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Conserved domains on  [gi|748365112|gb|AJE60690|]
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cytochrome b, partial (mitochondrion) [Terrapene carolina carolina]

Protein Classification

cytochrome b( domain architecture ID 11475906)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), a respiratory chain that generates an electrochemical potential coupled to ATP synthesis

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
1-361 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 670.84  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00119  15 INNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFIC 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00119  95 IYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNP 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00119 175 TLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDP 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00119 255 ENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLL 334
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00119 335 ILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALEN 375
 
Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
1-361 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 670.84  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00119  15 INNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFIC 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00119  95 IYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNP 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00119 175 TLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDP 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00119 255 ENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLL 334
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00119 335 ILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALEN 375
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
3-360 2.01e-120

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 353.33  E-value: 2.01e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   3 NSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIY 82
Cdd:COG1290   25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  83 LHIGRGIYYGSylYKE----TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVD 158
Cdd:COG1290  105 LHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 159 NATLTRFFTFH-FLLPFTIMGLTVMHLLFLHETGSNNPTG----LNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFF 233
Cdd:COG1290  183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 234 PNllGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQIL 311
Cdd:COG1290  263 PI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 748365112 312 FWSLIANLLVLTWIGGQPVenPFIIIGQVASILYSLILLILMPMAGMIE 360
Cdd:COG1290  341 GVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
1-193 1.53e-90

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 270.01  E-value: 1.53e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:cd00284    6 VNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLM 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSY--LYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVD 158
Cdd:cd00284   86 LYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVD 165
                        170       180       190
                 ....*....|....*....|....*....|....*
gi 748365112 159 NATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSN 193
Cdd:cd00284  166 NATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
5-191 1.21e-82

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 249.61  E-value: 1.21e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112    5 FIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLH 84
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   85 IGRGIYYG--SYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATL 162
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
                         170       180
                  ....*....|....*....|....*....
gi 748365112  163 TRFFTFHFLLPFTIMGLTVMHLLFLHETG 191
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
245-326 1.59e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 56.34  E-value: 1.59e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQF-RPLTQILFwsLIANLLVLt 323
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVF--LFGTVVAL- 141

                  ...
gi 748365112  324 WIG 326
Cdd:TIGR01156 142 WLG 144
 
Name Accession Description Interval E-value
CYTB MTH00119
cytochrome b; Provisional
1-361 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 670.84  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00119  15 INNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFIC 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00119  95 IYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNP 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00119 175 TLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDP 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00119 255 ENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLL 334
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00119 335 ILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALEN 375
CYTB MTH00131
cytochrome b; Provisional
1-361 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 646.71  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00131  14 ANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFIC 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00131  94 IYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNA 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00131 174 TLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDP 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00131 254 DNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVL 333
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00131 334 ILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLEN 374
CYTB MTH00100
cytochrome b; Provisional
1-361 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 641.30  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00100  14 INHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFIC 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00100  94 LFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKA 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00100 174 TLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDP 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00100 254 DNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLL 333
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00100 334 TLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIEN 374
CYTB MTH00074
cytochrome b; Provisional
1-361 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 637.11  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00074  15 INNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFIC 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00074  95 IYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKA 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00074 175 TLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDP 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00074 255 DNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTL 334
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00074 335 ILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLEN 375
CYTB MTH00191
cytochrome b; Provisional
1-341 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 605.76  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00191  11 VNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFIC 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00191  91 IYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNA 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00191 171 TLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDP 250
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00191 251 ENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFI 330
                        330       340
                 ....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVA 341
Cdd:MTH00191 331 LLTWLGGQPVEDPFILLGQIS 351
CYTB MTH00156
cytochrome b; Provisional
1-340 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 592.14  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00156   4 INNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFIC 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00156  84 IYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNA 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00156 164 TLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDP 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00156 244 ENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVI 323
                        330       340
                 ....*....|....*....|
gi 748365112 321 VLTWIGGQPVENPFIIIGQV 340
Cdd:MTH00156 324 LLTWIGARPVEEPYILTGQI 343
CYTB MTH00034
cytochrome b; Validated
1-361 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 567.80  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00034  14 LNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFIC 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00034  94 LYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNA 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00034 174 TLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDP 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00034 254 ENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFF 333
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00034 334 ILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLEN 374
CYTB MTH00145
cytochrome b; Provisional
1-341 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 564.53  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00145  15 VNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFIC 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00145  95 IYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNA 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00145 175 TLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDP 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00145 255 ENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFF 334
                        330       340
                 ....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVA 341
Cdd:MTH00145 335 ILTWIGACPVEEPYETIGQVF 355
CYTB MTH00016
cytochrome b; Validated
1-340 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 538.88  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00016  15 MNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFIC 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00016  95 LYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNA 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00016 175 TLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDP 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00016 255 ENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFL 334
                        330       340
                 ....*....|....*....|
gi 748365112 321 VLTWIGGQPVENPFIIIGQV 340
Cdd:MTH00016 335 LLTWIGGRPVEPPYEFLGQI 354
CYTB MTH00053
cytochrome b; Provisional
1-361 2.07e-175

