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Conserved domains on  [gi|745999997|ref|YP_009114793|]
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NADH dehydrogenase subunit 5 (mitochondrion) [Eulemur rubriventer]

Protein Classification

NADH dehydrogenase subunit 5( domain architecture ID 11475900)

NADH dehydrogenase subunit 5 (ND5/NADH5) is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain; the immediate electron acceptor for the enzyme is believed to be ubiquinone

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-591 0e+00

NADH dehydrogenase subunit 5; Provisional


:

Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1130.34  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997   1 MNLLTSFTLVTLMILTMPVIMNIMNAYKDYPFA*HVKSS*IACAFTTSLIPTALFISSGQEAIIFHWHWMTLQTLKLSIS 80
Cdd:MTH00108   1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTT-ISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLS 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  81 FKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWY 160
Cdd:MTH00108  80 FKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWY 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 161 GRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFMLSYDPSMIPLIGLLLAATGKSAQFGLHPWLPSAMEG 240
Cdd:MTH00108 160 GRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEG 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 241 PTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGI 320
Cdd:MTH00108 240 PTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGI 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 321 NQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESA 400
Cdd:MTH00108 320 NQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAA 399
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 401 NTSNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNTPQ 480
Cdd:MTH00108 400 NTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQ 479
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 481 MTMPLHLKLMAMTVTIAGFALAMELNLMTKNLNLKLPSHLFKFSNSLGYYPTTTHRLIPSHNLNLSQNTASLLLDLIWLE 560
Cdd:MTH00108 480 MTMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLE 559
                        570       580       590
                 ....*....|....*....|....*....|.
gi 745999997 561 KAMPKNLSHLQMLSSTTISNQTGLIKFYFLS 591
Cdd:MTH00108 560 KILPKTISLIQMKASTTISNQKGLIKLYFLS 590
 
Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-591 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1130.34  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997   1 MNLLTSFTLVTLMILTMPVIMNIMNAYKDYPFA*HVKSS*IACAFTTSLIPTALFISSGQEAIIFHWHWMTLQTLKLSIS 80
Cdd:MTH00108   1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTT-ISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLS 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  81 FKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWY 160
Cdd:MTH00108  80 FKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWY 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 161 GRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFMLSYDPSMIPLIGLLLAATGKSAQFGLHPWLPSAMEG 240
Cdd:MTH00108 160 GRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEG 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 241 PTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGI 320
Cdd:MTH00108 240 PTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGI 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 321 NQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESA 400
Cdd:MTH00108 320 NQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAA 399
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 401 NTSNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNTPQ 480
Cdd:MTH00108 400 NTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQ 479
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 481 MTMPLHLKLMAMTVTIAGFALAMELNLMTKNLNLKLPSHLFKFSNSLGYYPTTTHRLIPSHNLNLSQNTASLLLDLIWLE 560
Cdd:MTH00108 480 MTMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLE 559
                        570       580       590
                 ....*....|....*....|....*....|.
gi 745999997 561 KAMPKNLSHLQMLSSTTISNQTGLIKFYFLS 591
Cdd:MTH00108 560 KILPKTISLIQMKASTTISNQKGLIKLYFLS 590
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
42-502 1.85e-148

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 441.51  E-value: 1.85e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  42 ACAFTTSLIPTALFISS--------GQEAIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDP 113
Cdd:COG1009   29 AAGWLAALAPLAAFVLSlllfpavlGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDP 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 114 NIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMY 193
Cdd:COG1009  109 GLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAI 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 194 SNTWEFQQMF---MLSYDPSMIPLIGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLM 268
Cdd:COG1009  189 AGTLNFSELLaaaPTILSSPLLTLILLLLllGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLF 268
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 269 ENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSII 348
Cdd:COG1009  269 ALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVI 348
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 349 HNLNdEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATS-MTAIYSTRI 427
Cdd:COG1009  349 HATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAfLTAFYSFRL 427
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 428 IFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGF--------FLTNNILPMNTPQMTMPLHLKLMAMTVTIAGF 499
Cdd:COG1009  428 FFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLllpgllegLLAPAAVLGGELHLAHGLLLNALPLLLSLLGI 507

                 ...
gi 745999997 500 ALA 502
Cdd:COG1009  508 ALG 510
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
36-502 3.67e-134

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 405.13  E-value: 3.67e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997   36 VKSS*IACAFTTSLIPTALFISSGQEAIIFH--WHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDP 113
Cdd:TIGR01974  32 IGIGSVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDE 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  114 NIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMY 193
Cdd:TIGR01974 112 GYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWY 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  194 SNTWEFQQMFMLS--YDPSMIPLIGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLME 269
Cdd:TIGR01974 192 FGTLNFQEVFALApgAFFSALTLICLLLfiGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFE 271
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  270 NNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIH 349
Cdd:TIGR01974 272 LSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIH 351
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  350 NLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATSMTAIYSTRIIF 429
Cdd:TIGR01974 352 AMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIF 431
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  430 YALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNI------LPMNTPQMT----MPLHLKLMAMTVTIAGF 499
Cdd:TIGR01974 432 MVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFeflkgvLPTSAEPALehhhVPALEIWSPTAVAILGI 511

                  ...
gi 745999997  500 ALA 502
Cdd:TIGR01974 512 LLA 514
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
135-400 9.81e-56

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 190.22  E-value: 9.81e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  135 ANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQM-----FMLSYDP 209
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  210 SMIPLIGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFHPLMEN-NKSIQTLMLCLGAITTL 287
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  288 FTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPY---LAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLF 364
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 745999997  365 KSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESA 400
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
 
Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-591 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1130.34  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997   1 MNLLTSFTLVTLMILTMPVIMNIMNAYKDYPFA*HVKSS*IACAFTTSLIPTALFISSGQEAIIFHWHWMTLQTLKLSIS 80
Cdd:MTH00108   1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTT-ISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLS 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  81 FKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWY 160
Cdd:MTH00108  80 FKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWY 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 161 GRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFMLSYDPSMIPLIGLLLAATGKSAQFGLHPWLPSAMEG 240
Cdd:MTH00108 160 GRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEG 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 241 PTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGI 320
Cdd:MTH00108 240 PTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGI 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 321 NQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESA 400
Cdd:MTH00108 320 NQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAA 399
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 401 NTSNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNTPQ 480
Cdd:MTH00108 400 NTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQ 479
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 481 MTMPLHLKLMAMTVTIAGFALAMELNLMTKNLNLKLPSHLFKFSNSLGYYPTTTHRLIPSHNLNLSQNTASLLLDLIWLE 560
Cdd:MTH00108 480 MTMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLE 559
                        570       580       590
                 ....*....|....*....|....*....|.
gi 745999997 561 KAMPKNLSHLQMLSSTTISNQTGLIKFYFLS 591
Cdd:MTH00108 560 KILPKTISLIQMKASTTISNQKGLIKLYFLS 590
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
3-588 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 934.63  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997   3 LLTSFTLVTLMILTMPVIMNIMNAYKDYPFA*-HVKSS*IACAFTTSLIPTALFISSGQEAIIFHWHWMTLQTLKLSISF 81
Cdd:MTH00137   6 IMTSSLILIFALLIYPLLTTLSPNPQKPNWALtHVKTA-VKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISF 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  82 KLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYG 161
Cdd:MTH00137  85 KFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYG 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 162 RTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFMLSYDPSM-IPLIGLLLAATGKSAQFGLHPWLPSAMEG 240
Cdd:MTH00137 165 RADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALSKDFDLtLPLLGLILAATGKSAQFGLHPWLPSAMEG 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 241 PTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGI 320
Cdd:MTH00137 245 PTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGL 324
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 321 NQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESA 400
Cdd:MTH00137 325 NQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEAL 404
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 401 NTSNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNTPQ 480
Cdd:MTH00137 405 NTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPV 484
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 481 MTMPLHLKLMAMTVTIAGFALAMEL-NLMTKNLNLKLPSHLFKFSNSLGYYPTTTHRLIPSHNLNLSQNTASLLLDLIWL 559
Cdd:MTH00137 485 MTMPPLLKLAALIVTILGLLIALELaSLTNKQFKPTPTLPPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWL 564
                        570       580       590
                 ....*....|....*....|....*....|
gi 745999997 560 EKAMPKNLSHLQMLSSTTISN-QTGLIKFY 588
Cdd:MTH00137 565 EKTGPKGIASLQLPLITTTSNiQQGMIKTY 594
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
3-591 0e+00

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 879.11  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997   3 LLTSFTLVTLMILTMPVIMNIMNAyKDYPFA*HVKSS*IACAFTTSLIPTALFISSGQEAIIFHWHWMTLQTLKLSISFK 82
Cdd:MTH00004   4 LLNTTTLLTLLILLTPILLPLLSK-NLKNSPTTIKTT-VKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFK 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  83 LDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGR 162
Cdd:MTH00004  82 LDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGR 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 163 TDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFMlSYDPSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPT 242
Cdd:MTH00004 162 AEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFS-PTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPT 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 243 PVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQ 322
Cdd:MTH00004 241 PVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQ 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 323 PYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANT 402
Cdd:MTH00004 321 PQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNT 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 403 SNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNTPQMT 482
Cdd:MTH00004 401 SYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMT 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 483 MPLHLKLMAMTVTIAGFALAMELNLMTKNLNLKLPSHLFKFSNSLGYYPTTTHRLIPSHNLNLSQNTASLLLDLIWLEKA 562
Cdd:MTH00004 481 MPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKM 560
                        570       580       590
                 ....*....|....*....|....*....|
gi 745999997 563 MPKNLSHLQMLSSTTISN-QTGLIKFYFLS 591
Cdd:MTH00004 561 GPKGLANLQLTASKTLTTlQKGLIKNYLTS 590
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
1-590 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 853.82  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997   1 MNLL---TSFTLVTLMILTMPVIMNIMNaykdyPFA*HVKSS*IACAFTTSLIPTALFISSGQEAIIFHWHWMTLQTLKL 77
Cdd:MTH00066   1 MNLMlifNSSMILSLLLLILPLLLPKSN-----NFHTNVKTS-VKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNI 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  78 SISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIS 157
Cdd:MTH00066  75 NSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIG 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 158 WWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFMLsYDPSMIPLIGLLLAATGKSAQFGLHPWLPSA 237
Cdd:MTH00066 155 WWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLL-NDNSTLPLLGLILAAAGKSAQFGLHPWLPAA 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 238 MEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVT 317
Cdd:MTH00066 234 MEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVT 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 318 MGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLII 397
Cdd:MTH00066 314 IGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAII 393
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 398 ESANTSNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMN 477
Cdd:MTH00066 394 EAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMK 473
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 478 TPQMTMPLHLKLMAMTVTIAGFALAMELNLMTKNLNLKLPSHlfKFSNSLGYYPTTTHRLIPSHNLNLSQNTASLLLDLI 557
Cdd:MTH00066 474 PQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMH--SFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMT 551
                        570       580       590
                 ....*....|....*....|....*....|....
gi 745999997 558 WLEKAMPKNLSHLQMLSSTTISN-QTGLIKFYFL 590
Cdd:MTH00066 552 WYEKSGPKGLTNQQLPPIKTITNiQTGLIKTYLT 585
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
1-589 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 684.37  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997   1 MNLLTSFTLVTLMILTMPVIMNIMNAYKDYPFA*hvkss*IACAFTTSLIPTALFISSGQEAIIFHWHWMTLQTLKLSIS 80
Cdd:MTH00211   2 NTIFNSGFLLILILLLLPLLLPLNNSKLHIKKA-------VKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLS 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  81 FKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWY 160
Cdd:MTH00211  75 FKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWY 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 161 GRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFMLSyDPSMIPLIGLLLAATGKSAQFGLHPWLPSAMEG 240
Cdd:MTH00211 155 GRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILN-LDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEG 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 241 PTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGI 320
Cdd:MTH00211 234 PTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGL 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 321 NQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESA 400
Cdd:MTH00211 314 NQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESM 393
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 401 NTSNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNTPQ 480
Cdd:MTH00211 394 NGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEI 473
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 481 MTMPLHLKLMAMTVTIAGFALAMELnlmTKNLNLKLPSHLFKFSNSLGYYPTTTHRLIPSHNLNLSQNTASLLLDLIWLE 560
Cdd:MTH00211 474 LSLPFLLKLMPLLVTIVGLLLGLEL---VNLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYE 550
                        570       580       590
                 ....*....|....*....|....*....|
gi 745999997 561 KAMPKNLSHLQMLSSTTISN-QTGLIKFYF 589
Cdd:MTH00211 551 KLGPKGLGVNQKKLIKLVTSpQQGLIKSYL 580
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
48-591 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 556.51  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  48 SLIPTALFISSGQEAIIFHW-HWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFL 126
Cdd:MTH00208  69 SLINLLIWILLGCPNINISLsNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFL 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 127 ITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFMLS 206
Cdd:MTH00208 149 LNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLN 228
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 207 YDPSM---IPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGA 283
Cdd:MTH00208 229 NSNSFlinILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGS 308
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 284 ITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGL 363
Cdd:MTH00208 309 LTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGL 388
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 364 FKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTSTP 443
Cdd:MTH00208 389 SFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSP 468
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 444 INENNPLLINSIKRLTLGSIFAGFFLTNNILpmNTPQMTMPLHLKLMAMTVTIAGFALAMELnLMTKNLNLKLPSHLFKF 523
Cdd:MTH00208 469 ISEENPNLTNPLLRLAIGTIISGWFFSNFVF--NLPPLTLPLILKSLPLIVTIIGAAFSFSF-LLSLSSNPINSNFFSFL 545
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 745999997 524 SNSLgYYPTTTHRLIPSHNLNLSQNTASLLLDLIWLEKAMPKNLSHLQMLSSTTISN-QTGLIKFYFLS 591
Cdd:MTH00208 546 SNQW-FFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLtQTGYIKQYLLS 613
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
42-502 1.85e-148

