|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-337 |
7.08e-91 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 274.78 E-value: 7.08e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 1 MFNNSSKIVFFSILMMGTLISISANSWLGAWMGLEINLLSFIPLMSDNK-LMSTEASLKYFLTQALASSVFLFATILFLL 79
Cdd:MTH00160 1 MMMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKnLMSSESSLKYFLIQALASIILLFSIILNML 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 80 NSNkiNSNYFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLMLISYIIFKPLIIISIILSSMIGA 159
Cdd:MTH00160 81 NLM--LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNNFIIIIIILSAIIGA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 160 LGGLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKTSHINQLFTLNFHSKTMKFFLFF 239
Cdd:MTH00160 159 IGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 240 NLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYSAFMLNYYENNWMINSTYNSNYFVTFMT 319
Cdd:MTH00160 239 NLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFSLILNFL 318
|
330
....*....|....*...
gi 749111674 320 ySFFSSMGLFLIFSLYFL 337
Cdd:MTH00160 319 -SFISLFGLILSSLLFLL 335
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
24-279 |
2.95e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 110.87 E-value: 2.95e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 24 ANSWLGAWMGLEINLLSFIPLMSDNK--LMSTEASLKYFLTQALASSVFLFATILFLLNSNKIN---------------S 86
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGksPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSfdelskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 87 NYFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLN-ALILMTWQKIAPLMLI--------SYIIFKPLIIISIILSSMI 157
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVsALLAATLVKAGGYGLIrrsllylpSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 158 GALGGLNQTSLRKLMAYSSINHLGWMLASM----YDSNLLWMTYFLFYTFLTFTMIFMFN-----MFKTSHINQLFTLNF 228
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGsviyrRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 749111674 229 HSKTMKFFLFFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMT 279
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-295 |
7.85e-24 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 101.35 E-value: 7.85e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 10 FFSILMMGTL---ISISANSWLGAWMGLEINLLSFIPL--MSDNKLMSTEASLKYFLTQALASSVFLF------------ 72
Cdd:COG1007 104 FYALLLFATLgmmLMASANDLLTLFLGLELLSLSLYVLvaFRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgsl 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 73 --ATILFLLNSNKINSNYFME--MMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIA---PLMLISYIIFKP 145
Cdd:COG1007 184 nlAGIAAALAAGGANSPLLLLglVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAafaALLRLLVEAFPG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 146 LIIISIILSSM-------IGALGGLNQTSLRKLMAYSSINHLGWMLASM-------YDSNLLWMTYFLFYTFLTFTMIFM 211
Cdd:COG1007 264 LAADWQLLLAVlavlsmtVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLaagtplgVSAALFYLLAYLFMNLGAFAVILL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 212 F--NMFKTSHINQLFTLNFHSKTMKFFLFFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRL 289
Cdd:COG1007 344 LsrKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
....*.
gi 749111674 290 SYSAFM 295
Cdd:COG1007 424 VKAMYF 429
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
2-329 |
8.36e-19 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 86.93 E-value: 8.36e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 2 FNNSSKIVFFSILM---MGTLISISANSWLGAWMGLEINLLSFIPLMS--DNKLMSTEASLKYFLTQALASSVFLF---- 72
Cdd:TIGR01770 96 KEKINKFEFYILLLfalLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlkRKSRFSTEAGLKYFILGAFSSGLLLFgisl 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 73 -----------ATILFLLNSNKINSNYFMEM-MIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLMLI-- 138
Cdd:TIGR01770 176 iygftgslnfeDLLLFLSNGMLNISLLLLGIvLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFlr 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 139 --------SYIIFKPLIIISIILSSMIGALGGLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFY--------- 201
Cdd:TIGR01770 256 lflyilfgFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYifiyalmsl 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 202 -TFLTFTMIFMFNMFKTSHINQLFTLNFHSKTMKFFLFFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTL 280
Cdd:TIGR01770 336 gAFGVLSLLRSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSV 415
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 749111674 281 ITLYFYIRLSYSAFMlNYYENNWMINSTYNSNYFVTFMTYSFFSSMGLF 329
Cdd:TIGR01770 416 IGAFYYLRVVKVMYF-DKPERRIPSNPQSKAQSLLLSISALFILFLGLF 463
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-337 |
7.08e-91 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 274.78 E-value: 7.08e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 1 MFNNSSKIVFFSILMMGTLISISANSWLGAWMGLEINLLSFIPLMSDNK-LMSTEASLKYFLTQALASSVFLFATILFLL 79
Cdd:MTH00160 1 MMMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKnLMSSESSLKYFLIQALASIILLFSIILNML 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 80 NSNkiNSNYFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLMLISYIIFKPLIIISIILSSMIGA 159
Cdd:MTH00160 81 NLM--LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNNFIIIIIILSAIIGA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 160 LGGLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKTSHINQLFTLNFHSKTMKFFLFF 239
Cdd:MTH00160 159 IGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 240 NLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYSAFMLNYYENNWMINSTYNSNYFVTFMT 319
Cdd:MTH00160 239 NLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFSLILNFL 318
|
330
....*....|....*...
