|
Name |
Accession |
Description |
Interval |
E-value |
| Rabaptin |
pfam03528 |
Rabaptin; |
100-583 |
0e+00 |
|
Rabaptin;
Pssm-ID: 367545 [Multi-domain] Cd Length: 486 Bit Score: 767.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 100 VSLQQRVAELEKINAEFLRAKQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAI 179
Cdd:pfam03528 4 EDLQQRVAELEKENAEFYRLKQQLEAEFNQKRAKFKELYLAKEEDLKRQNAVLQEAQVELDALQNQLALARAEMENIKAV 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 180 ATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLE 259
Cdd:pfam03528 84 ATVSENTKQEAIDEVKSQWQEEVASLQAIMKETVREYEVQFHRRLEQERAQWNQYRESAEREIADLRRRLSEGQEEENLE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 260 NEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQED 339
Cdd:pfam03528 164 DEMKKAQEDAEKLRSVVMPMEKEIAALKAKLTEAEDKIKELEASKMKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQED 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 340 AEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLSK 419
Cdd:pfam03528 244 AEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMESVLTSEQLRQVEEIKKKDQEEHKRARTHK 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 420 RKDHKKTDVEEEVKIPVVCALTHEESSAQLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKPDnDVFKDGLRRAQSTDSL 499
Cdd:pfam03528 324 EKETLKSDREHTVSIHAVFSPAGVETSAPLSNVEEQINSAHGSVHSLDTDVVLGAGDSFNKQE-DPFKEGLRRAQSTDSL 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 500 GTSGSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVTENFDTASLGSLQMPSGFMLTKDQERAIKAMTPEQEETASLLS 579
Cdd:pfam03528 403 GSSSSLQHKFLGHNQKAKSAGNLDESDFGPLVGADSVSENFDTSSLGSLKMPSGFMLTKDQEKAIKAMTPEQEETASLLS 482
|
....
gi 742155991 580 SVTQ 583
Cdd:pfam03528 483 SVTQ 486
|
|
| Rab5-bind |
pfam09311 |
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow ... |
621-927 |
3.53e-125 |
|
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow for binding to the GTPase Rab5. This interaction is necessary and sufficient for Rab5-dependent recruitment of Rabaptin5 to early endosomal membranes.
Pssm-ID: 462752 [Multi-domain] Cd Length: 307 Bit Score: 381.62 E-value: 3.53e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 621 CDMCSNYEKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEDSSHQISALVLRAQASEILLEE 700
Cdd:pfam09311 1 CDMCSNYEKQLQAIQEQEAETRDQVKKLQEMLRQANDQLEKTMKDKKELEDKMNQLSEETSNQVSTLAKRNQKSETLLDE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 701 LQQGFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFILPDTMEALRELVLKYRENIVNVR 780
Cdd:pfam09311 81 LQQAFSQAKRNFQDQLAVLMDSREQVSDELVRLQKDNESLQGKHSLHVSLQQAEKFDMPDTVQELQELVLKYREELIEVR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 781 TAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESL 860
Cdd:pfam09311 161 TAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQAEIENCKEEIASISSLKVELERIKAEKEQLENGLTEKIRQLEDL 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 742155991 861 QEMKMTLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQAD 927
Cdd:pfam09311 241 QTTKGSLETQLKKETNEKAAVEQLVFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQAD 307
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
125-926 |
8.49e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 88.96 E-value: 8.49e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 125 QEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAiATVSENTKQEAIDEVKRQWREEVAS 204
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQK-ELYALANEISRLEQQKQILRERLAN 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 205 LQAVMKETVRDYEHQFH--LRLEQERTQWAQYRESAEREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEK 281
Cdd:TIGR02168 314 LERQLEELEAQLEELESklDELAEELAELEEKLEELKEELESLEAELEELEAElEELESRLEELEEQLETLRSKVAQLEL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 282 EIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCrtdLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQH 361
Cdd:TIGR02168 394 QIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL---EEAELKELQAELEELEEELEELQEELERLEEALEELREEL 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 362 NQLKHTWQKANDQFLESQRLLmRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLSkrkDHKKTDVEEEVKIPVVC--- 438
Cdd:TIGR02168 471 EEAEQALDAAERELAQLQARL-DSLERLQENLEGFSEGVKALLKNQSGLSGILGVLS---ELISVDEGYEAAIEAALggr 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 439 --ALTHEESSAQLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSkpdndvfkDGLRRAQSTDSLGTSGSLQSKALGYnyka 516
Cdd:TIGR02168 547 lqAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGN--------DREILKNIEGFLGVAKDLVKFDPKL---- 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 517 ksagnldESDFGPLVGADSVTENFDTASLGSLQMPSGFML-TKDQERAIK--AMTPEQEETASLLSSVtqgmesayvsps 593
Cdd:TIGR02168 615 -------RKALSYLLGGVLVVDDLDNALELAKKLRPGYRIvTLDGDLVRPggVITGGSAKTNSSILER------------ 675
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 594 gyrlvsetewnllQKEIHNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFI 673
Cdd:TIGR02168 676 -------------RREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEV 742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 674 KQSTEDSSHQISALVLRAQASEILLEELQQGFSQAKRdVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHS-LHVSLQQ 752
Cdd:TIGR02168 743 EQLEERIAQLSKELTELEAEIEELEERLEEAEEELAE-AEAEIEELEAQIEQLKEELKALREALDELRAELTlLNEEAAN 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 753 AEDfilpDTMEALRELVLKYRENIVNVRTAadhmeEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSL 832
Cdd:TIGR02168 822 LRE----RLESLERRIAATERRLEDLEEQI-----EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALL 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 833 KAELERIKVEKGQLESTLREKSQQLESLQEMKMTLEEQLKKetaAKVTVEQLmfeEKNKAQRLQTELDVSEQVQRDFVKL 912
Cdd:TIGR02168 893 RSELEELSEELRELESKRSELRRELEELREKLAQLELRLEG---LEVRIDNL---QERLSEEYSLTLEEAEALENKIEDD 966
|
810
....*....|....
gi 742155991 913 SQTLQVQLERIRQA 926
Cdd:TIGR02168 967 EEEARRRLKRLENK 980
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
222-930 |
3.87e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.49 E-value: 3.87e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 222 LRLEQERTQWAQYRESAEREIadlrrrlsegQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE 301
Cdd:TIGR02168 232 LRLEELREELEELQEELKEAE----------EELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 302 ASKV-------------KELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTW 368
Cdd:TIGR02168 302 QQKQilrerlanlerqlEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 369 QKAND---QFLESQRLLMRDMQRMEIVLTS-----EQLRQVEELKKKDQEEDEQQRLSKRKDHKKTDVEEEVKIPVVCAL 440
Cdd:TIGR02168 382 ETLRSkvaQLELQIASLNNEIERLEARLERledrrERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEE 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 441 THEESSAQLSNEEEHLDSTHGSVHSLDADL-----LLPSGDPFSKPDNDVFKDGLRRAQSTDSLGTSGSLQSK------- 508
Cdd:TIGR02168 462 ALEELREELEEAEQALDAAERELAQLQARLdslerLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGyeaaiea 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 509 ALGYNY---------KAKSAGN-LDESDFGPLV--GADSVTENFDTASLG-SLQMPSGFMLTKDqeRAIKAMTPEQEETA 575
Cdd:TIGR02168 542 ALGGRLqavvvenlnAAKKAIAfLKQNELGRVTflPLDSIKGTEIQGNDReILKNIEGFLGVAK--DLVKFDPKLRKALS 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 576 SLLS------SVTQGMESAYVSPSGYRLVSE------TEWNLLQKEIHNAGNKLGRRCDMcSNYEKQLQGIQIQEAETRD 643
Cdd:TIGR02168 620 YLLGgvlvvdDLDNALELAKKLRPGYRIVTLdgdlvrPGGVITGGSAKTNSSILERRREI-EELEEKIEELEEKIAELEK 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 644 QVKKLQVMLRQANDQLEKTMKDKQELedfikqstEDSSHQISALVLRAQASEILLEELQQGFSQAKRDVQEQMAVLMQSR 723
Cdd:TIGR02168 699 ALAELRKELEELEEELEQLRKELEEL--------SRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERL 770
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 724 EQVSEELVRLQKDNDSLQgkhslhvslqqaedfilpDTMEALRELVLKYRENIVNVRTAADHMEEKLkAEILFLKEQIQA 803
Cdd:TIGR02168 771 EEAEEELAEAEAEIEELE------------------AQIEQLKEELKALREALDELRAELTLLNEEA-ANLRERLESLER 831
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 804 EQCLKENLEETLQLEIENCKEEIAsisSLKAELERIKVEKGQLESTLREKSQQLESLQEMKMTLEEQLKKETAAKVTVEQ 883
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEELSEDIE---SLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELES 908
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 742155991 884 LMFEEKNKAQRLQTELdvsEQVQRDFVKLSQTLQVQLERIRQADSLE 930
Cdd:TIGR02168 909 KRSELRRELEELREKL---AQLELRLEGLEVRIDNLQERLSEEYSLT 952
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
628-916 |
5.70e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.54 E-value: 5.70e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 628 EKQLQGIQIQEAetRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQsTEDSSHQISALVLRAQASEILLEELQQGFSQ 707
Cdd:TIGR02168 226 ELALLVLRLEEL--REELEELQEELKEAEEELEELTAELQELEEKLEE-LRLEVSELEEEIEELQKELYALANEISRLEQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 708 AKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKhslhVSLQQAEDFILPDTMEALRELVLKYRENIVNVRTAADHME 787
Cdd:TIGR02168 303 QKQILRERLANLERQLEELEAQLEELESKLDELAEE----LAELEEKLEELKEELESLEAELEELEAELEELESRLEELE 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 788 EKL---KAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKgqLESTLREKSQQLESLQEMK 864
Cdd:TIGR02168 379 EQLetlRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKE--LQAELEELEEELEELQEEL 456
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 742155991 865 MTLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTL 916
Cdd:TIGR02168 457 ERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGV 508
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
102-430 |
9.65e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.77 E-value: 9.65e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 102 LQQRVAELEKINAEFLRAKQQLEQEFNQKRAKFKELYL---AKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKA 178
Cdd:TIGR02168 689 LEEKIAELEKALAELRKELEELEEELEQLRKELEELSRqisALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEE 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 179 IATVSENTKQEAIDEVKRQwREEVASLQAVMKETVRDYE--HQFHLRLEQERTQWAQYRESAEREIADLRRRLsegqeeE 256
Cdd:TIGR02168 769 RLEEAEEELAEAEAEIEEL-EAQIEQLKEELKALREALDelRAELTLLNEEAANLRERLESLERRIAATERRL------E 841
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 257 NLENEMKKAQEDAEKLrsvvmpmEKEIAALKDKLTEAEDKIKELEASKvKELNHYLEAEKSCRTDLEMYVAVLNTQKSVL 336
Cdd:TIGR02168 842 DLEEQIEELSEDIESL-------AAEIEELEELIEELESELEALLNER-ASLEEALALLRSELEELSEELRELESKRSEL 913
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 337 QEDAEKLRKELHEVCHLLEQERQQHNQLKhtwqkanDQFLESQRLLMRDMQRMEIVLTSEQL---RQVEELKKKDQE--- 410
Cdd:TIGR02168 914 RRELEELREKLAQLELRLEGLEVRIDNLQ-------ERLSEEYSLTLEEAEALENKIEDDEEearRRLKRLENKIKElgp 986
|
330 340
....*....|....*....|....*
gi 742155991 411 -----EDEQQRLSKRKDHKKTDVEE 430
