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Conserved domains on  [gi|745999812|ref|YP_009114621|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Varecia variegata]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 8.45e-69

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 201.71  E-value: 8.45e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   1 MNLPLTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 745999812  81 TTNLKLTLTMALILIFTLAAGLAYEWLQKGLEWTE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 8.45e-69

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 201.71  E-value: 8.45e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   1 MNLPLTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 745999812  81 TTNLKLTLTMALILIFTLAAGLAYEWLQKGLEWTE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 6.64e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 105.20  E-value: 6.64e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   18 VTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTTNLKLT-LTMALILIF 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 745999812   97 TLAAGLAYEWLQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 4.93e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.94  E-value: 4.93e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   3 LPLTLMINITLTLILVT--IAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:COG0838    6 LPILIFLLVALGLALAMllLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVV 83

                         90       100       110
                 ....*....|....*....|....*....|....
gi 745999812  81 TTNLKLT-LTMALILIFTLAAGLAYEWLQKGLEW 113
Cdd:COG0838   84 FRELGWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 8.45e-69

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 201.71  E-value: 8.45e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   1 MNLPLTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 745999812  81 TTNLKLTLTMALILIFTLAAGLAYEWLQKGLEWTE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 7.03e-49

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 151.61  E-value: 7.03e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   1 MNLPLT-LMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79
Cdd:MTH00136   1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 745999812  80 QTTNLKLTLTMALILIFTLAAGLAYEWLQKGLEWTE 115
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-115 5.71e-45

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 141.67  E-value: 5.71e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   3 LPLTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTT 82
Cdd:MTH00069   2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 745999812  83 NLKLTLTMALILIFTLAAGLAYEWLQKGLEWTE 115
Cdd:MTH00069  82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-114 2.12e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 135.01  E-value: 2.12e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   1 MNLPLTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 745999812  81 TTNLKLTLTMALILIFTLAAGLAYEWLQKGLEWT 114
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 1.24e-37

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 123.17  E-value: 1.24e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   1 MNLPLTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00042   2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 745999812  81 TTNLKLTLTMALILIFTLAAGLAYEWLQKGLEWTE 115
Cdd:MTH00042  82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 5-113 1.55e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 112.30  E-value: 1.55e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   5 LTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNl 84
Cdd:MTH00203   6 LFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSS- 84

                         90       100
                 ....*....|....*....|....*....
gi 745999812  85 kLTLTMALILIFTLAAGLAYEWLQKGLEW 113
Cdd:MTH00203  85 -LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 6.64e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 105.20  E-value: 6.64e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   18 VTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTTNLKLT-LTMALILIF 96
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFgFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 745999812   97 TLAAGLAYEWLQKGLE 112
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 5-115 8.41e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 98.01  E-value: 8.41e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   5 LTLMINITLTLILVTIAFWLPQLNMY-TEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTN 83
Cdd:MTH00148   6 LSLLFALILSPVLLLLGLVLSKRSYSdREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSF 85

                         90       100       110
                 ....*....|....*....|....*....|..
gi 745999812  84 LKLTLTMALILIFTLAAGLAYEWLQKGLEWTE 115
Cdd:MTH00148  86 SVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 5-113 9.56e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 95.23  E-value: 9.56e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   5 LTLMINITLTLILVTIAFWL-PQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTN 83
Cdd:MTH00161   4 IILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSN 83

                         90       100       110
                 ....*....|....*....|....*....|
gi 745999812  84 LKLTLTMALILIFTLAAGLAYEWLQKGLEW 113
Cdd:MTH00161  84 MMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 7-113 1.84e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 91.98  E-value: 1.84e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   7 LMINITLTLILVTIAFWLP-QLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLK 85
Cdd:MTH00202   8 SILSILISSLLFLVSWMLSfRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSK 87

                         90       100
                 ....*....|....*....|....*...
gi 745999812  86 LTLTMALILIFTLAAGLAYEWLQKGLEW 113
Cdd:MTH00202  88 GGLLGGTIFLLILIGGLIHEWKEGSLDW 115
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-113 4.93e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.94  E-value: 4.93e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   3 LPLTLMINITLTLILVT--IAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQ 80
Cdd:COG0838    6 LPILIFLLVALGLALAMllLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVV 83

                         90       100       110
                 ....*....|....*....|....*....|....
gi 745999812  81 TTNLKLT-LTMALILIFTLAAGLAYEWLQKGLEW 113
Cdd:COG0838   84 FRELGWFgLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 5-114 2.57e-22

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 84.14  E-value: 2.57e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   5 LTLMINITLTLILVTIAFWLPQLNMYT-EKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTN 83
Cdd:MTH00012   6 IPMMISLILPPLVLGAAWVLAARSTADrEKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTST 85

