|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-462 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 682.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 1 MLKIILPTLMLLPTTLLSPPKLMWTNTTMHSLLVATLSLQWLAPSYYPYKNLTQYTGIDQTSSPLLVLSCWLTPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 81 QGHLQHEPPARKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 161 LVAILYLHTQMGTLHLPTLKLHPhilqPTSTQHWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTH----PTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 241 KLGGYGIMRITPLTSPPTNSLlHYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMIL 320
Cdd:MTH00124 237 KLGGYGIIRITLLLPPLSNTL-HYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 321 MISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIIL 400
Cdd:MTH00124 316 MIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIIL 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 726972115 401 TGTATLLTASYTLSMLTTTQRGTLPPHITTLQSSTTREHLLMTLHLLPTLLLILKPELISGP 462
Cdd:MTH00124 396 TGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-461 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 551.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 1 MLKIILPTLMLLPTTLLSPPKLMWTNTTMHSLLVATLSLQWLAPSYYPYKNLTQYTGIDQTSSPLLVLSCWLTPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 81 QGHLQHEPPARKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 161 LVAILYLHTQMGTLHLPTLKLHPHILQPTstqhWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMT----YTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 241 KLGGYGIMRITPLTSPPTNSLLhYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMIL 320
Cdd:MTH00068 237 KLGGYGILRISILLTPLSKELS-YPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 321 MISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIIL 400
Cdd:MTH00068 316 MISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILI 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 726972115 401 TGTATLLTASYTLSMLTTTQRGTLPPHITTLQSSTTREHLLMTLHLLPTLLLILKPELISG 461
Cdd:MTH00068 396 TGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-463 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 543.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 1 MLKIILPTLMLLPTTLLSPPKLMWTNTTMHSLLVATLSLQWLAPSYYPYKNLTQYTGIDQTSSPLLVLSCWLTPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 81 QGHLQHEPPARKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 161 LVAILYLHTQMGTLHLPTLKLHPHILQPTstqhWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNS----WSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 241 KLGGYGIMRITPLTSPPTNSLLhYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMIL 320
Cdd:MTH00110 237 KLGGYGMMRITIILNPLTEFMA-YPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATAL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 321 MISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIIL 400
Cdd:MTH00110 316 MIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIIL 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 726972115 401 TGTATLLTASYTLSMLTTTQRGTLPPHITTLQSSTTREHLLMTLHLLPTLLLILKPELISGPL 463
Cdd:MTH00110 396 MGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPT 458
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-461 |
2.12e-154 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 446.32 E-value: 2.12e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 1 MLKIILPTLMLLPTTLLSPPKLMWTNTTMHSLLVATLSLQWLA-PSYYPYKNLTQYTGIDQTSSPLLVLSCWLTPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 80 SQGHLQHEPPARKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 160 LLVAILYLHTQMGTLHLPTLklhpHILQPTSTQHWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALL 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTL----QYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 240 LKLGGYGIMRITPLTSPPTNSLLhYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMI 319
Cdd:MTH00127 237 LKLGGYGMMRMMVMLDPLTKELS-YPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 320 LMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTII 399
Cdd:MTH00127 316 LMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLA 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 726972115 400 LTGTATLLTASYTLSMLTTTQRGTLPPHITTLQSSTTREHLLMTLHLLPTLLLILKPELISG 461
Cdd:MTH00127 396 LTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-459 |
8.89e-150 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 433.98 E-value: 8.89e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 3 KIILPTLMLLPTTLLSPPKLMWTNTTMHSLLVATLSLQWLAPSY-YPYKNLTQYTGIDQTSSPLLVLSCWLTPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSeVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 82 GHLQHEPPARKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 162 VAILYLHTQMGTLHLPtlklhphILQPTSTQHWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLK 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLY-------ILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 242 LGGYGIMRITPLTSPPTNSLLhYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILM 321
Cdd:MTH00206 234 LGGYGMMRIILILGPSTKLSS-YFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLM 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 322 ISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIILT 401
Cdd:MTH00206 313 IAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLL 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 726972115 402 GTATLLTASYTLSMLTTTQRGTLPPHITTLQSSTTREHLLMTLHLLPTLLLILKPELI 459
Cdd:MTH00206 393 GLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
3.73e-134 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 394.73 E-value: 3.73e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 1 MLKIILPTLMLLPTTLLSPPKLMWTNTTMHSLLVATLSLQWLAPSYY-PYKNLTQYTGIDQTSSPLLVLSCWLTPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSsSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 80 SQGHLQHEPPARKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 160 LLVAILYLHTQMGTLHLPTLKLHPHILQPTSTqhwSPLLLNIALLmAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALL 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNS---SSIWWIFCIL-AFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAIL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 240 LKLGGYGIMRITPLTSPPTNSLLHYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMI 319
Cdd:MTH00044 237 LKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 320 LMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTII 399
Cdd:MTH00044 317 LMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFP 396
|
410 420 430
....*....|....*....|....*....|....*....
gi 726972115 400 LTGTATLLTASYTLSMLTTTQRGTLPPHITTLQSSTTRE 438
Cdd:MTH00044 397 IIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSRE 435
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
29-438 |
1.82e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 333.66 E-value: 1.82e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 29 MHSLLVATLSLQWLAPSYYPYKNLTQYTGIDQTSSPLLVLSCWLTPLMILASQGHLQHEPPARKQIFTMALIMVqpLIIL 108
Cdd:MTH00163 25 QSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNYSNLFLFLILFLLI--FLLL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 109 AFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLhphilqp 188
Cdd:MTH00163 103 TFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNF------- 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 189 tstQHWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPpTNSLLHYPFIT 268
Cdd:MTH00163 176 ---FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK-LGLKFNYIWIS 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 269 LALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILL 348
Cdd:MTH00163 252 ISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLL 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 349 LTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIILTGTATLLTASYTLSMLTTTQRGTLPPHI 428
Cdd:MTH00163 332 INKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYSYSQHGKYYSGL 411
|
410
....*....|
gi 726972115 429 TTLQSSTTRE 438
Cdd:MTH00163 412 YSCSSGKVRE 421
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
59-422 |
1.69e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 313.07 E-value: 1.69e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 59 DQTSSPLLVLSCWLTPLMILASQGHLqhEPPARKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRWGS 138
Cdd:MTH00205 56 DSLSLPLIMLSFWISLLMVLASYKVF--KSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGY 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 139 QPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLptlklhpHILQPTSTQHWSPLLLNIALLMAFMVKAPLYGLHL 218
Cdd:MTH00205 134 QPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSM-------FFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHL 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 219 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPpTNSLLHYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSH 298
Cdd:MTH00205 207 WLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYK-LNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGH 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 299 MGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTT 378
Cdd:MTH00205 286 MGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSL 365
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 726972115 379 NLMAELSIMVALFNWSPPTIILTGTATLLTASYTLSMLTTTQRG 422
Cdd:MTH00205 366 NLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHG 409
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-438 |
5.72e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 310.62 E-value: 5.72e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 37 LSLQWLAPSYYPYKNLTQYTGIDQTSSPLLVLSCWLTPLMILASQGHLQHEppARKQIFTMALIMVQPLIILAFSTTELM 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLR--NKSSSFSLLVLLLCLILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 117 LFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLhphilqpTSTQHWSP 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISS-------LRKLLSSM 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 197 LLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPpTNSLLHYPFITLALWGALM 276
Cdd:MTH00150 152 GLWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSL-SSSSFSIFLISLSLWGGVL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 277 TSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPL 356
Cdd:MTH00150 231 TSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLML 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 357 LPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIILTGTATLLTASYTLSMLTTTQRGTLPPHITTLQSSTT 436
Cdd:MTH00150 311 YPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKS 390
|
..
