|
Name |
Accession |
Description |
Interval |
E-value |
| PtsA |
COG1080 |
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate ... |
5-575 |
0e+00 |
|
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism];
Pssm-ID: 440698 [Multi-domain] Cd Length: 571 Bit Score: 922.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 5 LKGIAASDGVAVAKAYLLVQPDLSFE--TVTVEDTSAEEARLDAALAASQDELSVIREKAVESLGEEAAAVFDAHLMVLA 82
Cdd:COG1080 1 LKGIAASPGIAIGKAFLLREEDLEVPeyTISPEDVEAEIARLEAALAKAREELEALREKAPEDLGEEEAAIFDAHLLLLE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 83 DPEMTGQIKETIRAKQVNAEAALTEVTGMFIAIFEGMEDnPYMQERAADIRDVTKRVLANLLGKKLPNPATINEESIVVA 162
Cdd:COG1080 81 DPELIEEVEELIREGRYNAEWALKEVIEELAAQFEALDD-EYLRERAADIRDVGRRVLRNLLGVEAPDLSDLPEPVILVA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 163 HDLTPSDTAQLNKKYVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGITGEVVINPTEEQIAEFK 242
Cdd:COG1080 160 HDLTPSDTAQLDPSRVAGFVTDLGGRTSHTAILARSLGIPAVVGLGDALLLVKDGDLVIVDGDAGVVIVNPDEETLAEYR 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 243 AAGEAYAKQKAEWALLKDAQTVTADGKHFELAANIGTPKDVEGVNDNGAEAVGLYRTEFLYMDSQDFPTEDDQYEAYKAV 322
Cdd:COG1080 240 ERQAEYAAERAELARLRDLPAVTLDGVRVELAANIGLPEDAAAALENGAEGVGLFRTEFLFMDRDDLPTEEEQFEAYRAV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 323 LEGMNGKPVVVRTMDIGGDKELPYFDLPKEMNPFLGYRALRISISETgnQMFRTQLRALLRASVHGKLRIMFPMVALLTE 402
Cdd:COG1080 320 AEAMGGRPVTIRTLDIGGDKPLPYLPLPKEENPFLGLRAIRLCLDRP--ELFRTQLRAILRASAHGNLRIMFPMISSVEE 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 403 FRTAKGILEEEKAKLVAEGVAVADDIEVGIMIEIPAAAMLADQFAKEVDFFSIGTNDLIQYTMAADRMNEQVSYLYQPYN 482
Cdd:COG1080 398 LRQAKALLEEAKAELRAEGIPFDEDIPVGIMIEVPAAALIADQLAKEVDFFSIGTNDLIQYTLAVDRGNEKVAYLYDPLH 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 483 PSILRLINNVIKAAHAEGKWAGMCGEMAGDQTAVPLLVGMGLDEFSMSATSVLRTRSLMKKLDTAKMEEYANRALtECST 562
Cdd:COG1080 478 PAVLRLIKMVIDAAHKAGKPVGVCGEMAGDPLATPLLLGLGLDELSMSPSSIPAVKAIIRRLDLAEARALAEKAL-ALDT 556
|
570
....*....|...
gi 739758782 563 MEEVLELSKEYVN 575
Cdd:COG1080 557 AEEVRALLEEFLA 569
|
|
| PTS_I_fam |
TIGR01417 |
phosphoenolpyruvate-protein phosphotransferase; This model recognizes a distinct clade of ... |
5-569 |
0e+00 |
|
phosphoenolpyruvate-protein phosphotransferase; This model recognizes a distinct clade of phophoenolpyruvate (PEP)-dependent enzymes. Most members are known or deduced to function as the phosphoenolpyruvate-protein phosphotransferase (or enzyme I) of PTS sugar transport systems. However, some species with both a member of this family and a homolog of the phosphocarrier protein HPr lack a IIC component able to serve as a permease. An HPr homolog designated NPr has been implicated in the regulation of nitrogen assimilation, which demonstrates that not all phosphotransferase system components are associated directly with PTS transport.