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 441.51  E-value: 1.85e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  42 ACAFTTSLIPTALFISS--------GQEAIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDP 113
Cdd:COG1009   29 AAGWLAALAPLAAFVLSlllfpavlGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDP 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 114 NIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMY 193
Cdd:COG1009  109 GLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAI 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 194 SNTWEFQQMF---MLSYDPSMIPLIGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLM 268
Cdd:COG1009  189 AGTLNFSELLaaaPTILSSPLLTLILLLLllGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLF 268
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 269 ENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSII 348
Cdd:COG1009  269 ALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVI 348
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 349 HNLNdEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATS-MTAIYSTRI 427
Cdd:COG1009  349 HATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAfLTAFYSFRL 427
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 428 IFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGF--------FLTNNILPMNTPQMTMPLHLKLMAMTVTIAGF 499
Cdd:COG1009  428 FFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLllpgllegLLAPAAVLGGELHLAHGLLLNALPLLLSLLGI 507

                 ...
gi 745999997 500 ALA 502
Cdd:COG1009  508 ALG 510
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
38-502 4.71e-145

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 433.43  E-value: 4.71e-145
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  38 SS*IACAFTTSLIPTALFISSGQEAIIFH-WHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNID 116
Cdd:PRK06590  36 TGLVGLSALLSLVVFFDFLLGGGRAFSQTlWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYR 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 117 QFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMawFLMYSN- 195
Cdd:PRK06590 116 RFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGI--FLLFAEf 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 196 -TWEFQQMF-----MLSYDPSMIPLIGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPL 267
Cdd:PRK06590 194 gSLNYDEVFaaapqFFGLGWSALTLICLLLfiGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPL 273
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 268 MENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSI 347
Cdd:PRK06590 274 FELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSV 353
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 348 IHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESAnTSNINAWALTITLIATSMTAIYSTRI 427
Cdd:PRK06590 354 IHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAA-FANGHINLFVAGLVGAFLTAFYSFRL 432
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 428 IFYALLGQPRFTTS----TPINENNPLLInsikrLTLGSIFAGFFLTN---NILPMNT------PQMTMPLHLKLMAMTV 494
Cdd:PRK06590 433 IFLVFHGKEKEKIHhpheSPAVMTLPLIV-----LAVLSVFAGALIVPpflGVLPLTTelahgeAEHHLPVWVALLPLVV 507

                 ....*...
gi 745999997 495 TIAGFALA 502
Cdd:PRK06590 508 ALAGIALA 515
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
36-502 3.67e-134

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 405.13  E-value: 3.67e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997   36 VKSS*IACAFTTSLIPTALFISSGQEAIIFH--WHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDP 113
Cdd:TIGR01974  32 IGIGSVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDE 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  114 NIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMY 193
Cdd:TIGR01974 112 GYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWY 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  194 SNTWEFQQMFMLS--YDPSMIPLIGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLME 269
Cdd:TIGR01974 192 FGTLNFQEVFALApgAFFSALTLICLLLfiGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFE 271
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  270 NNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIH 349
Cdd:TIGR01974 272 LSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIH 351
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  350 NLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATSMTAIYSTRIIF 429
Cdd:TIGR01974 352 AMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIF 431
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  430 YALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNI------LPMNTPQMT----MPLHLKLMAMTVTIAGF 499
Cdd:TIGR01974 432 MVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFeflkgvLPTSAEPALehhhVPALEIWSPTAVAILGI 511

                  ...
gi 745999997  500 ALA 502
Cdd:TIGR01974 512 LLA 514
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
67-505 2.81e-119

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 366.71  E-value: 2.81e-119
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  67 WHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWE 146
Cdd:MTH00020  62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 147 GVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMF-MLSYDPS---MIPLIGLLLAAT 222
Cdd:MTH00020 142 GVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFnMVVSAPSsdiTLICLFLFIGAV 221
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 223 GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKI 302
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKV 301
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 303 VAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALT 382
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 383 GMPFLTGFYSKDLIIESANTSNINAWALTITLIATSMTAIYSTRIIFYALLGQP--RFTTSTPINENNPLLINSIKRLTL 460
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTnlKKAVFFHLHEGDWNLLLPLGILAL 461
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 745999997 461 GSIFAGFFLTNNI--LPMNTPQMtMPLHLKLMAMTVTIAGFALAMEL 505
Cdd:MTH00020 462 GSIFVGYLAKEMIwsFQITLPPI-VPLSIKLLPVFLSLGGIGLVIIL 507
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
45-591 5.11e-115

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 354.15  E-value: 5.11e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  45 FTTSLIPTALFISSGQEAIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLL 124
Cdd:MTH00151  14 YSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVML 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 125 FLITMLILVTANNLFQLFIGWEGVGIMSFLLISWwYGRTDANTAALQAVLYNRIGDiGFILTMAWFLMYSNTWEFqqMFM 204
Cdd:MTH00151  94 FVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIY-YQNKKSLSAGMLTALTNRIGD-VLILLSIALLVLLGHWSI--LSM 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 205 LSYDPSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAI 284
Cdd:MTH00151 170 WDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLL 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 285 TTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLF 364
Cdd:MTH00151 250 TLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLF 329
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 365 KSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTSTPI 444
Cdd:MTH00151 330 LSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSK 409
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 445 NENNPLLINSIKRLTLGSIFAGFFLTNNILPMNTPqMTMPLHLKLMAMTVTIAGFALAMeLNLMTKNLNLKLPSHLFKFS 524
Cdd:MTH00151 410 SDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEE-FFLPSYLKLLIGFVILLGLFLSF-GFWDSGFSSSKMVKLSFFFS 487
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 745999997 525 NSLGYYPTTTHRLIPShnLNLSQNTASLLLDLIWLEKAMP-----KNLSHLQMLSSTTISNQTGLIKFYFLS 591
Cdd:MTH00151 488 SMWFLSPLSSQPLKSL--SLKLSNSSMKSLDMGWLEILGGqgvfkANKSFSVLNESWPVKWFNFFIGLILLL 557
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
45-591 9.87e-114

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 350.98  E-value: 9.87e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  45 FTTSLIPTALFISSGQEAIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLL 124
Cdd:MTH00165  14 LSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 125 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIsWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYsNTWEFQQM-- 202
Cdd:MTH00165  94 FVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNF-GSWNFIFYld 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 203 FMLSYDPSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLcLG 282
Cdd:MTH00165 172 FMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFFSKFLLL-IS 250
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 283 AITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGG 362
Cdd:MTH00165 251 LLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGG 330
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 363 LFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTST 442
Cdd:MTH00165 331 LSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLN 410
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 443 PINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNtPQMTMPLHLKLMAMTVTIAGFALAMELNLMTKNLNLKLPSHLFK 522
Cdd:MTH00165 411 NLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEP-YMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKNYKL 489
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 745999997 523 --FSNSLGYYPTTTHRLIPSHNLNLSQNTaSLLLDLIWLEKAMPKNLSHLQMLSSTTISN-QTGLIKFYFLS 591
Cdd:MTH00165 490 ssFLGSMWFMPFLSTYGISYYPLNLGSLS-LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWlQNNNLKIYLLS 560
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
38-502 9.94e-114

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 352.39  E-value: 9.94e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  38 SS*IACAFTTSLIPTALFISSGQEAIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQ 117
Cdd:MTH00210  33 SSCIVISAIVSCCIFYETTLNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPR 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 118 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTW 197
Cdd:MTH00210 113 FMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTL 192
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 198 EFQQMFML---SYDPSMIPLIGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNK 272
Cdd:MTH00210 193 EFSTISSLlvtNINKESLTIICLLLfiGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSP 272
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 273 SIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLN 352
Cdd:MTH00210 273 LALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVS 352
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 353 DEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATSMTAIYSTRIIFYAL 432
Cdd:MTH00210 353 DEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTF 432
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 433 LGQPRFTTSTPIN--ENN-----PLLInsikrLTLGSIFAG-----FFLTNNILPMntpqmtMPLHLKLMAMTVTIAGFA 500
Cdd:MTH00210 433 ITNTNSKKEVFIGvhESSwnitfPLLL-----LAFGSIFVGylgkeVVLSNVIPPI------VPNSIKMIPLLFSLLGAL 501

                 ..
gi 745999997 501 LA 502
Cdd:MTH00210 502 LA 503
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
54-561 5.17e-97

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 307.34  E-value: 5.17e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  54 LFISSGQEAIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILV 133
Cdd:MTH00209  21 VIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLI 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 134 TANNLFQLFIGWEGVGIMSFLLISWwYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNtWefqQMFMLSYDPSMIP 213
Cdd:MTH00209 101 FVPNLITLLLGWDGLGLVSYLLVIY-YQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGN-W---NIFYLNFNSNLGS 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 214 LIGLL--LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAI 291
Cdd:MTH00209 176 VISVLivLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASM 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 292 CALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTS 371
Cdd:MTH00209 256 SANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITS 335
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 372 SSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTSTPINENNPLL 451
Cdd:MTH00209 336 ICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLN 415
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 452 INSIKRLTLGSIFAGFFLTNNILPmNTPQMTMPLHLKLMAMTVTIAGFALAmeLNLMTKNLNLKLPSHLFKFSNSLGYYP 531
Cdd:MTH00209 416 LKPMLVLTLGSITGGSVMSWVMVP-SVNSVVLPWFLKLLPIMLILFGVLLM--YMVLKKNFFLIKGYKVNYFLSQMWFLP 492
                        490       500       510
                 ....*....|....*....|....*....|
gi 745999997 532 TTTHRLIPSHNLNLSQNTASlLLDLIWLEK 561
Cdd:MTH00209 493 DLSSQPVNKFTMKLSKTMLK-LLDQGWVEK 521
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
41-437 8.47e-93

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 299.63  E-value: 8.47e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  41 IACAFTTSLIPTALFIS--------SGQEAIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSD 112
Cdd:PRK07376  39 PVAVLLISLVGAAAVLSyallwsqiQGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHD 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 113 PNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLM 192
Cdd:PRK07376 119 PGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFW 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 193 YSNTWEFQQMF----------MLSydPSMIPLIGLL--LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFL 260
Cdd:PRK07376 199 ATGSFDFDGIAdrlselvssgAVS--GWLALLLCILvfLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFL 276
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 261 LIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAML 340
Cdd:PRK07376 277 VARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAML 356
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 341 FMCSGSIIHNLND--------EQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWAltI 412
Cdd:PRK07376 357 FLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWF--V 434
                        410       420
                 ....*....|....*....|....*
gi 745999997 413 TLIATSMTAIYSTRIIFYALLGQPR 437
Cdd:PRK07376 435 GFLTAGMTAFYMFRMYFLTFEGEFR 459
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
31-560 1.19e-92

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 296.29  E-value: 1.19e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  31 PFA*HVKSS*IACAFTTSLIPTALFISSGQEAIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMH 110
Cdd:MTH00207   3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 111 SDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWwYGRTDANTAALQAVLYNRIGDIGFILTMAWF 190
Cdd:MTH00207  83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIY-YQNPKSLGAGMITALTNRIGDVMLLLSIGWT 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 191 LmysNTWEFQQMFMLSYDPSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMEN 270
Cdd:MTH00207 162 L---NQGHWSITNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSS 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 271 NKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHN 350
Cdd:MTH00207 239 TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHS 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 351 LNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATSMTAIYSTRIIFY 430
Cdd:MTH00207 319 HHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 431 ALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPMNTPqMTMPLHLKLMAMTVTIAGFALAMELNLM-T 509
Cdd:MTH00207 399 VLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEE-PILPLQYKLLPLLVVTLGALLAWLFTTPnI 477
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|...
gi 745999997 510 KNLNLKLPSHLFKFSNSLGYY--PTTTHRLIpSHNLNLSQNTASlLLDLIWLE 560
Cdd:MTH00207 478 TKTPLLINNPLSHFASCLMWFlvPLSSQFIM-STPMNLSHNYLK-LLDQGWLE 528
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
67-590 1.91e-91

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 296.10  E-value: 1.91e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  67 WHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWE 146
Cdd:MTH00032  62 YKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWE 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 147 GVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQM-------------------FMLSY 207
Cdd:MTH00032 142 GVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgsgimdrgyygggaYESPL 221
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 208 DPSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTL 287
Cdd:MTH00032 222 APFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAF 301
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 288 FTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPY-LAFLHICNHAFFKAMLFMCSGSIIHNLN-DEQDIRKMGGLFK 365
Cdd:MTH00032 302 FAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIH 381
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 366 SMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIE------------------------------------SANTSNINAWA 409
Cdd:MTH00032 382 SIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGSAFA 461
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 410 LTITLIATSMTAIYSTRIIFYALLGQPRFTT----STPINENNPLLINSIKRLTLGSIFAGfFLTNNILPMNTPQMTMPL 485
Cdd:MTH00032 462 FWLGTVAALLTAFYSIRLVYITFIISPNSPKesliSSHINIVDKRVLTVLSLLCFGAIFVG-YLIQDILIGDIEHPIVPP 540
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 486 HLKLMAMTVTIAGFALAMELNLMTKNLNLKL------PSHLFKFSNSLG---YYPTTTHRLIPSHNLNLSQNTASLLLDL 556
Cdd:MTH00032 541 LIKVMPTLMGLFGMGLCLWAQKGTREGELYWgfdpigPSFLLSIYSFLGgawQGDHLINKLVAIPLFSFGHWGIYKTLDR 620
                        570       580       590
                 ....*....|....*....|....*....|....*
gi 745999997 557 IWLEKAMPKNLSHLQMLSSTTISN-QTGLIKFYFL 590
Cdd:MTH00032 621 GWLELFGPQGISTIALRVSQFISNlQSGVISRYAL 655
ndhF CHL00025
NADH dehydrogenase subunit 5
67-429 5.18e-69