gi 726972115 437 RE 438
Cdd:MTH00150 391 SE 392
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-460 |
1.57e-99 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 305.90 E-value: 1.57e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 1 MLKIILPTLMLLPTTLLSPpKLMWTNTTMHSLLVATLSLQWLAPSYYPYKNLTQYTGIDQTSSPLLVLSCWLTPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 81 QGHLQHEppARKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 161 LVAILYLHTQMGTLHLPTLKLHPHILQPTStqhwsplLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLMN-------LWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 241 KLGGYGIMRITPLTsPPTNSLLHYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMIL 320
Cdd:MTH00014 231 KLGGYGLLRMSSLF-MHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAM 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 321 MISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIIL 400
Cdd:MTH00014 310 MIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAIL 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 401 TGTATLLTASYTLSMLTTTQRGTLPPHITTLQSSTTREHLLMTLHLLPTLLLILKPELIS 460
Cdd:MTH00014 390 LAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-405 |
1.25e-78 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 246.46 E-value: 1.25e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 113 TELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLHPHILQPTSTQ 192
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 193 hwspLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLlHYPFITLALW 272
Cdd:pfam00361 82 ----LLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFI-QQILLILAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 273 GALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLA-NTNYERTHSRILLLTR 351
Cdd:pfam00361 157 SMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYG 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 726972115 352 GLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIILTGTAT 405
Cdd:pfam00361 237 GLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
57-438 |
8.24e-78 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 250.77 E-value: 8.24e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 57 GIDQTSSPLLVLSCWLTPLMILASQGHLQHEPPArkqiFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRW 136
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILASWNEIKKRPKL----YYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 137 GSqPERLSAGIYLLFYTLISSLPLLVAILYL--HTQMGTLHLPTLKLHPhilQPTSTQHWspllLNIALLMAFMVKAPLY 214
Cdd:COG1008 155 GG-ERRIYAAIKFFLYTLAGSLLMLVAILALyfLAGALTFDIAELAAAP---LPLTAQLL----LFLAFFIAFAVKVPMF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 215 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT-PLTsPPTNSLLHYPFITLALWGALMTSSICLRQIDLKSLIAY 293
Cdd:COG1008 227 PFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFAlPLF-PEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 294 SSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMA 373
Cdd:COG1008 306 SSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLG 385
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 726972115 374 LPPTTNLMAELSIMVALFNWSPPTIILTGTATLLTASYTLSMLtttQR---GTLPPHITTLQSSTTRE 438
Cdd:COG1008 386 LPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY---QRvffGPLKEELAELPDLNPRE 450
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
57-415 |
2.52e-69 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 228.55 E-value: 2.52e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 57 GIDQTSSPLLVLSCWLTPLMILASQGHLQHeppaRKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRW 136
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 137 GSqPERLSAGIYLLFYTLISSLPLLVAILYL----HTQMGTLHLPTLKLHPhilQPTSTQHWspllLNIALLMAFMVKAP 212
Cdd:PRK05846 155 GG-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLLNLP---LPPGVQYW----LFLAFFIAFAVKMP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 213 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT-PLtSPPTNSLLHYPFITLALWGALMTSSICLRQIDLKSLI 291
Cdd:PRK05846 227 MFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSlPL-FPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 292 AYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTN 371
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 726972115 372 MALPPTTNLMAELSIMVALFNWSPPTIILTGTATLLTASYTLSM 415
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWL 429
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-416 |
7.36e-69 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 227.13 E-value: 7.36e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 57 GIDQTSSPLLVLSCWLTPLMILASQghlqHEPPARKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASW----ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 137 GSqPERLSAGIYLLFYTLISSLPLLVAILYLHTQMG-TLHLPTLKLHPHilqPTSTQHWspllLNIALLMAFMVKAPLYG 215
Cdd:TIGR01972 150 GG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLNLPL---PFGVQTW----LFLAFFIAFAVKVPLFP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 216 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHYPFITLALWGALMTSSICLRQIDLKSLIAYSS 295
Cdd:TIGR01972 222 LHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 296 VSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALP 375
Cdd:TIGR01972 302 ISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 726972115 376 PTTNLMAELSIMVALFNWSPPTIILTGTATLLTASYTLSML 416
Cdd:TIGR01972 382 GTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
22-415 |
4.17e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 209.53 E-value: 4.17e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 22 LMWTNTTMHSLLVATLSLQWLAPSYYPYKNLTQYTGIDQTSSPLLVLSCWLTPLMILASQGHLQHeppaRKQIFTMALIM 101
Cdd:MTH00204 45 VLWGAFDGEGQFQFINLIEWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLF 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 102 VQPLIILAFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKL 181
Cdd:MTH00204 121 LEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLN 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 182 hphILQPTSTQHWspllLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT-PLTspPTNS 260
Cdd:MTH00204 201 ---IKLPLSIQKW----LLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLF--PAAS 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 261 LLHYPFITL-----ALWGALMTSsiclRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLA 335
Cdd:MTH00204 272 EYFAPLIVMlsviaVIYGSLTTC----RQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAV 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 336 NTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIILTGTATLLTASYTLSM 415
Cdd:MTH00204 348 TFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-413 |
2.76e-56 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 194.37 E-value: 2.76e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 58 IDQTSSPLLVLSCWLTPLMILASQGHLQHEPPArkqiFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRWG 137
Cdd:MTH00226 100 VDGISIYFIILTGFIVPCSILISWHSVKYLTKS----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 138 SQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLHPHILqPTSTQHWspLLLNIALLMAfmVKAPLYGLH 217
Cdd:MTH00226 176 SREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVV-SEQTQKW--IFLGIFLAMA--VKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 218 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHYPFITLALWGALMTSSICLRQIDLKSLIAYSSVS 297
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 298 HMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPT 377
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*.
