|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-349 |
3.69e-151 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 428.88 E-value: 3.69e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 1 MKPPILMIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 81 SGQWTITNIdsNNMLISSTMIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSINLNILMLIA 160
Cdd:MTH00105 81 SGQWTITKL--TNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 161 LLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYLMLTITMFTMLNMNTNTTTLTLSSLWSKSP 240
Cdd:MTH00105 159 ILSILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 241 TITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKWQFQ 320
Cdd:MTH00105 239 LMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFE 318
|
330 340
....*....|....*....|....*....
gi 712041735 321 LKKRSLLLSPLIILSTLSLPLSPVFSTLN 349
Cdd:MTH00105 319 NTKPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-348 |
1.11e-111 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 328.69 E-value: 1.11e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 1 MKPPILMIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 81 SGQWTITNIdsNNMLISSTMIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSiNLNILMLIA 160
Cdd:MTH00135 81 TGQWDIQQM--SHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 161 LLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYLMLTITMFTMLNMNTNTTTLTLSSLWSKSP 240
Cdd:MTH00135 158 LTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 241 TITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKWQFQ 320
Cdd:MTH00135 238 ALTALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLP 317
|
330 340
....*....|....*....|....*...
gi 712041735 321 LKKRSLLLSPLIILSTLSLPLSPVFSTL 348
Cdd:MTH00135 318 STQLTLPLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
8.94e-106 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 313.78 E-value: 8.94e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 1 MKPPILMIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 81 SGQWTITNIDSNNMLISSTMivALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSINLNILMLIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTI--ALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 161 LLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYLMLTITMFTMLNMNTNTTTLTLSSLWSKSP 240
Cdd:MTH00070 159 LLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 241 TITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKWQFQ 320
Cdd:MTH00070 239 TLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFK 318
|
330 340
....*....|....*....|...
gi 712041735 321 LKKrSLLLSPLIILSTLSLPLSP 343
Cdd:MTH00070 319 NKT-NNLLSLTIILSLMLLPITP 340
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-348 |
3.66e-104 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 309.45 E-value: 3.66e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 1 MKPPILMIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 81 SGQWTITNIdsNNMLISSTMIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSINLNILMLIA 160
Cdd:MTH00112 81 TGQWDITQL--TNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 161 LLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYLMLTITMFTMLNMNTNTTTLTLSSLWSKSP 240
Cdd:MTH00112 159 ILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 241 TITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKWQFQ 320
Cdd:MTH00112 239 TLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTK 318
|
330 340
....*....|....*....|....*...
gi 712041735 321 LKKRSLLLSPLIILSTLsLPLSPVFSTL 348
Cdd:MTH00112 319 PKKNTLTATLTTLSTLL-LPLSPMILTI 345
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-348 |
5.31e-75 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 235.25 E-value: 5.31e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 1 MKPPILMIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 81 SGQWTITniDSNNMLISSTMIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSINLNILMLIA 160
Cdd:MTH00200 81 SGQWGIS--EMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 161 LLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYLMLTITMFTMLNMNTNTTTLTLSSLWSKSP 240
Cdd:MTH00200 159 LLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 241 TITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKWQFQ 320
Cdd:MTH00200 239 ILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTK 318
|
330 340
....*....|....*....|....*...