NADH dehydrogenase subunit 5


Pssm-ID: 214338 [Multi-domain]  Cd Length: 741  Bit Score: 237.48  E-value: 5.18e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  67 WHWMTLQTLKLSISFKLD----YFSMLFVPVALFVtwsiMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLF 142
Cdd:CHL00025  73 WSWTINNDFSLEFGYLIDpltsIMLILITTVGILV----LIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIY 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 143 IGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFM-----LSYDPSMIPL--- 214
Cdd:CHL00025 149 IFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEifnnlIYNNEVNLLFatl 228
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 215 --IGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAIC 292
Cdd:CHL00025 229 caFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATL 308
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 293 ALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLF 364
Cdd:CHL00025 309 ALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLR 388
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 745999997 365 KSMPFTSSSLTIGSLALTGMPFLTGFYSKDLII-ESANTSNINAWaltITLIATSMTAIYSTRIIF 429
Cdd:CHL00025 389 KYMPITKTTFLLGTLSLCGIPPLACFWSKDEILnDSWLYSPIFAI---IAWSTAGLTAFYMFRIYL 451
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
48-468 3.04e-66

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 230.58  E-value: 3.04e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  48 SLIPTALF---------ISSGqEAIIFHWHWMTlqTLKLSISFKLDYFSMLFvpvALFVT---WSIMEFSMWYMHSDPNI 115
Cdd:PRK12647  21 ALLPLALFlyflsfipeIAAG-ETVRGGYAWVP--SLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKGHPDL 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 116 DQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGdiGFILTMAWFLMY-- 193
Cdd:PRK12647  95 GRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGG--GLALLAGLILLGnv 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 194 SNTWEFQQMF----MLSYDPSMIP-LIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLM 268
Cdd:PRK12647 173 TGTYSLSELLasgdVIREHPLYLAiLLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVL 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 269 ENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYL---AFLHICNHAFFKAMLFMCSG 345
Cdd:PRK12647 253 GGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAG 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 346 SIIHNLNdEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIATSMTAIYST 425
Cdd:PRK12647 333 IIDHETG-TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVLGNALMVAVA 411
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 745999997 426 RIIFYA-LLGQPRFTTSTPINENNPLLINSIKRLTLG---SIFAGFF 468
Cdd:PRK12647 412 FLVGIKpFLGKLVETPKHPHEAPVLMWLGPAVLAVLGllfGLFPFFF 458
PRK12648 PRK12648
putative monovalent cation/H+ antiporter subunit A; Reviewed
39-437 1.55e-62

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237157 [Multi-domain]  Cd Length: 948  Bit Score: 222.76  E-value: 1.55e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  39 S*IACAFTTSLIPTalfISSGqEAIIFHWHWmtLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQF 118
Cdd:PRK12648  36 ALAALVLLALLYPA---VAAG-EVIRAEIEW--LPALGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRF 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 119 FKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGdiGFILtMAWFLMYSNTwe 198
Cdd:PRK12648 110 FSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAG--GLAL-LAGVLLLGHI-- 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 199 fqqmfMLSYD-----------------PSMIPLIglLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLL 261
Cdd:PRK12648 185 -----VGSYDldvvlaagdlirahplyPPALVLI--LLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLL 257
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 262 IRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPY---LAFLHICNHAFFKA 338
Cdd:PRK12648 258 ARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKA 337
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 339 MLFMCSGSIIHnlndE---QDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLII-ESANTSNINAWALTITL 414
Cdd:PRK12648 338 SLFMAAGIIDH----EtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPV 413
                        410       420
                 ....*....|....*....|....*.
gi 745999997 415 IAT---SMTAIYSTRIIFYALLGQPR 437
Cdd:PRK12648 414 AATlagAFSVAYSLRFIHDVFFGPPP 439
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
77-431 2.01e-61

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 209.62  E-value: 2.01e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  77 LSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 156
Cdd:COG0651   68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 157 SwWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQM-FMLSYDPSMIPLIGLLLAATG---KSAQFGLHP 232
Cdd:COG0651  148 A-LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaARLAELDPGLLLAAFALLLVGfgiKAALFPLHF 226
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 233 WLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFHPLM---ENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTS 308
Cdd:COG0651  227 WLPDAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 309 SQLGLMMVTMGINQPYL---AFLHICNHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMP 385
Cdd:COG0651  306 SQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLP 384
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 745999997 386 FLTGFYSKDLIIESANTSniNAWALTITLIATS-MTAIYSTRIIFYA 431
Cdd:COG0651  385 PLSGFVSKWLLLQAALEA--GAWLLAAVLLLSSlLTLAYFVRIFGRA 429
PRK12650 PRK12650
DUF4040 family protein;
77-437 4.81e-60

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 215.68  E-value: 4.81e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  77 LSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 156
Cdd:PRK12650  71 VNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLI 150
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 157 SwwYGRTDANTAALQAVLYNRIGdiGFILTMAWFLMYSNTWEFQQMFML-----SYDPSMIPLIGLLLA--ATGKSAQFG 229
Cdd:PRK12650 151 A--RSGSGGEAGSIRTLILTFFG--GLTLLAAVAIAATQTGTTSLSGILhsdvwAEKPGLTTVVAVLIAvaAFTKSAQFP 226
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 230 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSS 309
Cdd:PRK12650 227 FHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVS 306
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 310 QLGLMMVTMGINQPY---LAFLHICNHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPF 386
Cdd:PRK12650 307 QLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 745999997 387 LTGFYSKDLIIESANTSNINAWALTITLIATSMTAI----YSTRIIFYALLGQPR 437
Cdd:PRK12650 386 LFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAFVDGPR 440
PRK12646 PRK12646
DUF4040 family protein;
65-432 2.62e-59

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 211.92  E-value: 2.62e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  65 FHWHWMTlqTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYM-HSDPNIDQFFKYLLLFLITMLILVTANNLFQLFI 143
Cdd:PRK12646  60 TSIPWMK--TLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYV 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 144 GWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGD----IGFIltMAWFLMYSNTWE--FQQMFMLSYDPSMIPLI-G 216
Cdd:PRK12646 138 FWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFI--MLYIMTGTNNITeiLGQADHIKNHGLFIPMIfM 215
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 217 LLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQ 296
Cdd:PRK12646 216 FLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQ 295
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 297 NDIKKIVAFSTSSQLGLMMVTMGINQPYL-----------------AFLHICNHAFFKAMLFMCSGSIIHNlNDEQDIRK 359
Cdd:PRK12646 296 WDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRI 374
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 745999997 360 MGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIES-ANTSNINAWALTITLIATSMTAIYSTRIIFYAL 432
Cdd:PRK12646 375 LSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDAlTQTGQLSQFSLISMIIIVFIGVIASIFTFTYAL 448
2a6301s01 TIGR00940
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ...
45-437 6.04e-57

Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273353 [Multi-domain]  Cd Length: 793  Bit Score: 205.08  E-value: 6.04e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997   45 FTTSLIPTalfISSGQeAIIFHWHWMTlqTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLL 124
Cdd:TIGR00940  41 YTLGLYPY---TASGG-VLHYTIDWVP--ELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLA 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  125 FLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGdiGFILTMAWFLMYSNTWEFQQMFM 204
Cdd:TIGR00940 115 FMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFG--GLAMLGGLILLGKITGSFSIDAV 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  205 LSY------DPSMIP-LIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTL 277
Cdd:TIGR00940 193 IASadairnSPLFGTaMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWI 272
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  278 MLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYL----------------AFLHICNHAFFKAMLF 341
Cdd:TIGR00940 273 VGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLF 352
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  342 MCSGSIIHNlNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTS------NINAWALT---I 412
Cdd:TIGR00940 353 MAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAhlvnpfDTVTLGYLfpyV 431
                         410       420
                  ....*....|....*....|....*
gi 745999997  413 TLIATSMTAIYSTRIIFYALLGQPR 437
Cdd:TIGR00940 432 ATVASVFTFVYSLRFIHGVFFGRPK 456
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
135-400 9.81e-56

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 190.22  E-value: 9.81e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  135 ANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQM-----FMLSYDP 209
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  210 SMIPLIGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFHPLMEN-NKSIQTLMLCLGAITTL 287
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  288 FTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPY---LAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLF 364
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 745999997  365 KSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESA 400
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
ND5 MTH00095
NADH dehydrogenase subunit 5; Provisional
77-434 1.36e-54

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177158 [Multi-domain]  Cd Length: 527  Bit Score: 193.98  E-value: 1.36e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  77 LSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 156
Cdd:MTH00095  37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 157 sWWYGRTDANTAALQAVLYNRIGDIgFILTMAWFLMYSNTWEFQQMFMLSYdpsmiPLIGLLLAATGKSAQFGLHPWLPS 236
Cdd:MTH00095 117 -LFYNNWDSNSGAMNTALTNRIGDF-FIFLFFSGFIFSSYYFFSFSFFSSS-----MILMLLLTSFTKSAQFPFSSWLPK 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 237 AMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMeNNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMV 316
Cdd:MTH00095 190 AMSAPTPVSSLVHSSTLVTAGLILLMNFSYLI-LNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSML 268
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 317 TMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLI 396
Cdd:MTH00095 269 TFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELI 348
                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 745999997 397 IESANTSNINAWALTITLIATSMTAIYSTRIIFYALLG 434
Cdd:MTH00095 349 LELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
PRK12645 PRK12645
monovalent cation/H+ antiporter subunit A; Reviewed
49-437 4.29e-53

monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237155 [Multi-domain]  Cd Length: 800  Bit Score: 194.37  E-value: 4.29e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  49 LIPTALFI--------SSGQEAIIFHWHWMTlqTLKLSISFKLDYFSMLFvpvALFVTWS---IMEFSMWYMHSDP-NID 116
Cdd:PRK12645  36 PVPVVLFIyflsliptTMSGNTVMKTLPWIP--SLGINFTLYVDGLSLLF---ALLITGIgslVVLYSIYYLSKKKeQLG 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 117 QFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDI----GFILtmawFLM 192
Cdd:PRK12645 111 NFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLsmlgGFIL----LYI 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 193 YSNTWEFQQMF----MLSYDPSMIP-LIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPL 267
Cdd:PRK12645 187 MTGSFSIREMIanadEIQNSPLFIPaMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPI 266
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 268 M-ENNKSIQTLMLcLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGI-----------NQPYL-----AFLHI 330
Cdd:PRK12645 267 FaGSQVWFWTVTL-VGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIgaaslhyqgddSKIYAaaitaAIFHL 345
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 331 CNHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIES------ANTSN 404
Cdd:PRK12645 346 INHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmlnateANLFS 424
                        410       420       430
                 ....*....|....*....|....*....|....*.
gi 745999997 405 INAWALTITLIA---TSMTAIYSTRIIFYALLGQPR 437
Cdd:PRK12645 425 LDTWGVLFPVIAwvaSVFTFVYSIIFIFKTFFGKYK 460
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
61-468 5.29e-53

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 195.53  E-value: 5.29e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  61 EAIIFHWHWMtlQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSD-PNIDQFFKYLLLFLITMLILVTANNLF 139
Cdd:PRK12644  52 GAPTEVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLL 129
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 140 QLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDigfiLTM-AWFLMYSN---TWEFQQmfmLSYDPSMIPLI 215
Cdd:PRK12644 130 LLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGG----LAMlVGIIILGQaagTYRLSE---LLADPPTGPAV 202
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 216 G-----LLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTA 290
Cdd:PRK12644 203 SvavvlILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGG 282
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 291 ICALTQNDIKKIVAFSTSSQLGLMMVTMGINQP--YLAFLH-ICNHAFFKAMLFMCSGSIIHNlNDEQDIRKMGGLFKSM 367
Cdd:PRK12644 283 WRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaALAGLAmLLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQ 361
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 368 PFTSSSLTIGSLALTGMPFLTGFYSKDLIIES----ANTSNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTSTP 443
Cdd:PRK12644 362 PVLAVVAALAAASMAGLPPLLGFVAKEAALEAvlhdGALGPAGPVVLAGIVLGSILTVAYSLRFLWGAFARKPGAFPSVA 441
                        410       420
                 ....*....|....*....|....*...
gi 745999997 444 INENN---PLLINSIKRLTLGSIFAGFF 468
Cdd:PRK12644 442 VTEMHrpsPLFLAPPAVLAVLGLVLGLL 469
PRK07390 PRK07390
NAD(P)H-quinone oxidoreductase subunit F; Validated
43-436 1.31e-52