gi 726972115 378 TNLMAELSIMVALFNWSPPTIILTGTATLLTASYTL 413
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-415 |
7.71e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 187.57 E-value: 7.71e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 57 GIDQTSSPLLVLSCWLTPLMILASQGHLQHeppaRKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRW 136
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 137 GSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLH---LPTLKLHPHIlqptstQHWspllLNIALLMAFMVKAPL 213
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDyqaLCCLKIEKEL------QYF----IFLGFFLSLAIKIPK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 214 YGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT-PLTspPTNSLLHYPFI-TLALWGALMTSSICLRQIDLKSLI 291
Cdd:MTH00217 223 IPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSwPLL--PEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRII 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 292 AYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTN 371
Cdd:MTH00217 301 AYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLAN 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 726972115 372 MALPPTTNLMAELSIMVALFNWSPPTIILTGTATLLTASYTLSM 415
Cdd:MTH00217 381 ASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
94-417 |
7.18e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 163.92 E-value: 7.18e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 94 IFTMALIMvqpLIILAFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVaILYLHTQMGT 173
Cdd:MTH00094 66 ILSNLLIL---ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLF-VYLKNFFFFS 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 174 LHLPTLKLHphilqptstqhwspLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRItpl 253
Cdd:MTH00094 142 LCYFDFFLS--------------WEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI--- 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 254 tSPPTNSLLHYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFC 333
Cdd:MTH00094 205 -LGSLNFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFY 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 334 LANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIILTGTATLLTASYTL 413
Cdd:MTH00094 284 LIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSL 363
|
....
gi 726972115 414 SMLT 417
Cdd:MTH00094 364 FLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
57-416 |
4.23e-41 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 153.26 E-value: 4.23e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 57 GIDQTSSPLLVLSCWLTPLMILASQgHLQHEPparkQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRW 136
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASW-KVTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIW 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 137 GSQpERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLP----TLKLHPHILQptstqhwspLLLNIALLMAFMVKAP 212
Cdd:PRK12561 131 GGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDlaelGAKSYPLALE---------LLLYAGFLIAFGVKLP 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 213 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHYPFITLA----LWGALMTssicLRQIDLK 288
Cdd:PRK12561 201 IFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGvvniIYGALNA----FAQDNVK 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 289 SLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLAN 368
Cdd:PRK12561 277 RRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASS 356
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 726972115 369 LTNMALPPTTNLMAELSIMVALFN---WSPP----TIILTGTATLLTASYTLSML 416
Cdd:PRK12561 357 MASLALPGMSGFVSELTVFLGITSsdvYSSTfrtiTILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-407 |
1.44e-39 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 147.60 E-value: 1.44e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 58 IDQTSSPLLVLSCWLTPLMILASQGHLQHEPPARK-----QIFTMALImvqpliiLAFSTTELMLFYISFEATLIPTLVL 132
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRfyplfLLLLAGMN-------GAFLTGDLFNLFVFFEVMLLASYGL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 133 ITrWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLHphilqptsTQHWSPLLLNIALLM---AFMV 209
Cdd:COG0651 147 VA-LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR--------LAELDPGLLLAAFALllvGFGI 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 210 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI-TPLTSPPTNSLLHYPFITLALWGALMTSSICLRQIDLK 288
Cdd:COG0651 218 KAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVlTLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 289 SLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLAN 368
Cdd:COG0651 298 RLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGA 377
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 726972115 369 LTNMALPPTTNLMAELSIMVALFN----WSPPTIILTGTATLL 407
Cdd:COG0651 378 LALAGLPPLSGFVSKWLLLQAALEagawLLAAVLLLSSLLTLA 420
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-431 |
1.80e-38 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 146.00 E-value: 1.80e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 57 GIDQTSSPLLVLSCWLTPLMILASQGHLQheppaRKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRW 136
Cdd:PRK06473 76 GVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 137 GSQpERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLHPHILqPTSTQhwspLLLNIALLMAFMVKAPLYGL 216
Cdd:PRK06473 151 GGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTL-PLSTQ----LLLLAPILVGFGIKIPLVPF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 217 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHYPFITLALWGALMTSSICLRQIDLKSLIAYSSV 296
Cdd:PRK06473 225 HTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 297 SHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL---QPLLPLMATWWLLANLTNMA 373
Cdd:PRK06473 305 GHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAG 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 726972115 374 LPPTTNLMAELSIMVALFNWSPPTIILTGTATLLTASYTLSMLTTTQRGTLPPHITTL 431
Cdd:PRK06473 385 IPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNL 442
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-416 |
6.22e-35 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 136.37 E-value: 6.22e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 45 SYYPYKNLTQYTGIDQTSSPLLVLSCWLTPLMILASQghlqhePPARK-QIFTMALIMVQPLIILAFSTTELMLFYISFE 123
Cdd:PRK02546 72 SWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 124 ATLIPTLVLITRWGSQpERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTlhlPTLKLHPHILQ--PTSTQhwspLLLNI 201
Cdd:PRK02546 146 LELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDT---PTFDMTALAAKdfGLGFQ----LLCYA 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 202 ALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHYPFITLALWGALMTSSIC 281
Cdd:PRK02546 218 GLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTS 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 282 LRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMA 361
Cdd:PRK02546 298 FAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMF 377
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 726972115 362 TWWLLANLTNMALPPTTNLMAELSIMVALFN---WSPP----TIILTGTATLLTASYTLSML 416
Cdd:PRK02546 378 AMWTACSLASLALPGMSGFVAELMVFVGFATsdaYTLPfrvvVVFLAAVGVILTPIYLLSML 439
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-416 |
1.01e-31 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 126.98 E-value: 1.01e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 57 GIDQTSSPLLVLSCWLTPLMILASQghlqhePPAR--KQIFTMALIMVQPLIILaFSTTELMLFYISFEATLIPTLVLIT 134
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAW------PVTRnsRLFYFLMLAMYSGQIGL-FSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 135 RWGSQpERLSAGIYLLFYTLISSLPLLVAILylhtQMG-------TLHLPTL--KLHPHILQptstqhwspLLLNIALLM 205
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLIGVL----GMGlygsnepTLNFETLanQSYPVALE---------ILFYIGFLI 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 206 AFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHYPFITLALWGALMTSSICLRQI 285
Cdd:CHL00011 220 AYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQR 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 286 DLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWL 365
Cdd:CHL00011 300 NLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFS 379
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 726972115 366 LANLTNMALPPTTNLMAELSIMVALF---NWSP-PTIILT---GTATLLTASYTLSML 416
Cdd:CHL00011 380 SFSMASLALPGMSGFVAELIVFFGIItsqKYLLmPKILITfvmAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-424 |
3.90e-30 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 122.51 E-value: 3.90e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 57 GIDQTSSPLLVLSCWLTPLMILASQghlqhEPPARKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRW 136
