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Conserved domains on  [gi|712045143|gb|AIW64802|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Mekongiella wardi]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 16-310 2.12e-142

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 403.77  E-value: 2.12e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00193  12 IICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIY 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQ 175
Cdd:MTH00193  92 PYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQ 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 176 LYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGGDLYS 255
Cdd:MTH00193 172 KYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLS 251

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 712045143 256 LIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSILL 310
Cdd:MTH00193 252 LLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 16-310 2.12e-142

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 403.77  E-value: 2.12e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00193  12 IICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIY 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQ 175
Cdd:MTH00193  92 PYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQ 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 176 LYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGGDLYS 255
Cdd:MTH00193 172 KYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLS 251

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 712045143 256 LIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSILL 310
Cdd:MTH00193 252 LLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
16-302 3.33e-96

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 286.29  E-value: 3.33e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143   16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:pfam00146   6 LVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143   96 PYLTYM--CSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMS 173
Cdd:pfam00146  86 PFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVE 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  174 YQLYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGG-- 251
Cdd:pfam00146 166 AQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwl 245

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 712045143  252 ----DLYSLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIF 302
Cdd:pfam00146 246 gpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-314 5.62e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 266.23  E-value: 5.62e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:COG1005   19 LVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVI 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMC--SFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMS 173
Cdd:COG1005   99 PFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVE 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 174 YQ-LYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGG- 251
Cdd:COG1005  179 AQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGw 258

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 712045143 252 -----------DLYSLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLnfliffcgLSILLTLII 314
Cdd:COG1005  259 lgpfpilplggLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL--------VNLVLTAAV 324
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 16-310 2.12e-142

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 403.77  E-value: 2.12e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00193  12 IICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIY 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQ 175
Cdd:MTH00193  92 PYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQ 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 176 LYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGGDLYS 255
Cdd:MTH00193 172 KYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLS 251

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 712045143 256 LIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSILL 310
Cdd:MTH00193 252 LLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 16-308 9.89e-120

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 346.25  E-value: 9.89e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00225  11 LICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLY 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQ 175
Cdd:MTH00225  91 PSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQ 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 176 LYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGG--DL 253
Cdd:MTH00225 171 KYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGffVT 250

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 712045143 254 YSLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSI 308
Cdd:MTH00225 251 IDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 17-307 2.13e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 322.59  E-value: 2.13e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  17 IFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVFP 96
Cdd:MTH00143  12 LCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYP 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  97 YLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQL 176
Cdd:MTH00143  92 SYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQF 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 177 YCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGGD---- 252
Cdd:MTH00143 172 SVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSsvlf 251

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 712045143 253 -LYSLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLS 307
Cdd:MTH00143 252 lLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 16-311 1.39e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 300.29  E-value: 1.39e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00218  12 ILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPL 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQ 175
Cdd:MTH00218  92 PLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQ 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 176 LYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGGDLYS 255
Cdd:MTH00218 172 ETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTT 251

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 712045143 256 LIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSILLT 311
Cdd:MTH00218 252 INLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFA 307
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 19-310 3.29e-98

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 291.65  E-value: 3.29e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  19 VLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVFPYL 98
Cdd:MTH00195  15 VLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSP 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  99 TYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQLYC 178
Cdd:MTH00195  95 FGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFS 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 179 WFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGGDlYSLIF 258
Cdd:MTH00195 175 WVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG-GTIIV 253

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 712045143 259 FMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSILL 310
Cdd:MTH00195 254 ALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 16-313 2.20e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 289.99  E-value: 2.20e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00104  10 IIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPL 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQ 175
Cdd:MTH00104  90 PMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQ 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 176 LYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGG---- 251
Cdd:MTH00104 170 EHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAfhnp 249

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 712045143 252 ---DLYSLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSILLTLI 313
Cdd:MTH00104 250 ympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 16-313 9.67e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 288.44  E-value: 9.67e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00071  15 IIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPL 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQ 175
Cdd:MTH00071  95 PMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQ 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 176 LYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGG---- 251
Cdd:MTH00071 175 EFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGStynh 254

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 712045143 252 ---DLYSLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSILLTLI 313
Cdd:MTH00071 255 lqpELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 16-308 1.51e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 287.95  E-value: 1.51e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00111  15 IIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPL 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQ 175
Cdd:MTH00111  95 PMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQ 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 176 LYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFG----- 250
Cdd:MTH00111 175 EPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNpstln 254

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 251 --GDLYSLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSI 308
Cdd:MTH00111 255 lpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPI 314
NADHdh pfam00146
NADH dehydrogenase;
16-302 3.33e-96

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 286.29  E-value: 3.33e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143   16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:pfam00146   6 LVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143   96 PYLTYM--CSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMS 173
Cdd:pfam00146  86 PFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVE 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  174 YQLYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGG-- 251
Cdd:pfam00146 166 AQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwl 245

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 712045143  252 ----DLYSLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIF 302
Cdd:pfam00146 246 gpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 16-310 3.79e-94

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 281.86  E-value: 3.79e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00040  14 IVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLI 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQ 175
Cdd:MTH00040  94 PVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQ 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 176 LYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGGDLY- 254
Cdd:MTH00040 174 NGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGGSPf 253

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 712045143 255 -------SLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSILL 310
Cdd:MTH00040 254 neifpinIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 16-311 5.83e-92

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 276.49  E-value: 5.83e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00134  16 IVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPM 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQ 175
Cdd:MTH00134  96 PMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQ 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 176 LYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGG---- 251
Cdd:MTH00134 176 ESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGAship 255