NAD(P)H-quinone oxidoreductase subunit F; Validated


Pssm-ID: 236008 [Multi-domain]  Cd Length: 613  Bit Score: 190.12  E-value: 1.31e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  43 CAFTTSLIptALFISSGQEAIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYL 122
Cdd:PRK07390  49 LAFVHSLL--ALRAIWNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALL 126
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 123 LLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQM 202
Cdd:PRK07390 127 GFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDL 206
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 203 FM----LSYDPSMIPLIGLLLAA--TGKSAQFGLHPWLPSAMEGPTPVSaLLHSSTMVVAGIFLLIRFHPLMENNKSIQT 276
Cdd:PRK07390 207 AAwaatANLDPLTATLLGLALIAgpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSPVALT 285
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 277 LMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDeQD 356
Cdd:PRK07390 286 VLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTIT-QD 364
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 357 IRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSkdLIIESANTSNINAWALTITLIATSMTAIYSTRIIFYALLGQP 436
Cdd:PRK07390 365 LTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA--LLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLGKP 442
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
72-400 6.16e-51

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 188.11  E-value: 6.16e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  72 LQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIM 151
Cdd:PRK12649  67 LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSIT 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 152 SFLLISWWYGRTDANTAALQAVLYNRIGdiGFILTMAWFLMYSNTWEFQQMFMLSyDPSMIP-----------LIGLLLA 220
Cdd:PRK12649 147 SFMLIGYWRHRPESVYGATKSLLITAGG--GLFMFAGFLLLHVITGTYDIATILQ-DSELIEnikghplflitLILIFIG 223
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 221 ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIK 300
Cdd:PRK12649 224 AAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIK 303
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 301 KIVAFSTSSQLGLMMVTMGI---NQPYLAF----LHICNHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKSMPFTSSS 373
Cdd:PRK12649 304 AILAYSTISQLAYLMTMYGYttyHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIV 382
                        330       340
                 ....*....|....*....|....*..
gi 745999997 374 LTIGSLALTGMPFLTGFYSKDLIIESA 400
Cdd:PRK12649 383 ASIAALAMAGIPPLNGFLSKEMFYETS 409
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
81-417 1.84e-49

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 178.63  E-value: 1.84e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  81 FKLDYFSMLFVPVALFVTWSIMEFSMWYMH-------SDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSF 153
Cdd:PRK06525  71 LVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSW 150
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 154 LLISWwYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFMLSYDPSMIPLIGLLLAATGKSAQFGLHPW 233
Cdd:PRK06525 151 ALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSW 229
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 234 LPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMEN-NKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLG 312
Cdd:PRK06525 230 LPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLG 309
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 313 LMMVT--MGINQPYLAF----LHICNHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPF 386
Cdd:PRK06525 310 YMFFGlsLAILGSRLALegsiAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
                        330       340       350
                 ....*....|....*....|....*....|.
gi 745999997 387 LTGFYSKDLIIESANTSNINAWALTITLIAT 417
Cdd:PRK06525 389 FNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
77-470 1.87e-42

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 159.27  E-value: 1.87e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  77 LSISFKLDYFSMLFVPVALFVTWsimeFSMWYMHSDPNIDQFFKY-LLLFLITMLI--LVTANnLFQLFIGWEGVGIMSF 153
Cdd:PRK08375  69 IGIELRADSLSALFLLVTSILAI----AALLYAIGYGEHRQTRFYaLFLLLLAGLLgaLLTAD-LFNLFVFLEIMSLSSY 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 154 LLISWwYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEfqqMFMLSydpSMIPLIGLLLAATG--------KS 225
Cdd:PRK08375 144 ALVAM-GGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLN---MADLA---GALAENPTVVTAFGfvllalalKA 216
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 226 AQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIR-----FHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIK 300
Cdd:PRK08375 217 AVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRiyftvFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVK 296
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 301 KIVAFSTSSQLGLMMVTMGINQP---YLAFLHICNHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKSMPFTSSSLTIG 377
Cdd:PRK08375 297 RVLAYSTVSQMGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVA 375
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 378 SLALTGMPFLTGFYSKDLIIESANtsNINAWALTITLIATSM-TAIYSTRIIFYALLGQPRFTTSTPINENNPLLINSIK 456
Cdd:PRK08375 376 SLSLIGVPPTSGFVSKWYLVVGAV--EAGQWLVLAVLLASSLlALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSL 453
                        410
                 ....*....|....
gi 745999997 457 RLTLGSIFAGFFLT 470
Cdd:PRK08375 454 ALALLSLLLGIYAG 467
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
76-437 1.00e-40

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 155.13  E-value: 1.00e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  76 KLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLL 155
Cdd:PRK12667  73 PIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGL 152
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 156 ISWWYGRTDANTAALQAVLYNRIGD------IGFI------LTMAWFLMYSNTWEFQQMFMLSYDPSMIPLIGLLLAA-- 221
Cdd:PRK12667 153 VAYYRDRGDAVEAAIKYALIGAVGTtlyflaLAFLyatfgtLNMADLSAKIRGLSFPLTGGLAGNPPLALGVALALALwa 232
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 222 -TGKSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRF--------HPLMENNKSIQTLMLCLGAITTLFTAI 291
Cdd:PRK12667 233 fTIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFRAALSPILIILGAVSAIIGAL 311
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 292 CALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYL---AFLHICNHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKSMP 368
Cdd:PRK12667 312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMP 390
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 745999997 369 FTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALtITLIATSMTAIYSTRIIFYALLGQPR 437
Cdd:PRK12667 391 IASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPAL-VLLIASAISLVGYFRAWYSLFFGKPK 458
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
423-591 6.12e-40

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 143.85  E-value: 6.12e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  423 YSTRIIFYALLGQPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTNNILPmNTPQMTMPLHLKLMAMTVTIAGFALA 502
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFP-KPPMMTMPLYLKLLALLVTILGLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  503 MELNLMT-KNLNLKLPSHLFKFSNSLGYYPTTTHRLIPSHNLNLSQNTASlLLDLIWLEKAMPKNLSHLQMLSSTTISN- 580
Cdd:pfam06455  80 LELSNLSnKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAK-QIDQGWSEKFGPQGIAKTLMTLSKIIQNs 158
                         170
                  ....*....|.
gi 745999997  581 QTGLIKFYFLS 591
Cdd:pfam06455 159 QKGLIKIYLLS 169
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
44-437 3.89e-36

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 141.37  E-value: 3.89e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  44 AFTTSLIPTALFI------SSGQEAIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNidQ 117
Cdd:COG1008   35 ALAVSLLTLLLSLyllagfDPGTGGFQFVESYPWIPSLGISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKRPK--L 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 118 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWyGRTDANTAALQAVLYNRIGD----IGFIltMAWFLMY 193
Cdd:COG1008  113 YYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW-GGERRIYAAIKFFLYTLAGSllmlVAIL--ALYFLAG 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 194 SNTWEFQQMFMLSYDPSM-IPLIGLLLAATG-KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFH-PLM- 268
Cdd:COG1008  190 ALTFDIAELAAAPLPLTAqLLLFLAFFIAFAvKVPMFPFHTWLPDAhVEAPTAGSVLL-AGVLLKMGGYGLLRFAlPLFp 268
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 269 ENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMV------TMGINQpylAFLHICNHAFFKAMLFM 342
Cdd:COG1008  269 EASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLgifalnPLGLQG---AVLQMVSHGLITAALFL 345
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 343 CSGSIIHNLNDeQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNInaWALTITLIATSMTAI 422
Cdd:COG1008  346 LVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNP--WLAILAALGLILTAA 422
                        410
                 ....*....|....*
gi 745999997 423 YSTRIIFYALLGQPR 437
Cdd:COG1008  423 YLLWMYQRVFFGPLK 437
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
1-479 8.90e-34

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 134.94  E-value: 8.90e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997   1 MNLLTSFTLVTLMILTMPV-IMNIMNAY---KDYPFA*HVKSS*IACAFTTSLIPTALFISSGQEAIIFHwhwmtlQTLK 76
Cdd:PRK06589   1 SMILQFTTPNNLLLSTLLVgALNLTSPFatkKDSFIRNFLLITISIFFFGNILLIDLLFLKGIRAQFELM------DFGN 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  77 LSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDpNIDQFFKYLLLFLITMLILVTAN---NLFQLFIGWEGVGIMSF 153
Cdd:PRK06589  75 YSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAIN-NIDSSSRFLFFFNLTILIGVLIAlssDLFTMFVCYELLTISTA 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 154 LLISwwYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYS--NTWEFQQMFMLSYDPSMIPLIgLLLAATGKSAQFGLH 231
Cdd:PRK06589 154 FLIG--HTRNNISLSGGYKYLKILMISALLLFLPAVILIYTktGNLDFVSGGLFSKNQSIILLL-MFIYGIAKTAIFPVH 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 232 PWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLM-----LCLGAITTLFTA-ICALTQNDIKKIVAF 305
Cdd:PRK06589 231 SWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwLIFIPIVSIFYSsLKALKTDNIKKILAY 310
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 306 STSSQLGLMMVTMGINQPY---LAFLHICNHAFFKAMLFMCSGSIIhNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALT 382
Cdd:PRK06589 311 STISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLSLI 389
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 383 GMPFLTGFYSKDLIIESANTSNiNAWALTITLIATSMTAIYSTRIIFYAL--LGQPRFTTSTPINENNPLLINSIKRLTL 460
Cdd:PRK06589 390 GIPIFSGFISKFLILLAASEQN-QPWLSIIVMLVVIASSILSALYLLKILssIYKPSLSENSFITKSLPYLMQISVITCC 468
                        490
                 ....*....|....*....
gi 745999997 461 GSIFAGFFLTNNILPMNTP 479
Cdd:PRK06589 469 CALTLFYFIQILIREFLAY 487
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
79-436 9.58e-34

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 135.22  E-value: 9.58e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  79 ISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISW 158
Cdd:PRK08376  84 IIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAF 163
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 159 WYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQM-FMLSYDPSMIPLIGLLLAATG---KSAQFGLHPWL 234
Cdd:PRK08376 164 RNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLaVKMSENPTVVAKIALALFIAGlamKSGAVPVHMWL 243
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 235 PSAM-EGPTPVSALLHSSTmvVAGIFLLIR-----FHPLMeNNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTS 308
Cdd:PRK08376 244 PDAYpAAPSSISAMLLVIK--QAGLYALARvlfsiYGPAI-NLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSV 320
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 309 SQLGLMMVTMGINQPYL---------------AFLHICNHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKSMPFTSSS 373
Cdd:PRK08376 321 SQIGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIA 399
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 745999997 374 LTIGSLALTGMPFLTGFYSKDLIIESanTSNINAWALTITLIATSMTAIYSTRIIFYALLGQP 436
Cdd:PRK08376 400 FLIGAAAIVGLPPFNGFASKWLIYES--SALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPP 460
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
124-437 4.35e-33

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 134.63  E-value: 4.35e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 124 LFLITMLILVTANNLFQLFIGWEgvgIMSflLISWWYGRTDANTAAL--QAVLYNRIGDIGFILTM-AWFLMYSNT--WE 198
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWE---TMS--LSSWFLVIANHREAEIrrAGFLYLLMAHAGALAILlAFGLLARESgsYD 195
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 199 FQQMFMLSYDPSMIPLIgLLLAATGKSAQFG---LHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR--FHPLMENNK 272
Cdd:PRK06521 196 FAAMRAAHLSPFWASLV-FLLALFGFGAKAGlvpLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvvFDLLGAPGW 273
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 273 SIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGI-------NQPYLAFL-------HICNHAFFKA 338
Cdd:PRK06521 274 WWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKS 353
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 339 MLFMCSGSIIHNLNdEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESA-NTSNINAWALTITL-IA 416
Cdd:PRK06521 354 LLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLlSSPGLPQWGLKLAVpIA 432
                        330       340
                 ....*....|....*....|....*...
gi 745999997 417 TSMTAIY-----STRIIFY--ALLGQPR 437
Cdd:PRK06521 433 AAMLALTaalaaMCFVKFYgiTFLGRPR 460
PRK08168 PRK08168
NADH-quinone oxidoreductase subunit L;
99-348 9.10e-33

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236171 [Multi-domain]  Cd Length: 516  Bit Score: 132.13  E-value: 9.10e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  99 WSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRI 178
Cdd:PRK08168  83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRL 162
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 179 GDIgfILTMAWFLMYSNT--WEFQQ-MFMLSYDPSMIPLIG----LLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSS 251
Cdd:PRK08168 163 AEL--LLLAAAALAYLEVgsLSLSAlWAHLAAQGASPSLQAaallLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAG 240
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 252 TMVVAGiFLLIRFHPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHIC 331
Cdd:PRK08168 241 VVNLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLV 319
                        250
                 ....*....|....*..
gi 745999997 332 NHAFFKAMLFMCSGSII 348
Cdd:PRK08168 320 AHSLYKAHAFLSASEAV 336
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
133-447 9.92e-32

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 130.01  E-value: 9.92e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 133 VTANNLFQLFIGWEGVGIMSFLLIsWWYGRTDANTAALQAVLYNRIGdiGFILTMAWFLMYSNT--WEFQQMFMLSYDPS 210
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLG--GVLLLAGILLHYAETgsFAFGAIAGLGGTAA 186
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 211 MIPLIGLLLaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMEnnksiqtLMLCLGAITTLFTA 290
Cdd:PRK12668 187 WLILIGFGV----NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE-------LLIYIGAAMAVYGV 255
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 291 ICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYL---AFLHICNHAFFKAMLFMCSGSIIHNLNdEQDIRKMGGLFKSM 367
Cdd:PRK12668 256 FFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSM 334
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 368 PFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNInaWALTITLIATSMTAIYSTRIIF--YALLGQPRFTTSTPIN 445
Cdd:PRK12668 335 PLTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHY--VWVWLLLLLASAGTFLHFGIKLpyFAFFGGDSGLRVKDAP 412

