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Conserved domains on  [gi|70724949|ref|YP_254681|]
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cytochrome b (mitochondrion) [Leptotrombidium pallidum]

Protein Classification

cytochrome b/b6( domain architecture ID 11475928)

cytochrome b/b6 (PetB) is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme; cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes; in plants and cyanobacteria, cytochrome b6 is analogous to cytochrome b and contains two chains: helices A-D (encoded by petB) and helices E-H (encoded by petD)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 5-352 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 523.19  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949    5 LKSELKDILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSS--ENAFDSVIHISRDVSMGMAMRSIHANGASFF 82
Cdd:MTH00156   1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTAdiELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   83 FIIIYTHIFRGIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSV 162
Cdd:MTH00156  81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  163 GMPTLSRFFSLHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYML 242
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  243 MDPDNFSPANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILLPLMIKRKMNMK---FSPHMKINMSILVF 319
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRgnqFYPINKILFWIFVN 320

                        330       340       350
                 ....*....|....*....|....*....|...
gi 70724949  320 SFVLLTWIGAMPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFI 353
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 5-352 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 523.19  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949    5 LKSELKDILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSS--ENAFDSVIHISRDVSMGMAMRSIHANGASFF 82
Cdd:MTH00156   1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTAdiELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   83 FIIIYTHIFRGIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSV 162
Cdd:MTH00156  81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  163 GMPTLSRFFSLHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYML 242
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  243 MDPDNFSPANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILLPLMIKRKMNMK---FSPHMKINMSILVF 319
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRgnqFYPINKILFWIFVN 320

                        330       340       350
                 ....*....|....*....|....*....|...
gi 70724949  320 SFVLLTWIGAMPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFI 353
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
5-352 2.91e-109

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 324.44  E-value: 2.91e-109
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   5 LKSELKDILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHY--SSENAFDSVIHISRDVSMGMAMRSIHANGASFF 82
Cdd:COG1290  20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYkpSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  83 FIIIYTHIFRGIMASSFKK--SITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGF 160
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYKKprELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949 161 SVGMPTLSRFFSLH-FILPLLIAGISIIHLLSLHTTGSSNPIG----SKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSIS 235
Cdd:COG1290 180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLA 259

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949 236 LKFPymLMDPDNFSPANPMNTPIHIQPEWYFLFAYAILRSIP--NKLGGVIALIFSVIIL--LPLMIKRK-MNMKFSPHM 310
Cdd:COG1290 260 FFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLflLPFLDRSPvRSPRYRPVR 337

                       330       340       350       360
                ....*....|....*....|....*....|....*....|..
gi 70724949 311 KINMSILVFSFVLLTWIGAMPPeaPYSFFGVWGGVTFFLSFL 352
Cdd:COG1290 338 TALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFL 377
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 5-198 1.57e-68

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 213.38  E-value: 1.57e-68
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   5 LKSELKDILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSS--ENAFDSVIHISRDVSMGMAMRSIHANGASFF 82
Cdd:cd00284   3 LIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPdvTLAFSSVQYIMRDVNFGWLIRSLHANGASMF 82

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  83 FIIIYTHIFRGIMASSFKKS--ITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGF 160
Cdd:cd00284  83 FLMLYLHIFRGLYYGSYKKPreLTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGF 162

                       170       180       190
                ....*....|....*....|....*....|....*...
gi 70724949 161 SVGMPTLSRFFSLHFILPLLIAGISIIHLLSLHTTGSS 198
Cdd:cd00284 163 SVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
12-196 6.91e-60

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 191.06  E-value: 6.91e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949    12 ILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSSE--NAFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTH 89
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDvtLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949    90 IFRGIMASSFKKS--ITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTL 167
Cdd:pfam00033  81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 70724949   168 SRFFSLHFILPLLIAGISIIHLLSLHTTG 196
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 220-329 4.77e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 54.80  E-value: 4.77e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   220 DLLFlIFTSLIFFSISLKFPYMLMDPDNF-SPANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILLPLMI 298
Cdd:TIGR01156  35 DLLY-IFPVVILGTIACVVGLAVLDPAMIgEPANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPF 113