gi 712041735 321 LKKrSLLLSPLIILSTLSLPLSPVFSTL 348
Cdd:MTH00200 319 SNS-NLLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-309 |
4.84e-74 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 232.51 E-value: 4.84e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 1 MKPPILMIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 81 SGQWTItnIDSNNMLISSTMIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSINLNILMLIA 160
Cdd:MTH00041 81 SGSWSI--NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 161 LLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYLMLTITMFTMLNMNTNTTTLTLSSLWSKSP 240
Cdd:MTH00041 159 ILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNP 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 712041735 241 TITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYSTSLTLFPT 309
Cdd:MTH00041 239 ISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQ 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.13e-46 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 161.14 E-value: 1.13e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 1 MKPPILMIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 81 sgqwtitNIDSNNMLISSTMIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFpsiNLNILMLIA 160
Cdd:MTH00160 81 -------NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLI---NNNFIIIII 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 161 LLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYLMLTITMFTMLNMNTNTTTLTLSSLWSKSP 240
Cdd:MTH00160 151 ILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSK 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 241 TITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYSTSLTLFptpNNIKMKWQFQ 320
Cdd:MTH00160 231 KIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNY---NKNKWNLKKK 307
|
330 340
....*....|....*....|....*
gi 712041735 321 LKKRSLLLSPLIILSTLSLPLSPVF 345
Cdd:MTH00160 308 KNKFSLILNFLSFISLFGLILSSLL 332
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-317 |
2.89e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 154.66 E-value: 2.89e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 1 MKPPILMIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00144 1 MSSPSNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 81 SGQWtitnidsnnmLISSTMIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSINL-NILMLI 159
Cdd:MTH00144 81 SFSW----------FSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVI 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 160 ALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYLMLTITMFTMLNMNTNTTTLTLSSLwSKS 239
Cdd:MTH00144 151 SVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPS 229
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 712041735 240 PTITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKW 317
Cdd:MTH00144 230 YKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-301 |
9.23e-44 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 153.78 E-value: 9.23e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 1 MKPPILMIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:MTH00011 3 STFPTMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 81 SGQWTITNidsnnmliSSTMIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSINLNILMLIA 160
Cdd:MTH00011 83 PSLLKNIT--------ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 161 LLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYLMLTITMFTMLNMNTNTTTLTLSSLWSKSP 240
Cdd:MTH00011 155 AMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQ 234
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 712041735 241 TITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYS 301
Cdd:MTH00011 235 TTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN 295
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
7-302 |
3.06e-34 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 128.25 E-value: 3.06e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 7 MIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFtivfnamhsGQWTI 86
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLM---------GGSLS 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 87 TNIDSNNMLISSTMIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPIsiMIQMFPSINLNILMLIALLSVLT 166
Cdd:MTH00197 72 FSNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPL--LILAFNSSSFMGLLICSVLSSLI 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 167 GGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYLMLTITMFTMLNMNTNTTTLTLSSLWSKSPTITTMI 246
Cdd:MTH00197 150 GGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFL 229
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 712041735 247 LVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYST 302
Cdd:MTH00197 230 GLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKS 285
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
4-324 |
5.26e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 105.10 E-value: 5.26e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 4 PILMIIMTtifMGTMLTMISSHWLLIWIGLEINMLSIIPILA-KNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHSG 82
Cdd:MTH00199 100 PILILIVA---LGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 83 QwtiTNIDSNNMLISST-----MIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSINlnILM 157
Cdd:MTH00199 177 E---TSIQGINSILTGDvgkilITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVL 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 158 LIALLSVLTGGWGGLNQTQLRKILAYSSIAHMG---WMMTILMFCP-SMTMLNLFIYLMLTITMFTMLNMNTNTTTLT-- 231
Cdd:MTH00199 252 ICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESiQASLIYMIIYVIMSICSFSIILSLKLTKGLIve 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 232 LSSLWSKSPTITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIystSLTLFPTPN 311
Cdd:MTH00199 332 VSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVV---QIIYFQADY 408
|
330
....*....|...