gi 749111674 320 ySFFSSMGLFLIFSLYFL 337
Cdd:MTH00160 319 -SFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
6-295 |
1.09e-63 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 205.44 E-value: 1.09e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 6 SKIVFFSILMMGTLISISANSWLGAWMGLEINLLSFIPLMSDNKL-MSTEASLKYFLTQALASSVFLFATILFLLNSNKI 84
Cdd:MTH00112 5 AKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHpRATEAATKYFLTQAAASALILFSSTTNAWNTGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 85 N----SNYFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAP---LMLISYIIFKPLIIISIILSSMI 157
Cdd:MTH00112 85 DitqlTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPltlLLMTSNSLNPTLLLTLAILSTLI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 158 GALGGLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKTSHINQLFTLNFHSKTMKFFL 237
Cdd:MTH00112 165 GGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTL 244
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 749111674 238 FFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYSAFM 295
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTI 302
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
8-292 |
1.94e-62 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 202.38 E-value: 1.94e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 8 IVFFSILMMGTLISISANSWLGAWMGLEINLLSFIPLMSDNKLM-STEASLKYFLTQALASSVFLFATILFLLNSNKIN- 85
Cdd:MTH00105 7 IIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPrSTEAATKYFLTQATASMLLMMAIIINLMYSGQWTi 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 86 ---SNYFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLML---ISYIIFKPLIIISIILSSMIGA 159
Cdd:MTH00105 87 tklTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSIlyqISPSINPNLLLTLAILSILIGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 160 LGGLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKTSHINQLFTLNFHSKTMKFFLFF 239
Cdd:MTH00105 167 WGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILL 246
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 749111674 240 NLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYS 292
Cdd:MTH00105 247 TLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYS 299
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
9-292 |
1.13e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 192.71 E-value: 1.13e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 9 VFFSILMMGTLISISANSWLGAWMGLEINLLSFIPLMSDN-KLMSTEASLKYFLTQALASSVFLFATIL--FLLNSNKIN 85
Cdd:MTH00135 8 ILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHhHPRAVEATTKYFLTQATAAAMILFASTTnaWLTGQWDIQ 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 86 --SNYFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLMLISYIIF--KPLIIISIILSSMIGALG 161
Cdd:MTH00135 88 qmSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPtnPTLLITLGLTSTLVGGWG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 162 GLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKTSHINQLFTLNFHSKTMKFFLFFNL 241
Cdd:MTH00135 168 GLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLIL 247
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 749111674 242 LSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYS 292
Cdd:MTH00135 248 LSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYA 298
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
9-292 |
2.84e-58 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 191.67 E-value: 2.84e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 9 VFFSILMMGTLISISANSWLGAWMGLEINLLSFIPLMSDNKL-MSTEASLKYFLTQALASSVFLFATIL--FLLNSNKIN 85
Cdd:MTH00070 8 ILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHpRATEAATKYFLTQASASALILFSSTInaWFTGEWTIM 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 86 S--NYFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLML---ISYIIFKPLIIISIILSSMIGAL 160
Cdd:MTH00070 88 NmqTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALliqISHLLNSNLLIIMGLLSTLIGGW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 161 GGLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKTSHINQLFTLNFHSKTMKFFLFFN 240
Cdd:MTH00070 168 GGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMMLT 247
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 749111674 241 LLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYS 292
Cdd:MTH00070 248 LLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYA 299
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
3-338 |
