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Conserved domains on  [gi|704000374|sp|T1W425|]
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RecName: Full=Apolipoprotein C-II; Short=Apo-CII; Short=ApoC-II; AltName: Full=Apolipoprotein C2; Contains: RecName: Full=Proapolipoprotein C-II; Short=ProapoC-II; Flags: Precursor

Protein Classification

Apo-CII domain-containing protein( domain architecture ID 10526552)

Apo-CII domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Apo-CII pfam05355
Apolipoprotein C-II; Apolipoprotein C-II (ApoC-II) is the major activator of lipoprotein ...
 24-100 1.78e-41

Apolipoprotein C-II; Apolipoprotein C-II (ApoC-II) is the major activator of lipoprotein lipase, a key enzyme in the regulation of triglyceride levels in human serum.


:

Pssm-ID: 428437  Cd Length: 77  Bit Score: 130.72  E-value: 1.78e-41
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 704000374   24 DMARQDEATGPTLLSQMQESLYGYWGSAKAAAQDLYEKTYLTAMDEKIRDMYSTSTAAVRIYTGILTDQILSMLTGD 100
Cdd:pfam05355   1 HEPQQDEATSPALLTQVQESLLSYWDSAKAAAQDLYQKTYLPTVDEKIRDMYSKSTAAVSTYAGIFTDQLLSLLKGE 77
 
Name Accession Description Interval E-value
Apo-CII pfam05355
Apolipoprotein C-II; Apolipoprotein C-II (ApoC-II) is the major activator of lipoprotein ...
 24-100 1.78e-41

Apolipoprotein C-II; Apolipoprotein C-II (ApoC-II) is the major activator of lipoprotein lipase, a key enzyme in the regulation of triglyceride levels in human serum.


Pssm-ID: 428437  Cd Length: 77  Bit Score: 130.72  E-value: 1.78e-41
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 704000374   24 DMARQDEATGPTLLSQMQESLYGYWGSAKAAAQDLYEKTYLTAMDEKIRDMYSTSTAAVRIYTGILTDQILSMLTGD 100
Cdd:pfam05355   1 HEPQQDEATSPALLTQVQESLLSYWDSAKAAAQDLYQKTYLPTVDEKIRDMYSKSTAAVSTYAGIFTDQLLSLLKGE 77
 
Name Accession Description Interval E-value
Apo-CII pfam05355
Apolipoprotein C-II; Apolipoprotein C-II (ApoC-II) is the major activator of lipoprotein ...
 24-100 1.78e-41

Apolipoprotein C-II; Apolipoprotein C-II (ApoC-II) is the major activator of lipoprotein lipase, a key enzyme in the regulation of triglyceride levels in human serum.


Pssm-ID: 428437  Cd Length: 77  Bit Score: 130.72  E-value: 1.78e-41
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 704000374   24 DMARQDEATGPTLLSQMQESLYGYWGSAKAAAQDLYEKTYLTAMDEKIRDMYSTSTAAVRIYTGILTDQILSMLTGD 100
Cdd:pfam05355   1 HEPQQDEATSPALLTQVQESLLSYWDSAKAAAQDLYQKTYLPTVDEKIRDMYSKSTAAVSTYAGIFTDQLLSLLKGE 77
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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