Pssm-ID: 273611 [Multi-domain] Cd Length: 565 Bit Score: 705.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 5 LKGIAASDGVAVAKAYLLVQPDL--SFETVTVEDTSAEEARLDAALAASQDELSVIREKAVESLGEEAAAVFDAHLMVLA 82
Cdd:TIGR01417 1 ISGIGVSPGIAIGKALLLKKPDLviDRKKISASQVDQEISRFLSARAKAKEDLETIKTKAGKTFGQEKAAIFEAHILILE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 83 DPEMTGQIKETIRAKQVNAEAALTEVTGMFIAIFEGMeDNPYMQERAADIRDVTKRVLANLLGKKLPNPATINEESIVVA 162
Cdd:TIGR01417 81 DPELTEEVIELIKKDHKNAEFAAHEVFEGQAKSLEEM-DDEYLKERAADIRDIGNRLLGHLLGVKISDLSEIQDEVILVA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 163 HDLTPSDTAQLNKKYVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGITGEVVINPTEEQIAEFK 242
Cdd:TIGR01417 160 EDLTPSETAQLNLKYVKGFLTDAGGKTSHTAIMARSLEIPAIVGTKSVTSQVKNGDTVIIDGVKGIVIFNPSSETIDKYE 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 243 AAGEAYAKQKAEWALLKDAQTVTADGKHFELAANIGTPKDVEGVNDNGAEAVGLYRTEFLYMDSQDFPTEDDQYEAYKAV 322
Cdd:TIGR01417 240 AKQEAVSSEKAELAKLKDKPAITLDGHQVELAANIGTVDDVEGAERNGGEGIGLFRTEFLYMSRDQLPTEEEQFAAYKTV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 323 LEGMNGKPVVVRTMDIGGDKELPYFDLPKEMNPFLGYRALRISISEtgNQMFRTQLRALLRASVHGKLRIMFPMVALLTE 402
Cdd:TIGR01417 320 LEAMESDAVIVRTLDIGGDKELPYLNFPKEENPFLGYRAIRLALER--EEILRTQLRAILRASAYGKLRIMFPMVATVEE 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 403 FRTAKGILEEEKAKLVAEGVAVADDIEVGIMIEIPAAAMLADQFAKEVDFFSIGTNDLIQYTMAADRMNEQVSYLYQPYN 482
Cdd:TIGR01417 398 IRAVKQELEEEKQELNDEGKAFDENIEVGVMIEIPSAALIADHLAKEVDFFSIGTNDLTQYTLAVDRGNDLISNLYQPYN 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 483 PSILRLINNVIKAAHAEGKWAGMCGEMAGDQTAVPLLVGMGLDEFSMSATSVLRTRSLMKKLDTAKMEEYANRALTEcST 562
Cdd:TIGR01417 478 PAVLRLIKLVIDAAKAEGIWVGMCGEMAGDERAIPLLLGLGLRELSMSASSILRIKMIIRKLNIEECKSLAEKALAQ-PT 556
|
....*..
gi 739758782 563 MEEVLEL 569
Cdd:TIGR01417 557 TEEVHKL 563
|
|
| PRK11177 |
PRK11177 |
phosphoenolpyruvate-protein phosphotransferase PtsI; |
4-575 |
0e+00 |
|
phosphoenolpyruvate-protein phosphotransferase PtsI;
Pssm-ID: 183017 [Multi-domain] Cd Length: 575 Bit Score: 701.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 4 MLKGIAASDGVAVAKAYLLVQPD--LSFETVTVEDTSAEEARLDAALAASQDELSVIREKAVESLGEEAAAVFDAHLMVL 81
Cdd:PRK11177 1 MISGILASPGIAFGKALLLKEDEivINRKKISADQVDQEVERFLSGRAKASAQLEAIKTKAGETFGEEKEAIFEGHIMLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 82 ADPEMTGQIKETIRAKQVNAEAALTEVTGMFIAIFEGMEDnPYMQERAADIRDVTKRVLANLLGKKLPNPATINEESIVV 161
Cdd:PRK11177 81 EDEELEQEIIALIKDKHMTADAAAHSVIEGQAKALEELDD-EYLKERAADVRDIGKRLLKNILGLKIIDLSAIQEEVILV 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 162 AHDLTPSDTAQLNKKYVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGITGEVVINPTEEQIAEF 241
Cdd:PRK11177 160 AADLTPSETAQLNLKKVLGFITDIGGRTSHTSIMARSLELPAIVGTGNITKQVKNGDYLILDAVNNQIYVNPTNEVIEEL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 242 KAAGEAYAKQKAEWALLKDAQTVTADGKHFELAANIGTPKDVEGVNDNGAEAVGLYRTEFLYMDSQDFPTEDDQYEAYKA 321
Cdd:PRK11177 240 KAVQEQYASEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFQAYKA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 322 VLEGMNGKPVVVRTMDIGGDKELPYFDLPKEMNPFLGYRALRISISEtgNQMFRTQLRALLRASVHGKLRIMFPMVALLT 401
Cdd:PRK11177 320 VAEAMGSQAVIVRTMDIGGDKELPYMNLPKEENPFLGWRAIRIAMDR--KEILHDQLRAILRASAFGKLRIMFPMIISVE 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 402 EFRTAKGILEEEKAKLVAEGVAVADDIEVGIMIEIPAAAMLADQFAKEVDFFSIGTNDLIQYTMAADRMNEQVSYLYQPY 481
Cdd:PRK11177 398 EVRELKAEIEILKQELRDEGKAFDESIEIGVMVETPAAAVIARHLAKEVDFFSIGTNDLTQYTLAVDRGNELISHLYNPM 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 482 NPSILRLINNVIKAAHAEGKWAGMCGEMAGDQTAVPLLVGMGLDEFSMSATSVLRTRSLMKKLDTAKMEEYANRALTeCS 561
Cdd:PRK11177 478 SPSVLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKALAEQALA-QP 556
|
570
....*....|....