                          90       100       110
                  ....*....|....*....|....*....|..
gi 70724949   299 KRKMNMKFSPHMK-INMSILVFSFVLLTWIGA 329
Cdd:TIGR01156 114 IENVNKFQNPFRRpVATTVFLFGTVVALWLGI 145
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 5-352 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 523.19  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949    5 LKSELKDILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSS--ENAFDSVIHISRDVSMGMAMRSIHANGASFF 82
Cdd:MTH00156   1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTAdiELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   83 FIIIYTHIFRGIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSV 162
Cdd:MTH00156  81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  163 GMPTLSRFFSLHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYML 242
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  243 MDPDNFSPANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILLPLMIKRKMNMK---FSPHMKINMSILVF 319
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRgnqFYPINKILFWIFVN 320

                        330       340       350
                 ....*....|....*....|....*....|...
gi 70724949  320 SFVLLTWIGAMPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFI 353
CYTB MTH00145
cytochrome b; Provisional
 12-352 6.91e-166

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 467.85  E-value: 6.91e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   12 ILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSS--ENAFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTH 89
Cdd:MTH00145  19 LYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAhvDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLH 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   90 IFRGIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSR 169
Cdd:MTH00145  99 IGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKR 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  170 FFSLHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDNFS 249
Cdd:MTH00145 179 FFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFI 258

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  250 PANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIIL--LPLMIKRKM-NMKFSPHMKINMSILVFSFVLLTW 326
Cdd:MTH00145 259 PANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILffLPLLHVGKFrSLSFYPLNQVLFWIFVGNFFILTW 338

                        330       340
                 ....*....|....*....|....*.
gi 70724949  327 IGAMPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00145 339 IGACPVEEPYETIGQVFTVLYFLFFL 364
CYTB MTH00191
cytochrome b; Provisional
 15-352 2.02e-158

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 448.21  E-value: 2.02e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   15 LPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSS--ENAFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTHIFR 92
Cdd:MTH00191  18 LPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTAdiSLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGR 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   93 GIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSRFFS 172
Cdd:MTH00191  98 GLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFT 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  173 LHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDNFSPAN 252
Cdd:MTH00191 178 FHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPAN 257

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  253 PMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIIL--LPLMIKRKMN-MKFSPHMKINMSILVFSFVLLTWIGA 329
Cdd:MTH00191 258 PLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLflLPLLHTSKQRsNTFRPLTQVVFWLWVANFILLTWLGG 337

                        330       340
                 ....*....|....*....|...
gi 70724949  330 MPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00191 338 QPVEDPFILLGQISSFLYFFLFL 360
CYTB MTH00119
cytochrome b; Provisional
 15-352 3.98e-155

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 440.49  E-value: 3.98e-155
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   15 LPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSSEN--AFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTHIFR 92
Cdd:MTH00119  22 LPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADIslAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGR 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   93 GIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSRFFS 172
Cdd:MTH00119 102 GLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFA 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  173 LHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDNFSPAN 252
Cdd:MTH00119 182 LHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPAN 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  253 PMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILL--PLMIKRKM-NMKFSPHMKINMSILVFSFVLLTWIGA 329
Cdd:MTH00119 262 PLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFlmPFLHTSKQrSMTFRPLSQLLFWTLVANLLILTWIGS 341

                        330       340
                 ....*....|....*....|...
gi 70724949  330 MPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00119 342 QPVEHPFIIIGQLASILYFTILL 364
CYTB MTH00131
cytochrome b; Provisional
 15-352 1.64e-146

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 418.67  E-value: 1.64e-146
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   15 LPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSSE--NAFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTHIFR 92
Cdd:MTH00131  21 LPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDisTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGR 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   93 GIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSRFFS 172
Cdd:MTH00131 101 GLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFA 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  173 LHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDNFSPAN 252
Cdd:MTH00131 181 FHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPAN 260

