|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-571 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 708.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 1 MCTISFVSLFFFSLSSFMMGIIFIMNDYSIFIEWEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDY 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 81 KINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 161 SWNYVFYLEVMKSDFEMLMIGGLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWM 240
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 241 GNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNS 320
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 321 QDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTG 400
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 401 TSNFSSLNMLNDEGWVMLKSMMGLLILSIFGGSMLSWLIFPSPMVVVLPSYLKLLTLFVCISGGLMGYLISYVSLFFFNK 480
Cdd:MTH00165 403 DFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 481 ALNNYNSSYFLGSMWFMPYISTYGIMNYSLIVGKMAVKSFDQGWSEYFGGQQLYYNLVKNSQLNQMMQNNNLKVYLLSFI 560
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
570
....*....|.
gi 749111681 561 LWIVILYMYMI 571
Cdd:MTH00165 563 LWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
18-570 |
2.96e-175 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 507.46 E-value: 2.96e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 18 MMGIIFIMNDYSIFIEWEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMM 97
Cdd:MTH00151 20 PLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMN 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 98 LLIISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVFYLEVMKSDFEM 177
Cdd:MTH00151 100 LLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILSMWDFKLSGWLG 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 178 LmiggLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NIVLSSSWMGNLLLLISGLTMFMAG 256
Cdd:MTH00151 180 L----LLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFfPFLSSSSGFSSFLLFISLLTLLMAG 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 257 LGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLT 336
Cdd:MTH00151 256 ISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLT 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 337 SSCFNVANLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDEGWV 416
Cdd:MTH00151 336 SGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFY 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 417 MLKSMMGLLILSIFGGSMLSWLIFPSPMVVVLPSYLKLLTLFVCIsgglMGYLISYVSLFFFNKALNNYNSSYFLGSMWF 496
Cdd:MTH00151 416 VSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVIL----LGLFLSFGFWDSGFSSSKMVKLSFFFSSMWF 491
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 749111681 497 MPYISTYGIMNYSLIVGKMAVKSFDQGWSEYFGGQQLYYNLVKNSQLNQMMQNNNLKVYLLSFILWIVILYMYM 570
Cdd:MTH00151 492 LSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
18-570 |
1.76e-172 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 500.33 E-value: 1.76e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 18 MMGIIFIMNDYSIFIEWEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMM 97
Cdd:MTH00209 18 LMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMN 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 98 LLIISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNyVFYLEVMKSdfEM 177
Cdd:MTH00209 98 FLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNSN--LG 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 178 LMIGGLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWM-GNLLLLISGLTMFMAG 256
Cdd:MTH00209 175 SVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFfSMSLLLLGSLTTLMAS 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 257 LGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLT 336
Cdd:MTH00209 255 MSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPIT 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 337 SSCFNVANLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDEGWV 416
Cdd:MTH00209 335 SICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKL 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 417 MLKSMMGLLILSIFGGSMLSWLIFPSPMVVVLPSYLKLLTLFVCISGGLMGYLISYVSLFFFNKalnnYNSSYFLGSMWF 496
Cdd:MTH00209 415 NLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKG----YKVNYFLSQMWF 490
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 749111681 497 MPYISTYGIMNYSLIVGKMAVKSFDQGWSEYFGGQQLYYNLVKNSQLNQMMQNNNLKVYLLSFILWIVILYMYM 570
Cdd:MTH00209 491 LPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVILFM 564
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
25-568 |
2.51e-161 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 472.33 E-value: 2.51e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 25 MNDYSIFIEWEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPN 104
Cdd:MTH00207 30 MCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 105 LISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVFYLEVMKSDFEMLMIgglv 184
Cdd:MTH00207 110 LMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMWQTDMNNYIALSI---- 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 185 MLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSS-SWMGNLLLLISGLTMFMAGLGANYEF 263
Cdd:MTH00207 186 MIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSStYWFNPALLLTASLTMLMAGLSAMTEC 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 264 DLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVA 343
Cdd:MTH00207 266 DMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIA 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 344 NLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDEGWVMLKSMMG 423
Cdd:MTH00207 346 NLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLL 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 424 LLILSIFGGSMLSWLIFPSPMVVVLPSYLKLLTLFVCISGGLMGYLISYVSLFFFNKALNNYNSSYFLGSMWFMPYISTY 503
Cdd:MTH00207 426 LTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLSHFASCLMWFLVPLSSQ 505
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 749111681 504 GIMNYSLIVGKMAVKSFDQGWSEYFGGQQLYYNLVKNSQLNQMMQNNNLKVYL-LSFILWIVILYM 568
Cdd:MTH00207 506 FIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLmMSFVLLTIIIIM 571
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
18-573 |
3.57e-122 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 372.75 E-value: 3.57e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 18 MMGIIFIMNDYSIFIEWEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMM 97
Cdd:MTH00211 45 PLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFML 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 98 LLIISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTAL-SNRIGDVALLLAIAWML-NYGSWNYVFYLEVMKSDF 175
Cdd:MTH00211 125 ILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQLFILNLDLT 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 176 EMLMiggLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-IVLSSSWMGNLLLLISGLTMFM 254
Cdd:MTH00211 205 LFLL---GLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSpLFQNNQLILGAVLLLGALTMLF 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 255 AGLGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMP 334
Cdd:MTH00211 282 GALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLP 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 335 LTSSCFNVANLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDEG 414
Cdd:MTH00211 362 FTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENY 441
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 415 WVMLKSMMGLLILSIFGGSMLSWLIFPS-PMVVVLPSYLKLLTLFVCISGGLMGYLISYVSLFFFNKalnnyNSSYFLGS 493
Cdd:MTH00211 442 KLLKNPLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKT-----STLSFSNM 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 494 MWFMPYISTYGIMNYSLIVGK-MAVKSFDQGWSEYFGGQQLYYNLVKNSQLNQMMQNNNLKVYLLSFILWIVILYMYMIC 572
Cdd:MTH00211 517 LGYYPPIIHRLLPKLSLKWGQtLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFLL 596
|
.
gi 749111681 573 F 573
Cdd:MTH00211 597 F 597
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
21-570 |
1.92e-115 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 355.24 E-value: 1.92e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 21 IIFIMND-YSIFIEWEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLL 99
Cdd:MTH00004 52 TLFLNSGtESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLIL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 100 IISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTA-LSNRIGDVALLLAIAWM-LNYGSWNyvFYLEVMKSDFEM 177
Cdd:MTH00004 132 ITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWE--IQQLFSPTQTPT 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 178 LMIGGLvMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSS-WMGNLLLLISGLTMFMAG 256
Cdd:MTH00004 210 LPLLGL-ILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNqTALTICLCLGALTTLFAA 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 257 LGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLT 336
Cdd:MTH00004 289 TCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPIT 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 337 SSCFNVANLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDEGWV 416
Cdd:MTH00004 369 SSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPT 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 417 MLKSMMGLLILSIFGGSMLSWLIFPS-PMVVVLPSYLKLLTLFVCISGGLMGYLISYVSLFFFNKALNNYNSsyFLGSMW 495
Cdd:MTH00004 449 IINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHN--FSNQLA 526
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 749111681 496 FMPYISTYGIMNYSLIVG-KMAVKSFDQGWSEYFGGQQLYYNLVKNSQLNQMMQNNNLKVYLLSFILWIVILYMYM 570
Cdd:MTH00004 527 FFNPLTHRLLPMTLLKSSqKIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFALTILLLLLLT 602
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
21-566 |
6.02e-111 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 344.65 E-value: 6.02e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 21 IIFIMND----YSIFIEWevVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSM 96
Cdd:MTH00208 74 LIWILLGcpniNISLSNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNM 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 97 MLLIISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTA-LSNRIGDVALLLAIAW-MLNYGSWNY--VFYLEVMK 172
Cdd:MTH00208 152 LILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLneILSLNNSN 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 173 SDFEMLMIGGLVmLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NIVLSSSWMGNLLLLISGLT 251
Cdd:MTH00208 232 SFLINILLFGIL-LAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTsPLISNSPWFLSLCLILGSLT 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 252 MFMAGLGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSL 331
Cdd:MTH00208 311 ALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSF 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 332 MMPLTSSCFNVANLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLN 411
Cdd:MTH00208 391 LLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPIS 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 412 DEGWVMLKSMMGLLILSIFGGSMLSWLIFPSPMVVVlPSYLKLLTLFVCISgglmGYLISYVSLFFFNKALNNYNSSYFL 491
Cdd:MTH00208 471 EENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLTL-PLILKSLPLIVTII----GAAFSFSFLLSLSSNPINSNFFSFL 545
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 749111681 492 GSMWFMPYISTYGIMNYSLIVG-KMAVKSFDQGWSEYFGGQQLYYNLVKNSQLNQMMQNNNLKVYLLSFILWIVIL 566
Cdd:MTH00208 546 SNQWFFVNISHSIIISFSFFTSlFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLI 621
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
24-566 |
6.48e-108 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 335.97 E-value: 6.48e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 24 IMNDYSIFIEWEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISP 103
Cdd:COG1009 52 VLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 104 NLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTA-LSNRIGDVALLLAIAWMLNY-GSWNY--VF-YLEVMKSDFEML 178