2.09e-56 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 186.68 E-value: 2.09e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 3 NNSSKIVFFSILMMGTLISISANSWLGAWMGLEINLLSFIPLMSDN-KLMSTEASLKYFLTQALASSVFLFATIL--FLL 79
Cdd:MTH00041 2 NRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNfSPRSVEATIKYFLVQAFSAAILLNGALIqaWLS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 80 NSNKINS--NYFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLMLISYIIFKPLIIISIILSSMI 157
Cdd:MTH00041 82 GSWSINGplNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILS 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 158 ---GALGGLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKTSHINQLFTLNFHSKTMK 234
Cdd:MTH00041 162 vlvGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 235 FFLFFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYSAFMLNYYENNWMINSTYNSN-- 312
Cdd:MTH00041 242 FLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGni 321
|
330 340
....*....|....*....|....*...
gi 749111674 313 --YFVTFMTYSFFSSMGLFLIFSLYFLL 338
Cdd:MTH00041 322 tvYGVILSILSSISILGLLLIPLFLSFL 349
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
9-338 |
1.38e-50 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 171.69 E-value: 1.38e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 9 VFFSILMMGTLISISANSWLGAWMGLEINLLSFIPLMS-DNKLMSTEASLKYFLTQALASSVFLFATILFLLNSNKINSN 87
Cdd:MTH00200 8 LFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIkQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGIS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 88 YFM----EMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLML---ISYIIFKPLIIISIILSSMIGAL 160
Cdd:MTH00200 88 EMLgplsETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALliqLAPALNSNILLLLGLLSVLVGGW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 161 GGLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKTSHINQLFTLNFHSKTMKFFLFFN 240
Cdd:MTH00200 168 GGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLT 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 241 LLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSY-SAFMLNYYENNWMINSTYNSNYFVTFMT 319
Cdd:MTH00200 248 LLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYlTLLTLSPNQINMMSSWRTKSNSNLLVGL 327
|
330
....*....|....*....
gi 749111674 320 YSFFSSMGLFLIFSLYFLL 338
Cdd:MTH00200 328 LLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-329 |
7.86e-48 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 163.90 E-value: 7.86e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 5 SSKIVFFSILMMGTLISISANSWLGAWMGLEINLLSFIPLMSDNKLMST-EASLKYFLTQALASSVFLFATILFLLNSNk 83
Cdd:MTH00144 4 PSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSEsESVVKYFIIQSLGSSLLIFGSLIMYNLSF- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 84 insNYFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLMLISYIIFKPLIIISIILSSMI----GA 159
Cdd:MTH00144 83 ---SWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVISVLsalvGS 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 160 LGGLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKTSHINQLFTLNfHSKTMKFFLFF 239
Cdd:MTH00144 160 IGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLK-PSYKTGLSIIS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 240 NLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYSAFMLNYYENNWMINSTYNSNYFVTFMT 319
Cdd:MTH00144 239 LLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSSIISLNLL 318
|
330
....*....|
gi 749111674 320 YSFFSSMGLF 329
Cdd:MTH00144 319 GGLLFLLLYL 328
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
10-323 |
1.46e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 163.41 E-value: 1.46e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 10 FFSILMMGTLISISANSWLGAWMGLEINLLSFIPLMSDNKL-MSTEASLKYFLTQALASSVFLFATILFLLNSNKINSny 88
Cdd:MTH00011 11 FSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMnQESEAAVKYFLAQALGSGLLLLGMTMMWSFPSLLKN-- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 89 FMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLMLISYII---FKPLIIISIILSSMIGALGGLNQ 165
Cdd:MTH00011 89 ITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTshnILPMMTSMAAMSALAGGLGGMNQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 166 TSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKTSHINQLFTLNFHSKTMKFFLFFNLLSLG 245
Cdd:MTH00011 169 TQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLG 248
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 749111674 246 GLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYSAFMLNYYENNWMINSTYNSNYFVTFMTYSFF 323