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 492.30  E-value: 2.07e-175
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00053  15 VNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLC 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00053  95 VYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNA 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00053 175 TLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDA 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00053 255 ENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFF 334
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00053 335 LLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLEN 375
CYTB MTH00022
cytochrome b; Validated
1-361 3.24e-173

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 486.90  E-value: 3.24e-173
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00022  13 VNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLC 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00022  93 LYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNA 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00022 173 TLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDP 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00022 253 ENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFI 332
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00022 333 LLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELEN 373
CYTB MTH00224
cytochrome b; Provisional
1-340 2.72e-169

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 476.72  E-value: 2.72e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00224  15 LNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLF 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00224  95 IYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNA 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00224 175 TLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDP 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00224 255 ENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWA 334
                        330       340
                 ....*....|....*....|
gi 748365112 321 VLTWIGGQPVENPFIIIGQV 340
Cdd:MTH00224 335 ILTWIGGRPVEDPFEGIGQV 354
CYTB MTH00033
cytochrome b; Provisional
3-361 2.61e-130

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 378.13  E-value: 2.61e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   3 NSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIY 82
Cdd:MTH00033  13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  83 LHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATL 162
Cdd:MTH00033  93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 163 TRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLAL--FFPNLLGDP 240
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIepRIETLLQDP 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 748365112 321 VLTWIGGQPV-ENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
3-360 2.01e-120

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 353.33  E-value: 2.01e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   3 NSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIY 82
Cdd:COG1290   25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  83 LHIGRGIYYGSylYKE----TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVD 158
Cdd:COG1290  105 LHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 159 NATLTRFFTFH-FLLPFTIMGLTVMHLLFLHETGSNNPTG----LNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFF 233
Cdd:COG1290  183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 234 PNllGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQIL 311
Cdd:COG1290  263 PI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 748365112 312 FWSLIANLLVLTWIGGQPVenPFIIIGQVASILYSLILLILMPMAGMIE 360
Cdd:COG1290  341 GVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
CYTB MTH00086
cytochrome b; Provisional
1-340 1.05e-115

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 339.61  E-value: 1.05e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00086   3 VNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00086  83 LYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSA 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDlLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00086 163 TLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLGDP 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSkqrTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00086 242 EMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNV 318
                        330       340
                 ....*....|....*....|
gi 748365112 321 VLTWIGGQPVENPFIIIGQV 340
Cdd:MTH00086 319 ILSWLGQCLVEYPFLFLSQI 338
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
1-193 1.53e-90

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 270.01  E-value: 1.53e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:cd00284    6 VNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLM 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSY--LYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVD 158
Cdd:cd00284   86 LYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVD 165
                        170       180       190
                 ....*....|....*....|....*....|....*
gi 748365112 159 NATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSN 193
Cdd:cd00284  166 NATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
1-340 3.58e-85