Cdd:TIGR02168 987 vnlaaIEEYEELKERYDFLTAQKED 1011
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
628-940 |
1.40e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 62.26 E-value: 1.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 628 EKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEDsSHQISALVLRAQASEILLEELQQGFSQ 707
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAE-EYELLAELARLEQDIARLEERRRELEE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 708 AKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGK-HSLHVSLQQAEdfilpdtmEALRELVLKYRENIVNVRTAADHM 786
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEElEEAEAELAEAE--------EALLEAEAELAEAEEELEELAEEL 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 787 EEKLKAEILFLKEQIQAEQclkenLEETLQLEIENCKEEIAsisSLKAELERIKVEKGQLESTLREKSQQLESLQEMKMT 866
Cdd:COG1196 389 LEALRAAAELAAQLEELEE-----AEEALLERLERLEEELE---ELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEA 460
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 742155991 867 LEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTK 940
Cdd:COG1196 461 LLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEA 534
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
102-371 |
2.42e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.49 E-value: 2.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 102 LQQRVAELEKINAEFLRAKQQ---LEQEFNQKRAKFKELylakEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKA 178
Cdd:COG1196 255 LEELEAELAELEAELEELRLEleeLELELEEAQAEEYEL----LAELARLEQDIARLEERRRELEERLEELEEELAELEE 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 179 iatvsentKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQwAQYRESAEREIADLRRRLSEGQEEENL 258
Cdd:COG1196 331 --------ELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL-AEAEEELEELAEELLEALRAAAELAAQ 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 259 ENEMKKAQEDAEKLRSVvmpMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQE 338
Cdd:COG1196 402 LEELEEAEEALLERLER---LEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAA 478
|
250 260 270
....*....|....*....|....*....|....*
gi 742155991 339 DAEKLRKELHEVC--HLLEQERQQHNQLKHTWQKA 371
Cdd:COG1196 479 LAELLEELAEAAArlLLLLEAEADYEGFLEGVKAA 513
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
101-410 |
5.96e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.00 E-value: 5.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 101 SLQQRVAELEKINAEFLRAKQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQ---AAQDDLGHLRTQLWEAQAEMENIK 177
Cdd:TIGR02169 678 RLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQeeeKLKERLEELEEDLSSLEQEIENVK 757
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 178 AiatvsentKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRL-SEGQEEE 256
Cdd:TIGR02169 758 S--------ELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLnRLTLEKE 829
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 257 NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEAsKVKELNHYLEAEKSCRTDLEmyvavlnTQKSVL 336
Cdd:TIGR02169 830 YLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEA-ALRDLESRLGDLKKERDELE-------AQLREL 901
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 742155991 337 QEDAEKLRKElhevchlLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLrqVEELKKKDQE 410
Cdd:TIGR02169 902 ERKIEELEAQ-------IEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDV--QAELQRVEEE 966
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
628-931 |
7.46e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.48 E-value: 7.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 628 EKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEDSSH---QISALVLRAQASEILLEELQQG 704
Cdd:COG1196 210 EKAERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAEleaELEELRLELEELELELEEAQAE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 705 FSQAKRDV---QEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFILPDTMEALRELVLKYRENIVNVRT 781
Cdd:COG1196 290 EYELLAELarlEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 782 AADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEienckeeiASISSLKAELERIKVEKGQLESTLREKSQQLESLQ 861
Cdd:COG1196 370 AEAELAEAEEELEELAEELLEALRAAAELAAQLEELE--------EAEEALLERLERLEEELEELEEALAELEEEEEEEE 441
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 862 EMKMTLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDvseQVQRDFVKLSQTLQVQLERIRQADSLER 931
Cdd:COG1196 442 EALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALA---ELLEELAEAAARLLLLLEAEADYEGFLE 508
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
102-404 |
1.19e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.71 E-value: 1.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 102 LQQRVAELEKINAEFLRAKQQLEQEFNQKRAKFKELYLAKEEdLKRQNAVLQAAQDDLGHLRTQLweaqAEMENIKAIAT 181
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLE-LEELELELEEAQAEEYELLAEL----ARLEQDIARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 182 VSENTKQEAIDEVKRQWREEVASLQAVmKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENE 261
Cdd:COG1196 309 ERRRELEERLEELEEELAELEEELEEL-EEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEE 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 262 MKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAE 341
Cdd:COG1196 388 LLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAE 467
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 742155991 342 KLRKElhevchllEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEEL 404
Cdd:COG1196 468 LLEEA--------ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGL 522
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
223-431 |
2.12e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.94 E-value: 2.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 223 RLEQERTQWAQYRESAEREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE 301
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLElEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 302 ASKVKELNHYLEAEKScrtdlemyVAVLNTQKSVLQEDAEKLRKELHEvchlLEQERQQHNQLKHTWQKANDQFLESQRL 381
Cdd:COG1196 323 EELAELEEELEELEEE--------LEELEEELEEAEEELEEAEAELAE----AEEALLEAEAELAEAEEELEELAEELLE 390
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 742155991 382 LMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLSKRKDHKKTDVEEE 431
Cdd:COG1196 391 ALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
639-880 |
4.15e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.23 E-value: 4.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 639 AETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEdsshQISALVLRAQASEILLEELQQGFSQAKRDVQEQMAV 718
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALER----RIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 719 LMQSREQVSEELVRLQKdndslQGKHSLHVSLQQAEDFILPDTMEALRELVLKYRENIVnvrtaadhmeEKLKAEILFLK 798
Cdd:COG4942 99 LEAQKEELAELLRALYR-----LGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQA----------EELRADLAELA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 799 EQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKMTLEEQLKKETAAK 878
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
..
gi 742155991 879 VT 880
Cdd:COG4942 244 PA 245
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
108-937 |
5.86e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 53.82 E-value: 5.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 108 ELEKINAEFLRAKQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTK 187
Cdd:pfam02463 184 NLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 188 QEAIDEVKRQWREEvaslQAVMKETVRDYEHQFHLRLEQERTqwaqyRESAEREIADLRRRLsegqeeENLENEMKKAQE 267
Cdd:pfam02463 264 EEKLAQVLKENKEE----EKEKKLQEEELKLLAKEEEELKSE-----LLKLERRKVDDEEKL------KESEKEKKKAEK 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 268 DAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMyvavLNTQKSVLQEDAEKLRKEL 347
Cdd:pfam02463 329 ELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESER----LSSAAKLKEEELELKSEEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 348 HEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLmrdmQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLSKRKDHKKTD 427
Cdd:pfam02463 405 KEAQLLLELARQLEDLLKEEKKEELEILEEEEESI----ELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLV 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 428 VEEEVKIPVVCALTHEESSAQLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKPDNDVFKDGLRRAQSTDSLGTSGSLQS 507
Cdd:pfam02463 481 KLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEV 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 508 KALGYNYKAKSAGNLDESDFGPLVGADSVTENFDTASLGSLQMPSGFMLTKDQERAIKAMTPEQEETASLLSSVTQGMES 587
Cdd:pfam02463 561 EERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKES 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 588 AYVSPSGYRLVSETEWNLLQKEIHNAGNKLGRRCDmcsNYEKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQ 667
Cdd:pfam02463 641 AKAKESGLRKGVSLEEGLAEKSEVKASLSELTKEL---LEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKL 717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 668 ELEDFIKQSTEDSSHQISALVLRAQASEILLEELQQGFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLh 747
Cdd:pfam02463 718 EAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKL- 796
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 748 vslqQAEDFILPDTMEALRELVLKYRENIVNVRTAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIA 827
Cdd:pfam02463 797 ----KAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQEL 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 828 SISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKMTLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQR 907
Cdd:pfam02463 873 LLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEE 952
|
810 820 830
....*....|....*....|....*....|
gi 742155991 908 DFVKLSQTLQVQLERIRQADSLERIRAILN 937
Cdd:pfam02463 953 NNKEEEEERNKRLLLAKEELGKVNLMAIEE 982
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
102-354 |
8.48e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.02 E-value: 8.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 102 LQQRVAELEKINAEFLRAKQQLEQEFNQKRAKFKELylakEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIAT 181
Cdd:COG1196 293 LLAELARLEQDIARLEERRRELEERLEELEEELAEL----EEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALL 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 182 VSENTKQEAIDEVKRQWREEVASLQAvmketvrdyEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENE 261
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRA---------AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEE 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 262 MKKAQEDAEKLRSVVmpmEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAE 341
Cdd:COG1196 440 EEEALEEAAEEEAEL---EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLL 516
|
250
....*....|...