                 ..
gi 745999997 446 EN 447
Cdd:PRK12668 413 RN 414
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
77-399 4.42e-30

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 125.23  E-value: 4.42e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  77 LSISFKLDYFSMLFVPVALFVTWSIMEFSMWY---MHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSF 153
Cdd:PRK08667  69 LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSF 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 154 LLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQqmfMLSYDPSMIPL--IGLLLAATGKSAQFGLH 231
Cdd:PRK08667 149 FLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELS---PLGASAGILSLvfLLLFLGFGIKAGIIPFH 225
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 232 PWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRF-HPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSS 309
Cdd:PRK08667 226 KWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFlMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIE 304
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 310 QLGLMMVTMGI-------NQPYLAFL-------HICNHAFFKAMLFMCSGSIIHNLNDeQDIRKMGGLFKSMPFTSSSLT 375
Cdd:PRK08667 305 NIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFL 383
                        330       340
                 ....*....|....*....|....
gi 745999997 376 IGSLALTGMPFLTGFYSKDLIIES 399
Cdd:PRK08667 384 VGAVSIAALPPFNGFASELLLYES 407
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
118-471 4.49e-30

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 123.52  E-value: 4.49e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 118 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISwwYGRTD-ANTAALQAVLYNRIGDIGFILTMAwfLMYSNT 196
Cdd:PRK07234  96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA--YPRTDrAIWVGLRYLFYSNVAMLFYLIGAV--LVYQAN 171
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 197 WEFQQMFMLSYDPSMIPLI--GLLLaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSI 274
Cdd:PRK07234 172 GTFAFSGLATADPEAFALIalGLLV----KGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLI 247
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 275 QTLmlcLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINqpylAFLHICnHAFFKAMLFMCSGsIIHNLNDE 354
Cdd:PRK07234 248 VRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYALA-HGLVKSTLFLCAG-ALPSRNFT 318
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 355 QDIRKMGGLFKSMPftsssLTIGSLALTGMPFLTGFYSKDLIIesantSNINAWALTITLIATSMTAIYSTRIIFYALLG 434
Cdd:PRK07234 319 ELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKVLTL-----KNLLPWQAIALNLAAVGTAASFWKFIFLPFSA 388
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 745999997 435 QPRFTTSTPINENNPLLINSIKRLTLGSIFAGFFLTN 471
Cdd:PRK07234 389 DDEDKKPLPGFWNAIALLLGGLFLANGVYTEAYTLGN 425
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
77-428 7.56e-30

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 123.34  E-value: 7.56e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  77 LSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPnIDqffKYLLLFLITMLI---LVTANNLFQLFIGWEGVGIMSF 153
Cdd:PRK08377  70 VGINLYIGPFAALFVLIIAIVSFIMSIFSLKAVEVEP-ID---KYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAY 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 154 LLISwwYGRT-DANTAALQAVLYNRIGDIGFILTMAwfLMYSNTWEFQQMFMLSYDPSMIPL---IGLLLAATG---KSA 226
Cdd:PRK08377 146 ALTA--YNKTgEAAEASMKYIVLGGIGSSFFLIGVA--LIYGATGTLNMAHIAQLAGTIDPTvaqVGLALLIFGlavEAE 221
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 227 QFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFHPLMENNK---SIQTLMLCLGAITTLFTAICALTQNDIKKI 302
Cdd:PRK08377 222 LFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRM 300
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 303 VAFSTSSQLGLMMVTMGINQPY---LAFLHICNHAFFKAMLFMCSGSIIHNLNDEQdIRKMGGLFKSMPFTSSSLTIGSL 379
Cdd:PRK08377 301 IAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGAL 379
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 745999997 380 ALTGMPFLTGFYSKDLIIeSANTSNINAWALTITLIATSMTAIYSTRII 428
Cdd:PRK08377 380 STVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRLI 427
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
6-415 1.52e-29

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 122.35  E-value: 1.52e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997   6 SFTLVTLMILTMPVIMNIMNA-YKDYPFA*HVKSS*IACAFTTSLIPTALFISSGQeaiIFHWHWMtlqtlklsisFKLD 84
Cdd:PRK06458   2 SYSILFALLLLIPLLASLLLFaLRKRRLVATLNVLGITLTLILALWLVFTVPDAGE---IFAAGLW----------FFID 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  85 YFSMLFVPVALFVTWSIMEFSMWYMH--------SDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 156
Cdd:PRK06458  69 DLNVFFLALIGVVGFLTSLYSIGYMRhevehgelSPVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLV 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 157 SWwYGRTDANTAALQAVLynrIGDIGfiLTMAWF---LMYSNTWEF---QQMFML---------SYDPSMIPL--IGLLL 219
Cdd:PRK06458 149 GI-YRTRASLEAAWKYII---ICSVG--VAFALFgtiLVYANAATVmgdGEMAILwtellkhasLLDPTLMKLafVFLLI 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 220 AATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAgIFLLIRFHPLME---NNKSIQTLMLCLGAITTLFTAICALT 295
Cdd:PRK06458 223 GFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDaaiGSDFPGRLLLIFGLLSVLVAAFFLLR 301
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 296 QNDIKKIVAFSTSSQLGLMMVTMGINQPY---LAFLHICNHAFFKAMLFMCSGSIIHNLnDEQDIRKMGGLFKSMPFTSS 372
Cdd:PRK06458 302 QRDIKRLFAYSSIEHMGLIAFALGIGGPLgifAALLHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGLLKVSPLTGW 380
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 745999997 373 SLTIGSLALTGMPFLTGFYSKDLIIesanTSNINA--WALTITLI 415
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLIL----TAGLARgpLLIAILLL 421
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
77-435 5.26e-27

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 115.86  E-value: 5.26e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  77 LSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFkyLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 156
Cdd:PRK08668  61 FKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMF--ALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMV 138
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 157 SwwYGRTDANTAALQAVLYNRIGDIGFIltMAWFLMYSNTWEF-----QQMFMLSYDPSMIPLIGLLLAATG--KSAQFG 229
Cdd:PRK08668 139 P--MGKKESRKASLKYFVLSAIGAYAML--YAIFLIYAKTGTFdfadiSQGLINDTSTGFALIVFLFLLAFGvaKAGIFP 214
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 230 LHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLI---------RFHPLMENNKSIQTL---MLCLGAITTLFTAICALTQ 296
Cdd:PRK08668 215 LHVWAPDAYsEAPQSFSAVL-SGQLSKLGAYGFLlvlyvlpgtKLFSEFGTYRGVPLFnyiLAWLGNISIIVGTLMAILQ 293
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 297 NDIKKIVAFSTSSQLGLMMVTMGINQPY---LAFLHICNHAFFKAMLFMCSGSIIHNlNDEQDIRKMGGLFKSMPFTSSS 373
Cdd:PRK08668 294 EDIKKLIAYSSVANGGYILVGLGLGTSLgfaGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKMPFTFAM 372
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 745999997 374 LTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWAlTITLIATSMTAIYSTRIIFYALLGQ 435
Cdd:PRK08668 373 YLVAIISLAGIPPMSGFASKWLIFEALISKGMPITA-FMAFFGSIGSFLYVFRPLAGVFLGQ 433
ND5 MTH00063
NADH dehydrogenase subunit 5; Provisional
77-429 2.31e-26

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214414 [Multi-domain]  Cd Length: 522  Bit Score: 113.05  E-value: 2.31e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  77 LSISFKLDYFSMLFVpVALFVTWSIMEFSMW-YMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLL 155
Cdd:MTH00063  37 WLINFDFDYVTFGVL-LMLLICFYYSLLYTFhYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFL 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 156 IsWWYGRTDANTAALQAVLYNRIGDIG-FILTMAWFLMYSNtwefqqmfmlsydPSMIPLIGLLLAATgKSAQFGLHPWL 234
Cdd:MTH00063 116 I-LFYDNFLSLRASVVTLVSSRFGDVClFLLIGLSCWGGSG-------------SFLCCLFFFLIVFT-KSASFPFISWL 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 235 PSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQTLMLCLgAITTLFTAICALTQNDIKKIVAFSTSSQLGLM 314
Cdd:MTH00063 181 LEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLL-LLTIFITGVSSLFFSDLKKIVALSTCNNISWC 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 315 MVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMgglfKSMPFTSSSLTIGS----LALTGMPFLTGF 390
Cdd:MTH00063 260 VLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCV----YSSILYGSWNLFYLfllvLGLSGVPFIGVF 335
                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 745999997 391 YSKDLIIESANTSNINAWALTITLIATSMTAIYSTRIIF 429
Cdd:MTH00063 336 FSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCL 374
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
44-437 3.17e-24

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 106.44  E-value: 3.17e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  44 AFTTSLIPTALFI------SSGQEAIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTwSIMEFSMWYMHSDpNIDQ 117
Cdd:PRK05846  35 ALIGTLLTLLLSLvlwigfDSSNAGFQFVEKHPWIPRFGISYHLGVDGISLLLVVLTALLT-PLAVLASWEEIKK-RVKF 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 118 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWyGRTDANTAALQAVLYNRIGD----IGFILTMAWFLMY 193
Cdd:PRK05846 113 YMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW-GGKNRIYAATKFFLYTLLGSllmlVAIIYLVVVYYNA 191
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 194 SNTWEFQQMFMLSYDPSMIPLI--GLLLAATGKSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LIRF 264
Cdd:PRK05846 192 TGTFDIADLLNLPLPPGVQYWLflAFFIAFAVKMPMFPLHTWLPDAHvQAPTAGSVLL-------AGILLkmgaygLLRF 264
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 265 H-PLMEN-NKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLmmVTMGI---NQPYL--AFLHICNHAFFK 337
Cdd:PRK05846 265 SlPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF--VTLGIfagNQLGIqgAIFQMISHGLSS 342
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 338 AMLFMCSGSIIHNLNDEqDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNInaWALTITLIAT 417
Cdd:PRK05846 343 AALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNP--VIAFIATTGL 419
                        410       420
                 ....*....|....*....|
gi 745999997 418 SMTAIYSTRIIFYALLGQPR 437
Cdd:PRK05846 420 ILAAVYSLWLYQRVMFGPVK 439
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
79-468 9.58e-24

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 105.03  E-value: 9.58e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  79 ISFKLDYFSMLFVPVALFVTWSIMEFSMwymhSDPNIDQ---FFKYLLLFLITMLI--LVTANnLFQLFIGWEGVGIMSF 153
Cdd:PRK12663  71 IQFTGDSLSALMVTTASFVATAIMAYGF----GDIEHSGrryGFPPFILLLMAGVIgsFLTGD-LFNLYVWFEVMLIASF 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 154 LLISWWyGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFM----LSYDPSMIPLIGLLLAATG-KSAQF 228
Cdd:PRK12663 146 VLITLG-QEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMrlndMGDTATLTTIALLFLLAFGmKAALF 224
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 229 GLHpWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLM--ENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFS 306
Cdd:PRK12663 225 PFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQ 303
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 307 TSSQLGLMMVTMGINQPYL---AFLHICNHAFFKAMLFMCSGSIIHnLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTG 383
Cdd:PRK12663 304 VISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGG 382
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 384 MPFLTGFYSKDLIIESAntSNINAWALTITLIATSMTAIYS-TRIIFYALLGqPRFTTSTPINENNPLLINSIKRLTLGS 462
Cdd:PRK12663 383 LPPFSGFWGKVLLVQGA--LDNGAYILLALMLITSLITMYSlFRIFFLAYWG-DKDGEEVNFKPIPLYRKLPLSILAVVV 459

                 ....*.
gi 745999997 463 IFAGFF 468
Cdd:PRK12663 460 IAMGIA 465
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
80-468 5.70e-23

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 102.50  E-value: 5.70e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  80 SFKLDYFSMLFVPVALFVTWSIMEFSMWYMhSDPNIDQFFKYLLLFLIT--MLILVTANNLFQLFIGWEGVGIMSFLLIS 157
Cdd:COG1007   65 MFVVDGFALFFKLLILLAALLVLLLSRDYL-ERRGLLRGEFYALLLFATlgMMLMASANDLLTLFLGLELLSLSLYVLVA 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 158 WWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQM-FMLSYDPSMIPL--IGLLLAATG---KSAQFGLH 231
Cdd:COG1007  144 FRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIaAALAAGGANSPLllLGLVLVLAGlafKLSAVPFH 223
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 232 PWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRF--HPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTS 308
Cdd:COG1007  224 MWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRLlvEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI 302
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 309 SQLGLMMV---TMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMP 385
Cdd:COG1007  303 AHAGYLLLglaAGTPLGVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIP 382
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 386 FLTGFYSKDLIIESAntSNINAWALTITLIATSMTAI-YSTRIIFYALLGQPrfTTSTPINENNPLLInSIKRLTLGSIF 464
Cdd:COG1007  383 PTAGFFGKFYVFSAA--VEAGLYWLAVIAVLNSVISAyYYLRVVKAMYFDEP--EEEAPISAPPGLRV-ALVIAALLVLL 457

                 ....
gi 745999997 465 AGFF 468
Cdd:COG1007  458 LGIF 461
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
115-428 1.91e-22