gi 739758782 562 TMEEVLELSKEYVN 575
Cdd:PRK11177 557 TADELMTLVNKFIE 570
|
|
| PEP-utilizers_C |
pfam02896 |
PEP-utilizing enzyme, PEP-binding domain; This entry represents a TIM barrel domain found at ... |
252-546 |
1.04e-167 |
|
PEP-utilizing enzyme, PEP-binding domain; This entry represents a TIM barrel domain found at the C terminus of a number of PEP (phosphoenolpyruvate)-utilizing proteins. In PPDK (Pyruvate phosphate dikinase) this C-terminal domain has been shown to be a PEP-binding domain.
Pssm-ID: 397163 [Multi-domain] Cd Length: 292 Bit Score: 477.96 E-value: 1.04e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 252 KAEWALLKDAQTVTADGKHFELAANIGTPKDVEGVNDNGAEAVGLYRTEFLYMDSQDFPTEDDQYEAYKAVLEGMNGKPV 331
Cdd:pfam02896 1 KAELGKLKDLPAPTADGTKIKVAANIGTPDDAEAALANGAEGIGLYRTEFLFMDRDELPTEDEQFEAYKGVLEAMNGRPV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 332 VVRTMDIGGDKELPYFDLPKEMNPFLGYRALRISISEtgNQMFRTQLRALLRASVHGKLRIMFPMVALLTEFRTAKGILE 411
Cdd:pfam02896 81 TVRTLDIGGDKELPYLEEPEEMNPFLGWRGIRIGLDR--PELFRTQLRAILRASAFGNLRIMFPMVASVEELREAKAIIE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 412 EEKAKLVAEgVAVADDIEVGIMIEIPAAAMLADQFAKEVDFFSIGTNDLIQYTMAADRMNEQVSYLYQPYNPSILRLINN 491
Cdd:pfam02896 159 EVKEELDAE-VGFDKDIKVGIMIEVPSAALLADQLAKEVDFFSIGTNDLTQYTLAVDRDNERVAYLYDPLHPAVLRLIKE 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 739758782 492 VIKAAHAEGKWAGMCGEMAGDQTAVPLLVGMGLDEFSMSATSVLRTRSLMKKLDT 546
Cdd:pfam02896 238 VIRAAHRHGKWVGICGEMAGDPSAVPLLVGLGLDEFSMSPDSVPRARALLAQIDR 292
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PtsA |
COG1080 |
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate ... |
5-575 |
0e+00 |
|
Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism];
Pssm-ID: 440698 [Multi-domain] Cd Length: 571 Bit Score: 922.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 5 LKGIAASDGVAVAKAYLLVQPDLSFE--TVTVEDTSAEEARLDAALAASQDELSVIREKAVESLGEEAAAVFDAHLMVLA 82
Cdd:COG1080 1 LKGIAASPGIAIGKAFLLREEDLEVPeyTISPEDVEAEIARLEAALAKAREELEALREKAPEDLGEEEAAIFDAHLLLLE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 83 DPEMTGQIKETIRAKQVNAEAALTEVTGMFIAIFEGMEDnPYMQERAADIRDVTKRVLANLLGKKLPNPATINEESIVVA 162
Cdd:COG1080 81 DPELIEEVEELIREGRYNAEWALKEVIEELAAQFEALDD-EYLRERAADIRDVGRRVLRNLLGVEAPDLSDLPEPVILVA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 163 HDLTPSDTAQLNKKYVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGITGEVVINPTEEQIAEFK 242
Cdd:COG1080 160 HDLTPSDTAQLDPSRVAGFVTDLGGRTSHTAILARSLGIPAVVGLGDALLLVKDGDLVIVDGDAGVVIVNPDEETLAEYR 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 243 AAGEAYAKQKAEWALLKDAQTVTADGKHFELAANIGTPKDVEGVNDNGAEAVGLYRTEFLYMDSQDFPTEDDQYEAYKAV 322
Cdd:COG1080 240 ERQAEYAAERAELARLRDLPAVTLDGVRVELAANIGLPEDAAAALENGAEGVGLFRTEFLFMDRDDLPTEEEQFEAYRAV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 323 LEGMNGKPVVVRTMDIGGDKELPYFDLPKEMNPFLGYRALRISISETgnQMFRTQLRALLRASVHGKLRIMFPMVALLTE 402
Cdd:COG1080 320 AEAMGGRPVTIRTLDIGGDKPLPYLPLPKEENPFLGLRAIRLCLDRP--ELFRTQLRAILRASAHGNLRIMFPMISSVEE 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 403 FRTAKGILEEEKAKLVAEGVAVADDIEVGIMIEIPAAAMLADQFAKEVDFFSIGTNDLIQYTMAADRMNEQVSYLYQPYN 482
Cdd:COG1080 398 LRQAKALLEEAKAELRAEGIPFDEDIPVGIMIEVPAAALIADQLAKEVDFFSIGTNDLIQYTLAVDRGNEKVAYLYDPLH 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 483 PSILRLINNVIKAAHAEGKWAGMCGEMAGDQTAVPLLVGMGLDEFSMSATSVLRTRSLMKKLDTAKMEEYANRALtECST 562
Cdd:COG1080 478 PAVLRLIKMVIDAAHKAGKPVGVCGEMAGDPLATPLLLGLGLDELSMSPSSIPAVKAIIRRLDLAEARALAEKAL-ALDT 556
|
570
....*....|...
