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Conserved domains on  [gi|702076396|gb|AIW06214|]
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ATP synthase F0 subunit 6 (mitochondrion) [Siphlonurus sp. MT-2014]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 7.43e-120

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 339.45  E-value: 7.43e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   1 MTNLFSVFDPSSSvMNLSLNWLSTFLGILLIPSAFWLMPSRYSMIWGKVTSTLHKEFSTLLGPTgHPGSTFIFISLFSLI 80
Cdd:MTH00157   2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  81 LFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVR 160
Cdd:MTH00157  80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 702076396 161 LAANMIAGHLLMTLLGNTGPSLSLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 224
Cdd:MTH00157 160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 7.43e-120

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 339.45  E-value: 7.43e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   1 MTNLFSVFDPSSSvMNLSLNWLSTFLGILLIPSAFWLMPSRYSMIWGKVTSTLHKEFSTLLGPTgHPGSTFIFISLFSLI 80
Cdd:MTH00157   2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  81 LFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVR 160
Cdd:MTH00157  80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 702076396 161 LAANMIAGHLLMTLLGNTGPSLSLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 224
Cdd:MTH00157 160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-224 4.28e-53

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 170.46  E-value: 4.28e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396    4 LFSVFDPSSSVM-NLSLNWLSTFLGILLI----PSAFWLMPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGSTFIFiSLFS 78
Cdd:TIGR01131   1 LFSQFDISPITLfSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   79 LILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 158
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 702076396  159 VRLAANMIAGHLLMTLLGNTGPSL-SLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 224
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 72-221 1.64e-46

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 151.01  E-value: 1.64e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  72 IFISLFSLILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNV 151
Cdd:cd00310    7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396 152 IRPGTLAVRLAANMIAGHLLMTLLGNTGPSLSLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSS 221
Cdd:cd00310   87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
21-221 7.47e-32

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 115.28  E-value: 7.47e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   21 WLSTFLGILLIPSAFW----LMPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGSTFIFISLFSLILFNNFLGLF---PYIF 93
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   94 TSSSHLTFTLALALPLWLSFMIYGWINH-TQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLAANMIAGHLLM 172
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 702076396  173 TLLGNTGPSLSLTILSFLII---GQIALLVLESAVAIIQSYVFAVLSTLYSS 221
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 75-219 1.34e-26

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 101.69  E-value: 1.34e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  75 SLFSLILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINH-TQHMFAHLVPQGTPPvLMPFMVCIETISNVIR 153
Cdd:COG0356   63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELAR 141

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 702076396 154 PGTLAVRLAANMIAGHLLMTLLGNTGPSLSLTILSFLIigQIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:COG0356  142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 7.43e-120

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 339.45  E-value: 7.43e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   1 MTNLFSVFDPSSSvMNLSLNWLSTFLGILLIPSAFWLMPSRYSMIWGKVTSTLHKEFSTLLGPTgHPGSTFIFISLFSLI 80
Cdd:MTH00157   2 MTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  81 LFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVR 160
Cdd:MTH00157  80 LFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVR 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 702076396 161 LAANMIAGHLLMTLLGNTGPSLSLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 224
Cdd:MTH00157 160 LAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-223 2.30e-53

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 170.98  E-value: 2.30e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   1 MTNLFSVFDPSSSVM--NLSLNWLSTFLGILLIPSAFWLMPSRYSMIWGKVtSTLHKEFSTLLGPTGHPGSTFIFISLFS 78
Cdd:MTH00176   2 LVDLFSSFDPPNKNIfsMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMF-STFLPEMILRSNGSYILGSASIIISLFI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  79 LILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 158
Cdd:MTH00176  81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 702076396 159 VRLAANMIAGHLLMTLLGNTGPSL---SLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSEV 223
Cdd:MTH00176 161 VRLAANLSAGHLLLGLLGAAMWGLlpvSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 4-224 4.28e-53

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 170.46  E-value: 4.28e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396    4 LFSVFDPSSSVM-NLSLNWLSTFLGILLI----PSAFWLMPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGSTFIFiSLFS 78
Cdd:TIGR01131   1 LFSQFDISPITLfSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   79 LILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 158
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 702076396  159 VRLAANMIAGHLLMTLLGNTGPSL-SLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 224
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLmSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 72-221 1.64e-46

