|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
10-270 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 561.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 10 MANLRKTHPLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIR 89
Cdd:MTH00131 1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 90 NMHANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSL 169
Cdd:MTH00131 81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 170 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALV 249
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
250 260
....*....|....*....|.
gi 702101336 250 SLALFSPNLLGDPDNFTPANP 270
Cdd:MTH00131 241 SLALFSPNLLGDPDNFTPANP 261
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
18-215 |
3.02e-91 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 268.47 E-value: 3.02e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 18 PLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGAS 97
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 98 FFFICIYLHIGRGLYYGSY--LYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWIWG 175
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 702101336 176 GFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSN 215
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
31-270 |
4.88e-90 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 272.05 E-value: 4.88e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 31 PAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRG 110
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 111 LYYGSylYKE----TWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWIWGGFSVDNATLTR 186
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 187 FFAF-HFLFPFVIAAATLVHLIFLHETGSNNPTG----LNSDADKISFHPYFSYKDLLGFAALLIALVSLALFSPNllGD 261
Cdd:COG1290 189 FFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
....*....
gi 702101336 262 PDNFTPANP 270
Cdd:COG1290 267 PPNYGPANP 275
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
27-213 |
1.38e-84 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 251.15 E-value: 1.38e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 27 LVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 106
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 107 IGRGLYYG--SYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWIWGGFSVDNATL 184
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 702101336 185 TRFFAFHFLFPFVIAAATLVHLIFLHETG 213
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
10-270 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 561.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 10 MANLRKTHPLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIR 89
Cdd:MTH00131 1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 90 NMHANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSL 169
Cdd:MTH00131 81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 170 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALV 249
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
250 260
....*....|....*....|.
gi 702101336 250 SLALFSPNLLGDPDNFTPANP 270
Cdd:MTH00131 241 SLALFSPNLLGDPDNFTPANP 261
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
12-270 |
1.30e-180 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 501.35 E-value: 1.30e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 12 NLRKTHPLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNM 91
Cdd:MTH00119 4 NLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 92 HANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQ 171
Cdd:MTH00119 84 HANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 172 WIWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALVSL 251
Cdd:MTH00119 164 WIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTL 243
|
250
....*....|....*....
gi 702101336 252 ALFSPNLLGDPDNFTPANP 270
Cdd:MTH00119 244 ALFSPNLLGDPENFTPANP 262
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
10-270 |
1.94e-178 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 496.13 E-value: 1.94e-178
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 10 MANLRKTHPLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIR 89
Cdd:MTH00074 2 AHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 90 NMHANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSL 169
Cdd:MTH00074 82 NIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 170 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALV 249
Cdd:MTH00074 162 VQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALA 241
|
250 260
....*....|....*....|.
gi 702101336 250 SLALFSPNLLGDPDNFTPANP 270
Cdd:MTH00074 242 LLSLFSPNLLGDPDNFTPANP 262
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
10-270 |
1.96e-177 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 493.39 E-value: 1.96e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 10 MANLRKTHPLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIR 89
Cdd:MTH00100 1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 90 NMHANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSL 169
Cdd:MTH00100 81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 170 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALV 249
Cdd:MTH00100 161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240
|
250 260
....*....|....*....|.
gi 702101336 250 SLALFSPNLLGDPDNFTPANP 270
Cdd:MTH00100 241 LLVLFSPDLLGDPDNYTPANP 261
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
13-270 |
8.68e-175 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 486.34 E-value: 8.68e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 13 LRKTHPLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMH 92
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 93 ANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQW 172
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 173 IWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALVSLA 252
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250
....*....|....*...
gi 702101336 253 LFSPNLLGDPDNFTPANP 270
Cdd:MTH00191 241 LFSPNLLGDPENFIPANP 258
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
20-270 |
2.68e-168 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 469.26 E-value: 2.68e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 20 LKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFF 99
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 100 FICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWIWGGFSV 179
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 180 DNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALVSLALFSPNLL 259
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250
....*....|.
gi 702101336 260 GDPDNFTPANP 270
Cdd:MTH00156 241 GDPENFIPANP 251
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
13-270 |
9.07e-162 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 453.59 E-value: 9.07e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 13 LRKTHPLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMH 92
Cdd:MTH00145 5 LRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 93 ANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQW 172
Cdd:MTH00145 85 ANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 173 IWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALVSLA 252
Cdd:MTH00145 165 VWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLV 244
|
250
....*....|....*...
gi 702101336 253 LFSPNLLGDPDNFTPANP 270
Cdd:MTH00145 245 LFFPNLLGDPENFIPANP 262
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
13-270 |
3.67e-157 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 442.22 E-value: 3.67e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 13 LRKTHPLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMH 92
Cdd:MTH00034 4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 93 ANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQW 172
Cdd:MTH00034 84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 173 IWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALVSLA 252
Cdd:MTH00034 164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLA 243
|
250
....*....|....*...
gi 702101336 253 LFSPNLLGDPDNFTPANP 270
Cdd:MTH00034 244 LLFPTALNDPENFIPANP 261
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
13-270 |
1.76e-153 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 432.95 E-value: 1.76e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 13 LRKTHPLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMH 92
Cdd:MTH00016 5 MRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 93 ANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQW 172
Cdd:MTH00016 85 ANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 173 IWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALVSLA 252
Cdd:MTH00016 165 LWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVV 244
|
250
....*....|....*...