Cdd:PRK07363 76 GVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 137 GSQpERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLHPHILqPTSTQhwspLLLNIALLMAFMVKAPLYGL 216
Cdd:PRK07363 151 GGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNL-SLNTQ----LILLTGLLLGFGIKIPLVPL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 217 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHypfITLALWGA---LMTSSICLRQIDLKSLIAY 293
Cdd:PRK07363 225 HTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVA---PGLAIIGTisvIYGALSAIAQKDIKRMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 294 SSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL-QPL--LPLMATWWLLANLT 370
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMA 381
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 726972115 371 NMALPPTTNLMAELSIMVALFNWSPPTIILTGTATLLTASYTLSMLTTTQRGTL 424
Cdd:PRK07363 382 SAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRL 435
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-400 |
3.85e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 98.89 E-value: 3.85e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 58 IDQTSSPLLVLSCWLTPLMILASQGHLQHEppARKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 138 SQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLHPHILQPTSTQHWS---PLLLNIALLM---AFMVKA 211
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGLAgnpPLALGVALALalwAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 212 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRI------TPLTSPPTNSLLHYPFITLALWGALMTSSICLRQI 285
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 286 DLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWL 365
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350
....*....|....*....|....*....|....*
gi 726972115 366 LANLTNMALPPTTNLMAELSIMVALFNWSPPTIIL 400
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPAL 432
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-411 |
2.49e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 93.41 E-value: 2.49e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 109 AFSTTELMLFYISFEATLIPTLVLITRWGSqPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLhlpTLKLHPHILQP 188
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLSSYALVAMGGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTL---NMADLAGALAE 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 189 TSTqhwspllLNIAL---LMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRIT---PLTSPPTNSLL 262
Cdd:PRK08375 198 NPT-------VVTAFgfvLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvFGGDFRFALGL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 263 HYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERT 342
Cdd:PRK08375 271 GWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTY 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 343 HSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFN-WSPPTIILTGTATLLTASY 411
Cdd:PRK08375 351 GTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
2.63e-19 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 82.96 E-value: 2.63e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 1 MLKIILPTLMLLPTTLLSPPKLMWTNTTMHSLLVATLSLQWL-APSYYPYKNLTQYTGIDQTSSPLLVLSCWLTPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLnNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 726972115 80 SQGHLQHEPPARKQIFTMALIMVQPLIILA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-408 |
5.76e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 76.93 E-value: 5.76e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 108 LAFSTTELMLFYISFEATLIPTLVLITRWGSqPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLHPHILq 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTLGAT-AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDEL- 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 188 PTSTQhwspLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRitpltsppTNSLL--HYP 265
Cdd:PRK12665 204 PSGTR----TALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIR--------THTLLfpGGG 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 266 FITLALWGALMTSSI----CLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYER 341
Cdd:PRK12665 272 LDTLLMVVALLTMVVgilgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQ 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 726972115 342 THSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVA-LFNWSPPTIILTGTAT---LLT 408
Cdd:PRK12665 352 AGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVAGGVvtsLLT 422
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-416 |
8.93e-15 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 76.73 E-value: 8.93e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 115 LMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLHPhilqPTSTQHW 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAA----PTILSSP 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 195 SPLLLNIALLMAFMVKAPLYGLHLWLPKAhVEAPI-------------AGSmllaalllklggYGIMRITPL--TSPPTN 259
Cdd:COG1009 209 LLTLILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTpvsallhaatmvkAGV------------YLLARLSPLfaLSPVWL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 260 SLLhypfITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQthwSYSGAMILMISHGLTSSMLFCLANTNY 339
Cdd:COG1009 276 TVV----AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVI 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 340 ERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIILTGTATL---LTASYTLSML 416
Cdd:COG1009 349 HATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLF 428
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
57-391 |
1.31e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 76.31 E-value: 1.31e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 57 GIDQTSSPLLVLSCWLTPLMILASQGHLQH-EPPARKQI---FTMALIMVQPLIILAFSTTELMLFYisfEATLIPTLVL 132
Cdd:PRK08667 74 HIDRLAAFFIILIGLVSLCVAIYSLGYNEHmSSNERANLlsaLTALFILSMLGVVASANTFSFLFFW---EIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 133 ITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLHPHILQptstqhwsplLLNIALLMAFMVKAP 212
Cdd:PRK08667 151 VMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILS----------LVFLLLFLGFGIKAG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 213 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTnslLHYPFITLAL--WGALMTSSICLRQIDLKSL 290
Cdd:PRK08667 221 IIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPE---LWWGVLILLAgsISALLGVIYALKEHDLKGL 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 291 IAYSSVSHMGL--------VIAACMIQ---THWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPL 359
Cdd:PRK08667 298 LAYSSIENIGIilmgiglyVIFGVYGLdtlALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPY 377
|
330 340 350
....*....|....*....|....*....|..
gi 726972115 360 MATWWLLANLTNMALPPTTNLMAELSIMVALF 391
Cdd:PRK08667 378 TSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
107-349 |
3.82e-14 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 73.80 E-value: 3.82e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 107 ILAFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLptlklhphil 186
Cdd:MTH00062 85 ILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNF---------- 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 187 qptstQHWSP-----LLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPptNSL 261
Cdd:MTH00062 155 -----SDWGSddsvsLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFS--GSF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 262 LHYPFITLALWGALMTSSicLRQIDLKSLIAYSSVSHMgLVIAACMIQTHWSYSG-AMILMISHGLTSSMLFCLANTNYE 340
Cdd:MTH00062 228 LGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINlSFFYCLGHGLSAGLVFLLLWCFYE 304
|
....*....
gi 726972115 341 RTHSRILLL 349
Cdd:MTH00062 305 VSGSRNWVL 313
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
114-377 |
1.13e-13 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 73.54 E-value: 1.13e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 114 ELMLFYISFEATLIPTLVLITRWGSQPErlSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTlklhphILQPTSTQH 193
Cdd:PRK12650 131 DVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSG------ILHSDVWAE 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 194 WSPLLLNIALL--MAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSppTNSLLHYPFITLAL 271
Cdd:PRK12650 203 KPGLTTVVAVLiaVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFH--DVAVWNWLLIIVGM 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 272 WGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTR 351
Cdd:PRK12650 281 ITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLG 360
|
250 260
....*....|....*....|....*.