Cdd:COG1009 132 NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAIaGTLNFseLLaAAPTILSSPLLT 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 179 MIGGLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSS--WMgNLLLLISGLTMFMAG 256
Cdd:COG1009 212 LILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSpvWL-TVVAIIGAITALFAA 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 257 LGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSLMMPLT 336
Cdd:COG1009 291 LIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPIT 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 337 SSCFNVANLALCGMPFLAGFYSKDLILE-VVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDEGW 415
Cdd:COG1009 370 AITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPW 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 416 VMLKSMMGLLILSIFGGSMLSWL---------IFPSPMVVVLPSYLKLLTLFVCISGGLMGYLIsYVSLFFFNKALNNYN 486
Cdd:COG1009 450 LMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL-YLKRPLPALAERLKP 528
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 487 SSYFLGSMWFMPYISTYGIMNYSLIVGKMAVksFDQ----------GWSEYFGGQQLYYnlvknsqlnqmMQNNNLKVYL 556
Cdd:COG1009 529 LYRLLANKWYFDELYDALFVKPVRALARFLW--FDRyvidgivnglARLTLFSGRLLRR-----------LQTGYLQFYA 595
|
570
....*....|
gi 749111681 557 LSFILWIVIL 566
Cdd:COG1009 596 LTILLGVVVL 605
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
29-570 |
6.75e-107 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 333.03 E-value: 6.75e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 29 SIFIEWEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISI 108
Cdd:MTH00066 59 SITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 109 LLGWDGLGLVSYCLV-IYFQNVKSYNAGMLTALSNRIGDVALLLAIAW-MLNYGSW--NYVFylevMKSDFEMLMIGGLV 184
Cdd:MTH00066 139 FIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWelQQIF----LLNDNSTLPLLGLI 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 185 mLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMG-NLLLLISGLTMFMAGLGANYEF 263
Cdd:MTH00066 215 -LAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTAlTICLCLGALTTLFTAACALTQN 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 264 DLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVA 343
Cdd:MTH00066 294 DIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIG 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 344 NLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDEGWVMLKSMMG 423
Cdd:MTH00066 374 SLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKR 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 424 LLILSIFGGSMLSWLIFPS-PMVVVLPSYLKLLTLFVCISGGLMGYLISYVSlfffNKALNNYNSSYFLGSMWFMPYIST 502
Cdd:MTH00066 454 LAWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKIT----SKTTPKTKMHSFSNLLAFFPTIIH 529
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 749111681 503 YGIMNYSLIVG-KMAVKSFDQGWSEYFGGQQLYYNLVKNSQLNQMMQNNNLKVYLLSFILWIVILYMYM 570
Cdd:MTH00066 530 RLSPKTNLNSGqNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLILL 598
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
21-570 |
4.11e-105 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 328.74 E-value: 4.11e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 21 IIFIMNDY-SIFIEWEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLL 99
Cdd:MTH00108 52 MMFIHSGQeMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLIL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 100 IISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTA-LSNRIGDVALLLAIAW-MLNYGSWNY--VFyleVMKSDF 175
Cdd:MTH00108 132 VTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWDLqqIF---MLNPNN 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 176 EMLMIGGLVmLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMGNLLLLISG--LTMF 253
Cdd:MTH00108 209 SNLPLMGLL-LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGaiTTLF 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 254 MAgLGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMM 333
Cdd:MTH00108 288 TA-ICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTL 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 334 PLTSSCFNVANLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDE 413
Cdd:MTH00108 367 PFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINEN 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 414 GWVMLKSMMGLLILSIFGGSMLSWLIFPSPMVVV-LPSYLKLLTLFVCISGGLMGYLISYVSLFF-FNKALNNYNSSYFL 491
Cdd:MTH00108 447 NPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQMtMPLYLKLTALAVTILGFILALELNLLTNNLkFKYPSNTFKFSNML 526
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 492 GsmwFMPYISTYGIMNYSLIVG-KMAVKSFDQGWSEYFGGQQLyynlvknSQLNQMM------QNNNLKVYLLSFILWIV 564
Cdd:MTH00108 527 G---YFPTIMHRLPPYMNLTMSqKLASMLLDLIWLEKILPKTI-------SLIQMKAsttisnQKGLIKLYFLSFLITLT 596
|
....*.
gi 749111681 565 ILYMYM 570
Cdd:MTH00108 597 LSLLLF 602
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
34-561 |
7.34e-96 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 304.98 E-value: 7.34e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 34 WEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWD 113
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 114 GLGLVSYCLV-IYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNY-GSWNY--VFYLEVMKSDFEMLMIGGLVMLAAM 189
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYfGTLNFqeVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-IVLSSSWMGNLLLLISGLTMFMAGLGANYEFDLKKI 268
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSpLFELSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 269 IALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVANLALC 348
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 349 GMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDEGWVMLKSMMGLLILS 428
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 429 IFGGSMLSWLIFP-----------SPMVVVLPSYLKLLTLFVCISGGLMGYLISYVSLFFFNKALNNYNSSY-FLGSMWF 496
Cdd:TIGR01974 465 VFAGFFIVPLFEFlkgvlptsaepALEHHHVPALEIWSPTAVAILGILLAYLLYLGNPTLPAKIAQRHSGLYrLLLNKWY 544
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 749111681 497 MPYISTYGIMNYSLIVGKMAVKSFDQGWSEYFGGQQLYYNLVKNSQLnQMMQNNNLKVYLLSFIL 561
Cdd:TIGR01974 545 FDELYDKVFVKPYLFLGKLLWKDPDDKIIDGFGPGIARLVGAISKRL-RKSQTGYLRWYAASMVV 608
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
34-470 |
8.03e-93 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 297.07 E-value: 8.03e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 34 WEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWD 113
Cdd:PRK06590 66 WTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 114 GLGLVSYCLV-IYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNY-GSWNY--VFYLEVMKSDFEMLM---IGGLVML 186
Cdd:PRK06590 146 GVGLCSYLLIgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEfGSLNYdeVFAAAPQFFGLGWSAltlICLLLFI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 187 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-IVLSSSWMGNLLLLISGLTMFMAGLGANYEFDL 265
Cdd:PRK06590 226 GAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSpLFELSPEALLFVAIVGAVTALFAAFIGLVQTDI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 266 KKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVANL 345
Cdd:PRK06590 306 KRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTL 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 346 ALCGMPFLAGFYSKDLILEVVsLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNfsslnmLNDE-----GWVMLKS 420
Cdd:PRK06590 386 ALIGIPPFAGFFSKDEILEAA-FANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEK------EKIHhphesPAVMTLP 458
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 421 MMGLLILSIFGG-----SMLSWLIFPSPMV-----VVLPSYLKLLTLFVCISGGLMGYLI 470
Cdd:PRK06590 459 LIVLAVLSVFAGalivpPFLGVLPLTTELAhgeaeHHLPVWVALLPLVVALAGIALAWLL 518
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
29-561 |
2.42e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 292.89 E-value: 2.42e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 29 SIFIEWEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISI 108
Cdd:MTH00137 65 TIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 109 LLGWDGLGLVSYCLVIYFQNVKSYNAGMLTA-LSNRIGDVALLLAIAWML-NYGSWNY--VFYLEvmkSDFEM---LMig 181
Cdd:MTH00137 145 FIGWEGVGIMSFLLIGWWYGRADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWEIqqIFALS---KDFDLtlpLL-- 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 182 GLVmLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMGNLLLLISG--LTMFMA--GL 257
Cdd:MTH00137 220 GLI-LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGalTTLFTAtcAL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 258 GANyefDLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLTS 337
Cdd:MTH00137 299 TQN---DIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTS 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 338 SCFNVANLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDEGWVM 417
Cdd:MTH00137 376 SCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAV 455
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 418 LKSMMGLLILSIFGGSMLSWLIFPSPM-VVVLPSYLKLLTLFVCISGGLMGY-LISYVSLFFfnKALNNYNSSYFLGSMW 495
Cdd:MTH00137 456 INPIKRLAWGSIIAGLLITSNILPLKTpVMTMPPLLKLAALIVTILGLLIALeLASLTNKQF--KPTPTLPPHHFSNMLG 533
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 749111681 496 FMPYISTYGIMNYSLIVG-KMAVKSFDQGWSEYFGGQQLYYNLVKNSQLNQMMQNNNLKVYLLSFIL 561
Cdd:MTH00137 534 FFPAIIHRLTPKLNLTLGqTIATQMVDQTWLEKTGPKGIASLQLPLITTTSNIQQGMIKTYLTLFLL 600
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
48-566 |
1.01e-82 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 270.41 E-value: 1.01e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 48 LLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLV-IYF 126
Cdd:MTH00020 76 LQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 127 QNVKSYNAGMLTALSNRIGDVALLLAIAWMLN-YGSWNY--VFYLEVMKSDFEMLMIGGLVMLAAMTKSAQIPFSSWLPA 203
Cdd:MTH00020 156 TRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFssVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPD 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 204 AMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMGNLLLLISG-LTMFMAGLGANYEFDLKKIIALSTLSQLGLMMS 282
Cdd:MTH00020 236 AMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGsLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 283 ILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDLI 362
Cdd:MTH00020 316 ACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLI 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 363 LEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFS--SLNMLNDEGWVMLKSMMGLLILSIFGGSMLSWLIF 440
Cdd:MTH00020 396 LELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKkaVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIW 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 441 PSPMVV--VLPSYLKLLTLFVCISGGLMGYLISYVSLFFFNKALNNY--NSSYFLGSMWFMPYISTYGIMNYSLIVG-KM 515
Cdd:MTH00020 476 SFQITLppIVPLSIKLLPVFLSLGGIGLVIILYFYSSKTFRVPFSFIgrNSYTFLGSAWQFNYILNYFLIKKIWKGGhLI 555
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 749111681 516 AVKSFDQGWSEYFGGQQLYYNLVKNSQLNQMMQNNNLKVYLLSFILWIVIL 566
Cdd:MTH00020 556 SYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIF 606
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
48-569 |
1.83e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 267.26 E-value: 1.83e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 48 LLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLV-IYF 126
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 127 QNVKSYNAGMLTALSNRIGDVALLLAIAWMLN-YGSWNY--VFYLEVMKSDFEML-MIGGLVMLAAMTKSAQIPFSSWLP 202
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFstISSLLVTNINKESLtIICLLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 203 AAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMGNLLLLISG-LTMFMAGLGANYEFDLKKIIALSTLSQLGLMM 281