gi 742155991 342 KLRKELHEVCHLL 354
Cdd:COG1196 517 AGLRGLAGAVAVL 529
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
628-928 |
1.13e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.76 E-value: 1.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 628 EKQLQGIQIQEAETRDQVKKLQvmlrQANDQLEKTMKDKQELEDFikqstEDSSHQISALVLRAQASEIL-----LEELQ 702
Cdd:TIGR02169 183 EENIERLDLIIDEKRQQLERLR----REREKAERYQALLKEKREY-----EGYELLKEKEALERQKEAIErqlasLEEEL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 703 QGFSQAKRDVQEQMAVLMQSREQVSEELVRLqKDNDSLQGK---HSLHVSLQQAEDFI--LPDTMEALRELVLKYRENIV 777
Cdd:TIGR02169 254 EKLTEEISELEKRLEEIEQLLEELNKKIKDL-GEEEQLRVKekiGELEAEIASLERSIaeKERELEDAEERLAKLEAEID 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 778 NVRTAADHMEEKLKAEILfLKEQIQAEQCLKENLEETLQLEIENCKEEIAS----ISSLKAELERIKVEKGQLESTLR-- 851
Cdd:TIGR02169 333 KLLAEIEELEREIEEERK-RRDKLTEEYAELKEELEDLRAELEEVDKEFAEtrdeLKDYREKLEKLKREINELKRELDrl 411
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 742155991 852 --EKSQQLESLQEMKMTLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS 928
Cdd:TIGR02169 412 qeELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQR 490
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
103-454 |
1.17e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.84 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 103 QQRVAELEKINAEFLRAKQQLEQEFNQKRaKFKELYLAKEEDLKRQNAVLQAAQDdlghlRTQLWEAQAEMENIKAIATV 182
Cdd:PTZ00121 1455 EAKKAEEAKKKAEEAKKADEAKKKAEEAK-KADEAKKKAEEAKKKADEAKKAAEA-----KKKADEAKKAEEAKKADEAK 1528
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 183 SENTKQEAiDEVKRQwrEEVASLQAVMKETvrdyehqfHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENEM 262
Cdd:PTZ00121 1529 KAEEAKKA-DEAKKA--EEKKKADELKKAE--------ELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEV 1597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 263 KKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVavlntQKSVLQEDAEK 342
Cdd:PTZ00121 1598 MKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKI-----KAAEEAKKAEE 1672
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 343 LRKELHEVCHLLEQERQQHNQLKHTWQkandqflESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLSKRKD 422
Cdd:PTZ00121 1673 DKKKAEEAKKAEEDEKKAAEALKKEAE-------EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKK 1745
|
330 340 350
....*....|....*....|....*....|..
gi 742155991 423 HKKTDVEEEVKIPVVCALTHEESSAQLSNEEE 454
Cdd:PTZ00121 1746 AEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEK 1777
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
196-471 |
2.49e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.48 E-value: 2.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 196 RQWREEVASLQAVMKETVRDYEhqfhlRLEQERTQWAQYRESAEREIADLRRRLSEGQEEEN-LENEMKKAQEDAEKLRS 274
Cdd:COG1196 235 RELEAELEELEAELEELEAELE-----ELEAELAELEAELEELRLELEELELELEEAQAEEYeLLAELARLEQDIARLEE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 275 VVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLL 354
Cdd:COG1196 310 RRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELL 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 355 EQERQQHNQlkhtwQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLSKRKDHKKTDvEEEVKI 434
Cdd:COG1196 390 EALRAAAEL-----AAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE-EEALLE 463
|
250 260 270
....*....|....*....|....*....|....*..
gi 742155991 435 PVVCALTHEESSAQLSNEEEHLDSTHGSVHSLDADLL 471
Cdd:COG1196 464 LLAELLEEAALLEAALAELLEELAEAAARLLLLLEAE 500
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
107-354 |
7.92e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 50.06 E-value: 7.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 107 AELEKINAEFLRAKQQLEQEFNQKRAKFKELylakeEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENT 186
Cdd:TIGR02168 810 AELTLLNEEAANLRERLESLERRIAATERRL-----EDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERAS 884
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 187 KQEAIDEVKRQWREEVASLQAVmkETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQ--EEENLENEMKK 264
Cdd:TIGR02168 885 LEEALALLRSELEELSEELREL--ESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYslTLEEAEALENK 962
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 265 AQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKvKELNHYLEAEKSCRTDLEMYVAVLNTQ-KSVLQEDAEKL 343
Cdd:TIGR02168 963 IEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERY-DFLTAQKEDLTEAKETLEEAIEEIDREaRERFKDTFDQV 1041
|
250
....*....|.
gi 742155991 344 RKELHEVCHLL 354
Cdd:TIGR02168 1042 NENFQRVFPKL 1052
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
104-872 |
8.32e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.07 E-value: 8.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 104 QRVAELEKINAEFLRAKQQLEQEFNQKRaKFKELYLAKEE-DLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATV 182
Cdd:TIGR02169 184 ENIERLDLIIDEKRQQLERLRREREKAE-RYQALLKEKREyEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 183 SENTKQEA---IDEVKRQWREEVASLQAVMKETVRDYEHQfhlrleqertqwaqyRESAEREIADLRRRLSEGQEEE-NL 258
Cdd:TIGR02169 263 LEKRLEEIeqlLEELNKKIKDLGEEEQLRVKEKIGELEAE---------------IASLERSIAEKERELEDAEERLaKL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 259 ENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA---SKVKELNHYLEAEKSCRTDLEMYVAVLN---TQ 332
Cdd:TIGR02169 328 EAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAeleEVDKEFAETRDELKDYREKLEKLKREINelkRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 333 KSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRdmqrmeivlTSEQLRQVEELKKKDQEEd 412
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQ---------LAADLSKYEQELYDLKEE- 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 413 eQQRLSKRKdhkkTDVEEEVKIPVVCALTHEESSAQLSNEEEHLDSTHGSVHSLDADLLlpsgdpfskpdndvfKDGLRR 492
Cdd:TIGR02169 478 -YDRVEKEL----SKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLG---------------SVGERY 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 493 AQSTDSLGtSGSLQSKALGYNYKAKSA------GNLDESDFGPLvgadsvTENFDTASLGSLQMPSGFMltkdqERAIKA 566
Cdd:TIGR02169 538 ATAIEVAA-GNRLNNVVVEDDAVAKEAiellkrRKAGRATFLPL------NKMRDERRDLSILSEDGVI-----GFAVDL 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 567 MTPEQEETASLL-----SSVTQGMESAYVSPSGYRLVSeTEWNLLQKEIHNAGNklgrrcdmcSNYEKQLQGIQIQEaet 641
Cdd:TIGR02169 606 VEFDPKYEPAFKyvfgdTLVVEDIEAARRLMGKYRMVT-LEGELFEKSGAMTGG---------SRAPRGGILFSRSE--- 672
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 642 RDQVKKLQVMLRQANDQLEKTMKDKQELE---DFIKQSTEDSSHQISALVLRAQaseiLLEELQQGFSQAKRDVQEQMAV 718
Cdd:TIGR02169 673 PAELQRLRERLEGLKRELSSLQSELRRIEnrlDELSQELSDASRKIGEIEKEIE----QLEQEEEKLKERLEELEEDLSS 748
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 719 LMQSREQVSEELVRLQKDNDSLQGK-HSLHVSLQQAEDFILPDTMEALRELVLKYRENIVNVRTAADHMEEKLKA----- 792
Cdd:TIGR02169 749 LEQEIENVKSELKELEARIEELEEDlHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRltlek 828
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 793 ------------EILFLKEQIQAEQCLKENLE---ETLQLEIENCKEEI-----------ASISSLKAELERIKVEKGQL 846
Cdd:TIGR02169 829 eylekeiqelqeQRIDLKEQIKSIEKEIENLNgkkEELEEELEELEAALrdlesrlgdlkKERDELEAQLRELERKIEEL 908
|
810 820
....*....|....*....|....*.
gi 742155991 847 ESTLREKSQQLESLQEMKMTLEEQLK 872
Cdd:TIGR02169 909 EAQIEKKRKRLSELKAKLEALEEELS 934
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
639-947 |
1.24e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.16 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 639 AETRDQVKKLQvmlRQANdQLEKTMKDKQELEDFIKQSTedsSHQISALVLRAQASEILLEELQQGFSQAKRDVQEQMAV 718
Cdd:COG1196 196 GELERQLEPLE---RQAE-KAERYRELKEELKELEAELL---LLKLRELEAELEELEAELEELEAELEELEAELAELEAE 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 719 LMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFILPDTMEALRELVLKYREnivnvRTAADHMEEKLKAEILFLK 798
Cdd:COG1196 269 LEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEE-----LAELEEELEELEEELEELE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 799 EQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKMTLEEQLKKETAAK 878
Cdd:COG1196 344 EELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEEL 423
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 879 VTVE-QLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKLTDINQL 947
Cdd:COG1196 424 EELEeALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARL 493
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
101-302 |
2.11e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.76 E-value: 2.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 101 SLQQRVAELEKINAEFLRAKQQLE---------QEFNQKRAKFKEL-YLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQ 170
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQIEllepirelaERYAAARERLAELeYLRAALRLWFAQRRLELLEAELEELRAELARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 171 AEMENIKAiatvSENTKQEAIDEVKRQWRE----EVASLQAVMKetvrdyehqfhlRLEQERTQWAQYRESAEREIADLr 246
Cdd:COG4913 309 AELERLEA----RLDALREELDELEAQIRGnggdRLEQLEREIE------------RLERELEERERRRARLEALLAAL- 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 742155991 247 rRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA 302
Cdd:COG4913 372 -GLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEA 426
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
101-405 |
2.25e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.58 E-value: 2.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 101 SLQQRVAELEKINAEFLRAKQQLEQEFNQKRAKFKELYLAKE-EDLKRQNavLQAAQDDLghlrtqlweaqaEMENIKAI 179
Cdd:pfam15921 573 NMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDkKDAKIRE--LEARVSDL------------ELEKVKLV 638
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 180 ATVSENTKQ-EAIDEVKRQWREEVASLQAVMKETVRDYehqfhlrlEQERTQWAQYRESAEREIADLRRRLSEGQEE-EN 257
Cdd:pfam15921 639 NAGSERLRAvKDIKQERDQLLNEVKTSRNELNSLSEDY--------EVLKRNFRNKSEEMETTTNKLKMQLKSAQSElEQ 710
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 258 LENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA--SKVKELNHYLEAEKScrtDLEMYVAVLNTQKSV 335
Cdd:pfam15921 711 TRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEamTNANKEKHFLKEEKN---KLSQELSTVATEKNK 787
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 336 LQEDAEKLRKELHEVchlleqeRQQHNQLKHTWQKANDQFLESQRLLMRDMQRmEIVLTSEQLRQVEELK 405
Cdd:pfam15921 788 MAGELEVLRSQERRL-------KEKVANMEVALDKASLQFAECQDIIQRQEQE-SVRLKLQHTLDVKELQ 849
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
103-433 |
4.16e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.83 E-value: 4.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 103 QQRVAELEKINAEFLRAKQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDdlghlrTQLWEAQAEMENIKAIATV 182
Cdd:PTZ00121 1144 EARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAED------ARKAEAARKAEEERKAEEA 1217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 183 SENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEH--------QFHLRLEQERTQWAQYRESAEREIADLRRRLSE--- 251