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 151.01  E-value: 1.64e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  72 IFISLFSLILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNV 151
Cdd:cd00310    7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396 152 IRPGTLAVRLAANMIAGHLLMTLLGNTGPSLSLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSS 221
Cdd:cd00310   87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-222 2.26e-43

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 145.65  E-value: 2.26e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   1 MTNLFSVFDPSSSVMNLSLN----WLSTFLGILLIPSAFWLMPSRYSMIWGKVTSTLHKEFSTLLGpTGHPGSTFIFISL 76
Cdd:MTH00005   2 LTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISAL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  77 FSLILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGT 156
Cdd:MTH00005  81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 702076396 157 LAVRLAANMIAGHLLMTLLGNTGPSL---SLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00005 161 LSFRLAANMSAGHIVLSLIGIYAASAlfsSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-222 1.08e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 138.85  E-value: 1.08e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   1 MTNLFSVFDPSSSVMNL--SLNWLSTFLGILLIPSAFWLMPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGSTFIFiSLFS 78
Cdd:MTH00173   2 MVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLS-SLFL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  79 LILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 158
Cdd:MTH00173  81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 702076396 159 VRLAANMIAGHLLMTLLGNTGPSL----SLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00173 161 VRLLANISAGHIVLTLIGNYLSSSlfssSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-222 1.30e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 138.54  E-value: 1.30e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   1 MTNLFSVFDpSSSVMNLSLNWLSTFLGILLIPS-AFWLMPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGStFIFISLFSL 79
Cdd:MTH00179   2 MLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSlTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLMLF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  80 ILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAV 159
Cdd:MTH00179  80 LLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGV 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396 160 RLAANMIAGHLLMTL-------LGNTGPSLSLTILSFLIIgqiaLLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00179 160 RLTANITAGHLLMHLissavfvLMNFMGMVALLTLLVLFL----LTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-222 7.62e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 136.49  E-value: 7.62e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   1 MTNLFSVFDpSSSVMNLSLNWLSTFLGILLIPSA-FWLMPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGSTfIFISLFSL 79
Cdd:MTH00120   2 NLNFFDQFS-SPELLGIPLILLAMLIPALLIPSPkNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWAL-ILTSLMLL 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  80 ILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAV 159
Cdd:MTH00120  80 LLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGV 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396 160 RLAANMIAGHLLMTL-------LGNTGPSLSLTILSFLIIgqiaLLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00120 160 RLTANLTAGHLLIQListatlnLLPTMPTLSLLTLIILLL----LTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 2-222 1.29e-37

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 130.86  E-value: 1.29e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   2 TNLFSVFDPSSsVMNLSLNWLSTFLGI---LLIPSAFWLmPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGSTFIFiSLFS 78
Cdd:MTH00035   5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLT-TVFI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  79 LILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 158
Cdd:MTH00035  82 LILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALG 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 702076396 159 VRLAANMIAGHLLMTLLGNT----GPSLSLTILSFLIIgqIALLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00035 162 LRLAANLTAGHLLIFLLSTAiwelSNSPLISIITLIIF--FLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 3-219 7.80e-36

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 125.83  E-value: 7.80e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   3 NLFSVFDpSSSVMNLSLNWLSTFLGILLIPSAFWLMPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGStfifISLFSLILF 82
Cdd:MTH00101   4 NLFASFI-TPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWS----LMLMSLILF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  83 ---NNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAV 159
Cdd:MTH00101  79 igsTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 702076396 160 RLAANMIAGHLLMTLLGN-----TGPSLSLTILSFLIIgqIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:MTH00101 159 RLTANITAGHLLIHLIGGatlalMSISTTTALITFIIL--ILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 24-222 5.44e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 118.82  E-value: 5.44e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  24 TFLGILLI-------------PSAFWLMpSRYSMIWGKVTSTLHKEFSTLLGPTGHPGSTfIFISLFSLILFNNFLGLFP 90
Cdd:MTH00132  13 TYLGIPLIalaltlpwilfptPTSRWLN-NRLLTLQGWFINRFTQQLLLPLNVGGHKWAL-LLTSLMLFLITLNMLGLLP 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  91 YIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLAANMIAGHL 170
Cdd:MTH00132  91 YTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVRLTANLTAGHL 170