gi 739758782 563 MEEVLELSKEYVN 575
Cdd:COG1080 557 AEEVRALLEEFLA 569
|
|
| PTS_I_fam |
TIGR01417 |
phosphoenolpyruvate-protein phosphotransferase; This model recognizes a distinct clade of ... |
5-569 |
0e+00 |
|
phosphoenolpyruvate-protein phosphotransferase; This model recognizes a distinct clade of phophoenolpyruvate (PEP)-dependent enzymes. Most members are known or deduced to function as the phosphoenolpyruvate-protein phosphotransferase (or enzyme I) of PTS sugar transport systems. However, some species with both a member of this family and a homolog of the phosphocarrier protein HPr lack a IIC component able to serve as a permease. An HPr homolog designated NPr has been implicated in the regulation of nitrogen assimilation, which demonstrates that not all phosphotransferase system components are associated directly with PTS transport.
Pssm-ID: 273611 [Multi-domain] Cd Length: 565 Bit Score: 705.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 5 LKGIAASDGVAVAKAYLLVQPDL--SFETVTVEDTSAEEARLDAALAASQDELSVIREKAVESLGEEAAAVFDAHLMVLA 82
Cdd:TIGR01417 1 ISGIGVSPGIAIGKALLLKKPDLviDRKKISASQVDQEISRFLSARAKAKEDLETIKTKAGKTFGQEKAAIFEAHILILE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 83 DPEMTGQIKETIRAKQVNAEAALTEVTGMFIAIFEGMeDNPYMQERAADIRDVTKRVLANLLGKKLPNPATINEESIVVA 162
Cdd:TIGR01417 81 DPELTEEVIELIKKDHKNAEFAAHEVFEGQAKSLEEM-DDEYLKERAADIRDIGNRLLGHLLGVKISDLSEIQDEVILVA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 163 HDLTPSDTAQLNKKYVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGITGEVVINPTEEQIAEFK 242
Cdd:TIGR01417 160 EDLTPSETAQLNLKYVKGFLTDAGGKTSHTAIMARSLEIPAIVGTKSVTSQVKNGDTVIIDGVKGIVIFNPSSETIDKYE 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 243 AAGEAYAKQKAEWALLKDAQTVTADGKHFELAANIGTPKDVEGVNDNGAEAVGLYRTEFLYMDSQDFPTEDDQYEAYKAV 322
Cdd:TIGR01417 240 AKQEAVSSEKAELAKLKDKPAITLDGHQVELAANIGTVDDVEGAERNGGEGIGLFRTEFLYMSRDQLPTEEEQFAAYKTV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 323 LEGMNGKPVVVRTMDIGGDKELPYFDLPKEMNPFLGYRALRISISEtgNQMFRTQLRALLRASVHGKLRIMFPMVALLTE 402
Cdd:TIGR01417 320 LEAMESDAVIVRTLDIGGDKELPYLNFPKEENPFLGYRAIRLALER--EEILRTQLRAILRASAYGKLRIMFPMVATVEE 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 403 FRTAKGILEEEKAKLVAEGVAVADDIEVGIMIEIPAAAMLADQFAKEVDFFSIGTNDLIQYTMAADRMNEQVSYLYQPYN 482
Cdd:TIGR01417 398 IRAVKQELEEEKQELNDEGKAFDENIEVGVMIEIPSAALIADHLAKEVDFFSIGTNDLTQYTLAVDRGNDLISNLYQPYN 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 483 PSILRLINNVIKAAHAEGKWAGMCGEMAGDQTAVPLLVGMGLDEFSMSATSVLRTRSLMKKLDTAKMEEYANRALTEcST 562
Cdd:TIGR01417 478 PAVLRLIKLVIDAAKAEGIWVGMCGEMAGDERAIPLLLGLGLRELSMSASSILRIKMIIRKLNIEECKSLAEKALAQ-PT 556
|
....*..