gi 726972115 352 GLQPLLPLMATWWLLANLTNMALPPT 377
Cdd:PRK12650 361 SLWRRMPFTFVSVTIAALSMAAVPPL 386
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-411 |
2.96e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 71.52 E-value: 2.96e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 89 PARKQIFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITrWGSQPERLSAGIYLLFYTLISSLPLLVAILYLH 168
Cdd:PRK07234 90 SAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVY 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 169 TQMGTLHLPTLKLHPhilqPTStqhwsplllnIALL-MAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGI 247
Cdd:PRK07234 169 QANGTFAFSGLATAD----PEA----------FALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 248 MRITPLTSPPtnsllhYPFITL-ALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIqthwsysgAMILMISHGL 326
Cdd:PRK07234 235 VRCALDVPGL------DLIVRIfGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 327 TSSMLFCLANTNYERTHSRILLLTRGLQPLLPLmatwwLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIILtgtATL 406
Cdd:PRK07234 301 VKSTLFLCAGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNL---AAV 372
|
....*
gi 726972115 407 LTASY 411
Cdd:PRK07234 373 GTAAS 377
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
196-400 |
3.34e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 71.50 E-value: 3.34e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 196 PLLLNIA---LLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTS-PPTNSLLHYPFITLAL 271
Cdd:PRK06458 210 PTLMKLAfvfLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFPGRLLLIFGL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 272 WGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTR 351
Cdd:PRK06458 290 LSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIR 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 726972115 352 GLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSP--PTIIL 400
Cdd:PRK06458 370 GLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPllIAILL 420
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
94-395 |
3.24e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 68.24 E-value: 3.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 94 IFTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRWGSQpERLSAGIYLLFYTLISSLPLLVAILYLHT---- 169
Cdd:PRK08676 103 VFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMIFAFIGLIFLFSltrq 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 170 --QMGTLHLPTLKLHPHILQPTSTqhwspLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGI 247
Cdd:PRK08676 182 alGTGTLNWTELAAHASLLSPSVL-----GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGI 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 248 MRITPLT------SPPTNSLLHYPFITLALWGALMtssicLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILM 321
Cdd:PRK08676 257 LRLSALLrqsgaaEQFSNVLIGLGIFSIAVAAFSM-----LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHM 331
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 726972115 322 ISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSP 395
Cdd:PRK08676 332 LAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISV 405
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
95-375 |
1.32e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 66.70 E-value: 1.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 95 FTMALIMVQPLIILAFSTTELMlfYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTL 174
Cdd:PRK12646 114 FYLTLFMFSMIGIVLSDNTILM--YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 175 HLPTLKLHPHILqptSTQHWSPLLLNIALLMAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITPL 253
Cdd:PRK12646 192 NITEILGQADHI---KNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 254 TSppTNSLLHYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYS--------------GAMI 319
Cdd:PRK12646 267 LG--LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHqqdaiasiyvfvlfAALF 344
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 726972115 320 LMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALP 375
Cdd:PRK12646 345 HLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 400
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
98-412 |
1.61e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 66.27 E-value: 1.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 98 ALIMVQPLIILAFSTT-ELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHL 176
Cdd:PRK08376 125 TLILLLELGMLGMAITgDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNM 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 177 PTLKlHPHILQPTSTQHWSPLLLNIALLMafmvKAPLYGLHLWLPKAHVEAPiaGSMLLAALLLKLGG-YGIMRITPLTS 255
Cdd:PRK08376 205 AYLA-VKMSENPTVVAKIALALFIAGLAM----KSGAVPVHMWLPDAYPAAP--SSISAMLLVIKQAGlYALARVLFSIY 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 256 PPTNSLLHYPF--ITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLV-------IAACMIQTHWSY-----SGAMILM 321
Cdd:PRK08376 278 GPAINLATVGWviIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMllglgvgLAALGDPAMASYgeialAGGIYHI 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 322 ISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIM--VALFNWSPPTII 399
Cdd:PRK08376 358 VNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFNPILGVIA 437
|
330
....*....|...
gi 726972115 400 LTGTAtLLTASYT 412
Cdd:PRK08376 438 MIGSV-LTLASFV 449
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
95-332 |
2.27e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 65.79 E-value: 2.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 95 FTMALIMVQPLIILAFSTTELMLFYISFEATLIPTLVLITRwGSQPERLSAGIYLLFyTLISSLPLLVAILYLHTQMGTL 174
Cdd:PRK08668 100 FNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTF 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 175 HLPTLKlhPHILQPTSTQhwSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGI---MRIT 251
Cdd:PRK08668 178 DFADIS--QGLINDTSTG--FALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFllvLYVL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 252 PLTSPPTN-------SLLHYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISH 324
Cdd:PRK08668 254 PGTKLFSEfgtyrgvPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNH 333
|
....*...
gi 726972115 325 GLTSSMLF 332
Cdd:PRK08668 334 ALFKGLFF 341
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-391 |
7.19e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 64.20 E-value: 7.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 106 IILAFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFyTLISSLPLLVAILYLHTQMGTLHLPTLKLHphI 185
Cdd:PRK07691 121 VNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADISVK--I 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 186 LQPTSTQhwSPLLLNIALL--MAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLH 263
Cdd:PRK07691 198 AELSAGQ--TGLITVVAILflFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTH 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 264 YPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTH 343
Cdd:PRK07691 276 YLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITG 355
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 726972115 344 SRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALF 391
Cdd:PRK07691 356 TTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTF 403
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
155-418 |
1.10e-10 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 63.63 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 155 ISSLPLLVAILYLHTQMGTLHLPTLKLHPHILQPTSTQhwspllLNIALLM-AFMVKAPLYGLHLWLPKAHVEAPIAGSM 233
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQ------VGLALLIfGLAVEAELFPLNAWAPDAYQAAPHPITV 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 234 LLAALLLKLGGYGIMRITPLTSPPT--NSLLHYpFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTH 311
Cdd:PRK08377 243 MFSAFVVKAGLYAMARILYLMQNANgwSSVLKL-VIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQ 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 312 WSYSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALF 391
Cdd:PRK08377 322 AGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGL 401
|
250 260 270
....*....|....*....|....*....|.