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  253 PMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILL--PLMIKRKM-NMKFSPHMKINMSILVFSFVLLTWIGA 329
Cdd:MTH00131 261 PLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMvvPILHTSKQrGLTFRPLTQFLFWTLVADVLILTWIGG 340

                        330       340
                 ....*....|....*....|...
gi 70724949  330 MPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00131 341 MPVEHPFIIIGQVASVLYFSLFL 363
CYTB MTH00016
cytochrome b; Validated
 12-352 6.14e-146

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 417.16  E-value: 6.14e-146
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   12 ILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYS--SENAFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTH 89
Cdd:MTH00016  19 LVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTphIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLH 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   90 IFRGIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSR 169
Cdd:MTH00016  99 IGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTR 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  170 FFSLHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDNFS 249
Cdd:MTH00016 179 FFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFI 258

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  250 PANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIIL--LPLMIKRKM-NMKFSPHMKINMSILVFSFVLLTW 326
Cdd:MTH00016 259 PANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILffLPFIFKQKFrGLSFYPLNQILFWLLVSNFLLLTW 338

                        330       340
                 ....*....|....*....|....*.
gi 70724949  327 IGAMPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00016 339 IGGRPVEPPYEFLGQIFTVFYFFYFM 364
CYTB MTH00100
cytochrome b; Provisional
 15-352 1.28e-143

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 411.34  E-value: 1.28e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   15 LPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSSE--NAFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTHIFR 92
Cdd:MTH00100  21 LPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDttTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGR 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   93 GIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSRFFS 172
Cdd:MTH00100 101 GLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFA 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  173 LHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDNFSPAN 252
Cdd:MTH00100 181 FHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPAN 260

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  253 PMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILL--PLMIKRKM-NMKFSPHMKINMSILVFSFVLLTWIGA 329
Cdd:MTH00100 261 PLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAiiPLLHTSKQrSMMFRPLSQCLFWLLVADLLTLTWIGG 340

                        330       340
                 ....*....|....*....|...
gi 70724949  330 MPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00100 341 QPVEHPFIIIGQLASILYFLIIL 363
CYTB MTH00074
cytochrome b; Provisional
 15-352 1.37e-141

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 405.99  E-value: 1.37e-141
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   15 LPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSSEN--AFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTHIFR 92
Cdd:MTH00074  22 LPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTssAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGR 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   93 GIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSRFFS 172
Cdd:MTH00074 102 GLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFA 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  173 LHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDNFSPAN 252
Cdd:MTH00074 182 FHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPAN 261

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  253 PMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIIL--LPLMIKRKM-NMKFSPHMKINMSILVFSFVLLTWIGA 329
Cdd:MTH00074 262 PLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILmlIPMLHTSKQrSLMFRPLTQILFWLLVANTLILTWIGG 341

                        330       340
                 ....*....|....*....|...
gi 70724949  330 MPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00074 342 QPVEDPFIEIGQAASILYFLLFI 364
CYTB MTH00034
cytochrome b; Validated
 14-352 4.06e-136

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 392.15  E-value: 4.06e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   14 SLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSSEN--AFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTHIF 91
Cdd:MTH00034  20 DLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADIslAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIG 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   92 RGIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSRFF 171
Cdd:MTH00034 100 RGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFF 179

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  172 SLHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDNFSPA 251
Cdd:MTH00034 180 AFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPA 259

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  252 NPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILL--PLMIKRKMNMK-FSPHMKINMSILVFSFVLLTWIG 328
Cdd:MTH00034 260 NPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFlvPILHTSNNQSStFRPLSQIAFWLLIATFFILTWIG 339

                        330       340
                 ....*....|....*....|....
gi 70724949  329 AMPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00034 340 SQPVEYPFILLGQVASVLYFSLFL 363
CYTB MTH00053
cytochrome b; Provisional
 12-352 2.29e-129

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 375.20  E-value: 2.29e-129
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   12 ILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSSEN--AFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTH 89
Cdd:MTH00053  19 FIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVnlAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFH 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   90 IFRGIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSR 169
Cdd:MTH00053  99 IGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNR 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  170 FFSLHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDNFS 249
Cdd:MTH00053 179 FYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFK 258

