....*....|....*....|....*....|....*.
gi 749403466 159 DKATLTRFFAFHFILPFIILALVIVHLLFLHETGSN 194
Cdd:cd00284 165 DNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-352 |
2.24e-91 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 277.25 E-value: 2.24e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 1 IINHSFIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFI 80
Cdd:MTH00046 4 LIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 81 CLFLHVGRGMYYGSYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDK 160
Cdd:MTH00046 84 LLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 161 ATLTRFFAFHFILPFIILALVIVHLLFLHETGSNNPTGL-NSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLG 239
Cdd:MTH00046 164 VTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 240 DPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALlpflhTSKQRSLTFRPITQILFWILVAN 319
Cdd:MTH00046 244 DIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLVLVLSFLFFLWV-----PTFNGSSVYSVWRQVNFWLIVSL 318
|
330 340 350
....*....|....*....|....*....|...
gi 749403466 320 LFILTWIGGQPVEHPFIIIGQLASISYFSIILI 352
Cdd:MTH00046 319 FFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
6-192 |
1.07e-85 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 256.93 E-value: 1.07e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 6 FIDLPAPSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLH 85
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 86 VGRGMYYG--SYTFLETWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 163
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 749403466 164 TRFFAFHFILPFIILALVIVHLLFLHETG 192
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
195-342 |
5.79e-52 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 168.98 E-value: 5.79e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 195 NPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPN 274
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 749403466 275 KLGGVLALILSILILALLPFLHTSKQRSlTFRPITQILFWILVANLFILTWIGGQPVEHPFIIIGQLA 342
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
76-241 |
9.94e-47 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 156.25 E-value: 9.94e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 76 SMFFICLFLHVGRGMYYGSYTFLE--TWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 153
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 154 GGFSVDKATLTRFFAFHF-ILPFIILALVIVHLLFLHETGSNNPTGLNSDSDKIPFHPYYTIKEILGLFIMILLLMTLVL 232
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 749403466 233 FFPDLLGDP 241
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
246-346 |
4.55e-41 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 139.15 E-value: 4.55e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 246 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSLTFRPITQILFWILVANLFILTW 325
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 749403466 326 IGGQPVEHPFIIIGQLASISY 346
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
21-196 |
5.52e-41 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 143.31 E-value: 5.52e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 21 FGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMYYGSYTFLE- 99
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 100 -TWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFH-FILPFII 177
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170
....*....|....*....
gi 749403466 178 LALVIVHLLFLHETGSNNP 196
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
|
|
| petB |
CHL00070 |
cytochrome b6 |
12-196 |
5.21e-35 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 127.14 E-value: 5.21e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 12 PSNISSWWNFGSLLGICLMVQIITGLFLAMHYTSDTTTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGMY 91
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 92 YGSYTFLE--TWNIGVILMFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAF 169
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 749403466 170 H-FILPFIILALVIVHLLFLHETGSNNP 196
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
224-327 |
8.10e-09 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 54.03 E-value: 8.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 224 ILLLMTLVLFFPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLHTSKQRSL 303
Cdd:COG5679 49 IALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQN 123
|
90 100
....*....|....*....|....*
gi 749403466 304 TF-RPITQILFwiLVANLFILtWIG 327
Cdd:COG5679 124 PFrRPVATAVF--LFGTLVTL-WLG 145
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
217-315 |
2.24e-08 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 52.70 E-value: 2.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 217 ILGLFIMILLLMTLVlffPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLH 296
Cdd:CHL00058 44 ILGTIACNVGLAVLE---PSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLE 115
|
90 100
....*....|....*....|
gi 749403466 297 TSKQRSLTF-RPITQILFWI 315
Cdd:CHL00058 116 NVNKFQNPFrRPVATTVFLI 135
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
217-327 |
4.39e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 52.11 E-value: 4.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749403466 217 ILGLFIMILLLMTLVlffPDLLGDPdnytpANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALLPFLH 296
Cdd:TIGR01156 44 ILGTIACVVGLAVLD---PAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115
|
90 100 110
....*....|....*....|....*....|..
gi 749403466 297 TSKQRSLTF-RPITQILFwiLVANLFILtWIG 327
Cdd:TIGR01156 116 NVNKFQNPFrRPVATTVF--LFGTVVAL-WLG 144
|
|
|