gi 726972115 392 N----WSpptIILTGTATLLTASYTLSMLTT 418
Cdd:PRK08377 402 SagytWP---VALVLGASVVEAVYYFRLIHT 429
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-376 |
1.80e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 62.66 E-value: 1.80e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 109 AFSTTELMLFYISFEATLIPTLVLITrWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPtlklhpHILQP 188
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMA------HIAMR 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 189 TSTQHWSPLLLNIALLM--AFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHyPF 266
Cdd:PRK12663 197 LNDMGDTATLTTIALLFllAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLH-PL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 267 ITLALWGALMTSSI-CLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSR 345
Cdd:PRK12663 275 LATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYR 354
|
250 260 270
....*....|....*....|....*....|.
gi 726972115 346 ILLLTRGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK12663 355 SLQYLGGLYRKEPLFGALFLILIFAIGGLPP 385
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-406 |
2.50e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 62.63 E-value: 2.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 115 LMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLHPHILQPtstqhw 194
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDVIRE------ 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 195 SPLLLNIALLM---AFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITPltspptnSLLHYP--FIT 268
Cdd:PRK12647 191 HPLYLAILLLVlggAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLARLNP-------VLGGTPlwQTI 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 269 LALWGA---LMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYERTHSR 345
Cdd:PRK12647 262 LPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTR 341
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 726972115 346 ILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIILTGTATL 406
Cdd:PRK12647 342 DITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-415 |
2.89e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 62.14 E-value: 2.89e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 106 IILAFSTtELMLFYISFEATLIPTLVLITrWGSQPERLSAGIYLLFYTLISSLPL-LVAILYLHTQMGTLHLptlklhph 184
Cdd:PRK06589 130 VLIALSS-DLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDF-------- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 185 ilQPTSTQHWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHY 264
Cdd:PRK06589 200 --VSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIF 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 265 P----FITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNYE 340
Cdd:PRK06589 278 AefnwLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYS 357
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 726972115 341 RTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIILTGTATLLTASYTLSM 415
Cdd:PRK06589 358 LKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIASSILSAL 432
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-389 |
1.79e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 59.75 E-value: 1.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 89 PARKQIFTMALIMVQPLIILAFS-------TTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTlISSLPLL 161
Cdd:PRK12662 99 PNRKEISVNKIPSFYSAFLLCLGgllgilvSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGT-IGATFYL 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 162 VAILYLHTQMGTLHLPTLKLhphILQPTSTQHwsplLLNIALLMAFM---VKAPLYGLHLWLPKAHVEAPIAGSMLLAAL 238
Cdd:PRK12662 178 IGIGFLYAITGTLNMGDMFL---IIQDLPTNR----AIQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGT 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 239 LLKLGGYGIMRIT--------PLTSPPTNSLlhypFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQT 310
Cdd:PRK12662 251 STKVMIYLIIRIVydvfkanfVFTTLPFNNV----FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNT 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 311 HWSYSGAMILMISHGLTSSMLFCLANT---NYERTHSRILLltrGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIM 387
Cdd:PRK12662 327 YYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
..
gi 726972115 388 VA 389
Cdd:PRK12662 404 DA 405
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
75-328 |
6.90e-09 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 57.82 E-value: 6.90e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 75 LMILASQGHLQHEPPARKQIFTMALIMVQPLIILAfSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGI-YLLFYT 153
Cdd:COG1007 85 LVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 154 LISSLPLL-VAILYLHTqmGTLHLPTlklhphILQPTSTQHWSPLLLNIALLM---AFMVKAPLYGLHLWLPKAHVEAPI 229
Cdd:COG1007 164 LSSGFLLYgISLLYGAT--GSLNLAG------IAAALAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPT 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 230 AGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHYPFITLA----LWGALMTssicLRQIDLKSLIAYSSVSHMGLVIAA 305
Cdd:COG1007 236 PVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLG 311
|
250 260
....*....|....*....|...
gi 726972115 306 CMIQTHWSYSGAMILMISHGLTS 328
Cdd:COG1007 312 LAAGTPLGVSAALFYLLAYLFMN 334
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
105-419 |
5.83e-08 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 55.08 E-value: 5.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 105 LIILAFSTTELMLFyISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLkLHPH 184
Cdd:MTH00020 124 MVVLVTSDNYLQLF-IGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSV-FNMV 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 185 ILQPTSTQHWSPLLLNIALlmafMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITPLTSPPTNSLLh 263
Cdd:MTH00020 202 VSAPSSDITLICLFLFIGA----VGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLLIRSSPLFEQAPLALI- 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 264 yPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQthwSYSGAMILMISHGLTSSMLFCLANT-----N 338
Cdd:MTH00020 276 -IVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAFFKALLFLSAGSvihalS 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 339 YERTHSRIllltRGLQPLLPLMATWWLLANLTNMALPPTTNLMA-ELSIMVALFNWSPPTII-LTGTATLLTASYTLSML 416
Cdd:MTH00020 352 DEQDMRKM----GGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSkDLILELAFGQYYLIFAYwLGCFSALLTAFYSIRLI 427
|
...
gi 726972115 417 TTT 419
Cdd:MTH00020 428 YLT 430
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-378 |
1.83e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 53.42 E-value: 1.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 59 DQTSSPLLVLSCWLTPLMILASQGHLQHEPPARKQIFTMALIMVQpLIILAFSTTELMLFyISFEATLIPTLVLITRWGS 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFL-MMVLVTSDNYLQLF-IGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 139 QPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLK---LHPHILQ------PTSTQHWSPL-LLNIALLMAFM 208
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDrgyyggGAYESPLAPFaIIGILLLIGCI 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 209 VKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIM-RITPLTSPPTNSLLhypfiTLALWGAL---MTSSICLRQ 284
Cdd:MTH00032 237 GKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMiRSFPLFEKAPLTLL-----IITIFGALtafFAATVGLVQ 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 285 IDLKSLIAYSSVSHMGLVIaaCMIQTHWSYSGAMILMISHGLTSSMLFCLA-----NTNYERTHSRILlltRGLQPLLPL 359
Cdd:MTH00032 311 NDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPF 385
|
330
....*....|....*....