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 702076396 171 LMTLLGNTG-------PSLSLTILSFLIIgqiaLLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00132 171 LIQLIATAAfvllplmPTVAILTATLLFL----LTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-222 7.57e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 118.15  E-value: 7.57e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   1 MTNLFSVFdPSSSVMNLSLNWLSTFLGILLIPSAF--WLmPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGStFIFISLFS 78
Cdd:MTH00073   2 NLSFFDQF-LSPTLLGIPLIMLAMLLPWLLFPTPTnkWL-NNRLSTLQIWFLQNFTKQLMLPLNTPGHKWA-LILTSLMV 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  79 LILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 158
Cdd:MTH00073  79 FLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALG 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 702076396 159 VRLAANMIAGHLLMTLLGNTGPSL-----SLTILSFLIIgqIALLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00073 159 VRLTANLTAGHLLIQLISTATLVLlplmpTVSILTMIVL--FLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
21-221 7.47e-32

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 115.28  E-value: 7.47e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   21 WLSTFLGILLIPSAFW----LMPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGSTFIFISLFSLILFNNFLGLF---PYIF 93
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396   94 TSSSHLTFTLALALPLWLSFMIYGWINH-TQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLAANMIAGHLLM 172
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 702076396  173 TLLGNTGPSLSLTILSFLII---GQIALLVLESAVAIIQSYVFAVLSTLYSS 221
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 16-219 8.33e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 102.81  E-value: 8.33e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  16 NLSLNWLSTFLGILLIPSAFWLMPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGSTFIfISLFSLILFNNFLGLFPYIFTS 95
Cdd:MTH00172  19 NSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVFTP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  96 SSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLAANMIAGHLLMTLL 175
Cdd:MTH00172  98 TTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAIL 177

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 702076396 176 GNTGPSLsLTILSFLIIGQIALLV----LESAVAIIQSYVFAVLSTLY 219
Cdd:MTH00172 178 AGFGFNM-LCASGFLSLFPLLIMVfitlLEIAVAVIQAYVFCLLTTIY 224
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 75-219 1.34e-26

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 101.69  E-value: 1.34e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  75 SLFSLILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINH-TQHMFAHLVPQGTPPvLMPFMVCIETISNVIR 153
Cdd:COG0356   63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELAR 141

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 702076396 154 PGTLAVRLAANMIAGHLLMTLLGNTGPSLSLTILSFLIigQIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:COG0356  142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 16-219 8.21e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 100.47  E-value: 8.21e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  16 NLSLNWLSTFLGILLIPSAFWLMPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGSTFIFiSLFSLILFNNFLGLFPYIFTS 95
Cdd:MTH00175  30 NSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIAILNILGLFPYVFTP 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  96 SSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLAANMIAGHLLMTLL 175
Cdd:MTH00175 109 TAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAIL 188

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 702076396 176 gnTGPSLSLTILSFLIIGQIALL------VLESAVAIIQSYVFAVLSTLY 219
Cdd:MTH00175 189 --SGFAFNMLSNGLIILSLFPMLimifitLLEMAVAVIQAYVFCLLTTIY 236
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 72-219 3.27e-21

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 87.93  E-value: 3.27e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  72 IFISLFSLILFNNFLGLFP-YIFTSSSHLTFTLALALPLWLSFMIYG-WINHTQHMFAHLVPQgtppvLMPFMVCIETIS 149
Cdd:PRK05815  75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIIS 149

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396 150 NVIRPGTLAVRLAANMIAGHLLMTLLGNTGPSLSLTILSFLIIGqIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:PRK05815 150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 74-219 4.33e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 79.98  E-value: 4.33e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  74 ISLFSLILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIR 153
Cdd:MTH00174  95 LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISR 174

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396 154 PGTLAVRLAANMIAGHLLMTLLGNTGPSL---SLTILSFLIIG-QIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:MTH00174 175 AISLGVRLAANISSGHLLFSIIASFAWKMintGILIGSFVPFAiLIFVTILEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 74-219 2.74e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 67.85  E-value: 2.74e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  74 ISLFSLILFNNFLGLFPYIFTSSSHLTFTLALALplwLSFMIYGWINHTQH----MFAHLVpQGTPPVLMPFMVCIETIS 149
Cdd:PRK13419 175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFIG 250