Cdd:PTZ00121 1218 RKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEirkfeearMAHFARRQAAIKAEEARKADELKKAEEKKKADEakk 1297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 252 GQEEENLENEMKKAQE--DAEKLRSVVMPMEKEIAALKDKlteAEDKIKELEASKVKELNHYLEAEKScrtdlEMYVAVL 329
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEakKADEAKKKAEEAKKKADAAKKK---AEEAKKAAEAAKAEAEAAADEAEAA-----EEKAEAA 1369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 330 NTQKSVLQEDAEKLRKELHEVCHL------LEQERQQHNQLKHTwQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEE 403
Cdd:PTZ00121 1370 EKKKEEAKKKADAAKKKAEEKKKAdeakkkAEEDKKKADELKKA-AAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADE 1448
|
330 340 350
....*....|....*....|....*....|
gi 742155991 404 LKKKDQEEDEQQRLSKRKDHKKTDVEEEVK 433
Cdd:PTZ00121 1449 AKKKAEEAKKAEEAKKKAEEAKKADEAKKK 1478
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
110-408 |
4.84e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 4.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 110 EKINAEFLRAKQQLEQEFNQKRAKfkelYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQE 189
Cdd:PTZ00121 1532 EAKKADEAKKAEEKKKADELKKAE----ELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 190 AIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENEMKKAQEDA 269
Cdd:PTZ00121 1608 KAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 270 EKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMyvavlntqksvlQEDAEKLRKElhe 349
Cdd:PTZ00121 1688 KKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEED------------KKKAEEAKKD--- 1752
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 742155991 350 vchllEQERQQHNQLKHTWQKANDQFLESQRLLMRDmqrmEIVLTSEQLRQVEELKKKD 408
Cdd:PTZ00121 1753 -----EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEE----ELDEEDEKRRMEVDKKIKD 1802
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
110-430 |
1.02e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 1.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 110 EKINAEFLRAKQQLEQEFNQKRAK--FKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTK 187
Cdd:PTZ00121 1102 EAKKTETGKAEEARKAEEAKKKAEdaRKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAA 1181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 188 QEAIdEVKRQwrEEVASLQAVMK-ETVRDYEHQfhLRLEQERTQWAQYRESAEREIADLRRRLSEG---QEEENLENEMK 263
Cdd:PTZ00121 1182 RKAE-EVRKA--EELRKAEDARKaEAARKAEEE--RKAEEARKAEDAKKAEAVKKAEEAKKDAEEAkkaEEERNNEEIRK 1256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 264 KAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKScrtdlemyvAVLNTQKSVLQEDAEKL 343
Cdd:PTZ00121 1257 FEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKK---------AEEAKKADEAKKKAEEA 1327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 344 RKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRmeivlTSEQLRQVEELKKKDQEEDEQQRLSKRKDH 423
Cdd:PTZ00121 1328 KKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKK-----KEEAKKKADAAKKKAEEKKKADEAKKKAEE 1402
|
....*..
gi 742155991 424 KKTDVEE 430
Cdd:PTZ00121 1403 DKKKADE 1409
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
226-419 |
1.16e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 226 QERTQWAQYRESAEREIADLRRRLSEGQ-EEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASK 304
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKkEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 305 VKELNHYLE----AEKSCR-------------TDLEMYVAVLNTQKSVLQEDAEKLRKELHEvchlLEQERQQHNQLKHT 367
Cdd:COG4942 100 EAQKEELAEllraLYRLGRqpplalllspedfLDAVRRLQYLKYLAPARREQAEELRADLAE----LAALRAELEAERAE 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 742155991 368 WQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLSK 419
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
114-307 |
1.41e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.53 E-value: 1.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 114 AEFLRA--KQQLEQEFNQ---KRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENtKQ 188
Cdd:COG4717 40 LAFIRAmlLERLEKEADElfkPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELRE-EL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 189 EAIDEVKRQWR--EEVASLQAVMKETVRDYEHqfHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENL--ENEMKK 264
Cdd:COG4717 119 EKLEKLLQLLPlyQELEALEAELAELPERLEE--LEERLEELRELEEELEELEAELAELQEELEELLEQLSLatEEELQD 196
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 742155991 265 AQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKE 307
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAA 239
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
115-914 |
1.48e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 45.73 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 115 EFLRAKQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEV 194
Cdd:pfam02463 219 LELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEEL 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 195 KRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENEMKKAQEDAEKLRS 274
Cdd:pfam02463 299 KSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAK 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 275 VVMPMEKEIAALKDK-LTEAEDKIKELEASKVKEL-NHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 352
Cdd:pfam02463 379 KKLESERLSSAAKLKeEELELKSEEEKEAQLLLELaRQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQEL 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 353 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLSKRKDHKKTDVEE-- 430
Cdd:pfam02463 459 KLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVav 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 431 ---EVKIPVVCAlTHEESSAQLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKPDNDVFKDGLRRAQSTDSLGTSGSLQS 507
Cdd:pfam02463 539 enyKVAISTAVI-VEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADE 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 508 KALGYNYKAKSAGNLDESDFGPLVGADSVTENFDTASLGSLQMPSGFMLTKDQERAIKAMTPEQEETASLLSSvTQGMES 587
Cdd:pfam02463 618 DDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELA-KEEILR 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 588 AYVSPSGYRLVSETEWNLLQKEIHNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQ 667
Cdd:pfam02463 697 RQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKEL 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 668 --ELEDFIKQSTEDSSHQISALVLR--------------AQASEILLEELQQGFSQAKRDVQEQMAVLMQSREQVSEELV 731
Cdd:pfam02463 777 aeEREKTEKLKVEEEKEEKLKAQEEelraleeelkeeaeLLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEEL 856
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 732 RLQKDNDSLQGKHSLHVSLQQAEDFILPDTMEALRELVLKYRENIVNVRTAADHMEEKLKAEILFLKEQIQAEQCLKENL 811
Cdd:pfam02463 857 ERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEE 936
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 812 EETLQLEIENCKEEIAS-ISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKMTLEEQLKKETAAKVTVEQLMFEEKn 890
Cdd:pfam02463 937 PEELLLEEADEKEKEENnKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEET- 1015
|
810 820
....*....|....*....|....
gi 742155991 891 kAQRLQTELDVSEQVQRDFVKLSQ 914
Cdd:pfam02463 1016 -CQRLKEFLELFVSINKGWNKVFF 1038
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
107-205 |
2.05e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.15 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 107 AELEkINAEFLRAKQQLEQEFNQKRAKF---------KELYLAKE-EDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENI 176
Cdd:PRK12704 58 ALLE-AKEEIHKLRNEFEKELRERRNELqklekrllqKEENLDRKlELLEKREEELEKKEKELEQKQQELEKKEEELEEL 136
|
90 100 110
....*....|....*....|....*....|....*...
gi 742155991 177 KA--------IATVS-ENTKQEAIDEVKRQWREEVASL 205
Cdd:PRK12704 137 IEeqlqelerISGLTaEEAKEILLEKVEEEARHEAAVL 174
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
709-932 |
2.19e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.01 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 709 KRDVQEQMAVLMQSREQVSEELVRLQKDndslqgkhslhvsLQQAEdfilpdtmEALRELvlKYRENIVNVRTAADHMEE 788
Cdd:COG3206 163 EQNLELRREEARKALEFLEEQLPELRKE-------------LEEAE--------AALEEF--RQKNGLVDLSEEAKLLLQ 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 789 KLK---AEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIAS--ISSLKAELERIKVEKGQLESTLREKSQQLESLQEM 863
Cdd:COG3206 220 QLSeleSQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSpvIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQ 299
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 742155991 864 KMTLEEQLKKEtaakvtVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTL---QVQLERI-RQADSLERI 932
Cdd:COG3206 300 IAALRAQLQQE------AQRILASLEAELEALQAREASLQAQLAQLEARLAELpelEAELRRLeREVEVAREL 366
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
239-368 |
2.24e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.85 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 239 EREIADLRRRLSEGQEEENLENEMKKAQEDAE--KLRSVVMPMEKEIAALKDKLTEAEDKIKELEAsKVKELNhyLEAEK 316
Cdd:COG2433 383 EELIEKELPEEEPEAEREKEHEERELTEEEEEirRLEEQVERLEAEVEELEAELEEKDERIERLER-ELSEAR--SEERR 459
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 742155991 317 SCRTDLEMyvavlntqkSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTW 368
Cdd:COG2433 460 EIRKDREI---------SRLDREIERLERELEEERERIEELKRKLERLKELW 502
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
163-311 |
2.33e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.77 E-value: 2.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 163 RTQLWEAQAEMENIKAIATVS-ENTKQEAIDEVKRQWreevaslqavmketvrdyehqFHLRLEQERtqwaQYREsAERE 241
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEAKKEaEAIKKEALLEAKEEI---------------------HKLRNEFEK----ELRE-RRNE 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 242 IADLRRRLSegQEEENLENEMkkaqEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHY 311
Cdd:PRK12704 84 LQKLEKRLL--QKEENLDRKL----ELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERI 147
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
221-454 |
2.39e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 45.11 E-value: 2.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 221 HLRLEQERTQWAQYrESAEREiadlrrRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLteAEDKIKEL 300
Cdd:pfam17380 280 HQKAVSERQQQEKF-EKMEQE------RLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERM--AMEREREL 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 301 EASKVKELNHYLEAEKSCRTDLEM-YVAVLNTQKSVLQEDAEKLRKELHEV--CHLLEQERQQHNQLKHTW------QKA 371
Cdd:pfam17380 351 ERIRQEERKRELERIRQEEIAMEIsRMRELERLQMERQQKNERVRQELEAArkVKILEEERQRKIQQQKVEmeqiraEQE 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 372 NDQFLESQRLLMRDMQRMEIVLTSEQLRQVE-ELKKKDQEEDEQQRLSKRKDHKKTDVEEEVKIPVVCALTHEESSAQLS 450
Cdd:pfam17380 431 EARQREVRRLEEERAREMERVRLEEQERQQQvERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIE 510
|
....
