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Conserved domains on  [gi|733386275|ref|YP_009111458|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Asiotmethis jubatus]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-91 1.33e-23

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 85.98  E-value: 1.33e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386275  4 FSVFTSLLVYFSGVYVFSSKRKHLLMVLLSLEYIVLSLFLLIIIYLYSFDYDYFFSIIFLVFSVCEGALGLSILVSMIRS 83
Cdd:MTH00162  2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                ....*...
gi 733386275 84 HGNDFFNS 91
Cdd:MTH00162 82 HGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-91 1.33e-23

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 85.98  E-value: 1.33e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386275  4 FSVFTSLLVYFSGVYVFSSKRKHLLMVLLSLEYIVLSLFLLIIIYLYSFDYDYFFSIIFLVFSVCEGALGLSILVSMIRS 83
Cdd:MTH00162  2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                ....*...
gi 733386275 84 HGNDFFNS 91
Cdd:MTH00162 82 HGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
4-94 1.28e-08

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 47.94  E-value: 1.28e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386275   4 FSVFTSLLVYFSGVYVFSSkRKHLLMVLLSLEYIVLSLFLLIIIYLYSFDYDY--FFSIIFLVFSVCEGALGLSILVSMI 81
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLpqALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|...
gi 733386275  82 RSHGNDFFNSFGL 94
Cdd:pfam00420 80 RTHGTDDVDSLNL 92
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 4-91 1.33e-23

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 85.98  E-value: 1.33e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386275  4 FSVFTSLLVYFSGVYVFSSKRKHLLMVLLSLEYIVLSLFLLIIIYLYSFDYDYFFSIIFLVFSVCEGALGLSILVSMIRS 83
Cdd:MTH00162  2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRS 81


                ....*...
gi 733386275 84 HGNDFFNS 91
Cdd:MTH00162 82 HGNDYFSS 89
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 1-97 4.23e-14

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 61.91  E-value: 4.23e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386275  1 MFSFSVFTSLLVYFSGVYVFSSKRKHLLMVLLSLEYIVLSLFLLIIIYLYSFDYDYFFSIIFLVFSVCEGALGLSILVSM 80
Cdd:MTH00188  1 MFFSMILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSL 80

                        90
                ....*....|....*..
gi 733386275 81 IRSHGNDFFNSFGLSLC 97
Cdd:MTH00188 81 IRSHGSDYVSSLNLIKC 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-97 2.16e-12

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 57.55  E-value: 2.16e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386275  1 MFSFSVFTSLLVYFSGVYVFSSKRKHLLMVLLSLEYIVLSLFLLIIIYLYSFDYDYFFSIIFLVFSVCEGALGLSILVSM 80
Cdd:MTH00149  1 SMFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSL 80

                        90
                ....*....|....*..
gi 733386275 81 IRSHGNDFFNSFGLSLC 97
Cdd:MTH00149 81 IRLHGNDYVSSLSSLKF 97
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 20-97 3.64e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 54.47  E-value: 3.64e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386275 20 FSSKRKHLLMVLLSLEYIVLSLFLLIIIYLYSFDYDYFFS--IIFLVFSVCEGALGLSILVSMIRSHGNDFFNSFGLSLC 97
Cdd:MTH00125 19 LSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmpIILLTFSACEAGTGLALLVATTRTHGSDHLKNLNLLQC 98
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 2-97 5.62e-11

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 53.99  E-value: 5.62e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386275  2 FSFSVFTSLLVYFSGVYVFSSKRKHLLMVLLSLEYIVLSLFLLIIIYLYSFD-YDYFFSIIFLVFSVCEGALGLSILVSM 80
Cdd:MTH00013  1 MMSPLFILSISPFISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLMFANqVNGMLAIVLLTFGACEASLGLSLLVLM 80

                        90
                ....*....|....*..
gi 733386275 81 IRSHGNDFFNSFGLSLC 97
Cdd:MTH00013 81 TRSYGNDMLKSLTSNKC 97
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 24-97 5.94e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 48.81  E-value: 5.94e-09
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 733386275 24 RKHLLMVLLSLEYIVLSLFLLIIIYLYSFDYDYFFS--IIFLVFSVCEGALGLSILVSMIRSHGNDFFNSFGLSLC 97
Cdd:MTH00126 23 RTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAapMLLLAFSACEASAGLALLVATARTHGTDRLQNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
4-94 1.28e-08

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 47.94  E-value: 1.28e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386275   4 FSVFTSLLVYFSGVYVFSSkRKHLLMVLLSLEYIVLSLFLLIIIYLYSFDYDY--FFSIIFLVFSVCEGALGLSILVSMI 81
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLpqALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|...
gi 733386275  82 RSHGNDFFNSFGL 94
Cdd:pfam00420 80 RTHGTDDVDSLNL 92
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-97 2.15e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 47.29  E-value: 2.15e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386275  1 MFSFSVFTSLLVYFSGvyvFSSKRKHLLMVLLSLEYIVLSLFLLIIIYLYSFDYDYFFS--IIFLVFSVCEGALGLSILV 78
Cdd:MTH00067  3 PTYFTFYSAFLLGLMG---LAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSlpMFMLTFSACEASTGLALMV 79

                        90
                ....*....|....*....
gi 733386275 79 SMIRSHGNDFFNSFGLSLC 97
Cdd:MTH00067 80 ATTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 24-97 2.69e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 44.54  E-value: 2.69e-07
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 733386275 24 RKHLLMVLLSLEYIVLSLFLL--IIIYLYSFDYDYFFSIIFLVFSVCEGALGLSILVSMIRSHGNDFFNSFGLSLC 97
Cdd:MTH00107 23 RSHLMSSLLCLEGMMLSLFIMatLTILNTHFTLASMMPIILLVFAACEAAVGLALLVMVSNTYGTDYVQNLNLLQC 98
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 7-94 3.98e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 41.44  E-value: 3.98e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386275  7 FTSLLVYFSGVYVFSSKRKHLLMVLLSLEYIVLSLFLLIIIYLYSFDYDYF--FSIIFLVFSVCEGALGLSILVSMIRSH 84
Cdd:MTH00043  6 IIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNlsFSLLLLTLSACEASIGLSLMVLLSRNH 85

                        90
                ....*....|
gi 733386275 85 GNDFFNSFGL 94
Cdd:MTH00043 86 NSDLVASLNL 95
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 6-95 1.62e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 39.93  E-value: 1.62e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 733386275  6 VFTSLLVYFSGVYVFSSKRKHLLMVLLSLEYIVLSLFLLIIIYLYSFDY--DYFFSIIFLVFSVCEGALGLSILVSMIRS 83
Cdd:MTH00181  2 MFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSssMLMFGLILLTFSACEAVLGLSLLVATNRT 81

                        90
                ....*....|..
gi 733386275 84 HGNDFFNSFGLS 95
Cdd:MTH00181 82 HGSDHLLKFNLL 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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