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 100.96  E-value: 1.91e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 115 IDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTdANTAALQAVLYNRIGDIGFILTMAWFLMYS 194
Cdd:PRK12662 109 IPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAIT 187
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 195 NTWEFQQMFMLSYD--PSMIPLIGLLLAATG---KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR-FHPL 267
Cdd:PRK12662 188 GTLNMGDMFLIIQDlpTNRAIQIGVLFIMVGlfiKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRiVYDV 266
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 268 MENNKSIQTL-----MLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPY---LAFLHICNHAFFKAM 339
Cdd:PRK12662 267 FKANFVFTTLpfnnvFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSA 346
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 340 LFMCSGSIIHNLnDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSniNAWALTITLIATSM 419
Cdd:PRK12662 347 LFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLLVGSG 423
                        330
                 ....*....|
gi 745999997 420 TA-IYSTRII 428
Cdd:PRK12662 424 LSvIYVWKIV 433
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
78-439 4.91e-22

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 99.64  E-value: 4.91e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  78 SISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNiDQFFKYLLLFLITMLI-LVTANNLFQLFIGWEGVGIMSFLLI 156
Cdd:PRK07691  70 GIVFVADMFAALLVLTSSIITFLVILYSFQTIGIERE-RYYYYPSVLFMLAGVNgAFLTGDIFNLFVFFEVMLMASYVLI 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 157 SwwYGRTDAN-TAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQ-----MFMLSYDPSMIPLIGLLLA---ATgKSAQ 227
Cdd:PRK07691 149 V--IGGTKIQlRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADisvkiAELSAGQTGLITVVAILFLfvfAT-KAGL 225
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 228 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKS--IQTLMLCLGAITTLFTAICALTQNDIKKIVAF 305
Cdd:PRK07691 226 FPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTsfTHYLILILALLTIIFGVIGAVAYFDIKKIIIY 305
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 306 STSSQLGLMMVTMGINQPYL---AFLHICNHAFFKAMLFMCSGSIIHnLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALT 382
Cdd:PRK07691 306 NIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAALSLA 384
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 745999997 383 GMPFLTGFYSKDLIIESanTSNINAWALTITLIATSMTAIYST-RIIFYALLGQPRFT 439
Cdd:PRK07691 385 GIPPLSGFYGKFFIVEG--TFEAGFYVSGIIVLLSSLLVLYSViKIFLKGFWGEPKGY 440
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
72-392 2.41e-20

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 94.71  E-value: 2.41e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  72 LQTLKLSISFKLDYFSMLFVPVALFVTwSIMEFSMWYMHSDPNIdqfFKYLLLFLITMLILV-TANNLFQLFIGWEGVGI 150
Cdd:PRK12561  46 LPQIGLEWSLGVDGLSMPLVLLSGLIT-TLSIFASWKVTRKPRL---FYFLMLVLYSAQIGVfLAQDLLLFFLMWELELV 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 151 MSFLLISWWYGRtDANTAALQAVLYNRIGDIgFILTMAWFLMYSN---TWEFQQMFMLSYDPSMIPLI--GLLLAATGKS 225
Cdd:PRK12561 122 PVYLLISIWGGQ-KRLYAATKFILYTALASI-FILVAGLALALSGdtfTFDLAELGAKSYPLALELLLyaGFLIAFGVKL 199
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 226 AQFGLHPWLPSAM-EGPTPVSallhsstMVVAGIFL------LIRFHPLMENNKSIQ--TLMLCLGAITTLFTAICALTQ 296
Cdd:PRK12561 200 PIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFNVQMLPDAHVYfaPALAILGVVNIIYGALNAFAQ 272
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 297 NDIKKIVAFSTSSQLGLMMV------TMGINQpylAFLHICNHAFFKAMLFMCSGSI---IHNLNdeqdIRKMGGLFKSM 367
Cdd:PRK12561 273 DNVKRRLAYSSVSHMGFVLLgiaaftDLGISG---AMLQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVM 345
                        330       340
                 ....*....|....*....|....*
gi 745999997 368 PFTSSSLTIGSLALTGMPFLTGFYS 392
Cdd:PRK12561 346 PKTFALFTASSMASLALPGMSGFVS 370
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
80-437 4.37e-19

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 90.27  E-value: 4.37e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  80 SFKLDYFSMLFVPVALFVTWSIMEFSMWYMhSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWW 159
Cdd:PRK05777  68 MLVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALR 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 160 YGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMF---MLSYDPSMIPLIGLLLAATG---KSAQFGLHPW 233
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAkalADGSGNSLLLLFGLVFLLVGlafKLSAVPFHMW 226
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 234 LPSAMEG-PTPVSALLHSSTMVvAGIFLLIR-----FHPLMEnnkSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFST 307
Cdd:PRK05777 227 TPDVYEGaPTPVTAFLATAPKI-AAFAVLLRllvvaFGGLSE---DWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 308 SSQLGLMMV--TMGINQPYLA-FLHICNHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGM 384
Cdd:PRK05777 303 IAHAGYLLVglAAGTAEGYSAvLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGI 382
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 745999997 385 PFLTGFYSKDLIIESANTSniNAWALTITLIATSM-TAIYSTRIIFYALLGQPR 437
Cdd:PRK05777 383 PPTAGFWGKFYVFEAAVEA--GLWWLAVIGVLNSAiGAFYYLRVIKLMYFDEPP 434
PRK08601 PRK08601
NADH dehydrogenase subunit 5; Validated
81-352 8.15e-17

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 236310 [Multi-domain]  Cd Length: 509  Bit Score: 83.55  E-value: 8.15e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  81 FKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWY 160
Cdd:PRK08601  68 WHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNK 147
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 161 GRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWefqQMFMLSYDPSMIPL-------IGLL--LAATGKSAQFGLH 231
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEW---QLTSVLSNENLAQLgtwektgINLLliLAVMIPAAQWPFQ 224
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 232 PWLPSAMEGPTPVSALLHSStMVVAGIFLLIRFHPLMENNKSiQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQL 311
Cdd:PRK08601 225 RWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIA-QILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQM 302
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 745999997 312 GLMMVTMGINQPYLAFLHICNHAFFKAMLFMCSGSIIHNLN 352
Cdd:PRK08601 303 GFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
208-415 8.95e-16

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 80.18  E-value: 8.95e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 208 DPSMIpLIGLLLAATG---KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFHPLMENNKSIQT---LMLC 280
Cdd:PRK08676 201 SPSVL-GASFLFIFIGflaKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQfsnVLIG 278
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 281 LGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQP---YLAFLHICNHAFFKAMLFMCSGsIIHNLNDEQDI 357
Cdd:PRK08676 279 LGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPlalFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRF 357
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 745999997 358 RKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESAntSNINAWALTITLI 415
Cdd:PRK08676 358 DRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL--GGISVWLVLAVLL 413
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
230-399 2.13e-15

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 79.49  E-value: 2.13e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 230 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFhPLMENNKSI--QTLMLCLGAITTLFTAICALTQNDIKKIVAFST 307
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTL-SLLGGNAPLwwGVALLVLGMITAFVGGLYALMEHNIQRLLAYHT 277
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 308 SSQLGLMMVTMG-------INQPYLAFL-------HICNHAFFKAMLFMCSGSIIHNlNDEQDIRKMGGLFKSMPFTSSS 373
Cdd:PRK08042 278 LENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIA 356
                        170       180
                 ....*....|....*....|....*.
gi 745999997 374 LTIGSLALTGMPFLTGFYSKDLIIES 399
Cdd:PRK08042 357 MLVGLMAMAALPPLNGFAGEWVIYQS 382
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
125-437 6.92e-15

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 77.70  E-value: 6.92e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 125 FLITMLILVT-------ANNLFQLFIGWEGVGIMSFLLISwwYGRTDANT-AALQAVLYNRIGDIGFILTMAwfLMYSNT 196
Cdd:PRK12665 113 FLPTYLILVAgvsnaflAGDLFNLYVGFEILLVASYVLLT--LGATAARVrAGVTYVMVSMVSSLLFLIGIA--LVYAAT 188
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 197 WEFQqMFMLSYDPSMIP------LIGLLLAATG-KSAQFGLHPWLP-SAMEGPTPVSA----LLhssTMVvaGIFLLIRF 264
Cdd:PRK12665 189 GTLN-MADLAVRLDELPsgtrtaLFAVLLVAFGiKAAVFPLSFWLPdSYPTAPAPVTAvfagLL---TKV--GVYAIIRT 262
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 265 HPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPY---LAFLHICNHAFFKAMLF 341
Cdd:PRK12665 263 HTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLF 342
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 342 MCSGsIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIES-ANTSNINAWALTITLIATSMT 420
Cdd:PRK12665 343 LVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVAGGVVTSLL 421
                        330
                 ....*....|....*...
gi 745999997 421 AIYS-TRIIFYALLGQPR 437
Cdd:PRK12665 422 TLYAvARVWTKAFWRARE 439
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
111-423 8.64e-14

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 73.97  E-value: 8.64e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 111 SDPNIDQ-FFKYLLLFLITMLIL--VTANNLFQLFIGWEGVGIMSFLLISWWyGRTDANTAALQAVLYNRIGDI----GF 183
Cdd:PRK06473  99 SDESIQRpRFYYSLLLLLNAGVSgaFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGIlilvSF 177
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 184 iLTMAWFLMYSN-TWEFQQMFMLSYDPSMIPLIGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLL 261
Cdd:PRK06473 178 -LGLVWLSGASSfDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGL 255
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 262 IRF--HPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPY---LAFLHICNHAFF 336
Cdd:PRK06473 256 LRFgvGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLsilAAVFQMISHGLI 335
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 337 KAMLFMCSGsIIHNLNDEQDIRKMGGLF---KSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESanTSNINAWALTIT 413
Cdd:PRK06473 336 SALLFLLVG-VVYKKTGSRDVDVLRGLLnpeRGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRG--SFPIFPVQTLLC 412
                        330
                 ....*....|
gi 745999997 414 LIATSMTAIY 423
Cdd:PRK06473 413 MIGTGLTAVY 422
PRK06277 PRK06277
energy conserving hydrogenase EhbF;
244-436 1.47e-13

energy conserving hydrogenase EhbF;


Pssm-ID: 235767 [Multi-domain]  Cd Length: 478  Bit Score: 73.14  E-value: 1.47e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 244 VSALLHSS---TMVVAGIFLLIRFHPLMENnKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGI 320
Cdd:PRK06277 233 GSALLQTFskfVLVALMLVIFKLFGGLSYF-PSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLAL 311
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 321 NQPY---LAFLHICNHAFFKAMLFMCSGsIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLII 397
Cdd:PRK06277 312 GTPLgivAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLA 390
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 745999997 398 ESANTSNINawALTITLIATSMTAIYSTRIIFYALLGQP 436
Cdd:PRK06277 391 QAAMQANMP--ELAIIMIIVSIGTFVSMMKAFYLIYLKP 427
Proton_antipo_N pfam00662
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ...
69-119 5.24e-13

NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.


Pssm-ID: 459895 [Multi-domain]  Cd Length: 51  Bit Score: 63.60  E-value: 5.24e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 745999997   69 WMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQFF 119
Cdd:pfam00662   1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
72-423 1.19e-12

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 70.51  E-value: 1.19e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  72 LQTLKLSISFKLDYFSMLFVPVALFVTWsIMEFSMWYMHSDPNIdqFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIM 151
Cdd:PRK07363  66 NEPLGLSYSLGVDGLSLPLLVLNSLLTW-IAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIP 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 152 SFLLISWWYGRTDAnTAALQAVLYNRIGdiGFILTMAW----FLMYSNTWEFQQMFM--LSYDPSMIPLIGLLLAATGKS 225
Cdd:PRK07363 143 FYLLIAIWGGEKRG-YASIKFLIYTAVS--GLLVLAAFlgivWLSGSTSFDYDAISTqnLSLNTQLILLTGLLLGFGIKI 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 226 AQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLM--ENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIV 303
Cdd:PRK07363 220 PLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLfpQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMV 299
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 304 AFSTSSQLGLMMVTMGINQPYL---AFLHICNHAFFKAMLFMCSGsIIHNLNDEQDIRKMGGLF---KSMPFTSSSLTIG 377
Cdd:PRK07363 300 AYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLA 378
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 745999997 378 SLALTGMPFLTGFYSKDLIIESANTSNINAWALTItlIATSMTAIY 423
Cdd:PRK07363 379 GMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCI--VASGLTAVY 422
ndhD CHL00011
NADH dehydrogenase subunit 4
64-430 2.53e-11

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 66.12  E-value: 2.53e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  64 IFHWHWmtlqtlKLSIsfklDYFSMLFVPVALFVTwSIMEFSMWYMHSDPnidQFFKYLLLFLITMLI-LVTANNLFQLF 142
Cdd:CHL00011  73 FFDFHW------RLGI----DGLSIGPILLTGFIT-TLATLAAWPVTRNS---RLFYFLMLAMYSGQIgLFSSRDLLLFF 138
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 143 IGWEGVGIMSFLLISWWYGRTDAnTAALQAVLYNRIGDIGF---ILTMAWFLMYSNTWEFQQMFMLSYDPS--MIPLIGL 217
Cdd:CHL00011 139 IMWELELIPVYLLLSMWGGKKRL-YSATKFILYTAGGSIFLligVLGMGLYGSNEPTLNFETLANQSYPVAleILFYIGF 217
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 218 LLAATGKSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGIFL------LIRFH-PLMENNKSI-QTLMLCLGAITTLF 288
Cdd:CHL00011 218 LIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRINmELLPHAHSIfSPWLVIVGAIQIIY 290
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 289 TAICALTQNDIKKIVAFSTSSQLGLMMVTMG-INQPYL--AFLHICNHAFFKAMLFMCSGSI---IHNLNDEQdirkMGG 362
Cdd:CHL00011 291 AASTSLGQRNLKKRIAYSSVSHMGFIIIGIGsITDTGLngAILQIISHGFIGAALFFLAGTSydrIRLVYLDE----MGG 366
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 745999997 363 LFKSMP--FTS-SSLTIGSLALTGMpflTGFYSKDL----IIESANTSNINAWALTITL-IATSMTAIYS---TRIIFY 430
Cdd:CHL00011 367 IAIPMPkiFTMfSSFSMASLALPGM---SGFVAELIvffgIITSQKYLLMPKILITFVMaIGMILTPIYLlsmLRQMFY 442
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
120-429 1.36e-10