gi 742155991 451 NEEE 454
Cdd:pfam17380 511 EERK 514
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
76-470 |
2.50e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.11 E-value: 2.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 76 EDSDMENSENFdmgFIQQIVFFFSVSLQQRVAELEKINAEFLRAKQQLEQEFNQKRAKFKELYLAK--EEDLkrqnavLQ 153
Cdd:pfam15921 96 ESNELHEKQKF---YLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKclKEDM------LE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 154 AAQDDLGHLRTQLWEAQAEMENIKAI------------------ATVSENTKQEAIDEVKRQWREEVASLQAVM------ 209
Cdd:pfam15921 167 DSNTQIEQLRKMMLSHEGVLQEIRSIlvdfeeasgkkiyehdsmSTMHFRSLGSAISKILRELDTEISYLKGRIfpvedq 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 210 KETVR-DYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEEN-LENEMKKAQEDAEKLRSVVM----PMEKEI 283
Cdd:pfam15921 247 LEALKsESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANsIQSQLEIIQEQARNQNSMYMrqlsDLESTV 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 284 AALKDKLTEA----EDKIKELEASKVKELNHYLEAekscRTDLEMYvavlNTQKSVLQEDAEKLRKELHEVCHLLEQERQ 359
Cdd:pfam15921 327 SQLRSELREAkrmyEDKIEELEKQLVLANSELTEA----RTERDQF----SQESGNLDDQLQKLLADLHKREKELSLEKE 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 360 QHNQL-----------KHTWQKANDQFLESQRLLMRdMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLSKRKDHKKTDV 428
Cdd:pfam15921 399 QNKRLwdrdtgnsitiDHLRRELDDRNMEVQRLEAL-LKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEML 477
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 742155991 429 EEEVKIPVVCALTHEESSAQLSNEEEHLDSTHGSVHSLDADL 470
Cdd:pfam15921 478 RKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEI 519
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
122-426 |
2.62e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.21 E-value: 2.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 122 QLEQEFNQKRAKFkelylakEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENT--------------K 187
Cdd:pfam12128 597 ASEEELRERLDKA-------EEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDlrrlfdekqsekdkK 669
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 188 QEAIDEVKRQWREEVASLQA---VMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEG--QEEENLENEM 262
Cdd:pfam12128 670 NKALAERKDSANERLNSLEAqlkQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDAQLALLKAAiaARRSGAKAEL 749
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 263 KKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA--SKVKELNHYLEAEKSCRTDlemyvaVLNTQKSVLQEDA 340
Cdd:pfam12128 750 KALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVrrQEVLRYFDWYQETWLQRRP------RLATQLSNIERAI 823
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 341 EKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLES---QRLLMRDMQRMEIVLTSEQ--------LRQVEELKKKDQ 409
Cdd:pfam12128 824 SELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENlrgLRCEMSKLATLKEDANSEQaqgsigerLAQLEDLKLKRD 903
|
330
....*....|....*..
gi 742155991 410 EEDEQqrLSKRKDHKKT 426
Cdd:pfam12128 904 YLSES--VKKYVEHFKN 918
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
175-363 |
2.79e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 2.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 175 NIKAIATVSEntKQEAIDEVKRQWREEVASLQAVMKETVRdyehQFHLRLEQERTQWAQYR-ESAEREIADL---RRRLS 250
Cdd:COG4913 608 NRAKLAALEA--ELAELEEELAEAEERLEALEAELDALQE----RREALQRLAEYSWDEIDvASAEREIAELeaeLERLD 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 251 EGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE-----ASKVKELNHYLEAEKSCRTDLEM 324
Cdd:COG4913 682 ASSDDlAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQdrleaAEDLARLELRALLEERFAAALGD 761
|
170 180 190
....*....|....*....|....*....|....*....
gi 742155991 325 yvAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQ 363
Cdd:COG4913 762 --AVERELRENLEERIDALRARLNRAEEELERAMRAFNR 798
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
188-903 |
3.15e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 44.72 E-value: 3.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 188 QEAIDEVKRQWREEVASLQAVMKETVRDYEHQ-FHLRLEQERTQWAQYRESAERE-IADLRRRlsEGQEEENLENE---- 261
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQkFYLRQSVIDLQTKLQEMQMERDaMADIRRR--ESQSQEDLRNQlqnt 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 262 --------------MKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAED----KIKELEASKVKELNHYLEAEKSCRTDLE 323
Cdd:pfam15921 151 vheleaakclkedmLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEasgkKIYEHDSMSTMHFRSLGSAISKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 324 MYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQH-NQL-------------KHTWQKANDQFLESQRLLMRDMQRM 389
Cdd:pfam15921 231 TEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRiEQLiseheveitglteKASSARSQANSIQSQLEIIQEQARN 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 390 EivlTSEQLRQVEELKKKDQEEDEQQRLSKRKDHKKTDVEEEVKIPVVCALTH-----EESSAQLSNEEEHLDSTHGSVH 464
Cdd:pfam15921 311 Q---NSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEarterDQFSQESGNLDDQLQKLLADLH 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 465 SLDADLLLPSGDPFSKPD----NDVFKDGLRRAQSTDSLGTSgslQSKALGYNYKAKSAGNLdESDFGPLVGADSVTENf 540
Cdd:pfam15921 388 KREKELSLEKEQNKRLWDrdtgNSITIDHLRRELDDRNMEVQ---RLEALLKAMKSECQGQM-ERQMAAIQGKNESLEK- 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 541 dTASLGSLQMPSGFMLTKD-QERAIKAMTPEQ-EETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEIHNAGNKlg 618
Cdd:pfam15921 463 -VSSLTAQLESTKEMLRKVvEELTAKKMTLESsERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNE-- 539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 619 rrCDMCSNYEKQLQGIQIQEAET-------RDQVKKLQVMLRQ----------ANDQLEKTMKDKQ-ELEDF--IKQSTE 678
Cdd:pfam15921 540 --GDHLRNVQTECEALKLQMAEKdkvieilRQQIENMTQLVGQhgrtagamqvEKAQLEKEINDRRlELQEFkiLKDKKD 617
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 679 DSSHQISALVLRAQASEILLEELQQGFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFIL 758
Cdd:pfam15921 618 AKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKL 697
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 759 PDTMEALRELVLKYRENIVNVRTAADHMEE---KLKAEILFLKEQIQAEQCLKENLEETL---QLEIENCKEEIasiSSL 832
Cdd:pfam15921 698 KMQLKSAQSELEQTRNTLKSMEGSDGHAMKvamGMQKQITAKRGQIDALQSKIQFLEEAMtnaNKEKHFLKEEK---NKL 774
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 742155991 833 KAELERIKVEKGQLESTLREKSQQLESLQEMKMTLEEQLKKETAAKVTVEQLMFEEKNKAQR--LQTELDVSE 903
Cdd:pfam15921 775 SQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRlkLQHTLDVKE 847
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
101-302 |
4.27e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 4.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 101 SLQQRVAELEKINAEFLRAKQQLEQEFNQKRAKFKELYLAkEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEmenIKAIA 180
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAAL-ERRIAALARRIRALEQELAALEAELAELEKE---IAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 181 TVSENTKQEAIDEVKRQWR----------------EEVASLQAVMKETVRDYEHQFHlRLEQERTQWAQYRESAEREIAD 244
Cdd:COG4942 97 AELEAQKEELAELLRALYRlgrqpplalllspedfLDAVRRLQYLKYLAPARREQAE-ELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 742155991 245 LRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA 302
Cdd:COG4942 176 LEALLAELEEErAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
606-816 |
4.91e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 4.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 606 LQKEIHNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEDSSHQIS 685
Cdd:COG4942 32 LQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLR 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 686 ALVLRAQASEILLEELQQGFSQAKRDVQeQMAVLMQSREQVSEELVRLQKDNDSLQgkhslhVSLQQAEdfilpDTMEAL 765
Cdd:COG4942 112 ALYRLGRQPPLALLLSPEDFLDAVRRLQ-YLKYLAPARREQAEELRADLAELAALR------AELEAER-----AELEAL 179
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 742155991 766 RELVLKYRENIVNVRTAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQ 816
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIA 230
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
103-248 |
5.63e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 5.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 103 QQRVAELEKINAEFLRAKQQLEQEFNQKRAKFKELyLAKEEDLKRQnaVLQAAQDDLGHLRTQLWEAQAEMENIKAIAT- 181
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDAL-REELDELEAQ--IRGNGGDRLEQLEREIERLERELEERERRRAr 363
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 742155991 182 ---------VSENTKQEAIDEVKRQWREEVASLQAvMKETVRDYEHQFHLRLEQERTQwaqyRESAEREIADLRRR 248
Cdd:COG4913 364 leallaalgLPLPASAEEFAALRAEAAALLEALEE-ELEALEEALAEAEAALRDLRRE----LRELEAEIASLERR 434
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
631-949 |
6.66e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 6.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 631 LQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEdsshqisalvLRAQASE-ILLEELQQGFSQAK 709
Cdd:PRK03918 240 IEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKE----------LKEKAEEyIKLSEFYEEYLDEL 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 710 RDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQqaedfilpDTMEALRELVLKYREnivnVRTAADHMEEK 789
Cdd:PRK03918 310 REIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELE--------KRLEELEERHELYEE----AKAKKEELERL 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 790 LKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIAS----ISSLKAELERIKVEKGQLESTLREksqqleslqemkm 865
Cdd:PRK03918 378 KKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGElkkeIKELKKAIEELKKAKGKCPVCGRE------------- 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 866 tLEEQLKKETAAKVTVEQlmfeeKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKLTDIN 945
Cdd:PRK03918 445 -LTEEHRKELLEEYTAEL-----KRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLE 518
|
....