                         90       100       110
                 ....*....|....*....|....*....|.
gi 745999812  84 LKLTLTMALILIFTLAAGLAYEWLQKGLEWT 114
Cdd:MTH00012  86 SKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 5-113 7.70e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 82.84  E-value: 7.70e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   5 LTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNL 84
Cdd:MTH00055  10 ILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGL 89

                         90       100
                 ....*....|....*....|....*....
gi 745999812  85 KLTLTMALILIFtLAAGLAYEWLQKGLEW 113
Cdd:MTH00055  90 FGFWVMYLFLII-LTIGLIYEWVKGGLEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 7-114 4.01e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 78.75  E-value: 4.01e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   7 LMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTTNLKL 86
Cdd:PRK06602  15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGW 92

                         90       100
                 ....*....|....*....|....*....
gi 745999812  87 T-LTMALILIFTLAAGLAYEWLQKGLEWT 114
Cdd:PRK06602  93 LgFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-113 4.43e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 75.87  E-value: 4.43e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   1 MNLPLTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80
Cdd:MTH00018   1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 745999812  81 TTNLKLTLTMALILiFTLAAGLAYEWLQKGLEW 113
Cdd:MTH00018  81 QIAPFGFWTMVGFL-FILTLGLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 8-113 1.06e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 69.96  E-value: 1.06e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   8 MINITLTLILVTIAFWLPQLNMY-----TEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTT 82
Cdd:MTH00030  13 LLGVGIILLLVSISFTLGNSRIGltkpdSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQL 92

                         90       100       110
                 ....*....|....*....|....*....|.
gi 745999812  83 NLkLTLTMALILIFTLAAGLAYEWLQKGLEW 113
Cdd:MTH00030  93 NL-FSFWIVYTFLIVLAIGLAYEWIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 7-114 8.48e-11

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 54.61  E-value: 8.48e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   7 LMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLlpLPWASQTTNLKL 86
Cdd:CHL00022  14 LIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGV 91

                         90       100
                 ....*....|....*....|....*....
gi 745999812  87 TLTM-ALILIFTLAAGLAYEWLQKGLEWT 114
Cdd:CHL00022  92 SAFIeALIFVLILIVGLVYAWRKGALEWS 120
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-114 1.28e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 54.29  E-value: 1.28e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812  33 KYSPYECGFDPMSSARLP--FSMKFFLVAITFLLFDLEIALLLPlpWASQTTNLKLTLTMALIL-IFTLAAGLAYEWLQK 109
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDALGVFGLVEMALfMLTVFVAYAYVWRRG 114


                 ....*
gi 745999812 110 GLEWT 114
Cdd:PRK07928 115 GLEWD 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
7-113 2.73e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 53.59  E-value: 2.73e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   7 LMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPlpWASQTTNLKL 86
Cdd:PRK07756  16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYDKLGL 93

                         90       100
                 ....*....|....*....|....*...
gi 745999812  87 -TLTMALILIFTLAAGLAYEWLQKGLEW 113
Cdd:PRK07756  94 fALIEMLIFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-114 8.22e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 44.11  E-value: 8.22e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   1 MNLPLTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLpwasq 80
Cdd:MTH00092   2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGL----- 76

                         90       100       110
                 ....*....|....*....|....*....|....
gi 745999812  81 TTNLKLTLTMALILIFTLAAGLAYEWLQKGLEWT 114
Cdd:MTH00092  77 LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIWV 110
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
3-113 1.76e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 43.50  E-value: 1.76e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   3 LPLTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARlPFSMKFFLVAITFLLFDLEIALLlpLPWASQTT 82
Cdd:PRK08489  17 LVLTFVAFFLTTRLARFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDFK 93

                         90       100       110
                 ....*....|....*....|....*....|..
gi 745999812  83 NLKL-TLTMALILIFTLAAGLAYEWLQKGLEW 113
Cdd:PRK08489  94 LLGLfGLIEMLLFIVLLTIGFIYAWKKGALEW 125
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-76 6.95e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.11  E-value: 6.95e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 745999812  34 YSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLP 76
Cdd:MTH00060  38 VSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
PRK06073 PRK06073
NADH dehydrogenase subunit A; Validated
 5-100 5.94e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 235690  Cd Length: 124  Bit Score: 33.81  E-value: 5.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745999812   5 LTLMINITLTLILVTIAFWLPQLNMYTEKYSPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNL 84
Cdd:PRK06073  12 LVIVLGLAAGVGTYKLLKLILPSKPTPLKVSRYEAGNPPTGPAKLWLPMQYYGYLLLFLTLEPIVVLLLLIAFAPYYTFR 91

                         90
                 ....*....|....*.
gi 745999812  85 KLTLTMALILIFTLAA 100
Cdd:PRK06073  92 DLLLLIVVALVLMYPV 107
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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