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGaLTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 282 SILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDL 361
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 362 ILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLN--DEGWVMLKSMMGLLILSIFGGSMLSWLI 439
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLLAFGSIFVGYLGKEVV 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 440 FPSPMVVVLPSYLKLLTLFVCISGGLMGYLISYVSLFFFNKA-----LNNYNSSY-FLGSMWFMPYISTYGIMNYSLIVG 513
Cdd:MTH00210 476 LSNVIPPIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISrrgvsIRLYHVIYtFLNSAWQFNYVINHFIVKNIWKFG 555
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 749111681 514 -KMAVKSFDQGWSEYFGGQQLYYNLVKNSQLNQMMQNNNLKVYLLSFIlWIVILYMY 569
Cdd:MTH00210 556 hLITYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMI-IFTTLFIS 611
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
28-400 |
1.77e-65 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 226.06 E-value: 1.77e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 28 YSIFIEWevVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLIS 107
Cdd:PRK07376 69 YERLFEW--ASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQ 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 108 ILLGWDGLGLVSYCLVIYFQNVKSY-NAGMLTALSNRIGDVALLLAIA---WMLNygswnyVFYLEVMKSDFEMLMIGG- 182
Cdd:PRK07376 147 IYVFWELVGMCSYLLVGFWYDRKGAaDAAQKAFVVNRVGDFGLLLGILglfWATG------SFDFDGIADRLSELVSSGa 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 183 -----------LVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSS-SWMGNLLLLISGL 250
Cdd:PRK07376 221 vsgwlalllciLVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQfPAVMTVIAWTGAI 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 251 TMFMAGLGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNN--------SQD 322
Cdd:PRK07376 301 TAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQD 380
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 749111681 323 IRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDLILEVVSLSyiNMFSFFLYFFSTGLTVCYSFRLVYYTMTG 400
Cdd:PRK07376 381 MRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEG 456
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
46-497 |
1.69e-63 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 217.09 E-value: 1.69e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 46 MTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:MTH00095 39 LKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLF 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 126 FQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYGswnYVFYLEVMKSDFEMLMIgglvMLAAMTKSAQIPFSSWLPAAM 205
Cdd:MTH00095 119 YNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS---YYFFSFSFFSSSMILML----LLTSFTKSAQFPFSSWLPKAM 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 206 AAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMMSILS 285
Cdd:MTH00095 192 SAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFG 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 286 MGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDLILEV 365
Cdd:MTH00095 272 SGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILEL 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 366 VSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTgtsNFSSLNMLNDEGWVMLKSMMGLLILSIFGgsmLSWLIFPSPMV 445
Cdd:MTH00095 352 FFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFL---SFSKVVNVYSSSVLMNFLSLMLVFFSVFF---LWWLNFNLLNL 425
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 749111681 446 VVLPSYLKLLTLFVCIsgGLMGYLISYVSLFFFNKALNNYNSSYFLGSMWFM 497
Cdd:MTH00095 426 PSLFLYLDFYVPLFYL--FMIMLFSFFFFKLLFKELKYKFFVDYFAKNVIYK 475
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
48-566 |
3.32e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 214.44 E-value: 3.32e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 48 LLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQ 127
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 128 N-VKSYNAGMLTALSNRIGDVALLLAIAWM------LNYGSWNYVFYLE-VMKSDFE-----------MLMIGGLVMLAA 188
Cdd:MTH00032 156 TrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNGGSVGSgIMDRGYYgggayesplapFAIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 189 MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMGNLLLLISG-LTMFMAGLGANYEFDLKK 267
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGaLTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 268 IIALSTLSQLGLMMSILSM-GYYKLAFFHLLTHALFKALLFMCAGAIIHNMN-NSQDIRLMGGLSLMMPLTSSCFNVANL 345
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 346 ALCGMPFLAGFYSKDLILEvVSLSYINM-------------------------------------FSFFLYFFSTGLTVC 388
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILE-LTYSGRNMgipfgssllkiqgdigikkddrgsiggpegypsrgsaFAFWLGTVAALLTAF 474
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 389 YSFRLVYYTMTGTSNFSSLNMLNDEGWVMLKSMMGLLILSIFGGSMLSWLI-----------FPSPMVVVLPSYLKLLTL 457
Cdd:MTH00032 475 YSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIqdiligdiehpIVPPLIKVMPTLMGLFGM 554
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 458 FVCISGGLMGYLISYVSLFFFNKALNNYNSSYFLGSMWFMPYISTYGIMNYSLIVGKMAV-KSFDQGWSEYFGGQQLYYN 536
Cdd:MTH00032 555 GLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIyKTLDRGWLELFGPQGISTI 634
|
570 580 590
....*....|....*....|....*....|
gi 749111681 537 LVKNSQLNQMMQNNNLKVYLLSFILWIVIL 566
Cdd:MTH00032 635 ALRVSQFISNLQSGVISRYALVLLSFTIIF 664
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
102-382 |
3.25e-60 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 201.39 E-value: 3.25e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 102 SPNLISILLGWDGLGLVSYCLVIYF-QNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVFYL----EVMKSDFE 176
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskalTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 177 MLMIGGLVMLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNIVL--SSSWMGNLLLLISGLTMF 253
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlpSSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 254 MAGLGANYEFDLKKIIALSTLSQLGLMMSILSMGY---YKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLS 330
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 749111681 331 LMMPLTSSCFNVANLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFS 382
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
67-428 |
3.82e-53 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 193.18 E-value: 3.82e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 67 LVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLV-IYFQNVKSYNAGMLTALSNRIG 145
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 146 DVALLLAIA---WMLNYGSWNYVF-YLEVMKSDFEML-----MIGGLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVH 216
Cdd:CHL00025 186 DFGLLLGILgfyWITGSFEFRDLFeIFNNLIYNNEVNllfatLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIH 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 217 SSTLVTAGVYLLIR-FNIVLSSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLAFFH 295
Cdd:CHL00025 266 AATMVAAGIFLVARlLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFH 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 296 LLTHALFKALLFMCAGAIIHNM--------NNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDLILevvS 367
Cdd:CHL00025 346 LITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL---N 422
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 749111681 368 LSYINMFSF-FLYFFSTGLTVCYSFR-------------LVYYTMTGTSNFSSLNMLNDEGWVMLKSMMGLLILS 428
Cdd:CHL00025 423 DSWLYSPIFaIIAWSTAGLTAFYMFRiylltfeghlrvhFQNYSGKKNSSFYSISLWGKEESKKINKLLLLLTMN 497
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-397 |
7.58e-51 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 180.73 E-value: 7.58e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 47 TLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYF 126
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 127 QNVKSYNAGMLTALSNRIGDVALLLAIAWM-LNYGSWNYVFYLEVMK--SDFEMLMIGGLVMLAAMTKSAQIPFSSWLPA 203
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAelDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 204 AMA-APTPVSALVhSSTLVTAGVYLLIRFNIVL----SSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLG 278
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLfgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 279 LMMSILSMGYYKL---AFFHLLTHALFKALLFMCAGAIIHnMNNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAG 355
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIER-ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 749111681 356 FYSKDLILEvVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYT 397
Cdd:COG0651 389 FVSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
389-570 |
1.50e-50 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 171.96 E-value: 1.50e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 389 YSFRLVYYTMTGTSNFSSLNMLNDEGWVMLKSMMGLLILSIFGGSMLSWLIFPSPMVVVLPSYLKLLTLFVCISGGLMGY 468
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 469 LISYVSLFFFNKALnNYNSSYFLGSMWFMPYISTYGIMNYSLIVGKMAVKSFDQGWSEYFGGQQLYYNLVKNSQLNQMMQ 548
Cdd:pfam06455 81 ELSNLSNKQLKKSL-NFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|..
gi 749111681 549 NNNLKVYLLSFILWIVILYMYM 570
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
40-394 |
3.11e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 186.40 E-value: 3.11e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 40 NSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVS 119
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 120 YCLVIyfQNVKSYNAG-MLTALSNRIGDVALLLAIAWMLNY-GSWNYVfylEVMKSDF------EMLMIGGLVMLAAMTK 191
Cdd:PRK12650 147 FFLIA--RSGSGGEAGsIRTLILTFFGGLTLLAAVAIAATQtGTTSLS---GILHSDVwaekpgLTTVVAVLIAVAAFTK 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 192 SAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMGNLLLLISGL-TMFMAGLGANYEFDLKKIIA 270
Cdd:PRK12650 222 SAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMiTALMGAVFAVQKTDLKKLTA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 271 LSTLSQLGLMMSILSMGY-YKL--AFFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSLMMPLTSSCFNVANLAL 347
Cdd:PRK12650 302 YSTVSQLGWIVATIGVGTpFALtaAVVHTLAHALFKSSLFMLIGVVDHQA-GTRDIRRLGSLWRRMPFTFVSVTIAALSM 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 749111681 348 CGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGL----TVCYSFRLV 394
Cdd:PRK12650 381 AAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALgavfTFAYSARLV 431
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
41-400 |
1.58e-49 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 183.51 E-value: 1.58e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 41 SMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSY 120
Cdd:TIGR00940 64 ELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSF 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 121 CLVIY-FQNVKSYNAGMLTALSNRIGDVALL------------LAIAWMLNYGS--WNYVFYLEVMKsdfemlmiggLVM 185
Cdd:TIGR00940 144 LLISYwHHRAHSRYGAQKSLTITVFGGLAMLgglillgkitgsFSIDAVIASADaiRNSPLFGTAMV----------LVL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 186 LAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMGNLLLLISGL-TMFMAGLGANYEFD 264
Cdd:TIGR00940 214 LGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLiTLLWGSYFAIFQQD 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 265 LKKIIALSTLSQLGLMMSILSMG------------YYKLAF----FHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGG 328
Cdd:TIGR00940 294 LKGILAFSTISQLGLIMVLLGLGspsyhyqgddskIYALAAvaavFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGG 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 329 LSLMMPLTSSCFNVANLALCGMPFLAGFYSKDLIL-EVVSLSYINMFSF--------FLYFFSTGLTVCYSFRLVYYTMT 399
Cdd:TIGR00940 373 LFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFaEAITAHLVNPFDTvtlgylfpYVATVASVFTFVYSLRFIHGVFF 452
|
.