gi 742155991 946 QLPE 949
Cdd:PRK03918 519 ELEK 522
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
168-365 |
6.79e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 6.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 168 EAQAEMENIKAIATVSENTKQ-----EAIDEVKRQWREEVASLQAV--MKETVRDYEHQFHLRL-EQERTQWAQYRESAE 239
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREqiellEPIRELAERYAAARERLAELeyLRAALRLWFAQRRLELlEAELEELRAELARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 240 REIADLRRRLSEGQEE-ENLENEMKKAQEDAEKlrsvvmPMEKEIAALKDKLTEAEDKIKELEAsKVKELNHYLEAEksc 318
Cdd:COG4913 309 AELERLEARLDALREElDELEAQIRGNGGDRLE------QLEREIERLERELEERERRRARLEA-LLAALGLPLPAS--- 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 742155991 319 RTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLK 365
Cdd:COG4913 379 AEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELE 425
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
147-898 |
7.36e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.59 E-value: 7.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 147 RQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMK--ETVRDYEH----QF 220
Cdd:PTZ00121 1059 KAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKkaEDARKAEEarkaED 1138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 221 HLRLEQERTQWAQYRESAEREIADLRR-RLSEGQEEENLENEMKKAQE--DAEKLRSVVMPMEKEIAALKDKLTEAEDKI 297
Cdd:PTZ00121 1139 ARKAEEARKAEDAKRVEIARKAEDARKaEEARKAEDAKKAEAARKAEEvrKAEELRKAEDARKAEAARKAEEERKAEEAR 1218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 298 KELEASKVKELNHYLEAEKScrtdlemyvavlntqksvlQEDAEKLRKE-LHEVCHLLEQERQQHNQLKHTWQKANDQFL 376
Cdd:PTZ00121 1219 KAEDAKKAEAVKKAEEAKKD-------------------AEEAKKAEEErNNEEIRKFEEARMAHFARRQAAIKAEEARK 1279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 377 ESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLSKRKDHKKTDVE------EEVKIPVVCALTHEESSA--- 447
Cdd:PTZ00121 1280 ADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADaakkkaEEAKKAAEAAKAEAEAAAdea 1359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 448 QLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKPDnDVFKDGLRRAQSTDSLGTSGSLQSKALGYNYKAKSAGNLDEsdf 527
Cdd:PTZ00121 1360 EAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKAD-EAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADE--- 1435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 528 gpLVGADSVTENFDTASLGSLQMPSGFMLTKDQERAIKAMTPEQE-ETASLLSSVTQGMESAYVSPSGYRLVSETEWNll 606
Cdd:PTZ00121 1436 --AKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKaEEAKKADEAKKKAEEAKKKADEAKKAAEAKKK-- 1511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 607 QKEIHNAGNKlgRRCDMCSNYEKQLQGIQIQEAETR---DQVKKLQvMLRQANDQLEKTMKDKQEledfikqstEDSSHQ 683
Cdd:PTZ00121 1512 ADEAKKAEEA--KKADEAKKAEEAKKADEAKKAEEKkkaDELKKAE-ELKKAEEKKKAEEAKKAE---------EDKNMA 1579
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 684 ISALVLRAQASEILLEELQQGFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFILPDTME 763
Cdd:PTZ00121 1580 LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEEN 1659
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 764 ALRELVLKYRENivnvrtaadhmEEKLKAeilflkEQIQAEQCLKENLEETLQLEIENcKEEIASISSLKAELERIKVEK 843
Cdd:PTZ00121 1660 KIKAAEEAKKAE-----------EDKKKA------EEAKKAEEDEKKAAEALKKEAEE-AKKAEELKKKEAEEKKKAEEL 1721
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 742155991 844 GQLESTLREKSQQLESLQEMKMTLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTE 898
Cdd:PTZ00121 1722 KKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKE 1776
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
102-425 |
7.50e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 7.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 102 LQQRVAELEKINAEFLRAKQQLEQEFNQKR-----------AKFKELYLAKEEdLKRQNAVLQAAQDDLGHLRTQLWEAQ 170
Cdd:PRK03918 350 LEKRLEELEERHELYEEAKAKKEELERLKKrltgltpekleKELEELEKAKEE-IEEEISKITARIGELKKEIKELKKAI 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 171 AEMENIKAIATV-SENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRL 249
Cdd:PRK03918 429 EELKKAKGKCPVcGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKEL 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 250 SEGQEEENLEnEMKKAQEDAEKLRSVVMPMEKEI----------AALKDKLTEAEDKIKELEaSKVKELNHYLEAEK-SC 318
Cdd:PRK03918 509 EEKLKKYNLE-ELEKKAEEYEKLKEKLIKLKGEIkslkkeleklEELKKKLAELEKKLDELE-EELAELLKELEELGfES 586
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 319 RTDLEM-----------YVAVLNTQKSV---------LQEDAEKLRKELHEVCHLLEQERQQHNQLK-----HTWQKAND 373
Cdd:PRK03918 587 VEELEErlkelepfyneYLELKDAEKELereekelkkLEEELDKAFEELAETEKRLEELRKELEELEkkyseEEYEELRE 666
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 742155991 374 QFLESQRLLMRDMQRMEivltsEQLRQVEELKK--KDQEEDEQQRLSKRKDHKK 425
Cdd:PRK03918 667 EYLELSRELAGLRAELE-----ELEKRREEIKKtlEKLKEELEEREKAKKELEK 715
|
|
| FPP |
pfam05911 |
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant ... |
791-923 |
7.54e-04 |
|
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant proteins that are filament-like. It interacts with the nuclear envelope-associated protein, MAF1, the WPP family pfam13943.
Pssm-ID: 461778 [Multi-domain] Cd Length: 859 Bit Score: 43.51 E-value: 7.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 791 KAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIA-------SISSLKAELERIKVEKGQLEStlreksqQLESLQEM 863
Cdd:pfam05911 680 TEENKRLKEEFEQLKSEKENLEVELASCTENLESTKSqlqeseqLIAELRSELASLKESNSLAET-------QLKCMAES 752
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 864 KMTLEEQLkkeTAAKVTVEQLmfeeKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERI 923
Cdd:pfam05911 753 YEDLETRL---TELEAELNEL----RQKFEALEVELEEEKNCHEELEAKCLELQEQLERN 805
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
710-946 |
7.78e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.51 E-value: 7.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 710 RDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFILPDTMEALRELVLKYRENIvnvrTAADHMEEK 789
Cdd:TIGR02168 182 ERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEEL----KEAEEELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 790 LKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKMTLEE 869
Cdd:TIGR02168 258 LTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAE 337
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 742155991 870 QLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKLTDINQ 946
Cdd:TIGR02168 338 ELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLED 414
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
101-433 |
8.94e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 8.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 101 SLQQRVAELEKINAEFLRAKQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQA-----EMEN 175
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAaekkkEEAK 1377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 176 IKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAE--REIADLRRRLSEGQ 253
Cdd:PTZ00121 1378 KKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEeaKKADEAKKKAEEAK 1457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 254 EEENLenemKKAQEDAEKLRSVVMPMEKEIAA--LKDKLTEAEDKIKEL-----EASKVKELNHYLEAEKSCRT-DLEMY 325
Cdd:PTZ00121 1458 KAEEA----KKKAEEAKKADEAKKKAEEAKKAdeAKKKAEEAKKKADEAkkaaeAKKKADEAKKAEEAKKADEAkKAEEA 1533
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 326 VAVLNTQKSVLQEDAEKLRK--ELH--EVCHLLEQERQQHNQLKHTWQKAND--QFLESQRLLMRDMQRMEIVLTSEQLR 399
Cdd:PTZ00121 1534 KKADEAKKAEEKKKADELKKaeELKkaEEKKKAEEAKKAEEDKNMALRKAEEakKAEEARIEEVMKLYEEEKKMKAEEAK 1613
|
330 340 350
....*....|....*....|....*....|....
gi 742155991 400 QVEELKKKDQEEDEQQRLSKRKDHKKTDVEEEVK 433
Cdd:PTZ00121 1614 KAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKK 1647
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
174-315 |
1.14e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.54 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 174 ENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHlRLEQertqwaqYRESAEREIADLRRRLSEGQ 253
Cdd:COG2433 376 LSIEEALEELIEKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVE-RLEA-------EVEELEAELEEKDERIERLE 447
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 742155991 254 EEenLENEMKKAQEDAEKLRSVVMpMEKEIAALKDKLTEAEDKIKELEaSKVKELNHYLEAE 315
Cdd:COG2433 448 RE--LSEARSEERREIRKDREISR-LDREIERLERELEEERERIEELK-RKLERLKELWKLE 505
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
639-937 |
1.19e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 42.75 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 639 AETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEDSSHQISALVLRAQASEILLEELQQGFSQAKRdVQEQMAV 718
Cdd:TIGR02169 180 EEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEE-ELEKLTE 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 719 LMQSREQVSEELVRLqkdndslqgkhslhvsLQQAEDFILPDTMEALRELVLKYRENIVNVRTAADHMEEKLKAEilflk 798
Cdd:TIGR02169 259 EISELEKRLEEIEQL----------------LEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKEREL----- 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 799 EQIQAEQCLKENLEETLQLEIENckeeiasissLKAELERIKVEKGQLESTLREKSQQLESLQEmkmTLEEqlkKETAAK 878
Cdd:TIGR02169 318 EDAEERLAKLEAEIDKLLAEIEE----------LEREIEEERKRRDKLTEEYAELKEELEDLRA---ELEE---VDKEFA 381
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 742155991 879 VTVEQLMfEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQAdsLERIRAILN 937
Cdd:TIGR02169 382 ETRDELK-DYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAA--IAGIEAKIN 437
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
102-458 |
1.36e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 102 LQQRVAELEKINAEF---LRAKQQLEQEFNQKRAKFKELY-----LAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEM 173
Cdd:COG4717 76 LEEELKEAEEKEEEYaelQEELEELEEELEELEAELEELReelekLEKLLQLLPLYQELEALEAELAELPERLEELEERL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 174 ENIKaiatvsenTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHlRLEQERTQWAQYRESAEREIADLRRRLSEGQ 253