gi 712041735 312 NIkMKWQFQLKKR 324
Cdd:MTH00199 409 SI-LIWQKVLKKE 420
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-299 |
1.90e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 96.64 E-value: 1.90e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 13 IFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKP-RSTEAATKYFLTQATASMLLMFTIVFNAMHSGQWTITNID- 90
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 91 --SNNMLISSTM--------IVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPsiNLNILMLIA 160
Cdd:MTH00196 82 vlNSGQSFSSVSvpigylliIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGL--NVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 161 LLSVLTGGWGGLNQTQLRKILAYSSIAHMG---WMMTILMF-CPSMTMLNLFIYLMLTITMFTMLNMNTNTTTLTL--SS 234
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGfvlWGIEIGSFeSIQASLVYLFIYIIMSICVFSIILALNVYKNLIIefSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 712041735 235 LWSKSPTITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLI 299
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIV 304
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-299 |
2.45e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 94.63 E-value: 2.45e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 8 IIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILA-KNPKPRSTEAATKYFLTQATASMLLMF----------TIVF 76
Cdd:TIGR01770 106 ILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFgisliygftgSLNF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 77 NAMHSGQWTITNIDSNNMLISSTMIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSI----- 151
Cdd:TIGR01770 186 EDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgfs 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 152 --NLNILMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYLMLTITMFTMLNMNTNTTT 229
Cdd:TIGR01770 266 eaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSLLR 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 230 LT----------LSSLWSKSPTITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLI 299
Cdd:TIGR01770 346 SYkdewieyisdFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-213 |
4.76e-21 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 91.61 E-value: 4.76e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 23 SSHWLLIWIGLEINMLSIIPILAKNPK-PRSTEAATKYFLTQATASMLLMFTIVFNAMHSGQWTITNID---------SN 92
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKsPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSkaltgglnsSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 93 NMLISSTMIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLL-TWQKLAPISIMIQMFPSIN-----LNILMLIALLSVLT 166
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLIRRSLLYLPsspfiQQILLILAIISMLL 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 712041735 167 GGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYLML 213
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLT 207
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
4-300 |
5.19e-21 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 93.64 E-value: 5.19e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 4 PILMIIMTTifmGTMLTMISSHWLLIWIGLEINMLSIIpILA--KNPKPRSTEAATKYFLTQATASMLLMF--------- 72
Cdd:COG1007 105 YALLLFATL---GMMLMASANDLLTLFLGLELLSLSLY-VLVafRRDDRRSSEAALKYFLLGALSSGFLLYgisllygat 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 73 -TIVFNAMhsGQWTITNIDSNNMLISST--MIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPIS----IMI 145
Cdd:COG1007 181 gSLNLAGI--AAALAAGGANSPLLLLGLvlVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAallrLLV 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 146 QMFPSINLNILMLIALLSVLT---GGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSM----TMLNLFIYLMLTITMF 218
Cdd:COG1007 259 EAFPGLAADWQLLLAVLAVLSmtvGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAF 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 219 TMLNMNTNTTTLTLS-----SLWSKSPTITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLY 293
Cdd:COG1007 339 AVILLLSRKGGEAEEiedlaGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAY 418
|
....*..
gi 712041735 294 FYMRLIY 300
Cdd:COG1007 419 YYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
4-299 |
1.12e-16 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 80.64 E-value: 1.12e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 4 PILMIIMTtifmGTMLTMISS-HWLLIWIGLEINMLS--IIPILAKNpKPRSTEAATKYFLTQATASMLLMFTIVFNAMH 80
Cdd:PRK05777 106 YLLVLFAL----LGMMVMVSAnDLLTLFLGLELLSLPlyALAALRRD-RRRSLEAAIKYFVLGALASGFLLYGMSLLYGA 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 81 SGQWTITNI--------DSNNMLISST--MIVALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMF-- 148
Cdd:PRK05777 181 TGSLSFAGIakaladgsGNSLLLLFGLvfLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLvv 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 149 -----PSINLNILMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSM----TMLNLFIYLMLTITMFT 219
Cdd:PRK05777 261 afgglSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTLGAFG 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 220 MLNMNTNTTTLT-----LSSLWSKSPTITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYF 294