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396 150 NVIRPGTLAVRLAANMIAGHLLMtllgntgpsLSLTILSFLIIGQIALLV-----------LESAVAIIQSYVFAVLSTL 218
Cdd:PRK13419 251 LFTKPFALTVRLFANMTAGHIVI---------LSLIFISFILKSYIVAVAvsvpfaifiylLELFVAFLQAYIFTMLSAL 321


                 .
gi 702076396 219 Y 219
Cdd:PRK13419 322 F 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 94-219 1.81e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 56.82  E-value: 1.81e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  94 TSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETI-SNVIRPGTLAVRLAANMIAGH-LL 171
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvII 296

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 702076396 172 MTLLGNTGPSLSLTILSFLIIGQIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:PRK13417 297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 67-222 2.56e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 54.98  E-value: 2.56e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  67 PGSTFIFISLFSLILFNNFLGLFPYIFTSSSHLTFTLALALPLWLSFMIYGWINhtQHMFAHLVPQGTPPVLMPF-MVCI 145
Cdd:MTH00087  49 PLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSK--SEKFSVYLSKGSDSFLKTFsMLFV 126

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 702076396 146 ETISNVIRPGTLAVRLAANMIAGHLLMTLLGNTGpslsltilSFLIIGQIALLVLESAVAIIQSYVFAVLSTLYSSE 222
Cdd:MTH00087 127 EIVSELSRPLALTLRLTVNLMVGHLISSLLNFLG--------EKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 11-219 1.03e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 53.59  E-value: 1.03e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  11 SSSVMNLSLNWLSTFLGILLIPSAFWLMPSRYSMIWGKVTSTLHKEFSTLLgpTGHPGSTFIFI-SLFSLILFNNFLGLF 89
Cdd:PRK13420  17 TESVLTTWGIMIVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVL--PRHARLVLPFVgTLWIFILVANLIGLI 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  90 PYIFTSSSHLTFTLALALPLWLSFMIYG-----WINHTQHmfaHLVPQgtpPVLMPFMVcietISNVIRPGTLAVRLAAN 164
Cdd:PRK13420  95 PGFHSPTADLSVTAALALLVFFSVHWFGiraegLREYLKH---YLSPS---PFLLPFHL----ISEITRTLALAVRLFGN 164

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 702076396 165 MIaghllmtllgntgpSLSLTILSFLIIG----QIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:PRK13420 165 IM--------------SLELAALLVLLVAgflvPVPILMLHIIEALVQAYIFGMLALIY 209
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 79-177 7.25e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 41.79  E-value: 7.25e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  79 LILFNNFLGL-FPYIFTSSSHLTFTLALALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTL 157
Cdd:MTH00050  31 FIVLFLFLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVL 110

                         90       100
                 ....*....|....*....|
gi 702076396 158 AVRLAANMIAGHLLMTLLGN 177
Cdd:MTH00050 111 ILRPFINISLGCFGGVALGN 130
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 26-219 4.60e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 36.98  E-value: 4.60e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396  26 LGILLIPSAFWLMPSRYSMIWGKVTSTLHKEFSTLLGPTGHPGSTFIFiSLFSLILFNNFLGLFPYIFTSSSHLTFTLAL 105
Cdd:PRK13421  35 AGSALATRRLSLAPGRLQSVLELVVTTIDAQIRDTMQTDPAPYRALIG-TLFLFVLVANWSSLVPGVEPPTAHLETDAAL 113

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 702076396 106 ALPLWLSFMIYGWinHTQHMFAHLVPQGTPPVLMPFMVCIETISnviRPGTLAVRLAANMIAGHLLMtllgntGPSLSLT 185
Cdd:PRK13421 114 ALIVFLATIYYGV--RARGVRGYLATFAEPTWVMIPLNLVEQLT---RTFSLIVRLFGNVMSGVFVI------GIVLSLA 182

                        170       180       190
                 ....*....|....*....|....*....|....
gi 702076396 186 ILsfliIGQIALLVLESAVAIIQSYVFAVLSTLY 219
Cdd:PRK13421 183 GL----LVPIPLMALDLLTGAVQAYIFAVLAMVF 212
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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