gi 749111681 400 G 400
Cdd:TIGR00940 453 G 453
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
41-366 |
4.53e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 181.66 E-value: 4.53e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 41 SMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSY 120
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 121 cLVIYF--QNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYG-----SWNYVFYLEVMKSDFeMLMIGGLVMLAAMTKSA 193
Cdd:PRK12647 133 -LLIGFnhEREAARRAALQALLVTGGGGLALLAGLILLGNVTgtyslSELLASGDVIREHPL-YLAILLLVLGGAFTKSA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSS--WMGnLLLLISGLTMFMAGLGANYEFDLKKIIAL 271
Cdd:PRK12647 211 QFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplWQT-ILPLFGGLTMLTGALLAVRQTDLKLILAY 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 272 STLSQLGLMMSILSMGY---YKLAFFHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSLMMPLTSSCFNVANLALC 348
Cdd:PRK12647 290 STVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMA 368
|
330
....*....|....*...
gi 749111681 349 GMPFLAGFYSKDLILEVV 366
Cdd:PRK12647 369 GLPPLFGFLAKELIYEAL 386
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-395 |
9.69e-48 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 179.23 E-value: 9.69e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 47 TLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYF 126
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 127 QNVKSYNAGMLTALS-NRIGDVALL---LAIAWMLnyGSWNYVFYL---EVMKSDFEMLMIGGLVMLAAMTKSAQIPFSS 199
Cdd:PRK12648 151 HHRADARRGARMALTvTGAGGLALLagvLLLGHIV--GSYDLDVVLaagDLIRAHPLYPPALVLILLGAFTKSAQFPFHF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 200 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMGNLLLLISGL-TMFMAGLGANYEFDLKKIIALSTLSQLG 278
Cdd:PRK12648 229 WLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLiTLLLGAYFALFQHDLKGLLAYSTISHLG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 279 LMMSILSMGyYKLA----FFHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLA 354
Cdd:PRK12648 309 LITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLN 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 749111681 355 GFYSKDLIL-EVVSLSYINMFSFFLYFFST---GLTVCYSFRLVY 395
Cdd:PRK12648 387 GFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSLRFIH 431
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
41-400 |
9.78e-45 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 169.72 E-value: 9.78e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 41 SMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDY-KINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVS 119
Cdd:PRK12645 67 SLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 120 YCLVIY-FQNVKSYNAGMLTALSNRIGDVALLLAIAWM-LNYGSWN---YVFYLEVMKSD--FEMLMIggLVMLAAMTKS 192
Cdd:PRK12645 147 FLLISYwYEREASRYGAQKSMLITVFGGLSMLGGFILLyIMTGSFSireMIANADEIQNSplFIPAMI--LILLGAFTKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 193 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMGNLLLLISGL-TMFMAGLGANYEFDLKKIIAL 271
Cdd:PRK12645 225 AQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLiTLFWGSLNAVKQTDLKGILAF 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 272 STLSQLGLMMSILSMG------------YYKLAF----FHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSLMMPL 335
Cdd:PRK12645 305 STVSQLGLIMSLLGIGaaslhyqgddskIYAAAItaaiFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPI 383
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 749111681 336 TSSCFNVANLALCGMPFLAGFYSKDLILE-VVSLSYINMFSF--------FLYFFSTGLTVCYSFRLVYYTMTG 400
Cdd:PRK12645 384 TFTIALIGALSMAGLPPFNGFLSKEMFFEsMLNATEANLFSLdtwgvlfpVIAWVASVFTFVYSIIFIFKTFFG 457
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
22-478 |
2.66e-44 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 164.67 E-value: 2.66e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 22 IFIMNDYSIFIEWEVVSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLII 101
Cdd:MTH00063 15 FLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 102 SPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVFYLevmksdfemlmig 181
Cdd:MTH00063 95 TGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFLCCL------------- 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 182 gLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMGNLLLLISGLTMFMAGLGANY 261
Cdd:MTH00063 162 -FFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTIFITGVSSLF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 262 EFDLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLmmpltSSCFN 341
Cdd:MTH00063 241 FSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSIL-----YGSWN 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 342 VAN-----LALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSS---------- 406
Cdd:MTH00063 316 LFYlfllvLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGVKSSLSSgvrflffnsg 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 407 ------------LNMLNDEGWVMLKSMMGLLILSIFGGSMLSWLIFPSPMVVVLPSYLKLLTLFVCISGGLMGYLISYVS 474
Cdd:MTH00063 396 lmvflwlfinyyVFLLLDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSNLFSNWSSSLFGCDNLVELFYELFYSILDLVS 475
|
....
gi 749111681 475 LFFF 478
Cdd:MTH00063 476 LFFF 479
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
30-363 |
2.63e-43 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 161.30 E-value: 2.63e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 30 IFIEWEVVSFNSMnIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYK-------INRFIMLVLMFVTSMMLLIIS 102
Cdd:PRK06525 54 VAVTLTLVNLGDV-ALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGNRehpvhegTGRYYAFLLLFIGAMAGLVYS 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 103 PNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVFYLEVMKSDFEMLMIGG 182
Cdd:PRK06525 133 STLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVFLG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 183 LvMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSS--SWMGNLLLLISGLTMFMAGLGAN 260
Cdd:PRK06525 213 I-LFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPipHVIGYVGAVMAIVTLLYGFLMYL 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 261 YEFDLKKIIALSTLSQLGLMMSILSMGYY------KLAFFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSLMMP 334
Cdd:PRK06525 292 PQQDMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC-GTRLLPRLRGVLKKLP 370
|
330 340
....*....|....*....|....*....
gi 749111681 335 LTSSCFNVANLALCGMPFLAGFYSKDLIL 363
Cdd:PRK06525 371 LVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
41-395 |
3.23e-41 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 159.15 E-value: 3.23e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 41 SMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDY-KINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVS 119
Cdd:PRK12646 67 TLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 120 YCLVIY-FQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVFYL-----EVMKSDFEMLMIGgLVMLAAMTKSA 193
Cdd:PRK12646 147 FLLISYwYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEIlgqadHIKNHGLFIPMIF-MFLLGAFTKSA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLS-SSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALS 272
Cdd:PRK12646 226 QFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGlSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 273 TLSQLGLMMSILSMG-------------YYKL----AFFHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSLMMPL 335
Cdd:PRK12646 306 TISQLGMIMAMVGIGggyaqhqqdaiasIYVFvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPK 384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 749111681 336 TSSCFNVANLALCGMPFLAGFYSKDLILE-VVSLSYINMFSFFLYFFSTGLTVCYS-FRLVY 395
Cdd:PRK12646 385 MNLVMTIAALSMAGVPFLNGFLSKEMFLDaLTQTGQLSQFSLISMIIIVFIGVIASiFTFTY 446
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
41-395 |
1.60e-39 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 154.70 E-value: 1.60e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 41 SMNIvmTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYK-INRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVS 119
Cdd:PRK12644 65 GLDL--AFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPrLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLS 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 120 YCLVIYFQNVKS-----YNAGMLTALsnriGDVALLLAIAWMLN-YGSWNYVfylEVMKSDFEMLMIGG---LVMLAAMT 190
Cdd:PRK12644 143 FLLIGHYAERAAsrraaLQALLVTTA----GGLAMLVGIIILGQaAGTYRLS---ELLADPPTGPAVSVavvLILVGALS 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMGNLLLLISGL-TMFMAGLGANYEFDLKKII 269
Cdd:PRK12644 216 KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLaTMLLGGWRALRQHDLKLIL 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 270 ALSTLSQLGLMMSILSMGYYKLAFFHL---LTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSLMMPLTsscFNVANLA 346
Cdd:PRK12644 296 AYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVL---AVVAALA 371
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 749111681 347 LCGM---PFLAGFYSKDLILE-VVSLSYINMFSFFLY---FFSTGLTVCYSFRLVY 395
Cdd:PRK12644 372 AASMaglPPLLGFVAKEAALEaVLHDGALGPAGPVVLagiVLGSILTVAYSLRFLW 427
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-439 |
3.41e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 141.17 E-value: 3.41e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 51 DWMSLIFMSFVLMISSLVIFYSkeYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNVK 130
Cdd:PRK08375 76 DSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 131 SYNAGMLTALSNRIGDVALLLAIAwmLNY---GSWNYVFYLEVMKSDFEMLMIGGLVMLAAMTKSAQIPFSSWLPAAMAA 207
Cdd:PRK08375 154 ALAAARKYLIVGLIGSTFLLIGVG--LLYgvtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 208 PTPVSALVHSSTLVTAGVYLLIRFNIVL------SSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLG--- 278
Cdd:PRK08375 232 APPVVTALLSGLVTKVAVYALIRIYFTVfggdfrFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGyil 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 279 LMMSILSMGYYKLAFFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYS 358
Cdd:PRK08375 312 LGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTY-GTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVS 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 359 KDLILeVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDEGWVMLKSMMGLLILSIFGGSMLSWL 438
Cdd:PRK08375 391 KWYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALLSLLLGIYAGPL 469
|
.
gi 749111681 439 I 439
Cdd:PRK08375 470 L 470
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
41-364 |
1.56e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 142.28 E-value: 1.56e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 41 SMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSY 120
Cdd:PRK12649 69 SAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 121 CLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVF--------YLEVMKSDFEMLMIGGLVMLAAMTKS 192
Cdd:PRK12649 149 MLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIatilqdseLIENIKGHPLFLITLILIFIGAAAKS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 193 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSwmGNLLLLISG---LTMFMAGLGANYEFDLKKII 269
Cdd:PRK12649 229 AQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGT--EAWFILVSGtgmITMVLAGFLAFRQTDIKAIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 270 ALSTLSQLGLMMSILSMGYYK-------LAFFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSLMMPLTSSCFNV 342
Cdd:PRK12649 307 AYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEA-ATRDIRKLGGLRKEMPITFIVASI 385
|
330 340
....*....|....*....|..