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  250 PANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIIL--LPLMIKRKMN-MKFSPHMKINMSILVFSFVLLTW 326
Cdd:MTH00053 259 QANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLffLPYLHKSRFRgLSFRPLSKILFWFLVGDFFLLTW 338

                        330       340
                 ....*....|....*....|....*.
gi 70724949  327 IGAMPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00053 339 IGGQPVEEPYILIGQIASIFYFAYFL 364
CYTB MTH00022
cytochrome b; Validated
 12-352 3.79e-128

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 372.11  E-value: 3.79e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   12 ILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSSEN--AFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTH 89
Cdd:MTH00022  17 LVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVslAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIH 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   90 IFRGIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSR 169
Cdd:MTH00022  97 IGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNR 176

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  170 FFSLHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDNFS 249
Cdd:MTH00022 177 FFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFI 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  250 PANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIIL--LPLMIKRKM-NMKFSPHMKINMSILVFSFVLLTW 326
Cdd:MTH00022 257 QANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILffLPLLHTSWLrGLTFRPLGRMAFWFLIVDFILLTW 336

                        330       340
                 ....*....|....*....|....*.
gi 70724949  327 IGAMPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00022 337 IGSQVVEEPFILIGQLLSFFYFFYFL 362
CYTB MTH00224
cytochrome b; Provisional
 12-352 2.21e-123

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 360.01  E-value: 2.21e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   12 ILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSS--ENAFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTH 89
Cdd:MTH00224  19 LIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPniEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLH 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   90 IFRGIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSR 169
Cdd:MTH00224  99 VGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNR 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  170 FFSLHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDNFS 249
Cdd:MTH00224 179 FFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFL 258

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  250 PANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILLPLMIKRKMN---MKFSPHMKINMSILVFSFVLLTW 326
Cdd:MTH00224 259 MANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNkrsLPFYPLNQLLFWLLVTSWAILTW 338

                        330       340
                 ....*....|....*....|....*.
gi 70724949  327 IGAMPPEAPYSFFGVWGGVTFFLSFL 352
Cdd:MTH00224 339 IGGRPVEDPFEGIGQVFTILYFSYFI 364
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
5-352 2.91e-109

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 324.44  E-value: 2.91e-109
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   5 LKSELKDILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHY--SSENAFDSVIHISRDVSMGMAMRSIHANGASFF 82
Cdd:COG1290  20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYkpSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  83 FIIIYTHIFRGIMASSFKK--SITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGF 160
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYKKprELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949 161 SVGMPTLSRFFSLH-FILPLLIAGISIIHLLSLHTTGSSNPIG----SKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSIS 235
Cdd:COG1290 180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLA 259

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949 236 LKFPymLMDPDNFSPANPMNTPIHIQPEWYFLFAYAILRSIP--NKLGGVIALIFSVIIL--LPLMIKRK-MNMKFSPHM 310
Cdd:COG1290 260 FFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLflLPFLDRSPvRSPRYRPVR 337

                       330       340       350       360
                ....*....|....*....|....*....|....*....|..
gi 70724949 311 KINMSILVFSFVLLTWIGAMPPeaPYSFFGVWGGVTFFLSFL 352
Cdd:COG1290 338 TALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFL 377
CYTB MTH00086
cytochrome b; Provisional
 12-339 1.52e-107

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 318.81  E-value: 1.52e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   12 ILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYS--SENAFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTH 89
Cdd:MTH00086   7 VVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTadSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLH 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   90 IFRGIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSR 169
Cdd:MTH00086  87 IFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKF 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  170 FFSLHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTsLIFFSISLKFPYMLMDPDNFS 249
Cdd:MTH00086 167 FFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFW-LVFIIFSLFYPFNLGDPEMFI 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  250 PANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILLPLMIKRKMNMKFSPHMKINMSILVFSFVLLTWIGA 329
Cdd:MTH00086 246 EADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTSCLNKLNKFLVFSFIVVNVILSWLGQ 325

