|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-361 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 670.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00119 15 INNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFIC 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00119 95 IYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNP 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00119 175 TLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00119 255 ENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLL 334
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00119 335 ILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALEN 375
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
3-360 |
2.01e-120 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 353.33 E-value: 2.01e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 3 NSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIY 82
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 83 LHIGRGIYYGSylYKE----TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVD 158
Cdd:COG1290 105 LHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 159 NATLTRFFTFH-FLLPFTIMGLTVMHLLFLHETGSNNPTG----LNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFF 233
Cdd:COG1290 183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 234 PNllGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQIL 311
Cdd:COG1290 263 PI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 748365112 312 FWSLIANLLVLTWIGGQPVenPFIIIGQVASILYSLILLILMPMAGMIE 360
Cdd:COG1290 341 GVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-193 |
1.53e-90 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 270.01 E-value: 1.53e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:cd00284 6 VNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLM 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSY--LYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVD 158
Cdd:cd00284 86 LYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVD 165
|
170 180 190
....*....|....*....|....*....|....*
gi 748365112 159 NATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSN 193
Cdd:cd00284 166 NATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
5-191 |
1.21e-82 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 249.61 E-value: 1.21e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 5 FIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLH 84
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 85 IGRGIYYG--SYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATL 162
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 748365112 163 TRFFTFHFLLPFTIMGLTVMHLLFLHETG 191
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
245-326 |
1.59e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.34 E-value: 1.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQF-RPLTQILFwsLIANLLVLt 323
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVF--LFGTVVAL- 141
|
...
gi 748365112 324 WIG 326
Cdd:TIGR01156 142 WLG 144
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-361 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 670.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00119 15 INNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFIC 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00119 95 IYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNP 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00119 175 TLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00119 255 ENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLL 334
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00119 335 ILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALEN 375
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-361 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 646.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00131 14 ANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFIC 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00131 94 IYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00131 174 TLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDP 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00131 254 DNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVL 333
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00131 334 ILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLEN 374
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-361 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 641.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00100 14 INHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFIC 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00100 94 LFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00100 174 TLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDP 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00100 254 DNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLL 333
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00100 334 TLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIEN 374
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-361 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 637.11 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00074 15 INNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFIC 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00074 95 IYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00074 175 TLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00074 255 DNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTL 334
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00074 335 ILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLEN 375
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-341 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 605.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00191 11 VNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFIC 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00191 91 IYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNA 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00191 171 TLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDP 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00191 251 ENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFI 330
|
330 340
....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVA 341
Cdd:MTH00191 331 LLTWLGGQPVEDPFILLGQIS 351
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-340 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 592.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00156 4 INNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFIC 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00156 84 IYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00156 164 TLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDP 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00156 244 ENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVI 323
|
330 340
....*....|....*....|
gi 748365112 321 VLTWIGGQPVENPFIIIGQV 340
Cdd:MTH00156 324 LLTWIGARPVEEPYILTGQI 343
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-361 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 567.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00034 14 LNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFIC 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00034 94 LYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00034 174 TLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDP 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00034 254 ENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFF 333
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00034 334 ILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLEN 374
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-341 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 564.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00145 15 VNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFIC 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00145 95 IYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00145 175 TLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00145 255 ENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFF 334
|
330 340
....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVA 341
Cdd:MTH00145 335 ILTWIGACPVEEPYETIGQVF 355
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-340 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 538.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00016 15 MNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFIC 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00016 95 LYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00016 175 TLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00016 255 ENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFL 334
|
330 340
....*....|....*....|
gi 748365112 321 VLTWIGGQPVENPFIIIGQV 340
Cdd:MTH00016 335 LLTWIGGRPVEPPYEFLGQI 354
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-361 |
2.07e-175 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 492.30 E-value: 2.07e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00053 15 VNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLC 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00053 95 VYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00053 175 TLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDA 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00053 255 ENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFF 334
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00053 335 LLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLEN 375
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-361 |