Cdd:PRK05777 341 VISLLRRKGGEAesisdFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFY 420
|
....*
gi 712041735 295 YMRLI 299
Cdd:PRK05777 421 YLRVI 425
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
15-303 |
1.71e-12 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 67.86 E-value: 1.71e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 15 MGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHSGQWTITNIDSNNM 94
Cdd:COG0651 118 AGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLA 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 95 LISST--------MIVALTMKLGMTPFHFWVPEV----TQGVS-LMTGMLLltwqKLAPISIM---IQMFPSINLN---- 154
Cdd:COG0651 198 ELDPGlllaafalLLVGFGIKAALFPLHFWLPDAypaaPSPVSaLLSGLLT----KVGVYAILrvlTLLFGADPALflgt 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 155 ILMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYL----MLTITMF----TMLNMNTN 226
Cdd:COG0651 274 LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFlaagAIERATGT 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 712041735 227 TTTLTLSSLWSKSPTITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYSTS 303
Cdd:COG0651 354 RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-193 |
7.58e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 66.42 E-value: 7.58e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 15 MGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRST---------EAATKYFLTQATASMLLMFTIVF--------- 76
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALyfgftgneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 77 --NAMHSGQWTITNIDSNNMLISSTMI-VALTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFpsINL 153
Cdd:MTH00198 279 mlGTILSATLETTNIELRQGSLGYLFItVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLV--ITS 356
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 712041735 154 NILMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMM 193
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFIL 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
55-193 |
1.52e-09 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 58.94 E-value: 1.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 55 AATKYFLTQATASMLLMFTIVFNAMHSGQWTITNIDSNNMLISSTM--------IVALTMKLGMTPFHFWVPEV-----T 121
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAqlllflafFIAFAVKVPMFPFHTWLPDAhveapT 241
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 712041735 122 QGVSLMTGMLLltwqKLAP---ISIMIQMFP---SINLNILMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMM 193
Cdd:COG1008 242 AGSVLLAGVLL----KMGGyglLRFALPLFPeasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVL 315
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
2-193 |
4.19e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 57.73 E-value: 4.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 2 KPPILMIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHS 81
Cdd:PRK12561 85 KPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSG 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 82 GQWT--ITNIDSNN------MLISSTMIVALTMKLGMTPFHFWVP----EVTQGVSLMTGMLLLTWQKLAPISIMIQMFP 149
Cdd:PRK12561 165 DTFTfdLAELGAKSyplaleLLLYAGFLIAFGVKLPIFPLHTWLPdahgEASAPVSMILAGVLLKMGGYALIRFNVQMLP 244
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 712041735 150 SINLNILMLIALLSVLTGGWGGLN---QTQLRKILAYSSIAHMGWMM 193
Cdd:PRK12561 245 DAHVYFAPALAILGVVNIIYGALNafaQDNVKRRLAYSSVSHMGFVL 291
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
7-265 |
2.16e-08 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 55.44 E-value: 2.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 7 MIIMTTIFMGTMLTMISSHWLLIWIGLEinMLSIIPILAK---NPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHSGQ 83
Cdd:PRK02504 113 AAILLTATLGGMFLSGATELVMIFISLE--TLSIASYLLTgymKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 84 WTITNIDSNNMLISSTMIVALTM---------KLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLA----PISIMIQMFPS 150
Cdd:PRK02504 191 STQLSAIALALITSPSLGLALALvfviagiafKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 151 INLN---ILMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMtILMFCP-----SMTMLNLFIYLMLTITMFTMLN 222
Cdd:PRK02504 271 FDEQwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM-IGLVAGteagyASMVFYLLAYLFMNLGAFACVI 349
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 712041735 223 MNTNTT----TLTLSSLWSKSPTITTMILVSLLSLGGLPPLTGFLPK 265
Cdd:PRK02504 350 LFSLRTgtdqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-193 |
8.43e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 53.73 E-value: 8.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 33 LEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHSGqwTITNIDSNNMLISST--------MIVAL 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTG--TLNMADLAGALAENPtvvtafgfVLLAL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 105 TMKLGMTPFHFWVP----EVTQGVSLMTGMLLLTWQKLAPISIMIQMFP------SINLNILMLIALLSVLTGGWGGLNQ 174
Cdd:PRK08375 213 ALKAAVFPLHTWLPraypAAPPVVTALLSGLVTKVAVYALIRIYFTVFGgdfrfaLGLGWLLAVLALLSMLVGSLAALGQ 292
|
170
....*....|....*....
