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Conserved domains on  [gi|699976709|gb|AIU45570|]
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NADH dehydrogenase subunit 5, partial (mitochondrion) [Anabrus simplex]

Protein Classification

NADH dehydrogenase subunit 5( domain architecture ID 11475935)

NADH dehydrogenase subunit 5 (ND5/NADH5) is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain; the immediate electron acceptor for the enzyme is believed to be ubiquinone

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-213 2.38e-79

NADH dehydrogenase subunit 5; Provisional


:

Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 247.36  E-value: 2.38e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00165 313 GSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYS 392

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSMICLPITLKLLALIVSVLGGWFGYEV 160
Cdd:MTH00165 393 FRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYEL 472

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 699976709 161 SKFSLSYNLLSLKVFMMSNFLGSMWFMPFISTYGVSYLPLFLGKQVFKTMDQG 213
Cdd:MTH00165 473 SLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQG 525
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-213 2.38e-79

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 247.36  E-value: 2.38e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00165 313 GSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYS 392

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSMICLPITLKLLALIVSVLGGWFGYEV 160
Cdd:MTH00165 393 FRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYEL 472

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 699976709 161 SKFSLSYNLLSLKVFMMSNFLGSMWFMPFISTYGVSYLPLFLGKQVFKTMDQG 213
Cdd:MTH00165 473 SLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQG 525
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
 79-213 2.51e-38

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 130.75  E-value: 2.51e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   79 YSLRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSMICLPITLKLLALIVSVLGGWFGY 158
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 699976709  159 EVSKFSLSYNLLSLKvFMMSNFLGSMWFMPFISTYGVSYLPLFLGKQVFKTMDQG 213
Cdd:pfam06455  81 ELSNLSNKQLKKSLN-FNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQG 134
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 1-158 3.96e-22

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 93.68  E-value: 3.96e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMkDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILE-IVSLSYINMFSFFLYFFSTGLTVCY 79
Cdd:COG1009  345 GSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFY 423

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  80 SLRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVM---------FPSPSMICLPITLKLLALIVS 150
Cdd:COG1009  424 SFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLegllapaavLGGELHLAHGLLLNALPLLLS 503


                 ....*...
gi 699976709 151 VLGGWFGY 158
Cdd:COG1009  504 LLGIALGY 511
 
Name Accession Description Interval E-value
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
 1-213 2.38e-79

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 247.36  E-value: 2.38e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00165 313 GSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYS 392

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSMICLPITLKLLALIVSVLGGWFGYEV 160
Cdd:MTH00165 393 FRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYEL 472

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 699976709 161 SKFSLSYNLLSLKVFMMSNFLGSMWFMPFISTYGVSYLPLFLGKQVFKTMDQG 213
Cdd:MTH00165 473 SLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQG 525
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
 1-213 4.19e-47

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 163.01  E-value: 4.19e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00207 313 GSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYS 392

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSMICLPITLKLLALIVSVLGGWFGYEV 160
Cdd:MTH00207 393 TRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLF 472

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 699976709 161 SKFSLSYNLLSLKVFMMSNFLGSMWFMPFISTYGVSYLPLFLGKQVFKTMDQG 213
Cdd:MTH00207 473 TTPNITKTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQG 525
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
 1-213 4.02e-44

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 154.62  E-value: 4.02e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00151 310 GSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYS 389

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSMICLPITLKLLALIVSVLGGWFGYev 160
Cdd:MTH00151 390 ARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSF-- 467

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 699976709 161 skFSLSYNLLSLKVFMMSNFLGSMWFMPFISTYGVSYLPLFLGKQVFKTMDQG 213
Cdd:MTH00151 468 --GFWDSGFSSSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMG 518
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
 1-213 2.29e-43

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 152.49  E-value: 2.29e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00209 309 GNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYS 388

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSMICLPITLKLLALIVSVLGGWFGYEV 160
Cdd:MTH00209 389 MRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMV 468

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 699976709 161 SKfslsYNLLSLKVFMMSNFLGSMWFMPFISTYGVSYLPLFLGKQVFKTMDQG 213
Cdd:MTH00209 469 LK----KNFFLIKGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQG 517
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
 79-213 2.51e-38