3.24e-173 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 486.90 E-value: 3.24e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00022 13 VNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLC 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00022 93 LYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNA 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00022 173 TLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00022 253 ENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFI 332
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 748365112 321 VLTWIGGQPVENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00022 333 LLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELEN 373
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-340 |
2.72e-169 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 476.72 E-value: 2.72e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00224 15 LNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLF 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00224 95 IYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNA 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00224 175 TLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00224 255 ENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWA 334
|
330 340
....*....|....*....|
gi 748365112 321 VLTWIGGQPVENPFIIIGQV 340
Cdd:MTH00224 335 ILTWIGGRPVEDPFEGIGQV 354
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
3-361 |
2.61e-130 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 378.13 E-value: 2.61e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 3 NSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIY 82
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 83 LHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATL 162
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 163 TRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLAL--FFPNLLGDP 240
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIepRIETLLQDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 748365112 321 VLTWIGGQPV-ENPFIIIGQVASILYSLILLILMPMAGMIEN 361
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
3-360 |
2.01e-120 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 353.33 E-value: 2.01e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 3 NSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIY 82
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 83 LHIGRGIYYGSylYKE----TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVD 158
Cdd:COG1290 105 LHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 159 NATLTRFFTFH-FLLPFTIMGLTVMHLLFLHETGSNNPTG----LNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFF 233
Cdd:COG1290 183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 234 PNllGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQIL 311
Cdd:COG1290 263 PI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 748365112 312 FWSLIANLLVLTWIGGQPVenPFIIIGQVASILYSLILLILMPMAGMIE 360
Cdd:COG1290 341 GVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-340 |
1.05e-115 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 339.61 E-value: 1.05e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00086 3 VNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00086 83 LYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDlLGLILMLALLLTLALFFPNLLGDP 240
Cdd:MTH00086 163 TLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLGDP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 241 DNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSkqrTTQFRPLTQILFWSLIANLL 320
Cdd:MTH00086 242 EMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNV 318
|
330 340
....*....|....*....|
gi 748365112 321 VLTWIGGQPVENPFIIIGQV 340
Cdd:MTH00086 319 ILSWLGQCLVEYPFLFLSQI 338
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-193 |
1.53e-90 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 270.01 E-value: 1.53e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:cd00284 6 VNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLM 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSY--LYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVD 158
Cdd:cd00284 86 LYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVD 165
|
170 180 190
....*....|....*....|....*....|....*
gi 748365112 159 NATLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSN 193
Cdd:cd00284 166 NATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-340 |
3.58e-85 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 261.84 E-value: 3.58e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 1 INNSFIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMC 80
Cdd:MTH00046 5 IRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFIL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 81 IYLHIGRGIYYGSYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNA 160
Cdd:MTH00046 85 LFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 161 TLTRFFTFHFLLPFTIMGLTVMHLLFLHETGSNNPTGL-NSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGD 239
Cdd:MTH00046 165 TLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLD 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 240 PDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGvLALLMSILVLFLMPALHTSkqrtTQFRPLTQILFWSLIANL 319
Cdd:MTH00046 245 IEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVPTFNGS----SVYSVWRQVNFWLIVSLF 319
|
330 340
....*....|....*....|.
gi 748365112 320 LVLTWIGGQPVENPFIIIGQV 340
Cdd:MTH00046 320 FSLSYLGGCHPEYPYLLISQL 340
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
5-191 |
1.21e-82 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 249.61 E-value: 1.21e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 5 FIDLPSPSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLH 84
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 85 IGRGIYYG--SYLYKETWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATL 162
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 748365112 163 TRFFTFHFLLPFTIMGLTVMHLLFLHETG 191
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
194-341 |
7.39e-53 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 171.67 E-value: 7.39e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 194 NPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLALFFPNLLGDPDNFTPANPLSTPPHIKPEWYFLFAYAILRSIPN 273
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 748365112 274 KLGGVLALLMSILVLFLMPALHTSKQRtTQFRPLTQILFWSLIANLLVLTWIGGQPVENPFIIIGQVA 341
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKR-SQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
245-341 |
2.69e-46 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 153.02 E-value: 2.69e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQFRPLTQILFWSLIANLLVLTW 324
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90
....*....|....*..
gi 748365112 325 IGGQPVENPFIIIGQVA 341
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIA 97
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
75-240 |
8.61e-41 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 141.22 E-value: 8.61e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 75 SLFFMCIYLHIGRGIYYGSYLYKE--TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIW 152
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 153 GGFSVDNATLTRFFTFHF-LLPFTIMGLTVMHLLFLHETGSNNPTGLNSNTDKIPFHPYFSYKDLLGLILMLALLLTLAL 231
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 748365112 232 FFPNLLGDP 240
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
20-195 |
6.86e-36 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 130.22 E-value: 6.86e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 20 FGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLHIGRGIYYGSYLYKE- 98
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 99 -TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATLTRFFTFH-FLLPFTI 176
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170
....*....|....*....
gi 748365112 177 MGLTVMHLLFLHETGSNNP 195
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
|
|
| petB |
CHL00070 |
cytochrome b6 |
11-195 |
1.58e-30 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 115.59 E-value: 1.58e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 11 PSNISAWWNFGSLLRTCLILQTITGIFLAMHYSPDISLAFSSVAHITRDVQYGWLIRNMHANGASLFFMCIYLHIGRGIY 90
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 91 YGSYLYKE--TWNTGTTLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYVGNTLVQWIWGGFSVDNATLTRFFTF 168
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 748365112 169 H-FLLPFTIMGLTVMHLLFLHETGSNNP 195
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
245-326 |
1.43e-09 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 56.34 E-value: 1.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQF-RPLTQILFwslIANLLVLT 323
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPVATAVF---LFGTLVTL 142
|
...
gi 748365112 324 WIG 326
Cdd:COG5679 143 WLG 145
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
245-326 |
1.59e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.34 E-value: 1.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQF-RPLTQILFwsLIANLLVLt 323
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVF--LFGTVVAL- 141
|
...
gi 748365112 324 WIG 326
Cdd:TIGR01156 142 WLG 144
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
245-326 |
6.55e-09 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 54.24 E-value: 6.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 748365112 245 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLMSILVLFLMPALHTSKQRTTQF-RPLTQILFwslIANLLVLT 323
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFrRPVATTVF---LIGTAVAL 141
|
...
gi 748365112 324 WIG 326
Cdd:CHL00058 142 WLG 144
|
|
|