gi 712041735 175 TQLRKILAYSSIAHMGWMM 193
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYIL 311
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
6-193 |
9.68e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 53.40 E-value: 9.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 6 LMIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNA-MHSGQW 84
Cdd:TIGR01972 108 FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTF 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 85 TITNIDSNNMLISSTMI------VALTMKLGMTPFHFWVPEV-----TQGVSLMTGMLLltwqKLAPISIM---IQMFPS 150
Cdd:TIGR01972 188 DLLELLNLPLPFGVQTWlflaffIAFAVKVPLFPLHTWLPDAhveapTAGSVILAGVLL----KMGTYGFLrfnLPLFPD 263
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 712041735 151 ---INLNILMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMM 193
Cdd:TIGR01972 264 aslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
55-193 |
1.11e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 50.20 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 55 AATKYFL-TQAT-----ASMLLMFTIVFNAMHS---GQWTITNIDSN-NMLISSTMIVALTMKLGMTPFHFWVPEV---- 120
Cdd:PRK05846 162 AATKFFLyTLLGsllmlVAIIYLVVVYYNATGTfdiADLLNLPLPPGvQYWLFLAFFIAFAVKMPMFPLHTWLPDAhvqa 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 121 -TQGVSLMTGMLLltwqKLAP---ISIMIQMFPSINLN---ILMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMM 193
Cdd:PRK05846 242 pTAGSVLLAGILL----KMGAyglLRFSLPLFPDASHEfapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVT 317
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-193 |
3.15e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 48.55 E-value: 3.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 33 LEINMLSIIPILA-KNPKPRSTEAATKYFLTQATASMLLMFTIvfnAMHSGQWTITNIDSNNMLISSTM----------- 100
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYLAVKMSENPtvvakialalf 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 101 IVALTMKLGMTPFHFWVPEV-TQGVSLMTGMLLLTWQ----KLAPISIMIqMFPSINLN----ILMLIALLSVLTGGWGG 171
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAyPAAPSSISAMLLVIKQaglyALARVLFSI-YGPAINLAtvgwVIIILGCLTMFVGVAMA 305
|
170 180
....*....|....*....|..
gi 712041735 172 LNQTQLRKILAYSSIAHMGWMM 193
Cdd:PRK08376 306 VVQKDVKRLLAYHSVSQIGYML 327
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
293-343 |
3.69e-06 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 43.40 E-value: 3.69e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 712041735 293 YFYMRLIYSTSLTLFPTPNNIKMKWQFQLKKRSLLLSPLIILSTLSLPLSP 343
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
12-193 |
1.97e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 46.30 E-value: 1.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 12 TIFMGTMLTM-ISSHWLLIWIGLEI-NMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHSGQWTITNI 89
Cdd:COG1009 118 LLFMAAMLGLvLSDNLLLLFVFWELvGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSEL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 90 DSN-NMLISSTMIVALTM--------KLGMTPFHFWVPE-----------------VTQGVSLMTgmllltwqKLAPISI 143
Cdd:COG1009 198 LAAaPTILSSPLLTLILLllllgafgKSAQFPLHFWLPDamegptpvsallhaatmVKAGVYLLA--------RLSPLFA 269
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 712041735 144 MIQMFpsinLNILMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMM 193
Cdd:COG1009 270 LSPVW----LTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMF 315
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
91-193 |
3.12e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 45.46 E-value: 3.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 91 SNNMLISSTMIVALTMKLGMTPFHFWVP----EVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSINLNI---LMLIALLS 163
Cdd:PRK06473 202 STQLLLLAPILVGFGIKIPLVPFHTWLPdahvEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLapwLATWAVVS 281
|
90 100 110
....*....|....*....|....*....|
gi 712041735 164 VLTGGWGGLNQTQLRKILAYSSIAHMGWMM 193
Cdd:PRK06473 282 VLYGASCAIAQKDMKKMVAYSSIGHMGYIL 311
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
85-193 |
3.20e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 42.39 E-value: 3.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 85 TITNIDSNNMLISSTMI-VALTMKLGMTPFHFWVP----EVTQGVSLMTGMLLLTWQKLAPISIMIQMFP---SINLNIL 156
Cdd:PRK07363 195 STQNLSLNTQLILLTGLlLGFGIKIPLVPLHTWLPdaytEASPAVAILLGGVLAKLGTYGLLRFGLQLFPqtwSLVAPGL 274
|
90 100 110
....*....|....*....|....*....|....*..