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 63.79  E-value: 1.36e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 120 KYLLL-FLITMLIL-------VTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFL 191
Cdd:MTH00226 127 KYLTKsFLICMLILefllyavFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLY 206
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 192 MYSNTWEFQQMFMLSYDPSMIP----LIGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRFHP 266
Cdd:MTH00226 207 NIHGTTDYLTLASCSHVVSEQTqkwiFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWP 286
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 267 LME-NNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLM---MVTMGINQPYLAFLHICNHAFFKAMLFM 342
Cdd:MTH00226 287 ILPlGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVsitLVTHDIIGLTGSIFIMLAHGIVSSLLFI 366
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 343 CSgSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSN--INAWALTITLIATSMT 420
Cdd:MTH00226 367 LV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNpiIGVFVCSGVILSAVYS 445

                 ....*....
gi 745999997 421 AIYSTRIIF 429
Cdd:MTH00226 446 FYFANRVTF 454
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
117-422 5.37e-10

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 62.03  E-value: 5.37e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 117 QFFKYLLLFLITMLILVTA-NNLFQLFIGWEGVGIMSFLLISWWYGRtDANTAALQAVLYNRIGDIgFIL----TMAwFL 191
Cdd:PRK02546 115 KLFYFLMLAMYGGQIAVFAvQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSL-FILlaalAMA-FY 191
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 192 MYSNTWEFQQMFMLSYDPSMIPLI--GLLLAATGKSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LI 262
Cdd:PRK02546 192 GDTPTFDMTALAAKDFGLGFQLLCyaGLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLL-------AGILLkmggyaLL 264
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 263 RFHPLM--ENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYL---AFLHICNHAFFK 337
Cdd:PRK02546 265 RMNAGMlpDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGtsgAMLQMISHGLIG 344
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 338 AMLFMCSGSI---IHNLNDEQdirkMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSniNAWALTITL 414
Cdd:PRK02546 345 ASLFFLVGATydrTHTLMLDE----MGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATS--DAYTLPFRV 418

                 ....*...
gi 745999997 415 IATSMTAI 422
Cdd:PRK02546 419 VVVFLAAV 426
ndhB CHL00049
NADH dehydrogenase subunit 2
224-469 6.52e-09

NADH dehydrogenase subunit 2


Pssm-ID: 176990 [Multi-domain]  Cd Length: 494  Bit Score: 58.48  E-value: 6.52e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 224 KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR-----FHPLMENNKSIQTLMLCLGAITTLFTAIcalTQN 297
Cdd:CHL00049 227 KLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRifdipFYFSSNEWHLLLEILAILSMILGNLIAI---TQT 302
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 298 DIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFkaMLFMCSGS----IIHNLNDEQD-IRKMGGLFKSMPFTSS 372
Cdd:CHL00049 303 SMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLAL 380
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 373 SLTIGSLALTGMPFLTGFYSKDLIIESANTSNInaWALTITLIATSMTAIY-STRIIFYALLGQPRFTTSTPINENNPLL 451
Cdd:CHL00049 381 SLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGL--YFLVSIGLLTSVISIYyYLKIIKLLMTGRNQEITPYVRNYRRSPL 458
                        250       260
                 ....*....|....*....|....
gi 745999997 452 I--NSIKR----LTLGSIFAGFFL 469
Cdd:CHL00049 459 RsnNSIELsmivCVIASTIPGISM 482
ND2 MTH00112
NADH dehydrogenase subunit 2; Provisional
230-414 9.90e-09

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214423 [Multi-domain]  Cd Length: 346  Bit Score: 57.52  E-value: 9.90e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 230 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfhpLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSS 309
Cdd:MTH00112 111 FHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIA 185
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 310 QLGLMMVTMGINqPYLAFLhicnhAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTG 389
Cdd:MTH00112 186 HLGWMIAIITYS-PKLTLL-----TFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTG 259
                        170       180
                 ....*....|....*....|....*
gi 745999997 390 FYSKDLIIESANTSNINAWALTITL 414
Cdd:MTH00112 260 FMPKWLILQELTKQNMTPTATIMAM 284
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
45-424 1.27e-08

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 57.77  E-value: 1.27e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  45 FTTSLIPTALFISSGQEAIIFHWHWMTLQTLKL---SISFKLDYFSMLF-------VPVALFVTWSIMEFSMwymhsdpn 114
Cdd:MTH00204  40 LFSTLVLWGAFDGEGQFQFINLIEWIISPTLNFqwgPLVFAVDGVSLFFillttllIPICILISWKSIKFLF-------- 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 115 idQFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMawFLMY 193
Cdd:MTH00204 112 --KEFLLCLLFLEVLLIGVfSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGI--FQLY 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 194 SNT----WEFQQMFMLSYDPSMIPLIGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LI 262
Cdd:MTH00204 188 SITgttdYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVIL-------AGILLklggygFL 260
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 263 RF-HPLM-ENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLmmVTMGINQPYL-----AFLHICNHAF 335
Cdd:MTH00204 261 RFsWPLFpAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHGF 338
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 336 FKAMLFMCSgSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNInawaLTITLI 415
Cdd:MTH00204 339 VSSALFIAV-TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSL----GLGVLV 413
                        410
                 ....*....|.
gi 745999997 416 ATSM--TAIYS 424
Cdd:MTH00204 414 TSGMvwSAAYS 424
PRK06459 PRK06459
hydrogenase 4 subunit B; Validated
83-319 4.77e-08

hydrogenase 4 subunit B; Validated


Pssm-ID: 235806 [Multi-domain]  Cd Length: 585  Bit Score: 55.95  E-value: 4.77e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  83 LDYFSMLFVPVALFVTWsimeFSMWYMHSDPNIDQFFKYLLLfliTMLILVTANNLFQLFIGWEGVGIMSFLLIswwYGR 162
Cdd:PRK06459  46 LSFFSIISTIVWILASL----YSIEYDHYGKWLSSLYILTIL---GMAIVLTSDNYLLFLAGWEIMTIPSYVAI---ALT 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 163 TDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFqqmfmlSYDPSMIPLIGLLLAATGKSAQFGLH--PWLPSAM-E 239
Cdd:PRK06459 116 KKNKRPAFVFMAFGELSTVLILAGFAWAFIISGTTNF------SYLPSPVPLILASFGFIIKMGMMPFLvsEWLPIAHgN 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 240 GPTPVSALLhSSTMVVAGIFLLIRFHPLMENNKS--IQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVT 317
Cdd:PRK06459 190 APSNFSAIL-SATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVA 268

                 ..
gi 745999997 318 MG 319
Cdd:PRK06459 269 LG 270
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
81-424 6.01e-08

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 55.33  E-value: 6.01e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  81 FKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNIDQ-FFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLISW 158
Cdd:MTH00206  55 LSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRQrIYITLLIVLQLFLILFfSSSNLLLFYILFEASLIPTLLLITR 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 159 WYGRTDANTAALQAVLYNRIGDIGFILTMAW--FLMYSNTWEFQQMFMLSYDPSMIPLIGLLLAATGKSAQFGLHPWLPS 236
Cdd:MTH00206 135 WGNQKERLNAGYYFLFYTLIGSLPLLIALLFlqNSLGSLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPK 214
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 237 A-MEGPTpvsallhSSTMVVAGIFL------LIRFHPLMEN-NKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTS 308
Cdd:MTH00206 215 AhVEAPV-------AGSMVLAGVLLklggygMMRIILILGPsTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSV 287
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 309 SQLGLM------MVTMGINQPYLAFLhicNHAFFKAMLFmCSGSIIHNLNDEQDIRKMGGLFKSMPFTSSSLTIGSLALT 382
Cdd:MTH00206 288 SHMSLVtagilsGSPWGFKGALLLMI---AHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANL 363
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 745999997 383 GMPFLTGFYSKDLIIESANTSNInaWALTITLIATSMTAIYS 424
Cdd:MTH00206 364 GLPPFPNLFGELLIITSLFSWSN--FTLPLLGLGFLFTAIYS 403
ND2 MTH00200
NADH dehydrogenase subunit 2; Provisional
122-476 7.09e-08

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177246 [Multi-domain]  Cd Length: 347  Bit Score: 54.59  E-value: 7.09e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 122 LLLFLITMLILvTANNLFQLFIGWEgVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQ 201
Cdd:MTH00200  11 LSLGLGTLLTF-SSSHWFLIWLGLE-INTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISE 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 202 MFmlsydpSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNksiqtLMLCL 281
Cdd:MTH00200  89 ML------GPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSN-----ILLLL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 282 GAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMginqPYLAFLHICNhaFFKAMLFMCSGSIIHNLNDEQDIRKMG 361
Cdd:MTH00200 158 GLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGL----VYSPNLALLY--LLLYVIITLTVFLLLNLLNSTKINSLS 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 362 GLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESAnTSNINAWALTITLIATSMTAIYSTRIIFYALLGQPRFTTS 441
Cdd:MTH00200 232 SSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQEL-SKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQIN 310
                        330       340       350
                 ....*....|....*....|....*....|....*
gi 745999997 442 TPINENNPLLINSIKRLTLGSIFAGFFLTNNILPM 476
Cdd:MTH00200 311 MMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLLFL 345
PRK02504 PRK02504
NAD(P)H-quinone oxidoreductase subunit N;
80-393 1.94e-07

NAD(P)H-quinone oxidoreductase subunit N;


Pssm-ID: 235044 [Multi-domain]  Cd Length: 513  Bit Score: 53.90  E-value: 1.94e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  80 SFKLDYFSMLFVPVALFVTWSIMEFSMWYM-HSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISw 158
Cdd:PRK02504  73 SFNADNLSIAFRAIIALSTLVTLLMSWRYVeQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTG- 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 159 wYGRTDA--NTAALQAVLYNRIGDIGFILTMAwfLMYSNTWEFQQM----FMLSYDPSMIPLIGLLLAATG---KSAQFG 229
Cdd:PRK02504 152 -YMKRDPrsNEAALKYLLIGAASSAIFLYGSS--LLYGLSGGSTQLsaiaLALITSPSLGLALALVFVIAGiafKISAVP 228
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 230 LHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFhplmennksiqtLMLCLGAITT----LFTA----------ICAL 294
Cdd:PRK02504 229 FHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRL------------LVTAFPSFDEqwklLFTAlailsmvlgnVVAL 295
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 295 TQNDIKKIVAFSTSSQLGLMMVTM--GINQPYLAFLHicnhaFFKAMLFMCSGS----IIHNLNDEQD-IRKMGGLFKSM 367
Cdd:PRK02504 296 AQTSMKRMLAYSSIGQAGFVMIGLvaGTEAGYASMVF-----YLLAYLFMNLGAfacvILFSLRTGTDqISDYAGLYQKD 370
                        330       340
                 ....*....|....*....|....*.
gi 745999997 368 PFTSSSLTIGSLALTGMPFLTGFYSK 393
Cdd:PRK02504 371 PLLTLGLSLCLLSLGGIPPLAGFFGK 396
ND4 MTH00163
NADH dehydrogenase subunit 4; Provisional
76-318 2.05e-07

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214443 [Multi-domain]  Cd Length: 445  Bit Score: 53.62  E-value: 2.05e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  76 KLSISFKLDYFSMLFVPVALFVTwSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFL 154
Cdd:MTH00163  47 NISYFFGLDLLSFGLILLSFWIC-MLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTfSSMNLLLFYIFFESSLIPTLF 125
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 155 LISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFMLSYDPSMIPLIgLLLAATGKSAQFGLHPWL 234
Cdd:MTH00163 126 LILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGSLNFLWYLS-MILAFLVKMPMFFVHLWL 204
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 235 PSA-MEGPTpvsallhSSTMVVAGIFL------LIRFHPLMEN-NKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFS 306
Cdd:MTH00163 205 PKAhVEAPV-------SGSMILAGVLLklggygLLRVMSFFSKlGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYS 277
                        250
                 ....*....|..
gi 745999997 307 TSSQLGLMMVTM 318
Cdd:MTH00163 278 SVAHMGLVLGGL 289
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
36-322 2.27e-07

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 53.59  E-value: 2.27e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  36 VKSS*IACAFTTSLIPTALfissgqeaIIFHWHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFSMWYMHSDPNI 115
Cdd:MTH00014  18 KYPWSWALTFSTLLLLSLF--------TLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAP 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 116 DQFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSN 195
Cdd:MTH00014  90 KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNN 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 196 TWefqQMFMLSYDPSMIPLIGL-----LLAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIR 263
Cdd:MTH00014 170 SL---SMLMSSMEPPSIYLMNLwwlitILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLR 239
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 264 F-HPLMENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQ 322
Cdd:MTH00014 240 MsSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNT 299
PRK12664 PRK12664
putative monovalent cation/H+ antiporter subunit D; Reviewed
277-406 3.13e-06

