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Conserved domains on  [gi|745999854|ref|YP_009114660|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Megaladapis edwardsi]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 21-115 2.27e-61

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 182.83  E-value: 2.27e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  21 AFWLPQLNIYTDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLISILAA 100
Cdd:MTH00106  21 AFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLAL 100

                         90
                 ....*....|....*
gi 745999854 101 GLAYEWLQKGLEWVE 115
Cdd:MTH00106 101 SLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 21-115 2.27e-61

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 182.83  E-value: 2.27e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  21 AFWLPQLNIYTDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLISILAA 100
Cdd:MTH00106  21 AFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLAL 100

                         90
                 ....*....|....*
gi 745999854 101 GLAYEWLQKGLEWVE 115
Cdd:MTH00106 101 SLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
21-112 1.87e-28

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 99.04  E-value: 1.87e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854   21 AFWLPQLNIYTDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTTSPKLT-LMVALTLISILA 99
Cdd:pfam00507   4 SRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIAILL 81

                          90
                  ....*....|...
gi 745999854  100 AGLAYEWLQKGLE 112
Cdd:pfam00507  82 VGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 33-113 1.45e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 79.78  E-value: 1.45e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  33 KYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWA-SQTTSPKLTLMVALTLISILAAGLAYEWLQKGL 111
Cdd:COG0838   38 KLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAvVFRELGWFGLIEMLVFIAILLVGLIYAWKKGAL 115


                 ..
gi 745999854 112 EW 113
Cdd:COG0838  116 EW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 21-115 2.27e-61

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 182.83  E-value: 2.27e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  21 AFWLPQLNIYTDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLISILAA 100
Cdd:MTH00106  21 AFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLAL 100

                         90
                 ....*....|....*
gi 745999854 101 GLAYEWLQKGLEWVE 115
Cdd:MTH00106 101 SLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 21-115 1.13e-45

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 143.52  E-value: 1.13e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  21 AFWLPQLNIYTDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLISILAA 100
Cdd:MTH00136  22 SFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILLTL 101

                         90
                 ....*....|....*
gi 745999854 101 GLAYEWLQKGLEWVE 115
Cdd:MTH00136 102 GLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 20-115 2.22e-43

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 137.43  E-value: 2.22e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  20 MAFWLPQLNIYTDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLISILA 99
Cdd:MTH00069  19 ISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTPTNTLFWSTLILILLT 98

                         90
                 ....*....|....*.
gi 745999854 100 AGLAYEWLQKGLEWVE 115
Cdd:MTH00069  99 LGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 22-113 3.10e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 131.93  E-value: 3.10e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  22 FWLPQLNIYTDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLISILAAG 101
Cdd:MTH00113  22 FWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWATIILTLLTLG 101

                         90
                 ....*....|..
gi 745999854 102 LAYEWLQKGLEW 113
Cdd:MTH00113 102 LIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 20-115 7.36e-36

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 118.55  E-value: 7.36e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  20 MAFWLPQLNIYTDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLISILA 99
Cdd:MTH00042  21 AGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILT 100

                         90
                 ....*....|....*.
gi 745999854 100 AGLAYEWLQKGLEWVE 115
Cdd:MTH00042 101 IGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 20-113 7.59e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 110.76  E-value: 7.59e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  20 MAFWLPQLNIYTDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPklTLMVALTLISILA 99
Cdd:MTH00203  21 IAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSL--SLLLAFLFLILLT 98

                         90
                 ....*....|....
gi 745999854 100 AGLAYEWLQKGLEW 113
Cdd:MTH00203  99 LGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
21-112 1.87e-28

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 99.04  E-value: 1.87e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854   21 AFWLPQLNIYTDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTTSPKLT-LMVALTLISILA 99
Cdd:pfam00507   4 SRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIAILL 81

                          90
                  ....*....|...
gi 745999854  100 AGLAYEWLQKGLE 112
Cdd:pfam00507  82 VGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 33-113 3.07e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 94.07  E-value: 3.07e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  33 KYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLISILAAGLAYEWLQKGLE 112
Cdd:MTH00161  33 KSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQGALE 112


                 .
gi 745999854 113 W 113
Cdd:MTH00161 113 W 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 32-115 3.67e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 88.76  E-value: 3.67e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  32 DKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLISILAAGLAYEWLQKGL 111
Cdd:MTH00148  34 EKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLFIFLLILILGLFHEWNEGSL 113