gi 702101336 253 LFSPNLLGDPDNFTPANP 270
Cdd:MTH00016 245 LLWPNILGDPENFIPANP 262
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
13-270 |
1.27e-131 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 377.34 E-value: 1.27e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 13 LRKTHPLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMH 92
Cdd:MTH00224 5 FRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 93 ANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQW 172
Cdd:MTH00224 85 ANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 173 IWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALVSLA 252
Cdd:MTH00224 165 IWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMV 244
|
250
....*....|....*...
gi 702101336 253 LFSPNLLGDPDNFTPANP 270
Cdd:MTH00224 245 LFEPNLFTDPENFLMANP 262
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
13-270 |
1.33e-128 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 369.80 E-value: 1.33e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 13 LRKTHPLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMH 92
Cdd:MTH00022 3 LRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLH 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 93 ANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQW 172
Cdd:MTH00022 83 ANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 173 IWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALVSLA 252
Cdd:MTH00022 163 VWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIV 242
|
250
....*....|....*...
gi 702101336 253 LFSPNLLGDPDNFTPANP 270
Cdd:MTH00022 243 YFAPNLLGDPENFIQANS 260
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
13-270 |
3.13e-120 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 348.62 E-value: 3.13e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 13 LRKTHPLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMH 92
Cdd:MTH00053 5 IRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 93 ANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQW 172
Cdd:MTH00053 85 ANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 173 IWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALVSLA 252
Cdd:MTH00053 165 VWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIV 244
|
250
....*....|....*...
gi 702101336 253 LFSPNLLGDPDNFTPANP 270
Cdd:MTH00053 245 FLFPYSLGDAENFKQANP 262
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
13-270 |
3.14e-94 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 282.60 E-value: 3.14e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 13 LRKTHpLLKIANDaLVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMH 92
Cdd:MTH00033 3 LRKTG-LLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 93 ANGASFFFICIYLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQW 172
Cdd:MTH00033 81 ANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 173 IWGGFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALVSLA 252
Cdd:MTH00033 161 IWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG 240
|
250 260
....*....|....*....|
gi 702101336 253 LFS--PNLLGDPDNFTPANP 270
Cdd:MTH00033 241 IEPriETLLQDPENFIQANP 260
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
18-215 |
3.02e-91 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 268.47 E-value: 3.02e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 18 PLLKIANDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGAS 97
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 98 FFFICIYLHIGRGLYYGSY--LYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWIWG 175
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 702101336 176 GFSVDNATLTRFFAFHFLFPFVIAAATLVHLIFLHETGSN 215
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
24-270 |
6.19e-91 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 272.97 E-value: 6.19e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 24 NDALVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICI 103
Cdd:MTH00086 4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 104 YLHIGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWIWGGFSVDNAT 183
Cdd:MTH00086 84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 184 LTRFFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIaLVSLALFSPNLLGDPD 263
Cdd:MTH00086 164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLV-FIIFSLFYPFNLGDPE 242
|
....*..
gi 702101336 264 NFTPANP 270
Cdd:MTH00086 243 MFIEADP 249
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
31-270 |
4.88e-90 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 272.05 E-value: 4.88e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 31 PAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRG 110
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 111 LYYGSylYKE----TWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWIWGGFSVDNATLTR 186
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 187 FFAF-HFLFPFVIAAATLVHLIFLHETGSNNPTG----LNSDADKISFHPYFSYKDLLGFAALLIALVSLALFSPNllGD 261
Cdd:COG1290 189 FFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
....*....
gi 702101336 262 PDNFTPANP 270
Cdd:COG1290 267 PPNYGPANP 275
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
27-213 |
1.38e-84 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 251.15 E-value: 1.38e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 27 LVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 106
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 107 IGRGLYYG--SYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWIWGGFSVDNATL 184
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 702101336 185 TRFFAFHFLFPFVIAAATLVHLIFLHETG 213
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
27-270 |
7.55e-63 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 200.98 E-value: 7.55e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 27 LVDLPAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 106
Cdd:MTH00046 9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 107 IGRGLYYGSYLYKETWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWIWGGFSVDNATLTR 186
Cdd:MTH00046 89 MGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 187 FFAFHFLFPFVIAAATLVHLIFLHETGSNNPTGL-NSDADKISFHPYFSYKDLLGFAALLIALVSLALFSPNLLGDPDNF 265
Cdd:MTH00046 169 VFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAY 248
|
....*
gi 702101336 266 TPANP 270
Cdd:MTH00046 249 LEADP 253
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
97-262 |
2.32e-47 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 155.48 E-value: 2.32e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 97 SFFFICIYLHIGRGLYYGSYLYKE--TWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWIW 174
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 175 GGFSVDNATLTRFFAF-HFLFPFVIAAATLVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGFAALLIALVSLAL 253
Cdd:pfam13631 81 GGPFPGTATIPRFYALhILLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 702101336 254 FSPNLLGDP 262
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
31-186 |
4.61e-35 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 125.59 E-value: 4.61e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 31 PAPANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRG 110
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 702101336 111 LYYGSYLYKE--TWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWIWGGFSVDNATLTR 186
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTR 190
|
|
| petB |
CHL00070 |
cytochrome b6 |
33-217 |
2.94e-29 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 110.20 E-value: 2.94e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 33 PANISVWWNFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRGLY 112
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702101336 113 YGSYLYKE--TWNVGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVQWIWGGFSVDNATLTRFFAF 190
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 702101336 191 HFLFPFVIAAA-TLVHLIFLHETGSNNP 217
Cdd:CHL00070 187 HTFVLPLLTAVfMLMHFLMIRKQGISGP 214
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
216-270 |
2.15e-13 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 65.74 E-value: 2.15e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 702101336 216 NPTGLNSDADKISFHPYFSYKDLLGFAALLIALVSLALFSPNLLGDPDNFTPANP 270
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANP 55
|
|
|