Cdd:COG4717 156 EELR--------ELEEELEELEAELAELQEELEELLEQLSLATEEELQ-DLAEELEELQQRLAELEEELEEAQEELEELE 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 254 EEENLENEMKKAQEDAEKLRS------------VVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTD 321
Cdd:COG4717 227 EELEQLENELEAAALEERLKEarlllliaaallALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEE 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 322 LEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDqfLESQRLLMRDMQRMEIVLTSEQLRQV 401
Cdd:COG4717 307 LQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEE--LEEELQLEELEQEIAALLAEAGVEDE 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 742155991 402 EELKKKDQEEDEQQRLSKRKDHKKTDVEEEVK--IPVVCALTHEESSAQLSNEEEHLDS 458
Cdd:COG4717 385 EELRAALEQAEEYQELKEELEELEEQLEELLGelEELLEALDEEELEEELEELEEELEE 443
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
706-926 |
1.47e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 706 SQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKhslhvsLQQAEDFI--LPDTMEALRELVLKYRENIVNVRTAA 783
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQ------LAALERRIaaLARRIRALEQELAALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 784 DHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKA-------ELERIKVEKGQLESTLREKSQQ 856
Cdd:COG4942 93 AELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYlaparreQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 857 LESLQEMKMTLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQA 926
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| PRK05563 |
PRK05563 |
DNA polymerase III subunits gamma and tau; Validated |
57-308 |
1.52e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 235505 [Multi-domain] Cd Length: 559 Bit Score: 42.17 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 57 LVAKLGhliSEPYLYLQKPEDSD--MENSENFDMGFIQQIVFFFSVSLQQ----------------RVAELEKINAEFLR 118
Cdd:PRK05563 293 LLVKTS---PELEILDESTENDElfKELSEKLDIERLYRMIDILNDAQQQikwtnqpriylevalvKLCEQAAASPEYDT 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 119 AKQQLEQEFNQKRAKFKELylaKEEDLKRQNAVLQAAQDDLGHLRTQlweAQAEMENIKAIAtvsENTKQEAIDEVKRQW 198
Cdd:PRK05563 370 ELEVLLQRVEQLEQELKQL---KAQPVGVAPEQKEKKKEKKKNKKKK---YKVPRGKIYKVL---KEATRQDLELLKNVW 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 199 -------REEVASLQAVMK--ETVRDYEHQFHLRLEqertqwaqYRESAEREIADlrrrlseGQEEENLENEMKKAQEDA 269
Cdd:PRK05563 441 geileslKAQRKSLRALLVnsEPVAASEDTVVLAFE--------YEIHFEKAMLD-------KELNDTIENILSKLLGKS 505
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 742155991 270 EKLRSVVMPMEKEI-----AALKDKLTEAEDKIKELEASKVKEL 308
Cdd:PRK05563 506 VEIVAVPEDEWQKIreeflQKHKNEEEEEEEEEELPLIPEAKEL 549
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
169-900 |
1.52e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 42.36 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 169 AQAEMENIKAIATVSE-NTKQEAIDEVKRQWREEVASLQAVMKETVRDYEhqfhlRLEQERTQWAQYR----ESAEREIA 243
Cdd:TIGR02169 152 PVERRKIIDEIAGVAEfDRKKEKALEELEEVEENIERLDLIIDEKRQQLE-----RLRREREKAERYQallkEKREYEGY 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 244 DLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKEL---EASKVKELNHYLEAE-KSC 318
Cdd:TIGR02169 227 ELLKEKEALERQkEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgeeEQLRVKEKIGELEAEiASL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 319 RT----------DLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQ-------ERQQHNQLKHTWQKANDQFLESQRL 381
Cdd:TIGR02169 307 ERsiaekereleDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKlteeyaeLKEELEDLRAELEEVDKEFAETRDE 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 382 LMRDMQRMEIV------LTSEQLRQVEELKKKDQE--EDEQQRLSKRKDHKKTDVEEEVKIPVVCALTHEESS------- 446
Cdd:TIGR02169 387 LKDYREKLEKLkreineLKRELDRLQEELQRLSEElaDLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQlaadlsk 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 447 --AQLSNEEEHLDSTHGSVHSLDADL--------LLPSGDPFSKPDNDVFKDGLR--------------RAQSTDSLGTS 502
Cdd:TIGR02169 467 yeQELYDLKEEYDRVEKELSKLQRELaeaeaqarASEERVRGGRAVEEVLKASIQgvhgtvaqlgsvgeRYATAIEVAAG 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 503 GSLQSKALGYNYKAKSA------GNLDESDFGPLvgadsvTENFDTASLGSLQMPSGFMltkdqERAIKAMTPEQEETAS 576
Cdd:TIGR02169 547 NRLNNVVVEDDAVAKEAiellkrRKAGRATFLPL------NKMRDERRDLSILSEDGVI-----GFAVDLVEFDPKYEPA 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 577 LL-----SSVTQGMESAYVSPSGYRLVSeTEWNLLQKEIHNAGNklgrrcdmcSNYEKQLQGIQIQEaetRDQVKKLQVM 651
Cdd:TIGR02169 616 FKyvfgdTLVVEDIEAARRLMGKYRMVT-LEGELFEKSGAMTGG---------SRAPRGGILFSRSE---PAELQRLRER 682
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 652 LRQANDQLEKTMKDKQELE---DFIKQSTEDSSHQISALVLRAQaseiLLEELQQGFSQAKRDVQEQMAVLMQSREQVSE 728
Cdd:TIGR02169 683 LEGLKRELSSLQSELRRIEnrlDELSQELSDASRKIGEIEKEIE----QLEQEEEKLKERLEELEEDLSSLEQEIENVKS 758
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 729 ELVRLQKDNDSLQGK-HSLHVSLQQAEDFILPDTMEALRELVLKYRENIVNVRTAADHMEEKLKAEiLFLKEQIQAEQCL 807
Cdd:TIGR02169 759 ELKELEARIEELEEDlHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRL-TLEKEYLEKEIQE 837
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 808 KENLEETLQLEIENCKEEIAS----ISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKMTLEEQLKKETAAKVTVEQ 883
Cdd:TIGR02169 838 LQEQRIDLKEQIKSIEKEIENlngkKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRK 917
|
810
....*....|....*..
gi 742155991 884 LMFEEKNKAQRLQTELD 900
Cdd:TIGR02169 918 RLSELKAKLEALEEELS 934
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
239-360 |
1.78e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.06 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 239 EREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE-----ASKVKELN--- 309
Cdd:COG1579 16 DSELDRLEHRLKELPAElAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEeqlgnVRNNKEYEalq 95
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 742155991 310 HYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQ 360
Cdd:COG1579 96 KEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAE 146
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
637-933 |
1.98e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 42.27 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 637 QEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEDSSHQISALVLRAQASEILLEELQQGFSQAKRDVQEQM 716
Cdd:pfam02463 177 KLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESS 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 717 AVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFILPDTMEALRELVLKYRENIVNvrtaadHMEEKLKAEILF 796
Cdd:pfam02463 257 KQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKE------SEKEKKKAEKEL 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 797 LKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKMTLEEQLKKETA 876
Cdd:pfam02463 331 KKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLL 410
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 742155991 877 AKVTVEQLMF--EEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIR 933
Cdd:pfam02463 411 LELARQLEDLlkEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKK 469
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
264-465 |
2.10e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.20 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 264 KAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIK-------------ELEASKVKELNHYLEAEKSCRTDLEMYVAVLN 330
Cdd:PLN02939 153 QALEDLEKILTEKEALQGKINILEMRLSETDARIKlaaqekihveileEQLEKLRNELLIRGATEGLCVHSLSKELDVLK 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 331 TQKSVLQEDAEKLRKELHEVCH------LLEQERqqhNQLKHTWQKANDQFLESQrllmRDMQRMEIVLTSEQLRQVEEL 404
Cdd:PLN02939 233 EENMLLKDDIQFLKAELIEVAEteervfKLEKER---SLLDASLRELESKFIVAQ----EDVSKLSPLQYDCWWEKVENL 305
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 742155991 405 -----KKKDQEEDEQQRLSKRKD-HKKTD-VEEEVKIPVVCALTHEES---SAQLSNEEEHLDSTHGSVHS 465
Cdd:PLN02939 306 qdlldRATNQVEKAALVLDQNQDlRDKVDkLEASLKEANVSKFSSYKVellQQKLKLLEERLQASDHEIHS 376
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
232-431 |
2.17e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 2.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 232 AQYRESAEREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMP--MEKEIAALKDKLTEAEDKIKELEASkvkel 308
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERlEALEAELDALQERREALQRLAEYswDEIDVASAEREIAELEAELERLDAS----- 683
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 309 NHYLEAekscrtdlemyvavlntqksvLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQR 388
Cdd:COG4913 684 SDDLAA---------------------LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDL 742
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 742155991 389 MEIVLTSEQLRQVEELKKKDQEEDEQQRLSKRKDHKKTDVEEE 431
Cdd:COG4913 743 ARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRA 785
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
690-928 |
2.20e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 2.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 690 RAQASEILLEELQQGFSQAKRDVQeqmavlmqsreqvseELVRLQKDNDSLQGKHsLHVSLQqaedfilPDTMEALRELV 769
Cdd:PRK04863 787 RIEQLRAEREELAERYATLSFDVQ---------------KLQRLHQAFSRFIGSH-LAVAFE-------ADPEAELRQLN 843
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 770 LKYREnIVNVRTAADHMEEKLKAEILFLKEQIQA-EQCLKEN---LEETLQLEIENCKEEIASISSLKAELERIKVEKGQ 845
Cdd:PRK04863 844 RRRVE-LERALADHESQEQQQRSQLEQAKEGLSAlNRLLPRLnllADETLADRVEEIREQLDEAEEAKRFVQQHGNALAQ 922
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 846 LE---STLREKSQQLESLQEMKMTLEEQLKKETAAKVTVEQLM-----FEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQ 917
Cdd:PRK04863 923 LEpivSVLQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVqrrahFSYEDAAEMLAKNSDLNEKLRQRLEQAEQERT 1002
|
250
....*....|.