Cdd:MTH00011 249 GLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPYEPKTKILISMCTLSL 326
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
9-321 |
4.60e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 143.27 E-value: 4.60e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 9 VFFSILMMGTLISISANSWLGAWMGLEINLLSFIPLMSDNKLMS-TEASLKYFLTQALASSVFLFATILFLLNsnkINSN 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITeNEGAMKYFLFQEFGSALLLMGGSLSFSN---LYLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 88 YFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLMLISYIIFKPLIIISI-ILSSMIGALGGLNQT 166
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGLLICsVLSSLIGGIGGMNQS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 167 SLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKTSHINQLFTLNFHSKTMKFFLFFNLLSLGG 246
Cdd:MTH00197 159 NIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGG 238
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 749111674 247 LPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYSAFMLNYYENNW-MINSTYNSNYFVTFMTYS 321
Cdd:MTH00197 239 LPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFlMKINLLYSGLFILLMMML 314
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
24-279 |
2.95e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 110.87 E-value: 2.95e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 24 ANSWLGAWMGLEINLLSFIPLMSDNK--LMSTEASLKYFLTQALASSVFLFATILFLLNSNKIN---------------S 86
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGksPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSfdelskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 87 NYFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLN-ALILMTWQKIAPLMLI--------SYIIFKPLIIISIILSSMI 157
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVsALLAATLVKAGGYGLIrrsllylpSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 158 GALGGLNQTSLRKLMAYSSINHLGWMLASM----YDSNLLWMTYFLFYTFLTFTMIFMFN-----MFKTSHINQLFTLNF 228
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGsviyrRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 749111674 229 HSKTMKFFLFFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMT 279
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
10-295 |
3.19e-24 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 102.59 E-value: 3.19e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 10 FFSILMM---GTLISISANSWLGAWMGLEINLLSFIPL--MSDNKLMSTEASLKYFLTQALASSVFL------------- 71
Cdd:PRK05777 105 FYLLVLFallGMMVMVSANDLLTLFLGLELLSLPLYALaaLRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgsl 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 72 -FATILFLLNSNKINSN--YFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIA---PLMLISYIIFKP 145
Cdd:PRK05777 185 sFAGIAKALADGSGNSLllLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAafaVLLRLLVVAFGG 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 146 LIIISIILSS-------MIGALGGLNQTSLRKLMAYSSINHLGWMLA-------SMYDSNLLWMTYFLFYTFLTFTMIFM 211
Cdd:PRK05777 265 LSEDWQQVLAiiaiasmLVGNLAALSQTNIKRLLAYSSIAHAGYLLVglaagtaEGYSAVLFYLLAYLFMTLGAFGVISL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 212 F--NMFKTSHINQLFTLNFHSKTMKFFLFFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRL 289
Cdd:PRK05777 345 LrrKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
....*.
gi 749111674 290 SYSAFM 295
Cdd:PRK05777 425 IKLMYF 430
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-295 |
7.85e-24 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 101.35 E-value: 7.85e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 10 FFSILMMGTL---ISISANSWLGAWMGLEINLLSFIPL--MSDNKLMSTEASLKYFLTQALASSVFLF------------ 72
Cdd:COG1007 104 FYALLLFATLgmmLMASANDLLTLFLGLELLSLSLYVLvaFRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgsl 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 73 --ATILFLLNSNKINSNYFME--MMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIA---PLMLISYIIFKP 145
Cdd:COG1007 184 nlAGIAAALAAGGANSPLLLLglVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAafaALLRLLVEAFPG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 146 LIIISIILSSM-------IGALGGLNQTSLRKLMAYSSINHLGWMLASM-------YDSNLLWMTYFLFYTFLTFTMIFM 211
Cdd:COG1007 264 LAADWQLLLAVlavlsmtVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLaagtplgVSAALFYLLAYLFMNLGAFAVILL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 212 F--NMFKTSHINQLFTLNFHSKTMKFFLFFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRL 289
Cdd:COG1007 344 LsrKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRV 423
|
....*.