gi 739758782 563 MEEVLEL 569
Cdd:TIGR01417 557 TEEVHKL 563
|
|
| PRK11177 |
PRK11177 |
phosphoenolpyruvate-protein phosphotransferase PtsI; |
4-575 |
0e+00 |
|
phosphoenolpyruvate-protein phosphotransferase PtsI;
Pssm-ID: 183017 [Multi-domain] Cd Length: 575 Bit Score: 701.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 4 MLKGIAASDGVAVAKAYLLVQPD--LSFETVTVEDTSAEEARLDAALAASQDELSVIREKAVESLGEEAAAVFDAHLMVL 81
Cdd:PRK11177 1 MISGILASPGIAFGKALLLKEDEivINRKKISADQVDQEVERFLSGRAKASAQLEAIKTKAGETFGEEKEAIFEGHIMLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 82 ADPEMTGQIKETIRAKQVNAEAALTEVTGMFIAIFEGMEDnPYMQERAADIRDVTKRVLANLLGKKLPNPATINEESIVV 161
Cdd:PRK11177 81 EDEELEQEIIALIKDKHMTADAAAHSVIEGQAKALEELDD-EYLKERAADVRDIGKRLLKNILGLKIIDLSAIQEEVILV 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 162 AHDLTPSDTAQLNKKYVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGITGEVVINPTEEQIAEF 241
Cdd:PRK11177 160 AADLTPSETAQLNLKKVLGFITDIGGRTSHTSIMARSLELPAIVGTGNITKQVKNGDYLILDAVNNQIYVNPTNEVIEEL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 242 KAAGEAYAKQKAEWALLKDAQTVTADGKHFELAANIGTPKDVEGVNDNGAEAVGLYRTEFLYMDSQDFPTEDDQYEAYKA 321
Cdd:PRK11177 240 KAVQEQYASEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFQAYKA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 322 VLEGMNGKPVVVRTMDIGGDKELPYFDLPKEMNPFLGYRALRISISEtgNQMFRTQLRALLRASVHGKLRIMFPMVALLT 401
Cdd:PRK11177 320 VAEAMGSQAVIVRTMDIGGDKELPYMNLPKEENPFLGWRAIRIAMDR--KEILHDQLRAILRASAFGKLRIMFPMIISVE 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 402 EFRTAKGILEEEKAKLVAEGVAVADDIEVGIMIEIPAAAMLADQFAKEVDFFSIGTNDLIQYTMAADRMNEQVSYLYQPY 481
Cdd:PRK11177 398 EVRELKAEIEILKQELRDEGKAFDESIEIGVMVETPAAAVIARHLAKEVDFFSIGTNDLTQYTLAVDRGNELISHLYNPM 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 482 NPSILRLINNVIKAAHAEGKWAGMCGEMAGDQTAVPLLVGMGLDEFSMSATSVLRTRSLMKKLDTAKMEEYANRALTeCS 561
Cdd:PRK11177 478 SPSVLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKALAEQALA-QP 556
|
570
....*....|....
gi 739758782 562 TMEEVLELSKEYVN 575
Cdd:PRK11177 557 TADELMTLVNKFIE 570
|
|
| PEP-utilizers_C |
pfam02896 |
PEP-utilizing enzyme, PEP-binding domain; This entry represents a TIM barrel domain found at ... |
252-546 |
1.04e-167 |
|
PEP-utilizing enzyme, PEP-binding domain; This entry represents a TIM barrel domain found at the C terminus of a number of PEP (phosphoenolpyruvate)-utilizing proteins. In PPDK (Pyruvate phosphate dikinase) this C-terminal domain has been shown to be a PEP-binding domain.
Pssm-ID: 397163 [Multi-domain] Cd Length: 292 Bit Score: 477.96 E-value: 1.04e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 252 KAEWALLKDAQTVTADGKHFELAANIGTPKDVEGVNDNGAEAVGLYRTEFLYMDSQDFPTEDDQYEAYKAVLEGMNGKPV 331
Cdd:pfam02896 1 KAELGKLKDLPAPTADGTKIKVAANIGTPDDAEAALANGAEGIGLYRTEFLFMDRDELPTEDEQFEAYKGVLEAMNGRPV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 332 VVRTMDIGGDKELPYFDLPKEMNPFLGYRALRISISEtgNQMFRTQLRALLRASVHGKLRIMFPMVALLTEFRTAKGILE 411
Cdd:pfam02896 81 TVRTLDIGGDKELPYLEEPEEMNPFLGWRGIRIGLDR--PELFRTQLRAILRASAFGNLRIMFPMVASVEELREAKAIIE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 412 EEKAKLVAEgVAVADDIEVGIMIEIPAAAMLADQFAKEVDFFSIGTNDLIQYTMAADRMNEQVSYLYQPYNPSILRLINN 491
Cdd:pfam02896 159 EVKEELDAE-VGFDKDIKVGIMIEVPSAALLADQLAKEVDFFSIGTNDLTQYTLAVDRDNERVAYLYDPLHPAVLRLIKE 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 739758782 492 VIKAAHAEGKWAGMCGEMAGDQTAVPLLVGMGLDEFSMSATSVLRTRSLMKKLDT 546
Cdd:pfam02896 238 VIRAAHRHGKWVGICGEMAGDPSAVPLLVGLGLDEFSMSPDSVPRARALLAQIDR 292
|
|
| PRK11061 |
PRK11061 |