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 261.84  E-value: 3.58e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00046   5 IRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFIL 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00046  85 LFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGV 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGL-NSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGD 239
Cdd:MTH00046 165 TLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLD 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 240 PDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGvLALLMSILVLFLMPALHTSkqrtTQFRPLTQILFWSLIANL 319
Cdd:MTH00046 245 IEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVPTFNGS----SVYSVWRQVNFWLIVSLF 319
                        330       340
                 ....*....|....*....|.
gi 748365112 320 LVLTWIGGQPVENPFIIIGQV 340
Cdd:MTH00046 320 FSLSYLGGCHPEYPYLLISQL 340
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
5-191 1.21e-82

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 249.61  E-value: 1.21e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112    5 FIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLH 84
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   85 IGRGIYYG--SYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATL 162
Cdd:pfam00033  81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
                         170       180
                  ....*....|....*....|....*....
gi 748365112  163 TRFFTFHFLLPFTIMGLTVMHLLFLHETG 191
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
194-341 7.39e-53

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 171.67  E-value: 7.39e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 194 NPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPN 273
Cdd:cd00290    1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 748365112 274 KLGGVLALLMSILVLFLMPALHTSKQRtTQFRPLTQILFWSLIANLLVLTWIGGQPVENPFIIIGQVA 341
Cdd:cd00290   81 KLLGVLAMAASILSLFLVPFLENSNKR-SQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
245-341 2.69e-46

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 153.02  E-value: 2.69e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLLVLTW 324
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
                          90
                  ....*....|....*..
gi 748365112  325 IGGQPVENPFIIIGQVA 341
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIA 97
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
75-240 8.61e-41

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 141.22  E-value: 8.61e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112   75 SLFFMCIYLHIGRGIYYGSYLYKE--TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIW 152
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  153 GGFSVDNATLTRFFTFHF-LLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLAL 231
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160

                  ....*....
gi 748365112  232 FFPNLLGDP 240
Cdd:pfam13631 161 INPIWLGGP 169
PRK03735 PRK03735
cytochrome b6; Provisional
20-195 6.86e-36

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 130.22  E-value: 6.86e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  20 FGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLHIGRGIYYGSYLYKE- 98
Cdd:PRK03735  44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  99 -TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATLTRFFTFH-FLLPFTI 176
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
                        170
                 ....*....|....*....
gi 748365112 177 MGLTVMHLLFLHETGSNNP 195
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
petB CHL00070
cytochrome b6
11-195 1.58e-30

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 115.59  E-value: 1.58e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  11 PSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLHIGRGIY 90
Cdd:CHL00070  27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  91 YGSYLYKE--TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATLTRFFTF 168
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
                        170       180
                 ....*....|....*....|....*...
gi 748365112 169 H-FLLPFTIMGLTVMHLLFLHETGSNNP 195
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
245-326 1.43e-09

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 56.34  E-value: 1.43e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQF-RPLTQILFwslIANLLVLT 323
Cdd:COG5679   66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPVATAVF---LFGTLVTL 142

                 ...
gi 748365112 324 WIG 326
Cdd:COG5679  143 WLG 145
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
245-326 1.59e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 56.34  E-value: 1.59e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112  245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQF-RPLTQILFwsLIANLLVLt 323
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVF--LFGTVVAL- 141

                  ...
gi 748365112  324 WIG 326
Cdd:TIGR01156 142 WLG 144
petD CHL00058
cytochrome b6/f complex subunit IV
245-326 6.55e-09

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 54.24  E-value: 6.55e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQF-RPLTQILFwslIANLLVLT 323
Cdd:CHL00058  65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFrRPVATTVF---LIGTAVAL 141

                 ...
gi 748365112 324 WIG 326
Cdd:CHL00058 142 WLG 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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