gi 749111674 290 SYSAFM 295
Cdd:COG1007 424 VKAMYF 429
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
16-289 |
9.08e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 100.10 E-value: 9.08e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 16 MGTLISISANSWLGAWMGLEINLLSFIPLMSDNK--LMSTEASLKYFLTQALASSVFLFATIL--------------FLL 79
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRgsGYSAEAGLKYFVLGALSSGLFLFGCALlcgttgglhlsyinLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 80 NSNKINSNYFMEM---MIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPL-MLISYIIFKPLIIISIILSS 155
Cdd:MTH00196 84 NSGQSFSSVSVPIgylLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFsILVSIGLNVNILLIGGLFSL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 156 MIGALGGLNQTSLRKLMAYSSINHLGWMLASMYDSN-------LLWMTYFLFYTFLTFTMIFMFNmFKTSHINQLFTLNF 228
Cdd:MTH00196 164 FVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiqasLVYLFIYIIMSICVFSIILALN-VYKNLIIEFSGLSR 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 749111674 229 HSKTMKFFLFFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRL 289
Cdd:MTH00196 243 RLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
5-338 |
4.53e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 96.24 E-value: 4.53e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 5 SSKIVFFSILMMGTLISISANSWLGAWMGLEINLLSFIPL--MSDNKLMSTEASLKYFLTQALASSVFLFATILFLLNSN 82
Cdd:MTH00199 97 QSSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILvaLKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 83 K-----INSNYFME---MMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLMLISYIIFKPLIIIS-IIL 153
Cdd:MTH00199 177 EtsiqgINSILTGDvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIcAVL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 154 SSMIGALGGLNQTSLRKLMAYSSINHLGWMLA-------SMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKtSHINQLFTL 226
Cdd:MTH00199 257 SIIYGAIGALNQTKIKRLLAYSGIGHMGFILFgvaigsfESIQASLIYMIIYVIMSICSFSIILSLKLTK-GLIVEVSGL 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 227 NFHSKTMKFFLFFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRL-SYSAFMLNYYENNW-- 303
Cdd:MTH00199 336 SRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVvQIIYFQADYSILIWqk 415
|
330 340 350
....*....|....*....|....*....|....*
gi 749111674 304 MINSTYNSNYFVTFMTYSFFsSMGLFLIFSLYFLL 338
Cdd:MTH00199 416 VLKKEERLDLSKSILIGVTF-FIILFLMISPNFLL 449
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
2-329 |
8.36e-19 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 86.93 E-value: 8.36e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 2 FNNSSKIVFFSILM---MGTLISISANSWLGAWMGLEINLLSFIPLMS--DNKLMSTEASLKYFLTQALASSVFLF---- 72
Cdd:TIGR01770 96 KEKINKFEFYILLLfalLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlkRKSRFSTEAGLKYFILGAFSSGLLLFgisl 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 73 -----------ATILFLLNSNKINSNYFMEM-MIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLMLI-- 138
Cdd:TIGR01770 176 iygftgslnfeDLLLFLSNGMLNISLLLLGIvLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFlr 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 139 --------SYIIFKPLIIISIILSSMIGALGGLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFY--------- 201
Cdd:TIGR01770 256 lflyilfgFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYifiyalmsl 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 202 -TFLTFTMIFMFNMFKTSHINQLFTLNFHSKTMKFFLFFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTL 280
Cdd:TIGR01770 336 gAFGVLSLLRSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSV 415