phosphoenolpyruvate--protein phosphotransferase; |
5-574 |
2.19e-119 |
|
phosphoenolpyruvate--protein phosphotransferase;
Pssm-ID: 182937 [Multi-domain] Cd Length: 748 Bit Score: 370.09 E-value: 2.19e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 5 LKGIAASDGVAVAKAYL-LVQPDLS--FETVTVeDTSAEEARLDAALAASQDELSVIREKAVESLGEEAAAVFDAHLMVL 81
Cdd:PRK11061 171 IRALPASPGVAIAEGWQdATQPLLEqvYPASTL-DPALERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHLL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 82 ADPEMTGQIKETIRAKQVnAEAALTEVTGMFIAIFEGMEDnPYMQERAADIRDVTKRVLANLLGKkLPNPATINEESIVV 161
Cdd:PRK11061 250 NDPRLRRELFAEVDKGSV-AEWAVKQVIEKFAEQFAALSD-NYLRERAGDLRALGQRLLFHLDDS-EQGPNAWPERFILV 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 162 AHDLTPSDTAQLNKKYVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVkDGDVLAVSGITGEVVINPTEEQIAEF 241
Cdd:PRK11061 327 ADELTATLLAELPQDRLAGVVVRDGAANSHAAILVRALGIPTVMGADIQPSLL-HQRLLIVDGYRGELLVDPEPVLLQEY 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 242 KA--AGEAYAKQKAEWALlkDAQTVTADGKHFELAANIGTPKDVEGVNDNGAEAVGLYRTEFLYMDSQDFPTEDDQYEAY 319
Cdd:PRK11061 406 QRliSEEIELSRLAEDDV--NLPAQLKSGERIKVMLNAGLSAEHEEKLGSRVDGVGLYRTEIPFMLQSGFPSEEEQVAQY 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 320 KAVLEGMNGKPVVVRTMDIGGDKELPYFDLPKEmNPFLGYRALRISISETgnQMFRTQLRALLRASV-HGKLRIMFPMVA 398
Cdd:PRK11061 484 QGMLQMFPDKPVTLRTLDIGADKQLPYMPISEE-NPCLGWRGIRITLDQP--EIFLIQVRAMLRANAaTGNLSILLPMVT 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 399 LLTEFRTAKGILEEEKAKLVAE-GVAVADDiEVGIMIEIPAAAMLADQFAKEVDFFSIGTNDLIQYTMAADRMNEQVSYL 477
Cdd:PRK11061 561 SIDEVDEARRLIDRAGREVEEMlGYEIPKP-RIGIMIEVPSMVFMLPHLASRVDFISVGTNDLTQYLLAVDRNNTRVASL 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 478 YQPYNPSILRLINNVIKAAHAEGKWAGMCGEMAGDQTAVPLLVGMGLDEFSMSATSVLRTRSLMKKLDTAKMEEYANRAL 557
Cdd:PRK11061 640 YDSLHPAMLRALKMIADEAEQHGLPVSLCGEMAGDPMGALLLIGLGYRHLSMNGRSVARVKYLLRHIDLAEAENLAQRSL 719
|
570
....*....|....*..
gi 739758782 558 TeCSTMEEVLELSKEYV 574
Cdd:PRK11061 720 E-AQLATEVRHQVAAFM 735
|
|
| PRK06464 |
PRK06464 |
phosphoenolpyruvate synthase; Validated |
180-538 |
7.68e-62 |
|
phosphoenolpyruvate synthase; Validated
Pssm-ID: 235809 [Multi-domain] Cd Length: 795 Bit Score: 218.08 E-value: 7.68e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 180 AFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVS---GITGEVvinptEEQIAEFKAAGEAYakqkaewa 256
Cdd:PRK06464 407 AIVTNRGGRTCHAAIIARELGIPAVVGTGNATEVLKDGQEVTVScaeGDTGYV-----YEGLLEFEVEEVSL-------- 473
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 257 llkDAQTVTAdgkhFELAANIGTPKDVEGVNDNGAEAVGLYRTEFL-----------YMDSQDFPTE------------D 313
Cdd:PRK06464 474 ---EEMPETP----TKIMMNVGNPERAFDFAALPNDGVGLARLEFIinnmigvhplaLLEFDQQDADlkaeieeltagyA 546
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 314 DQYEAYKAVL-EGM-------NGKPVVVRTMD---------IGGDK-ElpyfdlPKEMNPFLGYRALRISISETGNQMFR 375
Cdd:PRK06464 547 SPEEFYVDKLaEGIatvaaafYPKPVIVRLSDfksneyanlIGGERyE------PEEENPMLGFRGASRYLSESFREAFA 620
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 376 TQLRALLRasVHGK-----LRIMFPMVALLTEFRTAKGILEEEkaklvaeGVAV-ADDIEVGIMIEIPAAAMLADQFAKE 449
Cdd:PRK06464 621 LECEAIKR--VREEmgltnVEVMIPFVRTVEEAEKVIELLAEN-------GLKRgENGLKVIMMCEIPSNALLAEEFLEY 691
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 450 VDFFSIGTNDLIQYTMAADRMNEQVSYLYQPYNPSILRLINNVIKAAHAEGKWAGMCG-------EMAGdqtavpLLVGM 522
Cdd:PRK06464 692 FDGFSIGSNDLTQLTLGLDRDSGLVAHLFDERNPAVKKLISMAIKAAKKAGKYVGICGqapsdhpDFAE------WLVEE 765
|
410
....*....|....*...