gi 749111681 343 ANLALCGMPFLAGFYSKDLILE 364
Cdd:PRK12649 386 AALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
91-369 |
9.94e-28 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 118.07 E-value: 9.94e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 91 MFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNVKS-YNAGMLTALSNRIGDVALLLAIaWMLNYGSWNYVFylE 169
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAF-GLLARESGSYDF--A 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 170 VMKSDFEMLMIGGLVMLAAM----TKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNIVL---SSSWMG 241
Cdd:PRK06521 198 AMRAAHLSPFWASLVFLLALfgfgAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLlgaPGWWWG 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 242 NLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMM-----SILSMGYYK-----LAF----FHLLTHALFKALLF 307
Cdd:PRK06521 277 VLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFvglglAMVFIAYGMpllaaLALtaalYHLLNHALFKSLLF 356
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 749111681 308 MCAGAIIHNMnNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDLILEVVSLS 369
Cdd:PRK06521 357 LGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
43-364 |
1.62e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 115.82 E-value: 1.62e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 43 NIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYkinrFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCL 122
Cdd:PRK07234 58 NFGVTLRADALSGYFILTNALVTLAVIFYCWESAKTRF----FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 123 VIYFQNVKSYNAGM-LTALSNrIGDVALLLAIAwmLNYGSWNYVFYLEVMKSDFEMLmigGLVMLAAMTKSAQIPFSSWL 201
Cdd:PRK07234 134 VAYPRTDRAIWVGLrYLFYSN-VAMLFYLIGAV--LVYQANGTFAFSGLATADPEAF---ALIALGLLVKGGIFVSGLWL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVLSSSWMgnLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMM 281
Cdd:PRK07234 208 PLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDL--IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFIL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 282 SILSMGyyklAFFHlLTHALFKALLFMCAGAiIHNMNNSQDIRLMGGLSLMMPLTSSCFNVAnlalcGMPFLAGFYSKDL 361
Cdd:PRK07234 286 AAPLVG----GLYA-LAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTMASFSIA-----GFPLLAGFVSKVL 354
|
...
gi 749111681 362 ILE 364
Cdd:PRK07234 355 TLK 357
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
46-364 |
2.41e-27 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 116.75 E-value: 2.41e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 46 MTLLFDWMSLIFMSFVLMISSLVIFYSKEY---MSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCL 122
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 123 VIY-FQNVKSYNAGMLTALSNRIGDVALLLAIAWM-LNYGSWNYVFyLEVMKSDFEMLMIggLVMLAAMTKSAQIPFSSW 200
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFELSP-LGASAGILSLVFL--LLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 201 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNIVLSSS--WMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQL 277
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPelWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 278 GL-----------------MMSILSMGYyklAFFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSLMMPLTSSCF 340
Cdd:PRK08667 307 GIilmgiglyvifgvygldTLALLALGG---ALFHSLNHALFKSLLFLTAGSVVHAT-GTRNIEKMGGLVKLMPYTSALF 382
|
330 340
....*....|....*....|....
gi 749111681 341 NVANLALCGMPFLAGFYSKDLILE 364
Cdd:PRK08667 383 LVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
53-311 |
5.63e-27 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 114.80 E-value: 5.63e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 53 MSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNVKsy 132
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 133 nAGMLTA----LSNRIGDVALLLAIA-WMLNYGSWNY---VFYLEVMKSDFEMLMIGGLVMLAAMTKSAQIPFSSWLPAA 204
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLsalWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 205 MAAPTPVSALVHSStLVTAGVYLLIRFNIVLSSSWMGNLLLLI-SGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMMSI 283
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLvGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260
....*....|....*....|....*...
gi 749111681 284 LSMGYYKLAFFHLLTHALFKALLFMCAG 311
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
58-358 |
1.24e-26 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 114.24 E-value: 1.24e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 58 MSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAGML 137
Cdd:PRK07390 95 LELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAAR 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 138 TA-LSNRIGDVALLLAIAWMLNY-GSWNYV-FYLEVMKSDFEMLMIG--GLVMLAA-MTKSAQIPFSSWLPAAMAAPTPV 211
Cdd:PRK07390 175 DAfLTKRVGDLLLLMGVVALSPLaGTLNFSdLAAWAATANLDPLTATllGLALIAGpTGKCAQFPLHLWLDEAMEGPNPA 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 212 SALvHSSTLVTAGVYLLIRFNIVLS-SSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMMSILSMGYYK 290
Cdd:PRK07390 255 SIL-RNSVVVATGAWVLIKLQPVLAlSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPD 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 749111681 291 LAFFHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYS 358
Cdd:PRK07390 334 IALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-395 |
5.20e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 108.91 E-value: 5.20e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 51 DWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNVK 130
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 131 -SYNAGMLTALSNRIGDVALLLAIAWMLN-YGSWN--------YVFYLEVMKSDFEMLMIGGLVMLAAMT-----KSAQI 195
Cdd:PRK12667 161 dAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNmadlsakiRGLSFPLTGGLAGNPPLALGVALALALwaftiKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 196 PFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF-------NIVLSS--SWMGNLLLLISGLTMFMAGLGANYEFDL 265
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgiSPSLIDfrAALSPILIILGAVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 266 KKIIALSTLSQLGLMMSILSMGY---YKLAFFHLLTHALFKALLFMCAGAIIHNMNnSQDIRLMGGLSLMMPLTSSCFNV 342
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 749111681 343 ANLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFLYFFSTgLTVCYSFRLVY 395
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
28-378 |
1.48e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 107.21 E-value: 1.48e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 28 YSIFIEWEVVSFNSMNIVMTLlfDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKIN--RFIMLVLMFVTSMMLLIISPNL 105
Cdd:PRK06589 61 KGIRAQFELMDFGNYSIGLHL--EPLGLIFLLLIGFLWICALLYTPKYLAINNIDSssRFLFFFNLTILIGVLIALSSDL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 106 ISILLGWDGLGLVSYCLVIYFQNVKSYNAGmLTALSNRIGDVALLLAIAWMLNYGSWNYVFYLEVMKSDFEMLMIGGLVM 185
Cdd:PRK06589 139 FTMFVCYELLTISTAFLIGHTRNNISLSGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMF 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 186 LAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-------FNIVLSSSWMGNLLLLISGLTMFMAGLG 258
Cdd:PRK06589 218 IYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 259 ANYEFDLKKIIALSTLSQLGLMM---SILSMGYYKLAFFHLLTHALFKALLFMCAGAIIhNMNNSQDIRLMGGLSLMMPL 335
Cdd:PRK06589 298 ALKTDNIKKILAYSTISQLSLALlsaFILTPKALGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPL 376
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 749111681 336 TSSCFNVANLALCGMPFLAGFYSKDLILEVVSLSYINMFSFFL 378
Cdd:PRK06589 377 ISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIV 419
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
40-448 |
3.08e-23 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 103.92 E-value: 3.08e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 40 NSMNIVMTLLFDWMSLIFMsfvlMISSLVIFYSKEYMSSDYKINR--FIMLVLMFVTSMMLLIISPNLISILLGWDGLGL 117
Cdd:PRK08668 57 FFGGFKLTFTLTHLSWFFA----MISLLVIFSVAFFMVSEKTKNDayFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 118 VSYcLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLN-YGSWNY--VFYLEVMKSDFEMLMIGGLVMLAA-MTKSA 193
Cdd:PRK08668 133 SSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFadISQGLINDTSTGFALIVFLFLLAFgVAKAG 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 194 QIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVY-------------LLIRFNIVLSSSWMGNLLLLISGLTMFMAGLGA 259
Cdd:PRK08668 212 IFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYgfllvlyvlpgtkLFSEFGTYRGVPLFNYILAWLGNISIIVGTLMA 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 260 NYEFDLKKIIALSTLSQLGLMMSILSMGY---YKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQdIRLMGGLSLMMPLT 336
Cdd:PRK08668 291 ILQEDIKKLIAYSSVANGGYILVGLGLGTslgFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTK-ISEMGGLIEKMPFT 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 337 SSCFNVANLALCGMPFLAGFYSKDLILEVVsLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNfSSLNMLNDEGWV 416
Cdd:PRK08668 370 FAMYLVAIISLAGIPPMSGFASKWLIFEAL-ISKGMPITAFMAFFGSIGSFLYVFRPLAGVFLGQLP-SDHKDVKEAPLP 447
|
410 420 430
....*....|....*....|....*....|..
gi 749111681 417 MLKSMMGLLILSIFGGsmlswlIFPSPMVVVL 448
Cdd:PRK08668 448 MLIPMAILVLLNVVFG------VAPGLVLQEI 473
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-439 |
4.89e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 99.79 E-value: 4.89e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 51 DWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNV- 129
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTw 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 130 KSYNAGMLTALSNRIGDVALLLAIAWML-NYGSWNYVFYLEVMKSDFEMLMIGGLVMLAA--MTKSAQIPFSSWLPAAM- 205
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSENPTVVAKIALALFIAglAMKSGAVPVHMWLPDAYp 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 206 AAPTPVSALVHSSTLvtAGVYLLIR-----FNIVLSSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLM 280
Cdd:PRK08376 249 AAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 281 MSILSMGYYKL---------------AFFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSLMMPLTSSCFNVANL 345
Cdd:PRK08376 327 LLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAA 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 346 ALCGMPFLAGFYSKDLILEVVSLsyINMFSFFLYFFSTGLTVCySFRLVYYTMTGTSNFSSLNMLNDEGWVMLKSmMGLL 425
Cdd:PRK08376 406 AIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLA-SFVKVFHTAFFGPPSEKVMNVKEPPKPMLVP-MLIL 481
|
410
....*....|....