                 ....
gi 745999854 112 EWVE 115
Cdd:MTH00148 114 DWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 33-115 6.96e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 85.43  E-value: 6.96e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  33 KYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLISILAAGLAYEWLQKGLE 112
Cdd:MTH00202  35 KSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLD 114


                 ...
gi 745999854 113 WVE 115
Cdd:MTH00202 115 WVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 32-113 1.65e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 82.21  E-value: 1.65e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  32 DKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLISILAAGLAYEWLQKGL 111
Cdd:MTH00012  34 EKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWREGSL 113


                 ..
gi 745999854 112 EW 113
Cdd:MTH00012 114 DW 115
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 33-113 1.45e-20

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 79.78  E-value: 1.45e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  33 KYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWA-SQTTSPKLTLMVALTLISILAAGLAYEWLQKGL 111
Cdd:COG0838   38 KLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAvVFRELGWFGLIEMLVFIAILLVGLIYAWKKGAL 115


                 ..
gi 745999854 112 EW 113
Cdd:COG0838  116 EW 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 31-113 1.51e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 77.06  E-value: 1.51e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  31 TDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPKLTLMVALTLIsILAAGLAYEWLQKG 110
Cdd:MTH00055  36 SEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLI-ILTIGLIYEWVKGG 114


                 ...
gi 745999854 111 LEW 113
Cdd:MTH00055 115 LEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 32-113 1.44e-18

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 74.52  E-value: 1.44e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  32 DKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWA-SQTTSPKLTLMVALTLISILAAGLAYEWLQKG 110
Cdd:PRK06602  40 EKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAvSFREIGWLGFVEAMIFILVLLVGLVYLWRKGA 117


                 ...
gi 745999854 111 LEW 113
Cdd:PRK06602 118 LDW 120
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 32-113 1.28e-17

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 72.02  E-value: 1.28e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  32 DKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTSPkLTLMVALTLISILAAGLAYEWLQKGL 111
Cdd:MTH00018  32 EKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAP-FGFWTMVGFLFILTLGLIYEWIKGGL 110


                 ..
gi 745999854 112 EW 113
Cdd:MTH00018 111 EW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 31-113 1.84e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 69.58  E-value: 1.84e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  31 TDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTTSPKL-TLMVALTLISILAAGLAYEWLQK 109
Cdd:MTH00030  41 SEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLNLfSFWIVYTFLIVLAIGLAYEWIKG 118


                 ....
gi 745999854 110 GLEW 113
Cdd:MTH00030 119 GLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-113 3.56e-09

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 50.44  E-value: 3.56e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  33 KYSPYECGFDPMSSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWASQTTSPKLTLMVALTL-ISILAAGLAYEWLQK 109
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALfMLTVFVAYAYVWRRG 114


                 ....
gi 745999854 110 GLEW 113
Cdd:PRK07928 115 GLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 32-113 2.24e-08

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 48.44  E-value: 2.24e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  32 DKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTTSPKLTLMV-ALTLISILAAGLAYEWLQKG 110
Cdd:CHL00022  39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVSAFIeALIFVLILIVGLVYAWRKGA 116


                 ...
gi 745999854 111 LEW 113
Cdd:CHL00022 117 LEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
33-113 1.33e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 46.27  E-value: 1.33e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  33 KYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPlpWASQTTSPKLTLMVA-LTLISILAAGLAYEWLQKGL 111
Cdd:PRK07756  42 KATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGLFALIEmLIFVVMLLVGLAYAWKKKVL 119


                 ..
gi 745999854 112 EW 113
Cdd:PRK07756 120 QW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
33-113 1.25e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 41.19  E-value: 1.25e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  33 KYSPYECGFDPMSSARlPFSMKFFLVAITFLLFDLEIALLlpLPWASQTTSPKLTLMVALTL-ISILAAGLAYEWLQKGL 111
Cdd:PRK08489  47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFKLLGLFGLIEMLLfIVLLTIGFIYAWKKGAL 123


                 ..
gi 745999854 112 EW 113
Cdd:PRK08489 124 EW 125
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 28-114 1.95e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 40.26  E-value: 1.95e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999854  28 NIYTDKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLpwasqTTSPKLTLMVALTLISILAAGLAYEWL 107
Cdd:MTH00092  29 KFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL-----LVSDFSSLISFFMLMIFIFFGFYMEWW 103


                 ....*..
gi 745999854 108 QKGLEWV 114
Cdd:MTH00092 104 YGKLIWV 110
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-76 3.92e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.88  E-value: 3.92e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 745999854  34 YSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060  38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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