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 749111674 281 ITLYFYIRLSYSAFMlNYYENNWMINSTYNSNYFVTFMTYSFFSSMGLF 329
Cdd:TIGR01770 416 IGAFYYLRVVKVMYF-DKPERRIPSNPQSKAQSLLLSISALFILFLGLF 463
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
13-289 |
2.21e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 73.74 E-value: 2.21e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 13 ILMMGTLISISANSWLGAWMGLEINLLSFIPLMSDNKLMST----------EASLKYFLTQALASSVFLFATILF----- 77
Cdd:MTH00198 196 IVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGShfpspgntppESGLKYWILGAMSSGFYLFGCALYfgftg 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 78 -------LLNSNKINSNYFME------MMIFSSLLLKSGSAPFHFWFPNVMEGL-SWLNALILMTWQKIAPLMLISYIIF 143
Cdd:MTH00198 276 negmlgtILSATLETTNIELRqgslgyLFITVAILFKLAAAPFHMWTPDVYEGApTPTTALIAIIPKFTVYILLTSLVIT 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 144 KPLIIISIILSSMIGALGGLNQTSLRKLMAYSSINHLGWML----ASMYDSNLLWMTYFLFY---TFLTFTMIFMFNMFK 216
Cdd:MTH00198 356 SKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILigvsAGTYESLQASWTYAVTYlvsALASFTVICTLEEFG 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 217 TSH---------------INQLFTLNFHSKT---MKFFLFFNLLSLGGLPPFLGFLPKWLVIQ-------SLTMNNQLFL 271
Cdd:MTH00198 436 TRTptsrqrdgsfgnynlVRRLVDLTILSRGqpyIAFSLAIVFLSLAGIPPLLGFLGKWFILVgsikiafSSSLSIYYLV 515
|
330
....*....|....*...
gi 749111674 272 LTFMVLMTLITLYFYIRL 289
Cdd:MTH00198 516 ALFAIICTCISAFYYIRI 533
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-295 |
6.11e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 63.19 E-value: 6.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 54 EASLKYFLTQALASSVFLFATILFLLNSNKINSNYFMEMMI--------------FSSLLLKSGSAPFHFWFPNVM-EGL 118
Cdd:PRK08376 172 EAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSenptvvakialalfIAGLAMKSGAVPVHMWLPDAYpAAP 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 119 SWLNALILMTWQ-KIAPLMLISYIIFKPLIIISII---------LSSMIGALGGLNQTSLRKLMAYSSINHLGWML---- 184
Cdd:PRK08376 252 SSISAMLLVIKQaGLYALARVLFSIYGPAINLATVgwviiilgcLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLlglg 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 185 --------ASMYDSNLLWMTYFLFYTF--------LTFTMIFMFNMFKTSHINQLFTLnfhSKTMKFFLFFNL---LSLG 245
Cdd:PRK08376 332 vglaalgdPAMASYGEIALAGGIYHIVnhalykalLFLTAGAVIYETGTRNLNELGGL---ARTMPKTTIAFLigaAAIV 408
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 749111674 246 GLPPFLGFLPKWLVIQSLTMNNQLfLLTFMVLMTLITLYFYIRLSYSAFM 295
Cdd:PRK08376 409 GLPPFNGFASKWLIYESSALFNPI-LGVIAMIGSVLTLASFVKVFHTAFF 457
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
10-293 |
2.88e-10 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 60.93 E-value: 2.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 10 FFSILMMGTLISISANSWLGAWMGLEINLL-SFIPLMSDNKLMSTEASLKYFLTQALASSVFLFATILFLLNSNKINSNY 88
Cdd:COG0651 112 LFLLLLAGMNGAFLTGDLFNLFVFFEVMLLaSYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMAD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 89 FME--------------MMIFSSLLLKSGSAPFHFWFPNVM-EGLSWLNALI--LMTwqKIAP--LMLISYIIFKPLIII 149
Cdd:COG0651 192 LAArlaeldpglllaafALLLVGFGIKAALFPLHFWLPDAYpAAPSPVSALLsgLLT--KVGVyaILRVLTLLFGADPAL 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 150 SIILSSM--------IGALGGLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFltFTMIFMFNMF------ 215
Cdd:COG0651 270 FLGTLLLvlglltmlVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLL--NHALAKALLFlaagai 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 216 ----KTSHINQLFTLNFHSKTMKFFLFFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSY 291
Cdd:COG0651 348 eratGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFG 427
|
..