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237164 [Multi-domain]  Cd Length: 527  Bit Score: 50.11  E-value: 3.13e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 277 LMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPY-----LAFLHICNHAFFKAMLFMCSGSIIhNL 351
Cdd:PRK12664 203 ILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVI-NR 281
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 745999997 352 NDEQDIRKMGGLFKsMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNIN 406
Cdd:PRK12664 282 TRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
231-455 7.88e-06

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 48.49  E-value: 7.88e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 231 HPWLPSAMEG-PTPVSALLhsSTMVVAGIF-LLIRFHPLMEnnksiqtLMLCLGAITTLFTAICALTQNDIKKIVAFSTS 308
Cdd:MTH00196 115 HMWAPDVYEGaPTKTTALL--AIVPKLGIFsILVSIGLNVN-------ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGI 185
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 309 SQLGLMMVTMGIN-----QPYLAFLhicnhaFFKAMLFMCSGSIIHNLNDEQD-IRKMGGLFKSMPFTSSSLTIGSLALT 382
Cdd:MTH00196 186 GHMGFVLWGIEIGsfesiQASLVYL------FIYIIMSICVFSIILALNVYKNlIIEFSGLSRRLPILAITLALTFLSIA 259
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 745999997 383 GMPFLTGFYSKDLIIESANTSNINAWALtITLIATSMTAIYSTR---IIFYALLGQPRFTTSTPINENNPLLINSI 455
Cdd:MTH00196 260 GIPPLVGFLGKWLILLSGVVYQYYLIFL-LAVFCSVIAGVYYVRivkILFFQANSFLLISTKILKKENKINLRKAL 334
ND4 MTH00150
NADH dehydrogenase subunit 4; Provisional
77-314 8.43e-06

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214435 [Multi-domain]  Cd Length: 417  Bit Score: 48.30  E-value: 8.43e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  77 LSISFKLDYFSMLFVPVALFVTwSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLL 155
Cdd:MTH00150  16 LSELFSVDSMSSLLISLSLWIS-GLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAfSVSSLLMFYFFFEASLIPTLLL 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 156 ISWWYGRTDAntaaLQAVLYNRIGDIG------FILTMAWFLMYSNTWEFQQMFMLSYDPSMIPLIGLLLAATGKSAQFG 229
Cdd:MTH00150  95 ILGWGYQPER----LQAGMYMMLYTVGaslpllLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYP 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 230 LHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFHPLME-NNKSIQTLMLCLGAITTLFTAICALTQNDIKK 301
Cdd:MTH00150 171 FHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSlSSSSFSIFLISLSLWGGVLTSLICLRQSDVKS 243
                        250
                 ....*....|...
gi 745999997 302 IVAFSTSSQLGLM 314
Cdd:MTH00150 244 LIAYSSVGHMSLV 256
ND2 MTH00144
NADH dehydrogenase subunit 2; Provisional
184-423 4.26e-05

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214432 [Multi-domain]  Cd Length: 328  Bit Score: 46.03  E-value: 4.26e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 184 ILTMAWFLMYSNTWEFQQMFMLsydpsmipLIGLLLaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIR 263
Cdd:MTH00144  69 LLIFGSLIMYNLSFSWFSMSLL--------LLGLCL----KLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSN 136
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 264 FHPLMEnnksIQTLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHICNHAFFKAMLFMC 343
Cdd:MTH00144 137 FLDLYW----LAYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSL 212
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 344 SGSIIHNLndeqdirKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESanTSNINAWALTITLIATSMTAIY 423
Cdd:MTH00144 213 WSGDSGSM-------KDLGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLIS--SMESSPLLLILLLLLGSLISLF 283
ND2 MTH00070
NADH dehydrogenase subunit 2; Provisional
209-416 1.70e-04

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177142 [Multi-domain]  Cd Length: 346  Bit Score: 44.14  E-value: 1.70e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 209 PSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNksiqtLMLCLGAITTLF 288
Cdd:MTH00070  90 QTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSN-----LLIIMGLLSTLI 164
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 289 TAICALTQNDIKKIVAFSTSSQLGLMMVTMGINqPYLAFLHICNHAFFKAMLFMcsgsIIHNLNdEQDIRKMGGLFKSMP 368
Cdd:MTH00070 165 GGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFL----MLMNLN-STNINKLSSSWSKNP 238
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 745999997 369 FTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTITLIA 416
Cdd:MTH00070 239 TLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSA 286
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
67-314 1.77e-04

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 44.20  E-value: 1.77e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  67 WHWMTLQTLKLSISFKLDYFSMLFVPVALFVTWSIMEFsmwymHSDPNIDQFFKYLLLFLITMLILVTANNLFQLFIGWE 146
Cdd:MTH00044  50 WHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSN-----NSPNNQRTFISLIIIILTALIITFSSLELILFYIAFE 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 147 GVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWFLMYSNTWEFQQMFMLSYDPSMIPLIGL-----LLAA 221
Cdd:MTH00044 125 TTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIwwifcILAF 204
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 222 TGKSAQFGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LIR-----FHPLMENNKSIQTLMLCLGAittLFT 289
Cdd:MTH00044 205 LVKMPIYGFHLWLPKAhVEAPVAGS-------MILAAILLklggygLIRlinlfSLPSANNISFILIVFCCWGA---LIT 274
                        250       260
                 ....*....|....*....|....*
gi 745999997 290 AICALTQNDIKKIVAFSTSSQLGLM 314
Cdd:MTH00044 275 SIICLRQTDLKALIAYSSVGHMSLV 299
ND4 MTH00205
NADH dehydrogenase subunit 4; Provisional
77-316 2.74e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214457 [Multi-domain]  Cd Length: 448  Bit Score: 43.81  E-value: 2.74e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  77 LSISFKLDYFSMLFVPVALFVTwSIMEFSMWYMHSDPNIDQFFKYLLLFLITMLIL-VTANNLFQLFIGWEGVGIMSFLL 155
Cdd:MTH00205  49 ISSSFSFDSLSLPLIMLSFWIS-LLMVLASYKVFKSNKNSKLFTVSVIMLLLILILsFSVDNLLLFYITFEASLIPTLIL 127
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 156 ISWWYGRTDANTAALQAVLYNRIGDIGFILTMAWF--LMYSNTWEFQQMFMLSYDPSMIPLIGLLLAATGKSAQFGLHPW 233
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLnsLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLW 207
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 234 LPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFHPLM-ENNKSIQTLMLCLGAITTLFTAICALTQNDIKKIVAF 305
Cdd:MTH00205 208 LPKAhVEAPV-------SGSMILAGVLLklggygLIRITSMLyKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAY 280
                        250
                 ....*....|.
gi 745999997 306 STSSQLGLMMV 316
Cdd:MTH00205 281 SSVGHMGLMVV 291
ND2 MTH00199
NADH dehydrogenase subunit 2; Provisional
231-428 4.60e-04

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177245 [Multi-domain]  Cd Length: 460  Bit Score: 43.08  E-value: 4.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 231 HPWLPSAMEG-PTPVSALLhsSTMVVAGIFLLirfhpLMENNKSIQTLMLClGAITTLFTAICALTQNDIKKIVAFSTSS 309
Cdd:MTH00199 210 HMWAPDVYEGaPTITTALL--ATVPKIGVFSI-----LVQIGPVTNVVLIC-AVLSIIYGAIGALNQTKIKRLLAYSGIG 281
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 310 QLGLMMVTMGIN-----QPYLAFLHIcnhaffKAMLFMCSGSIIHNLNDEQD-IRKMGGLFKSMPFTSSSLTIGSLALTG 383
Cdd:MTH00199 282 HMGFILFGVAIGsfesiQASLIYMII------YVIMSICSFSIILSLKLTKGlIVEVSGLSRKNPVIALTLALTFLSIAG 355
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 745999997 384 MPFLTGFYSKDLIIESANTSniNAWALTITLIATSMTA-IYSTRII 428
Cdd:MTH00199 356 IPPLAGFLSKWLILLSGVSS--GYYLICIIAVLSSVIAgVYYVRVV 399
ND2 MTH00041
NADH dehydrogenase subunit 2; Validated
203-423 5.52e-04

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 177116 [Multi-domain]  Cd Length: 349  Bit Score: 42.61  E-value: 5.52e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 203 FMLSYDPSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFhplmeNNKSIQTLMLCLG 282
Cdd:MTH00041  84 WSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISI-----SNLLNSNILILCG 158
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 283 AITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINqPYLAFLHICNHAFFKAMLFmcsgsIIHNLNDEQDIRKMGG 362
Cdd:MTH00041 159 ILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIYIIINTSIF-----LIGNNFSLSTLSHLNK 232
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 745999997 363 LFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESanTSNINAWALTITLIATSMTAIY 423
Cdd:MTH00041 233 LSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYC--LIQNNSILISIILIIGSLLSLF 291
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
49-424 1.37e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 41.48  E-value: 1.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997  49 LIPTALFISSGQEAIIFHWHWMTLQTLKLSISFKLDYfSMLFVPVALFVTW----SIMEFSMWYMHSDPNIDQFFKYLLL 124
Cdd:MTH00127  23 LWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMAT-DPLSTPLLVLTCWllplMILASQNHTAPEPINRQRMYITLLT 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 125 FLITMLILV-TANNLFQLFIGWEGVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIGfiLTMAWFLMYSN-------T 196
Cdd:MTH00127 102 SLQIFLILAfGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP--LLVALLLLQNStgtlsmlT 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 197 WEFQQMFMLSYDPSMIPLIGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRFHPLMENNKSIQ 275
Cdd:MTH00127 180 LQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAhVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELS 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 276 TLMLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYL---AFLHICNHAFFKAMLFmCSGSIIHNLN 352
Cdd:MTH00127 260 YPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGftgALILMIAHGLTSSALF-CLANTNYERT 338
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 745999997 353 DEQDIRKMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESanTSNINAWALTITLIATSMTAIYS 424
Cdd:MTH00127 339 HSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITS--LFNWSPWTLALTGLGTLITAGYS 408
ND2 MTH00011
NADH dehydrogenase subunit 2; Validated
202-442 1.48e-03

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 164587 [Multi-domain]  Cd Length: 330  Bit Score: 40.92  E-value: 1.48e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 202 MFMLSYDPSMIPLIG---LLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLmennkSIQTLM 278
Cdd:MTH00011  76 MTMMWSFPSLLKNITalmLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMM 150
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 279 LCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVtMGINQPYLAFLHICNHAFFKAMLFMcsgsiIHNLNDEQDIR 358
Cdd:MTH00011 151 TSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTM-ISVFSPSMAILYFMTYIIITTPLML-----LFAYLNAFSTK 224
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 359 KMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWALTItLIATSMTAIYSTRIIFYALLGQPRF 438
Cdd:MTH00011 225 FNSKISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVL-IVGSLMNLFYYLNLIFNFMYLSPTF 303

                 ....
gi 745999997 439 TTST 442
Cdd:MTH00011 304 SSLK 307
ND2 MTH00197
NADH dehydrogenase subunit 2; Provisional
119-423 3.27e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177244 [Multi-domain]  Cd Length: 323  Bit Score: 40.04  E-value: 3.27e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 119 FKYLLLFLITMLILVTANNLFQLFIGWEgVGIMSFLLISWWYGRTDANTAALQAVLYNRIGDIgfILTMAWFLMYSNTWe 198
Cdd:MTH00197   1 FLFLFIIFGGVLFSLSSSNWFLVWIGME-LNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSA--LLLMGGSLSFSNLY- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 199 fqqmfmLSYDPSMIPLIGLLLaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfhplMENNKSIQTLM 278
Cdd:MTH00197  77 ------LSLLSVVLVILGLLL----KLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL------AFNSSSFMGLL 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 279 LClGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHIcnhAFFKAMLFMCSgsiIHNLNDEQDIR 358
Cdd:MTH00197 141 IC-SVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYL---IYFVIMFMLFL---FLSKNNLSSLN 213
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 745999997 359 KMGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNInaWALTITLIATSMTAIY 423
Cdd:MTH00197 214 QQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNI--SLITFMLILSTCFSLY 276
ND2 MTH00160
NADH dehydrogenase subunit 2; Provisional
202-455 6.53e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214442 [Multi-domain]  Cd Length: 335  Bit Score: 39.04  E-value: 6.53e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 202 MFMLSYDPSMIPLIGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfhPLMENNKSIQTLMLcl 281
Cdd:MTH00160  78 NMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL----SYLINNNFIIIIII-- 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 282 gaITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTMGINQPYLAFLHIcnhaffkaMLFMCSGSIIHNLNDEQ--DIRK 359
Cdd:MTH00160 152 --LSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFL--------IYSIISLSIILLFNKFNifFLNQ 221
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999997 360 MGGLFKSMPFTSSSLTIGSLALTGMPFLTGFYSKDLIIESANTSNINAWaLTITLIATSMTAIYSTRIIFYALLGQPRFT 439
Cdd:MTH00160 222 LFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFL-LFILIMSSLITLYFYLRISYSSLMLNYNKN 300
                        250
                 ....*....|....*.
gi 745999997 440 TSTPINENNPLLINSI 455
Cdd:MTH00160 301 KWNLKKKKNKFSLILN 316
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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