gi 749111681 426 ILSIFGGSMLSWLI 439
Cdd:PRK08376 482 AIAIIGMGLFPWQI 495
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
144-445 |
4.06e-21 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 96.69 E-value: 4.06e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 144 IGDVALLLAIAWMLNYG---SWNYVFYLEVMKSDFEMLMIGGLVMLAAMTKSAQIPFSSWLP-AAMAAPTPVSALvHSST 219
Cdd:COG1008 172 AGSLLMLVAILALYFLAgalTFDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGV 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 220 LVTAGVYLLIRFNIVL---SSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLM-MSILSMGYYKL--AF 293
Cdd:COG1008 251 LLKMGGYGLLRFALPLfpeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLqgAV 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 294 FHLLTHALFKALLFMCAGAIIHNMNnSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDLILevVSLSYINM 373
Cdd:COG1008 331 LQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL--LGAFQVNP 407
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 749111681 374 FSFFLYFFSTGLTVCYSFRLVYYTMTGTSNfSSLNMLNDEGWVMLKSMMGLLILSIFGGsmlswlIFPSPMV 445
Cdd:COG1008 408 WLAILAALGLILTAAYLLWMYQRVFFGPLK-EELAELPDLNPRELAVLAPLAALILLLG------LYPQPLL 472
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
133-318 |
4.84e-21 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 96.64 E-value: 4.84e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 133 NAGMLTALSNRIGDVALLLAIAWM-LNYGSWNYVFYLE----VMKSDFEMLMIGGLVMLAAMTKSAQIPFSSWLPAAMAA 207
Cdd:PRK08601 154 EAAKISGMLFLISWLALALAIVWLfIATGEWQLTSVLSnenlAQLGTWEKTGINLLLILAVMIPAAQWPFQRWLIESAVA 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 208 PTPVSALVHSStLVTAGVYLLIRFNIVLSSSWMGNLLLLISGLTMFMaGLGANY-EFDLKKIIALSTLSQLGLMMSILSM 286
Cdd:PRK08601 234 PTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLI-GTGISLvQVDYKRQLVGSTMAQMGFMLVQCAL 311
|
170 180 190
....*....|....*....|....*....|..
gi 749111681 287 GYYKLAFFHLLTHALFKALLFMCAGAIIHNMN 318
Cdd:PRK08601 312 GAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
105-363 |
3.53e-19 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 91.11 E-value: 3.53e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 105 LISILLGWDGLGLVSYCLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMlnygswnyvfYLEVMKSDFEMLMIGG-- 182
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLH----------YAETGSFAFGAIAGLGgt 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 183 ---LVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRfnivlssSWMGNLLLLISGLTMFMAGLG- 258
Cdd:PRK12668 185 aawLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR-------AFPGTELLIYIGAAMAVYGVFf 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 259 ANYEFDLKKIIALSTLSQLGLMMSILSMGYyKL----AFFHLLTHALFKALLFMCAGAIIHnMNNSQDIRLMGGLSLMMP 334
Cdd:PRK12668 258 ALLENDLRRLLSYHIVSQVGYMVAGIGIGT-ALaingAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRSMP 335
|
250 260
....*....|....*....|....*....
gi 749111681 335 LTSSCFNVANLALCGMPFLAGFYSKDLIL 363
Cdd:PRK12668 336 LTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
47-359 |
7.29e-19 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 89.41 E-value: 7.29e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 47 TLLFDWMSLIFMSFVLMISSLVIFYSKEYMSsDYKINR--FIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLV- 123
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLE-RRGLLRgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 124 IYFQNVKSYNAGM----LTALSNRIgdvaLLLAIAWMLNY-GSWNY---VFYLEVMKSDFEMLMIGGLVMLAAMT-KSAQ 194
Cdd:COG1007 144 FRRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtGSLNLagiAAALAAGGANSPLLLLGLVLVLAGLAfKLSA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 195 IPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRFNIV----LSSSWMgNLLLLISGLTMFMAGLGANYEFDLKKI 268
Cdd:COG1007 220 VPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEafpgLAADWQ-LLLAVLAVLSMTVGNLAALAQTNVKRM 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 269 IALSTLSQLG-LMMSILSMGY--YKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVANL 345
Cdd:COG1007 297 LAYSSIAHAGyLLLGLAAGTPlgVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLL 376
|
330
....*....|....
gi 749111681 346 ALCGMPFLAGFYSK 359
Cdd:COG1007 377 SLAGIPPTAGFFGK 390
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
56-448 |
1.05e-18 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 89.06 E-value: 1.05e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 56 IFMSFVLMISSLVIFYSKEYMSSDyKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNVKSYNAG 135
Cdd:PRK08377 82 LFVLIIAIVSFIMSIFSLKAVEVE-PIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEAS 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 136 MLTALSNRIGDVALLLAIAwmLNYGSWNYVFYLEVMKSDFEMLMIGGLVMLAAM-----TKSAQIPFSSWLPAA-MAAPT 209
Cdd:PRK08377 161 MKYIVLGGIGSSFFLIGVA--LIYGATGTLNMAHIAQLAGTIDPTVAQVGLALLifglaVEAELFPLNAWAPDAyQAAPH 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 210 PVSALVhSSTLVTAGVYLLIRFNIVLS--SSWMGNLLLLI--SGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMMSILS 285
Cdd:PRK08377 239 PITVMF-SAFVVKAGLYAMARILYLMQnaNGWSSVLKLVIimATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALA 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 286 MGY---YKLAFFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDLI 362
Cdd:PRK08377 318 LGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL-GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRI 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 363 LeVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYytmtgTSNFSSLNMLNDEGWVMLKSMMGLLILSIFGGsmlswlIFPS 442
Cdd:PRK08377 397 I-LAGLSAGYTWPVALVLGASVVEAVYYFRLIH-----TMWFKGEGERIRENAAIGIILLLLAALIVVIG------IYPT 464
|
....*.
gi 749111681 443 PMVVVL 448
Cdd:PRK08377 465 PFWEVV 470
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
51-439 |
1.31e-15 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 79.60 E-value: 1.31e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 51 DWMSLIFMSFVLMISSLVIFYSKEymSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNVK 130
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWE--SIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 131 SYNAGMLTALSNRIGDVALLLAIAWM--LNYGSWNYVFYLEVMKSDFEMLMIGGLVMLAAMTKSAQIPFSSWLPAAMA-A 207
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 208 PTPVSALVhSSTLVTAGVYLLIRFNIVL---SSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGL-MMSI 283
Cdd:TIGR01972 234 PTAGSVIL-AGVLLKMGTYGFLRFNLPLfpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 284 LSMGYYKL--AFFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDL 361
Cdd:TIGR01972 313 FSFNELGIsgAVFQMISHGLITAALFLLVGVLYERA-HTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 749111681 362 ILevVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDEGWVMLKSMMGLLILSIFGGSMLSWLI 439
Cdd:TIGR01972 392 IL--LGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLL 467
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
149-356 |
1.07e-14 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 77.17 E-value: 1.07e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 149 LLLAIA-WML--NYGSWNyvfyLEVMKSDFEMLMIGGLVMLAAMTK----SAQIPFSSWLPAAMA-APTPVSALVhSSTL 220
Cdd:PRK08042 148 LLLAIAcWLLwqRYGTLD----LRLLDMRMQQLPLGSDIWLLGVIGfgllAGIIPLHGWVPQAHAnASAPAAALF-STVV 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 221 VTAGVYLLIRFNIVLSSS--WMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLA------ 292
Cdd:PRK08042 223 MKIGLLGILTLSLLGGNAplWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpal 302
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 749111681 293 --------FFHLLTHALFKALLFMCAGAIIHNMNNsQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGF 356
Cdd:PRK08042 303 ialglvggLYHLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
47-359 |
2.25e-14 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 75.63 E-value: 2.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 47 TLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINrFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIY- 125
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDRGRGE-FYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 126 FQNVKSYNAGM----LTALSnrigdvALLLAIAWMLNYG-----SWNYVFYLEVMKSDFEMLMIGGLVMLAA--MTKSAQ 194
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALA------SGFLLYGMSLLYGatgslSFAGIAKALADGSGNSLLLLFGLVFLLVglAFKLSA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 195 IPFSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFNIVL---SSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIA 270
Cdd:PRK05777 221 VPFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAfggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 271 LSTLSQLG-LMMSILSMGY--YKLAFFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVANLAL 347
Cdd:PRK05777 300 YSSIAHAGyLLVGLAAGTAegYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSL 379
|
330
....*....|..
gi 749111681 348 CGMPFLAGFYSK 359
Cdd:PRK05777 380 AGIPPTAGFWGK 391
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-447 |
2.02e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 72.84 E-value: 2.02e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 49 LFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQN 128
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 129 VKSYNAGMLTALSNRIG------DVALLLAIAWMLNYGSwnyVFYLEVMKSDFEMLMIGGL-VMLAAMTKSAQIPFSSWL 201
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGatfyliGIGFLYAITGTLNMGD---MFLIIQDLPTNRAIQIGVLfIMVGLFIKAALFPFHKWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 202 PAAMAAPTPVSALVHSSTLVTAGVYLLIRF-------NIVLSSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTL 274
Cdd:PRK12662 233 IQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 275 SQLGLMMSILSMG-YYKL--AFFHLLTHALFKALLFMCAGAIIHNMNNSqDIRLMGGLSLMMPLTSSCFNVANLALCGMP 351
Cdd:PRK12662 313 SHIGYIILAVSLNtYYGLaaAVAYIVNHSIVKSALFMVSGSISYHFGTT-KLEDCLNLWKSMPKITLAFVLLSLSLIGMP 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 352 FLAGFYSKDLILEVVSLSYInMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSS--LNMLNDEGWVMLKSMMGLLILSI 429
Cdd:PRK12662 392 PTSGFVAKWYILDAFIKSNA-WIGLVVLLVGSGLSVIYVWKIVEALYFESRMVESkaNDKAFKTPNAMVLCIWIMAILSI 470
|
410
....*....|....*...