gi 749111674 292 SA 293
Cdd:COG0651 428 RA 429
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
52-288 |
2.58e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 51.98 E-value: 2.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 52 STEASLKYFLTQALASSVFLF-ATILFLLNSNKINSNYFMEMMIFSSLLL--------------KSGSAPFHFWFPNVME 116
Cdd:PRK02504 159 SNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAIALALITSPSLGlalalvfviagiafKISAVPFHQWTPDVYE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 117 GLSWLNALILMTWQKIAPLMLISYII----------FKPLIIISIILSSMIGALGGLNQTSLRKLMAYSSINHLGWMLAS 186
Cdd:PRK02504 239 GSPTPVVAFLSVGSKAAGFALAIRLLvtafpsfdeqWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIG 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 187 M-------YDSNLLWMTYFLFYTFLTFTMIFMFNMFK-TSHINQLFTLNFHSKTMKFFLFFNLLSLGGLPPFLGFLPK-- 256
Cdd:PRK02504 319 LvagteagYASMVFYLLAYLFMNLGAFACVILFSLRTgTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKiy 398
|
250 260 270
....*....|....*....|....*....|....*
gi 749111674 257 --WLVIQsltmnNQLFLLTFMVLMT-LITLYFYIR 288
Cdd:PRK02504 399 lfWAGWQ-----AGLYLLVLVGLVTsVISIYYYIR 428
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
34-295 |
4.25e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 51.42 E-value: 4.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 34 LEINLLSFIPLMSDNK-LMSTEASLKYFLTQALASSVFLFATILFLLNSNKINSNYFMEM------------MIFSSLLL 100
Cdd:PRK08375 135 LEIMSLSSYALVAMGGdRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGAlaenptvvtafgFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 101 KSGSAPFHFWFPNVM-EGLSWLNALILMTWQKIA--PLMLISYIIFKPLIIISIILSSMI----------GALGGLNQTS 167
Cdd:PRK08375 215 KAAVFPLHTWLPRAYpAAPPVVTALLSGLVTKVAvyALIRIYFTVFGGDFRFALGLGWLLavlallsmlvGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 168 LRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFL-TFTMIFMF----NMFKTSHINQLFTLNFHSKTMKFFLFFNLL 242
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHhALMKGALFlaagAIEVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 749111674 243 S---LGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYSAFM 295
Cdd:PRK08375 375 AslsLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFF 430
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
88-324 |
3.07e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 47.94 E-value: 3.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 88 YFMEMMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALILMTWQKIaPLMLISYIIFKPLIIISIILSSMIGALGGLNQTS 167
Cdd:MTH00091 57 FSFGYFQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKL-PFLLVLLQFFSKNFFFLLLFGLLICFFQMFLLKS 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 168 LRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFYTFLTFTMIFMFNMFKTSHINQLFTLNFhsktmkfflffnllsLGGL 247
Cdd:MTH00091 136 YKNLLILSSTESFNWLILSFFFSFFNVFFLFFYYFLLMLFLIPKFNNVNKLNFVSWETLLV---------------FMNL 200
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 749111674 248 PPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMtlitlyFYIRLSYSAFMLNYYENNWMINSTYNSNYFVTFMTYSFFS 324
Cdd:MTH00091 201 PFSVTFFVKIFSLSEILKVLGFFLLFLLFLM------FLSVLSLSFWLVNLSTKLFLMLFKYNKGFFFFFLPLMLLS 271
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-294 |
1.55e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 46.50 E-value: 1.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 54 EASLKYFLTQALASSVFLFATILFL-----LN----SNKINSNYFMEMM----------------IFSSLLLKSGSAPFH 108