gi 712041735 157 MLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMM 193
Cdd:PRK07363 275 AIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYIL 311
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-192 |
4.20e-04 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 41.84 E-value: 4.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 10 MTTIFMGTML-TMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFL------TQATASMLLMFTIVFNAMHSG 82
Cdd:PRK06458 113 MYQLFLFTMLlALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANAATVMGDG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 83 QWTI--TNIDS-----NNMLISSTMIVALT---MKLGMTPFHFWVP----EVTQGVSLMTGMLLLTWQKLAPISIMIQMF 148
Cdd:PRK06458 193 EMAIlwTELLKhasllDPTLMKLAFVFLLIgfgTKVGLFPMHAWLPdahsEAPSPVSALLSGVLLNVALYAVLRYYILID 272
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 712041735 149 PSINL----NILMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWM 192
Cdd:PRK06458 273 AAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLI 320
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
102-213 |
4.22e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 41.96 E-value: 4.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 102 VALTMKLGMTPFHFWVPEV-----TQGVSLMTGMLLltwqKLAP---ISIMIQMFPSINLNILMLIALLSVLTGGWGGLN 173
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAhveapVAGSVILAGVLL----KLGGygfIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLT 289
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 712041735 174 ---QTQLRKILAYSSIAHMGwMMTILMFCPSMTMLNLFIYLML 213
Cdd:MTH00217 290 tcrQVDLKRIIAYSSVAHMG-LVTLGIFSHTIQGLVAAIFLML 331
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
104-319 |
8.34e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 40.62 E-value: 8.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 104 LTMKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSINLNILMLIALLSVLTggwgGLNQTQLRKILAY 183
Cdd:MTH00091 67 LMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFFQ----MFLLKSYKNLLIL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 184 SSIAHMGWMMTILMFCPSMTMLNLFIYLMLTITMFTMlnmntntttltlsslWSKSPTITTMILVSLLSLGGLPPLTGFL 263
Cdd:MTH00091 143 SSTESFNWLILSFFFSFFNVFFLFFYYFLLMLFLIPK---------------FNNVNKLNFVSWETLLVFMNLPFSVTFF 207
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 712041735 264 PKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYSTSLTLFPTPNNIKMKWQF 319
Cdd:MTH00091 208 VKIFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFKYNKGFFFF 263
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
17-194 |
8.87e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 40.89 E-value: 8.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 17 TMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATA------SMLLMFTIVFNAMHSGQWTITNID 90
Cdd:PRK08676 115 ITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 91 SNNMLISSTMIVA--------LTMKLGMTPFHFWVPEV-TQGVSLMTGMLLLTWQKLAPISImIQMFP--------SINL 153
Cdd:PRK08676 195 AHASLLSPSVLGAsflfifigFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGI-LRLSAllrqsgaaEQFS 273
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 712041735 154 NILMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMT 194
Cdd:PRK08676 274 NVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-301 |
9.55e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 41.11 E-value: 9.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 49 KPRSTEAATKYFLTQATASMLLMFTIVF--------------NAMHSGQWTITNIDSNNMLISSTMIVAL-----TMKLG 109
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFlyatfgtlnmadlsAKIRGLSFPLTGGLAGNPPLALGVALALalwafTIKAA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 110 MTPFHFWVPEV----TQGVSLMTGMLLLTWQKLAPISIMIQMFP---------SINLNILMLIALLSVLTGGWGGLNQTQ 176
Cdd:PRK12667 239 IFPNHFWLPDAhpaaPSPVSAMLSGLVVNVGAYAIIRFLYTIFGispslidfrAALSPILIILGAVSAIIGALMMVVQKD 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 177 LRKILAYSSIAHMGWMMTILMFCPSMTMLNLFIYL--------MLTITMFTMLNMNTNTTTLTLSSLWSKSPTITTMILV 248
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIinhaiaksLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 712041735 249 SLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIMALLNLYFYMRLIYS 301
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
102-213 |
1.76e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 40.05 E-value: 1.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 102 VALTMKLGMTPFHFWVPEV-----TQGVSLMTGMLLltwqKLAP---ISIMIQMFPSINLNILMLIALLSVLTGGWGGL- 172
Cdd:MTH00204 217 LSLAVKIPQIPFHIWLPQAhveapVAGSVILAGILL----KLGGygfLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLt 292
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 712041735 173 --NQTQLRKILAYSSIAHMGwMMTILMFCPSMTMLNLFIYLML 213
Cdd:MTH00204 293 tcRQVDFKRLIAYSSVAHMG-LVPLGLFTHTIEGLVAAVFLML 334
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
2-193 |
2.27e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 39.69 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 2 KPPILMIIMTTIFMGTMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMFTIVFNAMHS 81
Cdd:PRK02546 113 KPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALAMAFYG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 82 GQWT--ITNIDSNN------MLISSTMIVALTMKLGMTPFHFWVP----EVTQGVSLMTGMLLLTWQKLAPISIMIQMFP 149
Cdd:PRK02546 193 DTPTfdMTALAAKDfglgfqLLCYAGLLIAYGVKLPIVPLHTWLPdahgEATAPVHMLLAGILLKMGGYALLRMNAGMLP 272
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 712041735 150 SINLNILMLIALLSVLTGGWGGLN---QTQLRKILAYSSIAHMGWMM 193
Cdd:PRK02546 273 DAHAQFAPLLIVLGVVNIIYAALTsfaQRNLKRKIAYSSISHMGFVL 319
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
17-301 |
5.48e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 38.64 E-value: 5.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 17 TMLTMISSHWLLIWIGLEINMLSIIPILAKNPKPRSTEAATKYFLTQATASMLLMF---TIVFNAMHSGQWTITNIDSNN 93
Cdd:PRK06589 129 GVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLpavILIYTKTGNLDFVSGGLFSKN 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 94 M-LISSTMIVALTMKLGMTPFHFWVPE-----------------VTQGVSLMTGMLLLTWqKLAPISIMIQMFpsinlNI 155
Cdd:PRK06589 209 QsIILLLMFIYGIAKTAIFPVHSWLPAamvahypvsallhavivVKTGLFCIYKILLYIF-GLSYLQRIFAEF-----NW 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 156 LMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGW-MMTILMFCP---SMTMLNLFIYLMLTITMFTMLNMNTNTT--- 228
Cdd:PRK06589 283 LIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLaLLSAFILTPkalGAAILHLVSHSFAKICLFYSMGSIYSLKked 362
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 712041735 229 -TLTLSSLWSKSPTITTMILVSLLSLGGLPPLTGFLPKWVIIQELTKNNNIIVATMMAIM----ALLNLYFYMRLIYS 301
Cdd:PRK06589 363 qVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVviasSILSALYLLKILSS 440
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-213 |
7.13e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 37.98 E-value: 7.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 100 MIVALTMKLGMTPFHFWVPEV-----TQGVSLMTGMLL-LTWQKLAPISIMIQMFPSINLN-ILMLIALLSVLTGGWGGL 172
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLkLGGYGLVRLSWPILPLGAQNLApAVIAMGIVGIVYGSFATC 315
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 712041735 173 NQTQLRKILAYSSIAHMGwMMTILMFCPSMTMLNLFIYLML 213
Cdd:MTH00226 316 RQIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIML 355
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
113-196 |
9.44e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 38.02 E-value: 9.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 113 FHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFP-----SINLNILMLIALLSVLTGGWGGLNQTQLRKILAYSSIA 187
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPlfekaPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
....*....
gi 712041735 188 HMGWMMTIL 196
Cdd:MTH00032 324 QLGYMVLII 332
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-218 |
9.75e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 37.82 E-value: 9.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 712041735 82 GQWTITNI---DSNNMLISSTMIVALTmKLGMTPFHFWVPEVTQGVSLMTGMLLLTWQKLAPISIMIQMFPSIN-----L 153
Cdd:MTH00207 165 GHWSITNMwqtDMNNYIALSIMIAAMT-KSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSstywfN 243
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 712041735 154 NILMLIALLSVLTGGWGGLNQTQLRKILAYSSIAHMGWMMTILmfcpSMTMLNLFIYLMLTITMF 218
Cdd:MTH00207 244 PALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASL----GLGMPKLALFHLITHALF 304
|
|
|