gi 749111681 430 FGGsmlswlIFPSPMVVV 447
Cdd:PRK12662 471 IVG------IYPIPLTLI 482
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
176-381 |
2.94e-13 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 72.29 E-value: 2.94e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 176 EMLMIGGLVMLAAMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVL---SSSWMGNLLLLISGLTM 252
Cdd:PRK12663 205 TLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqERELLHPLLATMAAITM 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 253 FMAGLGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKL---AFFHLLTHALFKALLFMCAGAIIHnMNNSQDIRLMGGL 329
Cdd:PRK12663 284 VIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGL 362
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 749111681 330 SLMMPLTSSCFNVANLALCGMPFLAGFYSKDLILE-------------VVSLSYINMFSFFLYFF 381
Cdd:PRK12663 363 YRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgaldngayillalMLITSLITMYSLFRIFF 427
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
190-390 |
4.25e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 71.52 E-value: 4.25e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 190 TKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIR-FNIVLSS--SWMGNLLLLISGLTMFMAGLGANYEFDL 265
Cdd:PRK07691 221 TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARtFTLFFSHdtSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 266 KKIIALSTLSQLGLMMSILSMGY---YKLAFFHLLTHALFKALLFMCAGAIIHnMNNSQDIRLMGGLSLMMPLTSSCFNV 342
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTesgMIGAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 749111681 343 ANLALCGMPFLAGFYSKDLILEvVSLSYINMFSFFLYFFStGLTVCYS 390
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLS-SLLVLYS 424
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
190-363 |
6.63e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 71.11 E-value: 6.63e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 190 TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNIVLSSS----WMGNLLLLISGLTMFMAGLGANYEFD 264
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAigsdFPGRLLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 265 LKKIIALSTLSQLGLMMSILSMGYyKLAFF----HLLTHALFKALLFmCAGAIIHNMNNSQDIRLMGGLSLMMPLTSSCF 340
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGG-PLGIFaallHMLNHSLTKSAIF-FASGNVLQKYGTRDINVIRGLLKVSPLTGWGL 382
|
170 180
....*....|....*....|...
gi 749111681 341 NVANLALCGMPFLAGFYSKDLIL 363
Cdd:PRK06458 383 MLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
178-364 |
9.23e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 70.77 E-value: 9.23e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 178 LMIGGLVMLAAMTKSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFNIVL-SSSWMGNLLLLISGLTMFMA 255
Cdd:PRK12665 209 TALFAVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLfPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 256 GLGANYEFDLKKIIALSTLSQLGLMMSILSMGY---YKLAFFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSLM 332
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKA 366
|
170 180 190
....*....|....*....|....*....|..
gi 749111681 333 MPLTSSCFNVANLALCGMPFLAGFYSKDLILE 364
Cdd:PRK12665 367 SPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
140-444 |
3.06e-12 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 69.08 E-value: 3.06e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 140 LSNRIGDVALLLAIAWMLNY-----GSWNYVFYLEV-MKSDFEMLMIGGLvMLAAMTKSAQIPFSSWLPAAMA-APTPVS 212
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLVVVyynatGTFDIADLLNLpLPPGVQYWLFLAF-FIAFAVKMPMFPLHTWLPDAHVqAPTAGS 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 213 ALvHSSTLVTAGVYLLIRFNIVL---SSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLG-LMMSILSMGY 288
Cdd:PRK05846 247 VL-LAGILLKMGAYGLLRFSLPLfpdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQ 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 289 YKL--AFFHLLTHALFKALLFMCAGAIIHNMNnSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDLILevV 366
Cdd:PRK05846 326 LGIqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--L 402
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 749111681 367 SLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNfSSLNMLNDEGWVMLKSMMGLLILSIFGGsmlswlIFPSPM 444
Cdd:PRK05846 403 GSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK-NEVAKLKDLNGRELLILLPLVALLLLLG------VYPKPL 473
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
183-363 |
2.52e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 65.93 E-value: 2.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 183 LVMLAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNIVLSSSWMG----NLLLLISGLTMFMAGL 257
Cdd:PRK08676 211 FIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAeqfsNVLIGLGIFSIAVAAF 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 258 GANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLAF---FHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSLMMP 334
Cdd:PRK08676 290 SMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQP 368
|
170 180
....*....|....*....|....*....
gi 749111681 335 LTSSCFNVANLALCGMPFLAGFYSKDLIL 363
Cdd:PRK08676 369 VAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-359 |
7.87e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 64.64 E-value: 7.87e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 51 DWMSLIFMSFVLMISSLVIFYSKEYM-SSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYF-QN 128
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 129 VKSYNAGMLTALSNRIGDVALLLAIAWMlnYGSWNYVFYL-EVMKSDFEMLMIGGLVMLAAMT--------KSAQIPFSS 199
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWL--YGLSGGEIELqEIVNGLINTQMYNSPGISIALIfitvgigfKLSLAPFHQ 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 200 WLPAAM-AAPTPVSALVhSSTLVTAGVYLLIR-FNIVLSSS---WMgNLLLLISGLTMFMAGLGANYEFDLKKIIALSTL 274
Cdd:CHL00049 236 WTPDVYeGSPTPVVAFL-SVTSKVAASALATRiFDIPFYFSsneWH-LLLEILAILSMILGNLIAITQTSMKRMLAYSSI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 275 SQLGLMMSILSMGYYKLAFFHLLTHALFkaLLFMCAGA----IIHNMNNSQD-IRLMGGLSLMMPLTSSCFNVANLALCG 349
Cdd:CHL00049 314 GQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGG 391
|
330
....*....|
gi 749111681 350 MPFLAGFYSK 359
Cdd:CHL00049 392 IPPLAGFFGK 401
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
40-364 |
1.03e-09 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 60.82 E-value: 1.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 40 NSMNIVMTLLFDWMSLIFMSFVLMISSLVIFyskEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVS 119
Cdd:PRK06277 60 NGYHSGITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQ 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 120 YCLVIYFQNVKSYNAGMLTALSNRIGDVALLLAIAWMLNY-GSWN---YVFYLEVMKSDFEMLMIGGLVMLAAMTKSAQI 195
Cdd:PRK06277 137 VGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNitdIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLP 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 196 PFSSWLPAAMAAPTP-VSALVHSSTLVTAGVYLLIRFNIVLSSSWMGN---LLLLISGLTMFMAGLGANYEFDLKKIIAL 271
Cdd:PRK06277 217 PFHTIKSDIYAKAKPfGSALLQTFSKFVLVALMLVIFKLFGGLSYFPSaqgVLIALSVLAMVFGVVMALLQTDYKRLLAY 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 272 STLSQLGLMMSILSMGY---YKLAFFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVANLALC 348
Cdd:PRK06277 297 HAISQGGYVAAGLALGTplgIVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAIS 375
|
330
....*....|....*.
gi 749111681 349 GMPFLAGFYSKDLILE 364
Cdd:PRK06277 376 GVPPFNGFQSKLMLAQ 391
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
37-85 |
6.86e-07 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 46.27 E-value: 6.86e-07
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 749111681 37 VSFNSMNIVMTLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDYKINRF 85
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
57-311 |
6.99e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 52.10 E-value: 6.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 57 FMSFVLMISSLV-IFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYcLVIYFQNVKSYNAG 135
Cdd:PRK06459 45 VLSFFSIISTIVwILASLYSIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSY-VAIALTKKNKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 136 MLTALsnriGDVALLLAIAWMLNYGSWNYVFYLEVMKSDFEMLMIGglvmLAAMTKSAQIPF--SSWLPAAMA-APTPVS 212
Cdd:PRK06459 124 VFMAF----GELSTVLILAGFAWAFIISGTTNFSYLPSPVPLILAS----FGFIIKMGMMPFlvSEWLPIAHGnAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 213 AlVHSSTLVTAGVYLLIR---FNIVLSSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMMSILS---- 285
Cdd:PRK06459 196 A-ILSATMTLMGVYGILKmtiLTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGlymv 274
|
250 260 270
....*....|....*....|....*....|....*
gi 749111681 286 -------MGYYKLA--FFHLLTHALFKALLFMCAG 311
Cdd:PRK06459 275 tkqlitsIEHFSLItvILYSFAHSVAKTGLFLSSG 309
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
175-358 |
9.36e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 51.57 E-value: 9.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 175 FEMLMIGGLvMLAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNIVLSSS---WMGNLLLLISGL 250
Cdd:PRK12561 183 LELLLYAGF-LIAFGVKLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMLPDahvYFAPALAILGVV 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 251 TMFMAGLGANYEFDLKKIIALSTLSQLGLMM----SILSMGYYKlAFFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLM 326
Cdd:PRK12561 261 NIIYGALNAFAQDNVKRRLAYSSVSHMGFVLlgiaAFTDLGISG-AMLQMISHGLIAAALFFLTG-VTYERTHTLSIPNM 338
|
170 180 190
....*....|....*....|....*....|..