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 130.75  E-value: 2.51e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   79 YSLRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSMICLPITLKLLALIVSVLGGWFGY 158
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 699976709  159 EVSKFSLSYNLLSLKvFMMSNFLGSMWFMPFISTYGVSYLPLFLGKQVFKTMDQG 213
Cdd:pfam06455  81 ELSNLSNKQLKKSLN-FNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQG 134
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
 1-186 3.05e-35

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 130.67  E-value: 3.05e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00004 343 GSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYS 422

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPS-PSMICLPITLKLLALIVSVLGGWFGYE 159
Cdd:MTH00004 423 LRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALE 502

                        170       180
                 ....*....|....*....|....*..
gi 699976709 160 VSKfsLSYNLLSLKVFMMSNFLGSMWF 186
Cdd:MTH00004 503 LSN--MTTTLTPPKQNTLHNFSNQLAF 527
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
 1-213 5.41e-34

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 127.39  E-value: 5.41e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00208 370 GSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYS 449

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSMIcLPITLKLLALIVSVLGGWFGYEV 160
Cdd:MTH00208 450 FRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLT-LPLILKSLPLIVTIIGAAFSFSF 528

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 699976709 161 SkFSLSYNLLSLKVFmmsNFLGSMWFMPFISTYGVSYLPLFLG-KQVFKTMDQG 213
Cdd:MTH00208 529 L-LSLSSNPINSNFF---SFLSNQWFFVNISHSIIISFSFFTSlFGSTRTLDRG 578
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
 1-190 1.05e-32

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 123.48  E-value: 1.05e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00066 341 GSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYS 420

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSMI-CLPITLKLLALIVSVLGGWFGYE 159
Cdd:MTH00066 421 FRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQIlTMPTFMKLAALLVTLLGLLIALD 500

                        170       180       190
                 ....*....|....*....|....*....|.
gi 699976709 160 VSKFSlSYNLLSLKVFMMSNFLGsmwFMPFI 190
Cdd:MTH00066 501 LAKIT-SKTTPKTKMHSFSNLLA---FFPTI 527
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
 1-213 3.19e-32

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 122.37  E-value: 3.19e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00211 338 GSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYS 417

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSMI-CLPITLKLLALIVSVLGGWFGYE 159
Cdd:MTH00211 418 FRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGLE 497

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 699976709 160 VSKFSLSYNLLSLkvfmmSNFLGSMWFMPFISTYGVSYLPLFLGKQV-FKTMDQG 213
Cdd:MTH00211 498 LVNLTHKQLKTST-----LSFSNMLGYYPPIIHRLLPKLSLKWGQTLsTHLMDLG 547
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
 1-182 1.01e-30

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 118.03  E-value: 1.01e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00108 344 GSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYS 423

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPS--PSMIcLPITLKLLALIVSVLGGWFGY 158
Cdd:MTH00108 424 TRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTtiPQMT-MPLYLKLTALAVTILGFILAL 502

                        170       180
                 ....*....|....*....|....*..
gi 699976709 159 EVSkfSLSYNL---LSLKVFMMSNFLG 182
Cdd:MTH00108 503 ELN--LLTNNLkfkYPSNTFKFSNMLG 527
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
 1-153 7.21e-27

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 107.23  E-value: 7.21e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00137 349 GSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYS 428

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 699976709  81 LRLVYY-SM-TGEFNSTSfhPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPS--PSMiCLPITLKLLALIVSVLG 153
Cdd:MTH00137 429 LRVVFFvSMgHPRFNPLS--PINENNPAVINPIKRLAWGSIIAGLLITSNILPLktPVM-TMPPLLKLAALIVTILG 502
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
 1-158 2.42e-24

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 99.85  E-value: 2.42e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEiVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:PRK06590 351 GSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYS 429

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNSTSFHPlNDEGWVMLKSMLVLVMMAILGG-----CMLSWV-----MFPSPSMICLPITLKLLALIVS 150
Cdd:PRK06590 430 FRLIFLVFHGKEKEKIHHP-HESPAVMTLPLIVLAVLSVFAGalivpPFLGVLpltteLAHGEAEHHLPVWVALLPLVVA 508

                        170
                 ....*....|.
gi 699976709 151 VLG---GWFGY 158
Cdd:PRK06590 509 LAGialAWLLY 519
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
 1-213 3.16e-23

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 96.68  E-value: 3.16e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00020 344 GSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYS 423

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNST--SFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFP----SPSMIclPITLKLLALIVSvLGG 154
Cdd:MTH00020 424 IRLIYLTFLSNTNLKkaVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIWSfqitLPPIV--PLSIKLLPVFLS-LGG 500