                        330
                 ....*....|
gi 70724949  330 MPPEAPYSFF 339
Cdd:MTH00086 326 CLVEYPFLFL 335
CYTB MTH00033
cytochrome b; Provisional
 2-352 1.07e-104

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 312.64  E-value: 1.07e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949    2 KNSLKSELKDILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSSEN--AFDSVIHISRDVSMGMAMRSIHANGA 79
Cdd:MTH00033   5 KTGLLEPVNDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVslAFSSVAHIVRDVNYGWILRYVHANGA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   80 SFFFIIIYTHIFRGIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGG 159
Cdd:MTH00033  85 SLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGG 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  160 FSVGMPTLSRFFSLHFILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLL--FLIFTSLIFFSISLK 237
Cdd:MTH00033 165 FSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILgfLILFGVFVIIGIEPR 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  238 FPYMLMDPDNFSPANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILL--PLMIKRKM-NMKFSPHMKINM 314
Cdd:MTH00033 245 IETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLlmPILDRSKIrSLTFNPTGKFFF 324

                        330       340       350
                 ....*....|....*....|....*....|....*....
gi 70724949  315 SILVFSFVLLTWIGAMPPEA-PYSFFGVWGGVTFFLSFL 352
Cdd:MTH00033 325 WFIVGDFIILTWIGSAPAGAdPYVLIGRIATIFYFGYFL 363
CYTB MTH00046
cytochrome b; Validated
 11-338 1.18e-73

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 231.80  E-value: 1.18e-73
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   11 DILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSSEN--AFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYT 88
Cdd:MTH00046   8 NLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSlcSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFI 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   89 HIFRGIMASSFKKSITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLS 168
Cdd:MTH00046  88 HMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  169 RFFSLHFILPLLIAGISIIHLLSLHTTGSSNPI-GSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDN 247
Cdd:MTH00046 168 RVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLfSSNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEA 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  248 FSPANPMNTPIHIQPEWYFLFAYAILRSIPNKLGG-VIALIFSVIILLPlmiKRKMNMKFSPHMKINMSILVFSFVLLTW 326
Cdd:MTH00046 248 YLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGlVLVLSFLFFLWVP---TFNGSSVYSVWRQVNFWLIVSLFFSLSY 324

                        330
                 ....*....|..
gi 70724949  327 IGAMPPEAPYSF 338
Cdd:MTH00046 325 LGGCHPEYPYLL 336
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 5-198 1.57e-68

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 213.38  E-value: 1.57e-68
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   5 LKSELKDILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSS--ENAFDSVIHISRDVSMGMAMRSIHANGASFF 82
Cdd:cd00284   3 LIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPdvTLAFSSVQYIMRDVNFGWLIRSLHANGASMF 82

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  83 FIIIYTHIFRGIMASSFKKS--ITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGF 160
Cdd:cd00284  83 FLMLYLHIFRGLYYGSYKKPreLTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGF 162

                       170       180       190
                ....*....|....*....|....*....|....*...
gi 70724949 161 SVGMPTLSRFFSLHFILPLLIAGISIIHLLSLHTTGSS 198
Cdd:cd00284 163 SVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
12-196 6.91e-60

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 191.06  E-value: 6.91e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949    12 ILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHYSSE--NAFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTH 89
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDvtLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949    90 IFRGIMASSFKKS--ITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTL 167
Cdd:pfam00033  81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 70724949   168 SRFFSLHFILPLLIAGISIIHLLSLHTTG 196
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 199-340 4.35e-38

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 133.15  E-value: 4.35e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949 199 NPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISLKFPYMLMDPDNFSPANPMNTPIHIQPEWYFLFAYAILRSIPN 278
Cdd:cd00290   1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 70724949 279 KLGGVIALIFSVIILL--PLMIKRKMNMKFSPHMKINMSILVFSFVLLTWIGAMPPEAPYSFFG 340
Cdd:cd00290  81 KLLGVLAMAASILSLFlvPFLENSNKRSQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLIL 144
PRK03735 PRK03735
cytochrome b6; Provisional
 33-201 1.37e-35