gi 739758782 523 GLDefSMSAT--SVLRTR 538
Cdd:PRK06464 766 GID--SISLNpdAVVDTW 781
|
|
| PEP-utilizers_N |
pfam05524 |
PEP-utilizing enzyme, N-terminal; |
6-128 |
7.91e-39 |
|
PEP-utilizing enzyme, N-terminal;
Pssm-ID: 461671 [Multi-domain] Cd Length: 125 Bit Score: 138.51 E-value: 7.91e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 6 KGIAASDGVAVAKAYLLVQPDLSF---ETVTVEDTSAEEARLDAALAASQDELSVIREKAVESLGEEAAAVFDAHLMVLA 82
Cdd:pfam05524 1 KGIGASPGIAIGKAVVLEEPELEVpdeREVPADDVEAEIARLEAALEAAREELEALAERAAGELGEEEAAIFEAHLMMLE 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 739758782 83 DPEMTGQIKETIRAKQVNAEAALTEVTGMFIAIFEGMEDnPYMQER 128
Cdd:pfam05524 81 DPELLEEVEELIREGGLNAEAAVKEVVDEFAAMFEAMDD-PYLRER 125
|
|
| PRK11377 |
PRK11377 |
dihydroxyacetone kinase subunit M; Provisional |
33-231 |
1.25e-30 |
|
dihydroxyacetone kinase subunit M; Provisional
Pssm-ID: 183108 [Multi-domain] Cd Length: 473 Bit Score: 124.86 E-value: 1.25e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 33 TVEDTSAEEARLDAALAASQDELSVIREKAVESLGEEAAAVFDAHLMVLADPEMTGQIKETIRAKQVNAEAALTEVTGMF 112
Cdd:PRK11377 275 STLTVEEEQERLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLDDPELLAAASERLQHEHCTAEYAWQQVLKEL 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 113 IAIFEGMEDnPYMQERAADIRDVTKRVLANLLGKKLPNPaTINEESIVVAHDLTPSDTAQLNKKYVKAFVTNIGGRTSHS 192
Cdd:PRK11377 355 SQQYQQLDD-EYLQARYIDVDDLLHRTLVHLTQTKEELP-QFNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPLSHS 432
|
170 180 190
....*....|....*....|....*....|....*....
gi 739758782 193 AIMARTLEIAAVLGTNNITELVKDGDVLAVSGITGEVVI 231
Cdd:PRK11377 433 AIIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRLNR 471
|
|
| PEP-utilizers |
pfam00391 |
PEP-utilizing enzyme, mobile domain; This domain is a "swivelling" beta/beta/alpha domain ... |
154-227 |
1.71e-24 |
|
PEP-utilizing enzyme, mobile domain; This domain is a "swivelling" beta/beta/alpha domain which is thought to be mobile in all proteins known to contain it.