gi 742155991 918 VQLERIRQADS 928
Cdd:PRK04863 1003 RAREQLRQAQA 1013
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
101-313 |
2.38e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 2.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 101 SLQQRVAELEKINAEFLRAKQQLEqefnQKRAKFKELYLAKEEdLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIA 180
Cdd:COG4913 672 ELEAELERLDASSDDLAALEEQLE----ELEAELEELEEELDE-LKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLE 746
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 181 TVSENTK---QEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLR--RRLSEGQEE 255
Cdd:COG4913 747 LRALLEErfaAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPeyLALLDRLEE 826
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 742155991 256 ENL---ENEMKKAQEDAeklrsvvmpMEKEIAALKDKLTEAEDKIKEleasKVKELNHYLE 313
Cdd:COG4913 827 DGLpeyEERFKELLNEN---------SIEFVADLLSKLRRAIREIKE----RIDPLNDSLK 874
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
101-311 |
2.90e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.54 E-value: 2.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 101 SLQQRVAELEKiNAEFLRAKQqlEQEFNQKRAKFKELyLAKEEDLKRQNAVLQAA-----------QDDLGHLRTQLWEA 169
Cdd:PHA02562 192 HIQQQIKTYNK-NIEEQRKKN--GENIARKQNKYDEL-VEEAKTIKAEIEELTDEllnlvmdiedpSAALNKLNTAAAKI 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 170 QAEMENIKAIA------TVSENTKQEAIDEVKRqwreeVASLQAVMKETVRDYEhQFHLRLEQERTQWAQYREsAEREIA 243
Cdd:PHA02562 268 KSKIEQFQKVIkmyekgGVCPTCTQQISEGPDR-----ITKIKDKLKELQHSLE-KLDTAIDELEEIMDEFNE-QSKKLL 340
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 742155991 244 DLRRRLS-EGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLteaeDKIKELEASKVKELNHY 311
Cdd:PHA02562 341 ELKNKIStNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDEL----DKIVKTKSELVKEKYHR 405
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
101-359 |
3.13e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.56 E-value: 3.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 101 SLQQRVAELEKINAEFLRAK-QQLEQEFNQKRAKFKELylakEEDLKRQNAVLQAAQDDLG---HLRTQLWEAQAEMENI 176
Cdd:PRK02224 188 SLDQLKAQIEEKEEKDLHERlNGLESELAELDEEIERY----EEQREQARETRDEADEVLEeheERREELETLEAEIEDL 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 177 KAIATVSENTKQEAIDEVKRQwREEVASLQAVMKETVRD--YEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQE 254
Cdd:PRK02224 264 RETIAETEREREELAEEVRDL-RERLEELEEERDDLLAEagLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 255 E-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEaSKVKELNHYLEAEKSCRTDLEMYVAVLNTQK 333
Cdd:PRK02224 343 EaESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELE-EEIEELRERFGDAPVDLGNAEDFLEELREER 421
|
250 260
....*....|....*....|....*.
gi 742155991 334 SVLQEDAEKLRKELHEVCHLLEQERQ 359
Cdd:PRK02224 422 DELREREAELEATLRTARERVEEAEA 447
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
103-303 |
4.22e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.88 E-value: 4.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 103 QQRVAELEKINAEFLRAKQQLEQEFNQkrakfkelylakEEDLKRQNAVLQAAQDDlghlrtqlwEAQAEMENIKAIATV 182
Cdd:pfam17380 442 EERAREMERVRLEEQERQQQVERLRQQ------------EEERKRKKLELEKEKRD---------RKRAEEQRRKILEKE 500
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 183 SENTKQEAIDEV-KRQWREEvaslqavmketvrdyehqfhlrlEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENE 261
Cdd:pfam17380 501 LEERKQAMIEEErKRKLLEK-----------------------EMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQ 557
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 742155991 262 MKKAQEDaeklRSVVMPMEKEIAALKdKLTEAEDKIKELEAS 303
Cdd:pfam17380 558 MRKATEE----RSRLEAMEREREMMR-QIVESEKARAEYEAT 594
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
642-917 |
5.58e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 40.66 E-value: 5.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 642 RDQVKKLQVMLRQANDQLEKTMKDKQELEDFI--------KQSTEDSSHQISALVLRAQASEILLEELQQGFSQAK---- 709
Cdd:PLN02939 48 KKRGKNIAPKQRSSNSKLQSNTDENGQLENTSlrtvmelpQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEqlsd 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 710 ----------RDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGK-HSLHVSLQQAEDFILPDT-----MEALRELVLKYR 773
Cdd:PLN02939 128 fqledlvgmiQNAEKNILLLNQARLQALEDLEKILTEKEALQGKiNILEMRLSETDARIKLAAqekihVEILEEQLEKLR 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 774 ENIVNVRTAADHMEEKLKAEILFLKEqiqaeqclkENLeeTLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREK 853
Cdd:PLN02939 208 NELLIRGATEGLCVHSLSKELDVLKE---------ENM--LLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLREL 276
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 742155991 854 SQQLESLQEMKMTLEEQLKKETAAKVTVEQLMFEE-KNKAQRLQTELDVSEQVQRDFVKLSQTLQ 917
Cdd:PLN02939 277 ESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRaTNQVEKAALVLDQNQDLRDKVDKLEASLK 341
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
103-308 |
7.84e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.12 E-value: 7.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 103 QQRVAELEKINAEFLRAKQQLEQEFNQKRAKFKELYLAKEEDlKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATV 182
Cdd:PTZ00121 1632 KKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEED-KKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKK 1710
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 183 SENTKQEAiDEVKRQWREEVASLQAVMKETVRDYEHQFHLRL-EQERTQWAQYRESAEREIADLRRRLSEGQEEENLENE 261
Cdd:PTZ00121 1711 EAEEKKKA-EELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKdEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEED 1789
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 742155991 262 MKKAQEDAEKLRSVVMPMEKEIAALKdKLTEAEDKIKELEASKVKEL 308
Cdd:PTZ00121 1790 EKRRMEVDKKIKDIFDNFANIIEGGK-EGNLVINDSKEMEDSAIKEV 1835
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
236-431 |
8.45e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 40.05 E-value: 8.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 236 ESAEREIADLRRRLSEGQEE-ENLENEMKKAQEDAEK---LRSVVMPMEKEIAALKDKLTEAEDKIKELEaSKVKELNHY 311
Cdd:PRK03918 203 EEVLREINEISSELPELREElEKLEKEVKELEELKEEieeLEKELESLEGSKRKLEEKIRELEERIEELK-KEIEELEEK 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 312 LEAEKSCRTDLEMYVAvlntqksvLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDmqrmei 391
Cdd:PRK03918 282 VKELKELKEKAEEYIK--------LSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKL------ 347
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 742155991 392 vltSEQLRQVEELKKKDQEEDEQQRLSKRKDHKKTDVEEE 431
Cdd:PRK03918 348 ---KELEKRLEELEERHELYEEAKAKKEELERLKKRLTGL 384
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
133-434 |
8.92e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 40.09 E-value: 8.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 133 KFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENI--KAIATVSENTKQEAIDEVKRQWREEVASLQAVMK 210
Cdd:pfam05483 89 KIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVslKLEEEIQENKDLIKENNATRHLCNLLKETCARSA 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 211 ETVRDYEHQ----------FHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVM-- 277
Cdd:pfam05483 169 EKTKKYEYEreetrqvymdLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKiQHLEEEYKKEINDKEKQVSLLLiq 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 278 --PMEKEIAALKDKLTEAEDKIKELE------ASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHE 349
Cdd:pfam05483 249 itEKENKMKDLTFLLEESRDKANQLEektklqDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQ 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 350 VCHLLEQERQQHNQLKHTWQKANDQFLES----QRLLMRDMQRMEivLTSEQLRQVE-ELKKKDQEEDEqqrLSKRKDHK 424
Cdd:pfam05483 329 LTEEKEAQMEELNKAKAAHSFVVTEFEATtcslEELLRTEQQRLE--KNEDQLKIITmELQKKSSELEE---MTKFKNNK 403
|
330
....*....|
gi 742155991 425 KTDVEEEVKI 434
Cdd:pfam05483 404 EVELEELKKI 413
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
711-934 |
9.25e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 39.90 E-value: 9.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 711 DVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEdfilpdtmealrELVLKYRENIVNVRTAADHMEEkl 790
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREAL------------QRLAEYSWDEIDVASAEREIAE-- 672
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 791 kaeilfLKEQIqaEQCLKENLE-ETLQLEIENCKEEIAsisSLKAELERIKVEKGQLESTLREKSQQLESLQemkmtleE 869
Cdd:COG4913 673 ------LEAEL--ERLDASSDDlAALEEQLEELEAELE---ELEEELDELKGEIGRLEKELEQAEEELDELQ-------D 734
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 742155991 870 QLKKETAAKVTVEQLMFEEKNKAQRLQtelDVSEQVQRDFVKLSQTLQVQLERIRQAdsLERIRA 934
Cdd:COG4913 735 RLEAAEDLARLELRALLEERFAAALGD---AVERELRENLEERIDALRARLNRAEEE--LERAMR 794
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
280-471 |
9.27e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 39.92 E-value: 9.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 280 EKEIAALKDKLTEAEDKIKELE------------ASKVKELNHYLEAEKSC-----RTDLEMYVAVLNTQKSVLQEDAEK 342
Cdd:COG1196 178 ERKLEATEENLERLEDILGELErqleplerqaekAERYRELKEELKELEAEllllkLRELEAELEELEAELEELEAELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 343 LRKELHEVCHLLEQERQQHNQLkhtwQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLSKRKD 422
Cdd:COG1196 258 LEAELAELEAELEELRLELEEL----ELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELE 333
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 742155991 423 HKKTDVEEEVKIPVVCALTHEESSAQLSNEEEHLDSTHGSVHSLDADLL 471
Cdd:COG1196 334 ELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELE 382
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
103-420 |
9.36e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 39.94 E-value: 9.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 103 QQRVAELEKINAEFLRAKQQLEQEFNQ----------------KRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQL 166
Cdd:PRK04863 306 QYRLVEMARELAELNEAESDLEQDYQAasdhlnlvqtalrqqeKIERYQADLEELEERLEEQNEVVEEADEQQEENEARA 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 167 WEAQAEMENIKA-IATVsentkQEAIDEVKR---QWREEVASLQAVMK---------ETVRDYEHQFHLRLEQ---ERTQ 230
Cdd:PRK04863 386 EAAEEEVDELKSqLADY-----QQALDVQQTraiQYQQAVQALERAKQlcglpdltaDNAEDWLEEFQAKEQEateELLS 460
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 231 WAQYRESAE------REIADLRRRLSEGQEEENLENEMKKAQEDAEKLRSV---VMPMEKEIAALKDKLTEAEDKIKELE 301
Cdd:PRK04863 461 LEQKLSVAQaahsqfEQAYQLVRKIAGEVSRSEAWDVARELLRRLREQRHLaeqLQQLRMRLSELEQRLRQQQRAERLLA 540
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 742155991 302 ASKVKELNHYLEAE--KSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEvchlLEQERQQHNQLKHTWQKAND------ 373
Cdd:PRK04863 541 EFCKRLGKNLDDEDelEQLQEELEARLESLSESVSEARERRMALRQQLEQ----LQARIQRLAARAPAWLAAQDalarlr 616
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 742155991 374 -----QFLESQRL--LMRDMQRMEIVLTSEQlRQVEElkKKDQEEDEQQRLSKR 420
Cdd:PRK04863 617 eqsgeEFEDSQDVteYMQQLLERERELTVER-DELAA--RKQALDEEIERLSQP 667
|
|
| |