gi 726972115 360 MATWWLLANLTNMALPPTT 378
Cdd:MTH00032 386 TYTMMLIGSFSIMGLPYLT 404
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
191-391 |
2.13e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 53.35 E-value: 2.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 191 TQHWSPLLLNIALLMAFM---VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHYPFI 267
Cdd:PRK06521 201 AAHLSPFWASLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVL 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 268 TLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAA---CMI--------QTHWSYSGAMILMISHGLTSSMLFCLAN 336
Cdd:PRK06521 281 ALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAG 360
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 726972115 337 TNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALF 391
Cdd:PRK06521 361 AVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
108-407 |
1.16e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 50.74 E-value: 1.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 108 LAFSTTELMLFyISFEATLIPTLVLITRWGSqPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTL-KLHPHil 186
Cdd:PRK06525 129 LVYSSTLLGLL-LFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALsGLHGS-- 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 187 qptstqhwSPLLLNIALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHYPF 266
Cdd:PRK06525 205 --------LKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVG 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 267 ITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWS---YSGAMILMISHGLTSSMLFCLANTNYERTH 343
Cdd:PRK06525 276 AVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSrlaLEGSIAYIFNHAFAKSLFFLVAGALSYSCG 355
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 726972115 344 SRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIILTGTATLL 407
Cdd:PRK06525 356 TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
106-392 |
1.21e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 50.72 E-value: 1.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 106 IILAFSTTELMLFYISFEATLIPTLVLITRWGSQPERLSAGI-YLLFYTLISSLPLL-VAILYLHTqmGTLHLPTLKLHP 183
Cdd:TIGR01770 115 IFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGLLLFgISLIYGFT--GSLNFEDLLLFL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 184 HILQPTStqhwSPLLLNIAL-LMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLL 262
Cdd:TIGR01770 193 SNGMLNI----SLLLLGIVLiLVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAW 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 263 HYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTS----SMLFCLANTN 338
Cdd:TIGR01770 269 QIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLSLLRSYK 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 726972115 339 YERTHSriLLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFN 392
Cdd:TIGR01770 349 DEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLK 400
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
99-376 |
2.67e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 49.83 E-value: 2.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 99 LIMVQPLIILAFSTTELMLFyISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPT 178
Cdd:PRK12649 118 LLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIAT 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 179 LKLHPHILqptSTQHWSPLLLN--IALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITPLTS 255
Cdd:PRK12649 197 ILQDSELI---ENIKGHPLFLItlILIFIGAAAKSAQGPFYIWLPNA-MEAPTPVSAFLHSATMVKAGvYLVARIHPIFS 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 256 PPTNSLLHYPFITLALwgALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTH----WSYSGAMILMISHGLTSSML 331
Cdd:PRK12649 273 GTEAWFILVSGTGMIT--MVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHATFKACL 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 726972115 332 FCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK12649 351 FLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-335 |
5.38e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 48.69 E-value: 5.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 137 GSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLHphILQPTSTQHWsplLLNIA---LLMAFMVKAPL 213
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQR--IAQLPAADRA---LLEAGaalLLVVFLIKAAM 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 214 YGLHLWLPKAHVEA--PIAGSMllaALLLKLGGYGIMRITPLTSPPTNSLLHYPFITLALWGALMTSSI----CLRQIDL 287
Cdd:PRK12666 227 WPLNFWLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRL 303
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 726972115 288 KSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLA 335
Cdd:PRK12666 304 RRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
198-409 |
5.83e-06 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 48.75 E-value: 5.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 198 LLNIALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMRITPL--TSPPTNSLLhypfITLALWGAL 275
Cdd:PRK07390 222 LLGLALIAGPTGKCAQFPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVlaLSPVALTVL----IVIGTVTAI 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 276 MTSSICLRQIDLKSLIAYSSVSHMGLV-IAACMIQThwsySGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQ 354
Cdd:PRK07390 297 GASLVAIAQIDIKRALSYSTSAYLGLVfIAVGLQQP----DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLW 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 726972115 355 PLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNWSPPTIILTGTATLLTA 409
Cdd:PRK07390 373 SRMPATTLAFLVGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTA 427
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
194-432 |
1.71e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 47.33 E-value: 1.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 194 WSPLLLNIALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITPLTSpptnsllHYPFI--TLA 270
Cdd:PRK07376 224 WLALLLCILVFLGPMAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGvFLVARMYPVFE-------QFPAVmtVIA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 271 LWGAL---MTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQthwSYSGAMILMISHGLTSSMLFCLANT---------N 338
Cdd:PRK07376 296 WTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCG---AYSAGLFHLMTHAYFKAMLFLGSGSvihgmeevvG 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 339 YERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFNwSPPTIILTGTATL-LTASYTLSMLT 417
Cdd:PRK07376 373 HDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFE-ANPALWFVGFLTAgMTAFYMFRMYF 451
|
250
....*....|....*
gi 726972115 418 TTQRGTLPPHITTLQ 432
Cdd:PRK07376 452 LTFEGEFRGNDKELQ 466
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-413 |
6.15e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 45.69 E-value: 6.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 115 LMLFYISFEATLIPTLVLItrwGSQPERLS---AGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLKLHPhilqPTST 191
Cdd:PRK12644 128 LLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADP----PTGP 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 192 qhwsplLLNIA---LLMAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRITP--LTSPPtn 259
Cdd:PRK12644 201 ------AVSVAvvlILVGALSKSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKA------GIYLVARLAPgfADVPV-- 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 260 slLHYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNY 339
Cdd:PRK12644 266 --WRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIID 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 340 ERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELSIMVALFN----WSPPTIILTGTA--TLLTASYTL 413
Cdd:PRK12644 344 HSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHdgalGPAGPVVLAGIVlgSILTVAYSL 423
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
282-328 |
1.85e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 43.66 E-value: 1.85e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 726972115 282 LRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTS 328
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
108-332 |
2.00e-04 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 43.87 E-value: 2.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 108 LAFSTTELMLFYISFEATLIpTLVLITRW--GSQPERLSAGIYLLFYtLISSLPLLVAILYLHTQMGTLHLPTLKLHPHI 185
Cdd:PRK08601 118 LAWLSGDLRLMALCWGATLL-GLTLLIGLnkGWKVAREAAKISGMLF-LISWLALALAIVWLFIATGEWQLTSVLSNENL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 186 LQPTStqhWSPLLLNIALLMAFMVKAPLYGLHLWLPKAHVeAPIAGSMLLAALLLKLGGYGIMRITPLTSpptNSLLHYP 265
Cdd:PRK08601 196 AQLGT---WEKTGINLLLILAVMIPAAQWPFQRWLIESAV-APTPVSAIMHAGLVNAGGIMLTRFSPLFH---DDIAQIL 268
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 726972115 266 FITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQthwSYSGAMILMISHGLTSSMLF 332
Cdd:PRK08601 269 LLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALG---AYSAAIIHLILHGLFKATLF 332
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
105-332 |
2.95e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 43.46 E-value: 2.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 105 LIILAFSTTELMLFyISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLklhpH 184
Cdd:MTH00210 124 MIVLVTSDNYVQLF-IGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTI----S 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 185 ILQPTSTQHWSPLLLNIALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITPLTSpptNSLLH 263
Cdd:MTH00210 199 SLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLIIRSGPLFE---GSPLA 274
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 264 YPFIT-LALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQthwSYSGAMILMISHGLTSSMLF 332
Cdd:MTH00210 275 LTIVTiLGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGIS---NYSTSLFHLMNHAFFKALLF 341
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
260-376 |
3.51e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 42.71 E-value: 3.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 260 SLLHYPFITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGLTSSMLFCLANTNY 339
Cdd:PRK06277 263 PSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVS 342
|
90 100 110
....*....|....*....|....*....|....*..