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 699976709 155 WFGYEVSKFSLSYNLLSLKVFMMSN---FLGSMWFMPFISTYGVSYLPLFLGKQV-FKTMDQG 213
Cdd:MTH00020 501 IGLVIILYFYSSKTFRVPFSFIGRNsytFLGSAWQFNYILNYFLIKKIWKGGHLIsYRTIDKG 563
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
 1-158 3.96e-22

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 93.68  E-value: 3.96e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMkDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILE-IVSLSYINMFSFFLYFFSTGLTVCY 79
Cdd:COG1009  345 GSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFY 423

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  80 SLRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVM---------FPSPSMICLPITLKLLALIVS 150
Cdd:COG1009  424 SFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLLegllapaavLGGELHLAHGLLLNALPLLLS 503


                 ....*...
gi 699976709 151 VLGGWFGY 158
Cdd:COG1009  504 LLGIALGY 511
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
 1-158 1.43e-20

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 88.91  E-value: 1.43e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00210 345 GSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYS 424

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  81 LRLVYYSMTGEFNST--SFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSMICLPITLKLLALIVSVLGGWFGY 158
Cdd:MTH00210 425 IRLIYLTFITNTNSKkeVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEVVLSNVIPPIVPNSIKMIPLLFSLLGALLAF 504
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
1-92 9.88e-15

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 71.98  E-value: 9.88e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKD--------SQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDlilEIVSLSYI-NMFSFFLYFF 71
Cdd:PRK07376 361 GSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKD---EILGAAFEaNPALWFVGFL 437

                         90       100
                 ....*....|....*....|.
gi 699976709  72 STGLTVCYSLRLVYYSMTGEF 92
Cdd:PRK07376 438 TAGMTAFYMFRMYFLTFEGEF 458
ndhF CHL00025
NADH dehydrogenase subunit 5
 1-93 2.91e-08

NADH dehydrogenase subunit 5


Pssm-ID: 214338 [Multi-domain]  Cd Length: 741  Bit Score: 52.97  E-value: 2.91e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNM--------KDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDlilEIVSLSYINMFSF-FLYFF 71
Cdd:CHL00025 361 GSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKD---EILNDSWLYSPIFaIIAWS 437

                         90       100
                 ....*....|....*....|....
gi 699976709  72 STGLTVCYSLRLvyYSMT--GEFN 93
Cdd:CHL00025 438 TAGLTAFYMFRI--YLLTfeGHLR 459
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
 1-72 3.28e-08

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 52.32  E-value: 3.28e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 699976709    1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFS 72
Cdd:pfam00361 220 GSVIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
 1-213 1.67e-07

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 50.73  E-value: 1.67e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMK-DSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIvSLSYINM---------------- 63
Cdd:MTH00032 360 GSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL-TYSGRNMgipfgssllkiqgdig 438

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  64 ---------------------FSFFLYFFSTGLTVCYSLRLVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGG 122
Cdd:MTH00032 439 ikkddrgsiggpegypsrgsaFAFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGA 518

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709 123 CMLSWVM-----------FPSPSMICLPITLKLLALIVSVLGGWFGYEVSKFSLSYNLLSLKVFMMSNFLGSMWFMPFIS 191
Cdd:MTH00032 519 IFVGYLIqdiligdiehpIVPPLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGGAWQGDHLI 598

                        250       260
                 ....*....|....*....|....
gi 699976709 192 TYGVSyLPLFLGKQ--VFKTMDQG 213
Cdd:MTH00032 599 NKLVA-IPLFSFGHwgIYKTLDRG 621
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
 10-129 4.64e-07

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 49.49  E-value: 4.64e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  10 SQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSK-DLILEIVSLSYINMFSFFLyfFSTGLTVCYSLRLVYYSM 88
Cdd:PRK08375 352 TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIWYRAF 429

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 699976709  89 TGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVM 129
Cdd:PRK08375 430 FGPPPPGSEAPKQEAPLGMLAPSLALALLSLLLGIYAGPLL 470
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
 10-129 2.40e-05

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 44.30  E-value: 2.40e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  10 SQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILeiVSLSYINMFSFFLYFFSTGLTVCYSLRLVYYSMT 89
Cdd:COG1008  356 TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL--LGAFQVNPWLAILAALGLILTAAYLLWMYQRVFF 433

