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Conserved domains on  [gi|740227920|ref|WP_038069302|]
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alpha/beta-type small acid-soluble spore protein, partial [Thermoanaerobacterium aotearoense]

Protein Classification

alpha/beta-type small acid-soluble spore protein( domain architecture ID 10447115)

alpha/beta-type small acid-soluble spore protei is a double-stranded DNA-binding protein that causes DNA to change to an A-like conformation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SspA/SspB/SspC/SspD COG5852
Small acid-soluble spore protein SspA/SspB/SspC/SspD (alpha/beta-type) [Cell cycle control, ...
 1-50 8.00e-27

Small acid-soluble spore protein SspA/SspB/SspC/SspD (alpha/beta-type) [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 444554  Cd Length: 70  Bit Score: 91.42  E-value: 8.00e-27
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|
gi 740227920  1 KWKYEIASELGINPPADGYWGTLTSRDCGAVGGHMVRKMIQMAESQIANN 50
Cdd:COG5852  21 QFKYEIAQELGVQLGQDGYWGDLTSRQNGSVGGEMVKRMVQMAEQQLAGG 70
 
Name Accession Description Interval E-value
SspA/SspB/SspC/SspD COG5852
Small acid-soluble spore protein SspA/SspB/SspC/SspD (alpha/beta-type) [Cell cycle control, ...
 1-50 8.00e-27

Small acid-soluble spore protein SspA/SspB/SspC/SspD (alpha/beta-type) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444554  Cd Length: 70  Bit Score: 91.42  E-value: 8.00e-27
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|
gi 740227920  1 KWKYEIASELGINPPADGYWGTLTSRDCGAVGGHMVRKMIQMAESQIANN 50
Cdd:COG5852  21 QFKYEIAQELGVQLGQDGYWGDLTSRQNGSVGGEMVKRMVQMAEQQLAGG 70
SASP pfam00269
Small, acid-soluble spore proteins, alpha/beta type;
1-47 1.55e-26

Small, acid-soluble spore proteins, alpha/beta type;


Pssm-ID: 459739  Cd Length: 58  Bit Score: 90.58  E-value: 1.55e-26
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 740227920   1 KWKYEIASELGINPPADGYWGTLTSRDCGAVGGHMVRKMIQMAESQI 47
Cdd:pfam00269 12 QFKYEVANELGVPLGKDGYNGDLTSRQNGSVGGEMVKKMIEMAEQQL 58
 
Name Accession Description Interval E-value
SspA/SspB/SspC/SspD COG5852
Small acid-soluble spore protein SspA/SspB/SspC/SspD (alpha/beta-type) [Cell cycle control, ...
 1-50 8.00e-27

Small acid-soluble spore protein SspA/SspB/SspC/SspD (alpha/beta-type) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444554  Cd Length: 70  Bit Score: 91.42  E-value: 8.00e-27
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|
gi 740227920  1 KWKYEIASELGINPPADGYWGTLTSRDCGAVGGHMVRKMIQMAESQIANN 50
Cdd:COG5852  21 QFKYEIAQELGVQLGQDGYWGDLTSRQNGSVGGEMVKRMVQMAEQQLAGG 70
SASP pfam00269
Small, acid-soluble spore proteins, alpha/beta type;
1-47 1.55e-26

Small, acid-soluble spore proteins, alpha/beta type;


Pssm-ID: 459739  Cd Length: 58  Bit Score: 90.58  E-value: 1.55e-26
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 740227920   1 KWKYEIASELGINPPADGYWGTLTSRDCGAVGGHMVRKMIQMAESQI 47
Cdd:pfam00269 12 QFKYEVANELGVPLGKDGYNGDLTSRQNGSVGGEMVKKMIEMAEQQL 58
SspF COG5854
Small acid-soluble spore protein SspF (alpha/beta-type) [Cell cycle control, cell division, ...
 3-51 9.65e-16

Small acid-soluble spore protein SspF (alpha/beta-type) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444556  Cd Length: 60  Bit Score: 63.38  E-value: 9.65e-16
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|
gi 740227920  3 KYEIASELGI-NPPADGYWGTLTSRDCGavggHMVRKMIQMAESQIANNG 51
Cdd:COG5854  13 KYELAKELGFyDTVQREGWGGVTSRDCG----NMVKRAIERAEQALAQRN 58
SASP COG5864
Small acid-soluble spore protein SAS2, clostridial type [Cell cycle control, cell division, ...
 1-52 4.12e-14

Small acid-soluble spore protein SAS2, clostridial type [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444566  Cd Length: 67  Bit Score: 59.25  E-value: 4.12e-14
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 740227920  1 KWKYEIASELGINPP-ADGYWGTLTSRDCGAVGGHMVRKMIQMAESQIANNGT 52
Cdd:COG5864  15 KLKYEIAEELGLLDKvEKEGWGSLTARETGRIGGLMTKRKKRLAEKELAERGK 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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