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 712045143 252 ---DLYSLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSILLT 311
Cdd:MTH00134 256 tlpELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFA 318
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-314 5.62e-88

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 266.23  E-value: 5.62e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:COG1005   19 LVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVI 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMC--SFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMS 173
Cdd:COG1005   99 PFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVE 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 174 YQ-LYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGG- 251
Cdd:COG1005  179 AQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGw 258

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 712045143 252 -----------DLYSLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLnfliffcgLSILLTLII 314
Cdd:COG1005  259 lgpfpilplggLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL--------VNLVLTAAV 324
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 16-311 3.45e-86

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 261.25  E-value: 3.45e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00010  13 YVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLY 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYQ 175
Cdd:MTH00010  93 PHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQ 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 176 lYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGGDLYS 255
Cdd:MTH00010 173 -YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSFIPSI 251

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 256 LI----FFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSILLT 311
Cdd:MTH00010 252 FIsdlmLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 16-308 1.13e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 260.43  E-value: 1.13e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00054  12 LVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVI 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLT--YMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMS 173
Cdd:MTH00054  92 PYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVL 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 174 YQLYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGGDL 253
Cdd:MTH00054 172 AQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWL 251

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 712045143 254 YSLI----------FFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSI 308
Cdd:MTH00054 252 VISGptsyfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
16-297 6.86e-83

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 253.19  E-value: 6.86e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:PRK06076  20 LVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVI 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYL-TYMCSFM-YGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMS 173
Cdd:PRK06076 100 PFGpELVIADLnVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVE 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 174 YQLYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGG-- 251
Cdd:PRK06076 180 AQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGwl 259

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 712045143 252 --------DLYSLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSL 297
Cdd:PRK06076 260 ppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-306 4.53e-81

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 248.50  E-value: 4.53e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143   1 MSYDLLMFLLNFLLLVIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFS 80
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  81 PIFSLMISLVVWSVFPYL--TYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 159 LIFLVGSFNLVDFMSYQL-YCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSI 237
Cdd:MTH00216 161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 712045143 238 IFMSALMSLFFFGGDLY--------SLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGL 306
Cdd:MTH00216 241 ILMSCLTTILFLGGWLSpikyfkggAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 16-308 4.22e-68

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 216.04  E-value: 4.22e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFV--LISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWS 93
Cdd:MTH00029  15 IIFVplLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWA 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  94 V--FPYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDF 171
Cdd:MTH00029  95 IvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEI 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 172 MSYQLYCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGG 251
Cdd:MTH00029 175 VISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGG 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 252 DL-----------------------YSLIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSI 308
Cdd:MTH00029 255 WLspldgiptppeafsifeqiasskSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-308 3.41e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 201.28  E-value: 3.41e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:MTH00090   6 MIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSYq 175
Cdd:MTH00090  86 PYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSFSL- 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 176 lycWFVVICFPLMIscfaSCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGgdlys 255
Cdd:MTH00090 165 ---SLFVIYLPFLI----MIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK----- 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 712045143 256 lIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFFCGLSI 308
Cdd:MTH00090 233 -FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 17-303 3.60e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 162.79  E-value: 3.60e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  17 IFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIfsLMISLVVWSVFP 96
Cdd:MTH00058  12 LIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVF--LLVLLVVFYCFI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  97 Y-LTYMCSFM-YGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMSY 174
Cdd:MTH00058  90 YgSYYSGSYSsLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYS 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 175 qlyCWFVVICFPLMISCFASC-LAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFGGDL 253
Cdd:MTH00058 170 ---GWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGF 246

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 712045143 254 YSLIFFMKLTFisfcFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFF 303
Cdd:MTH00058 247 VSIMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
ndhA CHL00032
NADH dehydrogenase subunit 1
 16-297 6.97e-25

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 102.72  E-value: 6.97e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPNKVGFIGVLQPFSDALKLLTKEQFVLITSNYLLYYFSPIFSLMISLVVWSVF 95
Cdd:CHL00032  37 VLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVI 116

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 P--YLTYMCSFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMS 173
Cdd:CHL00032 117 PfgYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVE 196

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 174 YQ-------LYCWFVVICFplmISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSL 246
Cdd:CHL00032 197 AQskygfwgWNLWRQPIGF---IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTV 273

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 712045143 247 FFFGGDLYSL--IFFMKL-----------TFIS----------FCFIWV--RGTLPRFRYDKLMYMAWSSFLPLSL 297
Cdd:CHL00032 274 LYLGGWNLSIpyIFIPELfeinktggvfgTTIGifitlaktylFLFISIttRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
16-303 1.48e-24

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 100.64  E-value: 1.48e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  16 VIFVLISVAFLTLFERSVLGYIHIRKGPnkvgfiGVLQPFSDALKLLTKEQFVLITSNyLLYYFSPIFSLMISLVVWSVF 95
Cdd:COG0650   11 LLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALAAMLLAALLV 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143  96 PYLTYMC--SFMYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIFLVGSFNLVDFMS 173
Cdd:COG0650   84 PVLTTGPplSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVA 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712045143 174 YQL---YCWFVVICFPLMISCFASCLAETNRTPFDFAEGESELVSGFNVEYGAGGFTLIFLSEYTSIIFMSALMSLFFFG 250
Cdd:COG0650  164 YQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLP 243

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 712045143 251 GDLYS------LIFFMKLTFISFCFIWVRGTLPRFRYDKLMYMAWSSFLPLSLNFLIFF 303
Cdd:COG0650  244 WGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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