gi 726972115 340 ERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 376
Cdd:PRK06277 343 YRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
140-332 |
1.36e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 41.03 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 140 PERLSAGI-YLLFYTLiSSLPLLVAILYLHTQMGTLhlptlklhphILQPTSTQHWSPLLLniaLLMAFMVKAPLYGLHL 218
Cdd:PRK12668 139 KAAVRAGFrYLLVHVL-GGVLLLAGILLHYAETGSF----------AFGAIAGLGGTAAWL---ILIGFGVNAAFPPLHA 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 219 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITpltspPTNSLLHYPFITLALWGALMTssicLRQIDLKSLIAYSSVSH 298
Cdd:PRK12668 205 WLPDAYPEATVTGSVFLSAFTTKTAVYALARAF-----PGTELLIYIGAAMAVYGVFFA----LLENDLRRLLSYHIVSQ 275
|
170 180 190
....*....|....*....|....*....|....
gi 726972115 299 MGLVIAACMIQTHWSYSGAMILMISHGLTSSMLF 332
Cdd:PRK12668 276 VGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
203-400 |
2.05e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 40.25 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 203 LLMAFMVKAPLYGLHLWLPkahveaPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHYPFITLALWGALMTSSICL 282
Cdd:MTH00144 90 LLLGLCLKLGLFPFHFWVP------SVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVISVLSALVGSIGGL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 283 RQIDLKSLIAYSSVSHMGLVIAACMIQTHWSYSGAMILMISHGltsSMLFCLANTNYerthSRILLLTRGLQPLLPLMAT 362
Cdd:MTH00144 164 NQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSG---FLFFSLWSGDS----GSMKDLGSLKPSYKTGLSI 236
|
170 180 190
....*....|....*....|....*....|....*...
gi 726972115 363 WWLLANLtnMALPPTTNLMAELSIMVALFNWSPPTIIL 400
Cdd:MTH00144 237 ISLLLSL--GGLPPFLGFCSKLLVLISSMESSPLLLIL 272
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
160-361 |
3.16e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 40.07 E-value: 3.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 160 LLVAILYLHTQMGTLHLPTLklHPHILQPTST--QHWSPLLLnialLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAA 237
Cdd:PRK08168 167 LLAAAALAYLEVGSLSLSAL--WAHLAAQGASpsLQAAALLL----VLAVILKTAQLPVHGWLIQV-MEAPTPVSALLHA 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 238 LLLKLGGYGIMRITPL--TSPPTNSLLhypfITLALWGALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQThwsYS 315
Cdd:PRK08168 240 GVVNLGGFVLIRFAPLleQAPPARWLL----VLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGL---YE 312
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 726972115 316 GAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMA 361
Cdd:PRK08168 313 LALLHLVAHSLYKAHAFLSASEAVRDTRLRRLQGPQSAAGVVSLLL 358
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
201-369 |
3.64e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.77 E-value: 3.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 201 IALLMAFMVKAPLYGLHL--WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRITPLTSPPTNSLLHYPFITLALWGALMTS 278
Cdd:PRK06459 162 ILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGA 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 279 SICLRQIDLKSLIAYSSVSHMGLVIAAC--------MIQT--HWSYSGAMILMISHGLTSSMLFCLANTNYERTHSRI-- 346
Cdd:PRK06459 242 LYAYVSENVKGLLAFSTIENNGAILVALglymvtkqLITSieHFSLITVILYSFAHSVAKTGLFLSSGLQEKQSITYSkk 321
|
170 180 190
....*....|....*....|....*....|....*.
gi 726972115 347 ----------LLLTRGLQPLLPL---MATWWLLANL 369
Cdd:PRK06459 322 irnrwielglTLLASSLSGLLPNiggVASWLLLESL 357
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
111-417 |
4.04e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 39.57 E-value: 4.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 111 STTELMLFYISFEATLIPTLVLITRWGSQPERLSAGIYLLFYTLISSLPLLVAILYLHTQMGTLHLPTLklhphILQPTS 190
Cdd:MTH00208 156 SSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEI-----LSLNNS 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 191 TQHWSPLLLnIALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRITPLTSPPTNsllhYPFITL 269
Cdd:MTH00208 231 NSFLINILL-FGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGvFLLIRTSPLISNSPW----FLSLCL 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 270 ALWG--ALMTSSICLRQIDLKSLIAYSSVSHMGLVIAACMIQTHWSysgAMILMISHGLTSSMLF-CLANTNYERTHSRI 346
Cdd:MTH00208 305 ILGSltALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNL---ALFHICTHAFFKAMLFlCSGSIIHSLNNEQD 381
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 726972115 347 LLLTRGLQPLLPLMATWWLLANLTNMALP-----PTTNLMAELSImVALFNWSppTIILTGTATLLTASYTLSMLT 417
Cdd:MTH00208 382 LRKMGGLSFLLPVTSSCIILGSLALMGTPflagfYSKDLILEAGL-ASISNLL--SIILALIATLLTAVYSFRIIF 454
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-392 |
9.00e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 38.65 E-value: 9.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 155 ISSLPLLVAILYLHTQMGTLHLPTLKLHPHiLQPTSTQHWSPLLLNIALLmafmvkAPLYGLHLWLPKAHVEAPIAGSML 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQ-QLPLGSDIWLLGVIGFGLL------AGIIPLHGWVPQAHANASAPAAAL 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 235 LAALLLKLGGYGIMRITPLTSPPTnslLHYPFITLALwgALMTSSI----CLRQIDLKSLIAYSSVSHMGLV-------- 302
Cdd:PRK08042 218 FSTVVMKIGLLGILTLSLLGGNAP---LWWGVALLVL--GMITAFVgglyALMEHNIQRLLAYHTLENIGIIllglgagv 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 726972115 303 ----------IAACMIqthwsysGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNM 372
Cdd:PRK08042 293 tgialeqpalIALGLV-------GGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMA 365
|
250 260
....*....|....*....|
gi 726972115 373 ALPPTTNLMAELSIMVALFN 392
Cdd:PRK08042 366 ALPPLNGFAGEWVIYQSFFK 385
|
|
| |