Pssm-ID: 459796 [Multi-domain] Cd Length: 73 Bit Score: 96.71 E-value: 1.71e-24
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 739758782 154 INEESIVVAHDLTPSDTAQLNKkyVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGITG 227
Cdd:pfam00391 2 LPEGVILVAPDTTPSDTAGLDK--AAGIVTERGGMTSHAAIVARELGIPAVVGVGDATILLKEGDLVTVDGSTG 73
|
|
| PpsA |
COG0574 |
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and ... |
152-229 |
1.12e-12 |
|
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism]; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase is part of the Pathway/BioSystem: Gluconeogenesis
Pssm-ID: 440339 [Multi-domain] Cd Length: 455 Bit Score: 70.24 E-value: 1.12e-12
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 739758782 152 ATINEESIVVAHDLTPSDTAQLNKkyVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGITGEV 229
Cdd:COG0574 379 ARFQEGVILVRDETDPDDVPGMKA--AAGIVTERGGMTSHAAIVARELGIPAVVGCGDATRVLKDGDEITVDGTTGEV 454
|
|
| PRK08296 |
PRK08296 |
hypothetical protein; Provisional |
153-231 |
1.03e-11 |
|
hypothetical protein; Provisional
Pssm-ID: 181362 Cd Length: 603 Bit Score: 67.76 E-value: 1.03e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 739758782 153 TINEESIVVAHDLTPSDTAQLNKkyVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGITGEVVI 231
Cdd:PRK08296 525 EVQEGEILVCPVTSPSWAPIFAK--IKATVTDIGGVMSHAAIVCREYGLPAVVGTGNATKRIKTGQRLRVDGTKGVVTI 601
|
|
| PRK06241 |
PRK06241 |
phosphoenolpyruvate synthase; Validated |
178-231 |
1.20e-06 |
|
phosphoenolpyruvate synthase; Validated
Pssm-ID: 235751 [Multi-domain] Cd Length: 871 Bit Score: 51.43 E-value: 1.20e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 739758782 178 VKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGITGEVVI 231
Cdd:PRK06241 815 IKGLVTEVGGLMTHGAVIAREYGIPAVVGVENATKLIKDGQRIRVDGTEGYVEI 868
|
|
| PykA2 |
COG3848 |
Phosphohistidine swiveling domain of PEP-utilizing enzymes [Signal transduction mechanisms]; |
151-229 |
2.98e-06 |
|
Phosphohistidine swiveling domain of PEP-utilizing enzymes [Signal transduction mechanisms];
Pssm-ID: 443058 Cd Length: 321 Bit Score: 49.51 E-value: 2.98e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 739758782 151 PATINEESIVVAHDLTPSDTAQLNKkyVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGITGEV 229
Cdd:COG3848 237 LEKFEEGDILVVPSTDAEFVPAIEK--AAGIITEEGGLTSHAAIVGLELGIPVIVGAEGATEILKDGQVVTVDAERGVV 313
|
|
| PRK06354 |
PRK06354 |
pyruvate kinase; Provisional |
152-229 |
4.32e-04 |
|
pyruvate kinase; Provisional
Pssm-ID: 235784 [Multi-domain] Cd Length: 590 Bit Score: 42.99 E-value: 4.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 152 ATINEESIVVAHdltpsdtaQLNKKYVKAF------VTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGI 225
Cdd:PRK06354 507 AKVNEGDILVTP--------STDADMIPAIekaaaiITEEGGLTSHAAVVGLRLGIPVIVGVKNATSLIKDGQIITVDAA 578
|
....
gi 739758782 226 TGEV 229
Cdd:PRK06354 579 RGVV 582
|
|
| PRK05878 |
PRK05878 |
pyruvate phosphate dikinase; Provisional |
152-229 |
6.93e-04 |
|
pyruvate phosphate dikinase; Provisional
Pssm-ID: 235635 [Multi-domain] Cd Length: 530 Bit Score: 42.42 E-value: 6.93e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 739758782 152 ATINEESIVVAHDLTPSDTAQLNKkyVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVSGITGEV 229
Cdd:PRK05878 376 ADRGEPVILVRDHTRPDDVHGMLA--AQGIVTEVGGATSHAAVVSRELGRVAVVGCGAGVAAALAGKEITVDGYEGEV 451
|
|
| PRK05865 |
PRK05865 |
sugar epimerase family protein; |
147-247 |
1.00e-03 |
|
sugar epimerase family protein;
Pssm-ID: 235630 [Multi-domain] Cd Length: 854 Bit Score: 41.95 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 147 KLPNPATINE---ESIVVAHDLTPSDTAQLNkkYVKAFVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDVLAVS 223
Cdd:PRK05865 751 RIVRPETIDDlqpGEILVAEVTDVGYTAAFC--YAAAVVTELGGPMSHAAVVAREFGFPCVVDAQGATRFLPPGALVEVD 828
|
90 100
....*....|....*....|....
gi 739758782 224 GITGEVvinpteeQIAEFKAAGEA 247
Cdd:PRK05865 829 GATGEI-------HVVELASEDGP 845
|
|
| rimM |
PRK00122 |
16S rRNA-processing protein RimM; Provisional |
212-327 |
6.51e-03 |
|
16S rRNA-processing protein RimM; Provisional
Pssm-ID: 234650 [Multi-domain] Cd Length: 172 Bit Score: 37.81 E-value: 6.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 739758782 212 ELVKDGDVLAVSGITGEVVINPTEEQIAEFKAAGEAYAKQKAEWallkdaQTVT-ADGKHFelaanigtPKDV----EGV 286
Cdd:PRK00122 6 DLLVVGKIVSAHGIKGEVKVKSFTDFPERIFDYGPWLLGKGGEW------QEVEiESGRFH--------KGFLivkfEGV 71
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 739758782 287 ND-NGAEAvglYRTEFLYMDSQDFP-TEDDQYeaYKAVLEGMN 327
Cdd:PRK00122 72 DDrNAAEA---LKGCELFVPRSQLPeLEEDEY--YWHDLIGLE 109
|
|
|