gi 749111681 327 GGLSLMMPLTSSCFNVANLALCGMPFLAGFYS 358
Cdd:PRK12561 339 GGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
176-362 |
1.18e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 48.16 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 176 EMLMIGGLVMLAAMtKSAQIPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFNI-VLSSSW--MGNLLLLISGLT 251
Cdd:PRK06473 204 QLLLLAPILVGFGI-KIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVgLFPEAWvyLAPWLATWAVVS 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 252 MFMAGLGANYEFDLKKIIALSTLSQLGLMM---------SILSmgyyklAFFHLLTHALFKALLFMCAGaIIHNMNNSQD 322
Cdd:PRK06473 282 VLYGASCAIAQKDMKKMVAYSSIGHMGYILlaaaaatplSILA------AVFQMISHGLISALLFLLVG-VVYKKTGSRD 354
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 749111681 323 IRLMGGL---SLMMPLTSSCFNVANLALCGMPFLAGFYSKDLI 362
Cdd:PRK06473 355 VDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
48-435 |
1.39e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 47.63 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 48 LLFDWMS--LIFMSFVLMISSLVIFYSKEYMSSDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIY 125
Cdd:MTH00206 55 LSYDPLSspLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITR 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 126 FQNVKS-YNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVFYLEVMKSDFEMLMIGGLVMLAA-MTKSAQIPFSSWLPA 203
Cdd:MTH00206 135 WGNQKErLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWNNNLWWLACILAfLVKLPLYGVHLWLPK 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 204 AMAAPTPVSALVHSSTLVTAGVYLLIRFNIVL--SSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMM 281
Cdd:MTH00206 215 AHVEAPVAGSMVLAGVLLKLGGYGMMRIILILgpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVT 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 282 SILSMGY---YKLAFFHLLTHALFKALLFmCAGAIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYS 358
Cdd:MTH00206 295 AGILSGSpwgFKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFG 373
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 749111681 359 KdlILEVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGTSNFSSLNMLNDEGWVMLKSMMGL--LILSIFGGSML 435
Cdd:MTH00206 374 E--LLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLfpVILLILNPNLI 450
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
91-419 |
4.79e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 45.79 E-value: 4.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 91 MFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQN-VKSYNAGM----LTALSNR--IGDVALLLAIAWMLNYGSWN 163
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGsGYSAEAGLkyfvLGALSSGlfLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 164 YVFYLEVMKSDFEMLMIGGLVMLAAMTKSAQIPFSSWLPAAM-AAPTPVSALVhsSTLVTAGVyllirFNIVLSSSWMGN 242
Cdd:MTH00196 81 LVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYeGAPTKTTALL--AIVPKLGI-----FSILVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 243 LLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMMSILSMGYYKLAFFHLLTHALFkALLFMCAGAIIHNMNNSQD 322
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIY-IIMSICVFSIILALNVYKN 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 323 -IRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDLILeVVSLSYINMFSFFLYFFSTGLTVCYSFRLVYYTMTGT 401
Cdd:MTH00196 233 lIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL-LSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKILFFQA 311
|
330 340
....*....|....*....|
gi 749111681 402 SNF--SSLNMLNDEGWVMLK 419
Cdd:MTH00196 312 NSFllISTKILKKENKINLR 331
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
175-358 |
5.88e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 45.85 E-value: 5.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 175 FEMLMIGGLvMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVL---SSSWMGNLLLLISGLT 251
Cdd:PRK02546 211 FQLLCYAGL-LIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMlpdAHAQFAPLLIVLGVVN 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 252 MFMAGLGANYEFDLKKIIALSTLSQLGLMM----SILSMGYYKlAFFHLLTHALFKALLFMCAGAIiHNMNNSQDIRLMG 327
Cdd:PRK02546 290 IIYAALTSFAQRNLKRKIAYSSISHMGFVLigigSFTDLGTSG-AMLQMISHGLIGASLFFLVGAT-YDRTHTLMLDEMG 367
|
170 180 190
....*....|....*....|....*....|.
gi 749111681 328 GLSLMMPLTSSCFNVANLALCGMPFLAGFYS 358
Cdd:PRK02546 368 GVGQKMRKMFAMWTACSLASLALPGMSGFVA 398
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
55-391 |
6.11e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 45.68 E-value: 6.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 55 LIFMSFVLMISSLVIFYSKEYMSSDYKInrfIMLVLMFVTSMMLLIISPNLISILlgWDGLGLVSYCLV-IYFQNVKSYN 133
Cdd:MTH00226 108 IILTGFIVPCSILISWHSVKYLTKSFLI---CMLILEFLLYAVFSVLDIFMFYIL--FEGVLIPMYLILgIWGSREEKMQ 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 134 AGMLTALSNRIGDVALLLAIAWMLN-YGSWNYVFYLE----VMKSDFEMLMIGglVMLAAMTKSAQIPFSSWLPAAMAAP 208
Cdd:MTH00226 183 AAYYFFFYTLIGSVLMLLCLFSLYNiHGTTDYLTLAScshvVSEQTQKWIFLG--IFLAMAVKIPIFPFHIWLPKAHVEA 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 209 TPVSALVHSSTLVTAGVYLLIRFN---IVLSSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLM-MSIL 284
Cdd:MTH00226 261 PVAGSVLLAGILLKLGGYGLVRLSwpiLPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVsITLV 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 285 SMGYYKL--AFFHLLTHALFKALLFMCAgAIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGFYSKDLI 362
Cdd:MTH00226 341 THDIIGLtgSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLS 419
|
330 340 350
....*....|....*....|....*....|.
gi 749111681 363 LevvsLSYINMFSFFLYFFSTG--LTVCYSF 391
Cdd:MTH00226 420 I----LSSFNWNPIIGVFVCSGviLSAVYSF 446
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
144-356 |
1.57e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 44.27 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 144 IGDVALLLAIAWMLNY-GSWNY-VFYLEVMKSDFEMLMIGGLVMLAAMtKSAQIPFSSWLPAAMAAPTPVSALVHSSTLV 221
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYqALCCLKIEKELQYFIFLGFFLSLAI-KIPKIPFHIWLPQAHVEAPVAGSVILAGVLL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 222 TAGVYLLIRFNIVL---SSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLM-MSILSMGYYKL--AFFH 295
Cdd:MTH00217 250 KLGGYGFIRFSWPLlpeASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVtLGIFSHTIQGLvaAIFL 329
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 749111681 296 LLTHALFKALLFMcAGAIIHNMNNSQDIRLMGGLSLMMPLTSSCFNVANLALCGMPFLAGF 356
Cdd:MTH00217 330 MLAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNF 389
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
195-364 |
1.75e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 44.32 E-value: 1.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 195 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVL---SSSWMGNLLLLISGLTMFMAGLGANYEFDLKKIIAL 271
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLfpqTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 272 STLSQLG--LMMSILSMGYYKL-AFFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLS---LMMPLTSSCFNVANL 345
Cdd:PRK07363 302 SSIGHMGyiLVAAAAGTQLSLLgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGM 380
|
170
....*....|....*....
gi 749111681 346 ALCGMPFLAGFYSKDLILE 364
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQ 399
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
184-358 |
4.60e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 43.13 E-value: 4.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 184 VMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIVL---SSSWMGNLLLLISGLTMFMAGLGAN 260
Cdd:MTH00204 215 FFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLfpaASEYFAPLIVMLSVIAVIYGSLTTC 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 261 YEFDLKKIIALSTLSQLGLM-MSILSMGYYKL--AFFHLLTHALFKALLFMcAGAIIHNMNNSQDIRLMGGLSLMMPLTS 337
Cdd:MTH00204 295 RQVDFKRLIAYSSVAHMGLVpLGLFTHTIEGLvaAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFV 373
|
170 180
....*....|....*....|....*
gi 749111681 338 SCFNVANLALCGMP----FLAGFYS 358
Cdd:MTH00204 374 IIMLVLSLANMGFPlscnFVGEFFS 398
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
183-364 |
9.33e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 41.73 E-value: 9.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 183 LVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIrfniVLSSSWMGNLLLLISGLTMFMAGLGANYE 262
Cdd:MTH00112 97 LLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLL----MTSNSLNPTLLLTLAILSTLIGGWGGLNQ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 263 FDLKKIIALSTLSQLGLMMSILSMGYyKLAFFHLLTHALFKALLFMcagaiIHNMNNSQDIRLMGGLSLMMPLTSSCFNV 342
Cdd:MTH00112 173 TQLRKIMAFSSIAHLGWMIAIITYSP-KLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTLML 246
|
170 180
....*....|....*....|..
gi 749111681 343 ANLALCGMPFLAGFYSKDLILE 364
Cdd:MTH00112 247 TLLSLAGLPPLTGFMPKWLILQ 268
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-369 |
9.44e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 42.02 E-value: 9.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 47 TLLFDWMSLIFMSFVLMISSLVIFYSKEYMSSDykinrfIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYF 126
Cdd:PRK12664 33 VYNLDLVLFIVLSFSLALIFLYILPIKNMRFSE------MLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 127 QNVKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVFYLevmksdfemlmiggLVMLAAMTKSAQIPFSSWLPAAMA 206
Cdd:PRK12664 107 CPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGYCKL--------------LFMLGLLINCACFPASSWVVDAYP 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 207 APTPVSALVHSSTLVTAGVYLLIRFNIVLSsswmgnLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGLMMSILSM 286
Cdd:PRK12664 173 AASNFGIIVLSLFTTKVAALVLLLFFSGEE------ILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 287 GY-----YKLAFFHLLTHALFKALLFMCAGAIIhnmNNSQDIRL--MGGLsLMMPLTSSCFNVANLALCGMPFLAGFYSK 359
Cdd:PRK12664 247 SGssgvaIGILILQIVLSVVYQTLLFMVADSVI---NRTRKFNLnrVGGL-FKMSLEAMCCIIAILNMGAFPGTAGFVSK 322
|
330
....*....|
gi 749111681 360 DLILEVVSLS 369
Cdd:PRK12664 323 SLITHSIDTA 332
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
51-359 |
1.05e-03 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 41.96 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 51 DWMSLIFMSFVLMISSLVIFYSKEYMS-SDYKINRFIMLVLMFVTSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNV 129
Cdd:PRK02504 77 DNLSIAFRAIIALSTLVTLLMSWRYVEqSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKRD 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 130 KSYNAGMLTALSNRIGDVALLL---AIAWMLNYGSWNYVFYLEVMKSDFEMLMIGGLVMLAAMT--KSAQIPFSSWLPAA 204
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLygsSLLYGLSGGSTQLSAIALALITSPSLGLALALVFVIAGIafKISAVPFHQWTPDV 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 205 M-AAPTPVSALVhSSTLVTAGVYLLIRFNIV----LSSSWMgNLLLLISGLTMFMAGLGANYEFDLKKIIALSTLSQLGL 279
Cdd:PRK02504 237 YeGSPTPVVAFL-SVGSKAAGFALAIRLLVTafpsFDEQWK-LLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGF 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111681 280 MMSILSMGY---YKLAFFHLLTHalfkalLFMCAGA----IIHNMNNSQD-IRLMGGLSLMMPLTSSCFNVANLALCGMP 351
Cdd:PRK02504 315 VMIGLVAGTeagYASMVFYLLAY------LFMNLGAfacvILFSLRTGTDqISDYAGLYQKDPLLTLGLSLCLLSLGGIP 388
|
....*...
gi 749111681 352 FLAGFYSK 359
Cdd:PRK02504 389 PLAGFFGK 396
|
|
| |