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 699976709  90 GEFNStSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWVM 129
Cdd:COG1008  434 GPLKE-ELAELPDLNPRELAVLAPLAALILLLGLYPQPLL 472
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
 3-86 3.18e-05

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 43.98  E-value: 3.18e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   3 LIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEiVSLSYINMFSFFLYFFSTGLTVCYSLR 82
Cdd:COG0651  346 AIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVR 424


                 ....
gi 699976709  83 LVYY 86
Cdd:COG0651  425 IFGR 428
ND5 MTH00095
NADH dehydrogenase subunit 5; Provisional
 1-135 1.48e-03

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177158 [Multi-domain]  Cd Length: 527  Bit Score: 38.74  E-value: 1.48e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYS 80
Cdd:MTH00095 297 GYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYS 376

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 699976709  81 LRLVYYSMTGEFNSTSFhplNDEGWVMLKSMLVLVMMAILGGCMLSWVMFPSPSM 135
Cdd:MTH00095 377 YRLWKSFFLSFSKVVNV---YSSSVLMNFLSLMLVFFSVFFLWWLNFNLLNLPSL 428
PRK12646 PRK12646
DUF4040 family protein;
10-117 1.86e-03

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 38.58  E-value: 1.86e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  10 SQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILE-IVSLSYINMFSFFLYFFSTG-------LTVCYSL 81
Cdd:PRK12646 369 TRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDaLTQTGQLSQFSLISMIIIVFigviasiFTFTYAL 448

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 699976709  82 RLVYYSMTGEFNSTSFHPLN-DEGWVMLKSMLVLVMM 117
Cdd:PRK12646 449 YMVKEVFWGKYDSKVFTKKNiHEPWLFSLPSLILMVL 485
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
 1-154 2.31e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 38.54  E-value: 2.31e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMkDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLsyINMFSFFLYFFSTGLTVCYS 80
Cdd:PRK08376 372 GAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASF 448

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 699976709  81 LRlVYYSMTGEFNSTSFHPLNDEGWVMLKSMLVLVMMAILGGCMLSWV----MFPSPSMIclpitLKLLALIVSVLGG 154
Cdd:PRK08376 449 VK-VFHTAFFGPPSEKVMNVKEPPKPMLVPMLILAIAIIGMGLFPWQIsdklMAPAAKAL-----EDQGGYISAVLGG 520
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
 1-124 2.35e-03

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 38.26  E-value: 2.35e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   1 GSLIHNMKdSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILeIVSLSYINMFSFFLYfFSTGLTVCYS 80
Cdd:PRK05846 350 GVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL-LGSFQVNPVIAFIAT-TGLILAAVYS 426

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 699976709  81 LRLVYYSMTGEFNSTSfHPLNDEGWVMLKSMLVLVMMAILGGCM 124
Cdd:PRK05846 427 LWLYQRVMFGPVKNEV-AKLKDLNGRELLILLPLVALLLLLGVY 469
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
 10-122 3.37e-03

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 37.89  E-value: 3.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709  10 SQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEI-VSLSYINMFSFFLYFFSTG-----LTVCYSLRL 83
Cdd:PRK12649 363 TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETsVEMGALIGGPFTIIIPAVAvlggvFTFAYSIKL 442

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 699976709  84 VYYSMTGEFNSTSF-HPLNDEGWVMLKSMLVLVMMAILGG 122
Cdd:PRK12649 443 IDGIFLGERTHDHLpHHIHEAPYVMLIPAAFLAGLVILFG 482
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
 4-144 5.17e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 37.10  E-value: 5.17e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976709   4 IHNMKDSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILEIVSLSYINMFSFFLYFFSTGLTVCYSLRL 83
Cdd:PRK06589 355 IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIASSILSALYL 434

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 699976709  84 VyysmtgEFNSTSFHPLNDEGWVMLKSMLVLVMMAILgGCMLSWVMFPSPSMICLPITLKL 144
Cdd:PRK06589 435 L------KILSSIYKPSLSENSFITKSLPYLMQISVI-TCCCALTLFYFIQILIREFLAYI 488
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
 1-54 9.71e-03

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 36.49  E-value: 9.71e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 699976709   1 GSLIHNMKdSQDIRFMGNICSQMPLTAVCFNISNLALCGMPFLAGFYSKDLILE 54
Cdd:PRK12667 368 GVFIHAAG-TRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFN 420
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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