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 129.06  E-value: 1.37e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   33 IILVLQILSGLFISMHY--SSENAFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYTHIFRGIMASSFKK--SITWASG 108
Cdd:PRK03735  50 FCFVIQILSGMFLTMYYvpDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKprELNWVVG 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  109 EAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPTLSRFFSLH-FILPLLIAGISII 187
Cdd:PRK03735 130 VLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLA 209

                        170
                 ....*....|....
gi 70724949  188 HLLSLHTTGSSNPI 201
Cdd:PRK03735 210 HFLMIRKQGISGPL 223
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
80-245 1.74e-35

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 126.97  E-value: 1.74e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949    80 SFFFIIIYTHIFRGIMASSFKK--SITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLW 157
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKprELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   158 GGFSVGMPTLSRFFSLHF-ILPLLIAGISIIHLLSLHTTGSSNPIGSKSDQDKIDFHPYFSLKDLLFLIFTSLIFFSISL 236
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 70724949   237 KFPYMLMDP 245
Cdd:pfam13631 161 INPIWLGGP 169
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
250-347 2.90e-31

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 113.73  E-value: 2.90e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   250 PANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIIL--LPLMIKRKMN-MKFSPHMKINMSILVFSFVLLTW 326
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILflLPWLDRSPVRsIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 70724949   327 IGAMPPEAPYSFFGVWGGVTF 347
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
petB CHL00070
cytochrome b6
 11-201 6.10e-30

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 114.05  E-value: 6.10e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   11 DILSLPTPVSISYWWNMGSMLGIILVLQILSGLFISMHY--SSENAFDSVIHISRDVSMGMAMRSIHANGASFFFIIIYT 88
Cdd:CHL00070  20 DITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYrpTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMIL 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   89 HIFRGIMASSFKK--SITWASGEAMFLMLMGAAFLGYVLPWGQMSFWGATVITSLASAIPLVGKDIVEWLWGGFSVGMPT 166
Cdd:CHL00070 100 HVFRVYLTGGFKKprELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQST 179

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 70724949  167 LSRFFSLH-FILPLLIAGISIIHLLSLHTTGSSNPI 201
Cdd:CHL00070 180 LTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 212-332 7.05e-13

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 65.59  E-value: 7.05e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949 212 FHPYFSLKDLLFlIFTSLIFFSISLKFPYMLMDPDNFS-PANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSV 290
Cdd:COG5679  28 YGEPAWPNDLLY-IFPVVILGTIALCIGLAVLDPAMMGePADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIP 106

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 70724949 291 IILLPLMIKRKMNmKFSPHMKINMSILVFSF--VLLTW--IGAMPP 332
Cdd:COG5679 107 LGLMLVPFIENVN-KFQNPFRRPVATAVFLFgtLVTLWlgIGAALP 151
petD CHL00058
cytochrome b6/f complex subunit IV
 220-332 7.58e-10

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 56.93  E-value: 7.58e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949  220 DLLFlIFTSLIFFSISLKFPYMLMDPDNF-SPANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILL--PL 296
Cdd:CHL00058  35 DLLY-IFPVVILGTIACNVGLAVLEPSMIgEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLtvPF 113

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 70724949  297 M--IKRKMNMKFSPhmkINMSILVFSFVLLTW--IGAMPP 332
Cdd:CHL00058 114 LenVNKFQNPFRRP---VATTVFLIGTAVALWlgIGATLP 150
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 220-329 4.77e-09

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 54.80  E-value: 4.77e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 70724949   220 DLLFlIFTSLIFFSISLKFPYMLMDPDNF-SPANPMNTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIFSVIILLPLMI 298
Cdd:TIGR01156  35 DLLY-IFPVVILGTIACVVGLAVLDPAMIgEPANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPF 113

                          90       100       110
                  ....*....|....*....|....*....|..
gi 70724949   299 KRKMNMKFSPHMK-INMSILVFSFVLLTWIGA 329
Cdd:TIGR01156 114 IENVNKFQNPFRRpVATTVFLFGTVVALWLGI 145
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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