Cdd:PRK12667 164 EAAIKYALIGAVGTTLYFLALAFLYatfgtLNmadlSAKIRGLSFPLTGglagnpplalgvalalALWAFTIKAAIFPNH 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 109 FWFPNVM-EGLSWLNALI--LMTWQKIAPLMLISYIIFK------PLIIISIILSSMIGALGGL-------NQTSLRKLM 172
Cdd:PRK12667 244 FWLPDAHpAAPSPVSAMLsgLVVNVGAYAIIRFLYTIFGispsliDFRAALSPILIILGAVSAIigalmmvVQKDVKRLL 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 173 AYSSINHLGWMLASMYDSNLLWMTYFLFYTF---LTFTMIFM-----FNMFKTSHINQLFTLNFHSKTMKFFLFFNLLSL 244
Cdd:PRK12667 324 AYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaIAKSLLFLasgvfIHAAGTRDIDELAGLGRKMPIASFAFLIGALSL 403
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 749111674 245 GGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYSAF 294
Cdd:PRK12667 404 VGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLF 453
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
52-289 |
3.37e-05 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 45.38 E-value: 3.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 52 STEASLKYFLTQALASSVFLFATILF----------------LLNSNKINS--NYFMEMMIFSSLLLKSGSAPFHFWFPN 113
Cdd:CHL00049 160 SNEATMKYLLMGGASSSILVYGFSWLyglsggeielqeivngLINTQMYNSpgISIALIFITVGIGFKLSLAPFHQWTPD 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 114 VMEGLSWLNALILMTWQKIAPLML---ISYIIFKPLII-------ISIILSSMIGALGGLNQTSLRKLMAYSSINHLGWM 183
Cdd:CHL00049 240 VYEGSPTPVVAFLSVTSKVAASALatrIFDIPFYFSSNewhllleILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYV 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 184 LASMYDSNLLW-----MTYFLFYTFL---TFTMIFMFNMFK-TSHINQLFTLNFHSKTMKFFLFFNLLSLGGLPPFLGFL 254
Cdd:CHL00049 320 IIGIIVGDSNDgyasmITYMLFYIFMnlgTFACIVLFGLRTgTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFF 399
|
250 260 270
....*....|....*....|....*....|....*
gi 749111674 255 PKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRL 289
Cdd:CHL00049 400 GKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
158-294 |
3.54e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 42.24 E-value: 3.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 158 GALGGLNQTSLRKLMAYSSINHLGWMLASMYDSNLLWMTYFLFY--------TFLTFTMIFMFNMFKTSHINQLFTLNFH 229
Cdd:PRK12663 286 GALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYlvhdmvvkTALFLIAGSLVRLTGYRSLQYLGGLYRK 365
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 749111674 230 SKTMKFFLFFNLLSLGGLPPFLGFLPKWLVIQSLTMNNQLFLLTFMVLMTLITLYFYIRLSYSAF 294
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
92-185 |
2.09e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 40.03 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 92 MMIFSSLLLKSGSAPFHFWFPNVMEGLSWLNALI---LMTWQKIAPLMLISYI-----IFKPLIIISIILSSMIGALGGL 163
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLhaaAVVKAGIYLLLRFSPVfhdvaVWNWLLIIVGMITALMGAVFAV 291
|
90 100
....*....|....*....|..
gi 749111674 164 NQTSLRKLMAYSSINHLGWMLA 185
Cdd:PRK12650 292 QKTDLKKLTAYSTVSQLGWIVA 313
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
101-187 |
5.37e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 38.47 E-value: 5.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 749111674 101 KSGSAPFHFWFPNVMEGLSWLNALILMTWQKIAPLMLIS--YIIFKPLIIISII------LSSMIGALGGLNQTSLRKLM 172
Cdd:PRK07376 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVArmYPVFEQFPAVMTViawtgaITAFLGASIALTQNDIKKGL 319
|
90
....*....|....*
gi 749111674 173 AYSSINHLGWMLASM 187
Cdd:PRK07376 320 AYSTISQLGYMVMAM 334
|
|
| |
