|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
4.19e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 223.48 E-value: 4.19e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00165 313 GSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYS 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMISLPFYLKLLTIFVVCLGSYLGYLI 160
Cdd:MTH00165 393 FRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYEL 472
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 699976689 161 SKLSISYNLFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIGYISFKYFDFG 213
Cdd:MTH00165 473 SLMSLSYNLKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQG 525
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
1.17e-41 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 147.87 E-value: 1.17e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00209 309 GNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYS 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMISLPFYLKLLTIFVVCLGSYLGYLI 160
Cdd:MTH00209 389 MRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMV 468
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 699976689 161 SKlsisYNLFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIGYISFKYFDFG 213
Cdd:MTH00209 469 LK----KNFFLIKGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQG 517
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
1.77e-40 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 144.99 E-value: 1.77e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00151 310 GSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYS 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMISLPFYLKLLTIFVVclgsYLGYLI 160
Cdd:MTH00151 390 ARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVI----LLGLFL 465
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 699976689 161 SKLSISYNLFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIGYISFKYFDFG 213
Cdd:MTH00151 466 SFGFWDSGFSSSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMG 518
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
2.48e-39 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 141.83 E-value: 2.48e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00207 313 GSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYS 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMISLPFYLKLLTIFVVCLGSYLGYLI 160
Cdd:MTH00207 393 TRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLF 472
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 699976689 161 SKLSISYNLFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIGYISFKYFDFG 213
Cdd:MTH00207 473 TTPNITKTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQG 525
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
2.01e-33 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 125.83 E-value: 2.01e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00211 338 GSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYS 417
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMI-SLPFYLKLLTIFVVCLGSYLGYL 159
Cdd:MTH00211 418 FRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGLE 497
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 699976689 160 ISKLsisynLFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIG-YISFKYFDFG 213
Cdd:MTH00211 498 LVNL-----THKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGqTLSTHLMDLG 547
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-180 |
1.00e-30 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 118.03 E-value: 1.00e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00108 344 GSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYS 423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPM--PYMiSLPFYLKLLTIFVVCLGSYLG- 157
Cdd:MTH00108 424 TRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTtiPQM-TMPLYLKLTALAVTILGFILAl 502
|
170 180
....*....|....*....|....*.
gi 699976689 158 ---YLISKLSISYNLFSFNYSNLVSF 180
Cdd:MTH00108 503 elnLLTNNLKFKYPSNTFKFSNMLGY 528
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
1-202 |
4.29e-29 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 113.53 E-value: 4.29e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00208 370 GSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYS 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPyMISLPFYLKLLTIFVVCLGSYLGYLI 160
Cdd:MTH00208 450 FRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSF 528
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 699976689 161 SkLSISYNLFSFNYSNLVSFigsMWFMPFLTTKIISYLPLKI 202
Cdd:MTH00208 529 L-LSLSSNPINSNFFSFLSN---QWFFVNISHSIIISFSFFT 566
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-180 |
3.56e-28 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 110.77 E-value: 3.56e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00066 341 GSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYS 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMI-SLPFYLKLLTIFVVCLGSYLGYL 159
Cdd:MTH00066 421 FRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQIlTMPTFMKLAALLVTLLGLLIALD 500
|
170 180
....*....|....*....|...
gi 699976689 160 ISKLS--ISYNLFSFNYSNLVSF 180
Cdd:MTH00066 501 LAKITskTTPKTKMHSFSNLLAF 523
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
79-213 |
7.85e-28 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 103.78 E-value: 7.85e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 79 YSFRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMISLPFYLKLLTIFVVCLGSYLGY 158
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 699976689 159 LISKLSISYNLFSFNYsNLVSFIGSMWFMPFLTTKIISYLPLKIGYISFKYFDFG 213
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQG 134
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-204 |
7.28e-27 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 107.17 E-value: 7.28e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00004 343 GSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYS 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPM-PYMISLPFYLKLLTIFVVCLGSYLGYL 159
Cdd:MTH00004 423 LRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALE 502
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 699976689 160 ISKLsiSYNLFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIGY 204
Cdd:MTH00004 503 LSNM--TTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQ 545
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-213 |
4.79e-22 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 93.22 E-value: 4.79e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00020 344 GSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYS 423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNFS--VVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLI--FPMPYMISLPFYLKLLTIFVVCLGSYL 156
Cdd:MTH00020 424 IRLIYLTFLSNTNLKkaVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIwsFQITLPPIVPLSIKLLPVFLSLGGIGL 503
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 157 GYLISKLSISY--NLFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIGY-ISFKYFDFG 213
Cdd:MTH00020 504 VIILYFYSSKTfrVPFSFIGRNSYTFLGSAWQFNYILNYFLIKKIWKGGHlISYRTIDKG 563
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-88 |
7.29e-22 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 92.97 E-value: 7.29e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00137 349 GSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYS 428
|
....*....
gi 699976689 81 FRL-FYYSM 88
Cdd:MTH00137 429 LRVvFFVSM 437
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-213 |
3.06e-21 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 90.84 E-value: 3.06e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00210 345 GSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYS 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNFS--VVSSYNDSGYYISFGMFLLLIVVVFGGS-----FLSWLIFPMpymisLPFYLKLLTIFVVCLG 153
Cdd:MTH00210 425 IRLIYLTFITNTNSKkeVFIGVHESSWNITFPLLLLAFGSIFVGYlgkevVLSNVIPPI-----VPNSIKMIPLLFSLLG 499
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 699976689 154 SYLGYLISKLSISYN------LFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIGY-ISFKYFDFG 213
Cdd:MTH00210 500 ALLAFVIYNSMVFLIkisrrgVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHlITYRIIDRG 566
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-160 |
5.02e-20 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 87.34 E-value: 5.02e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:TIGR01974 347 GSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYS 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWLIFPMPYMI-----------SLPFYLKLLTIFV 149
Cdd:TIGR01974 427 FRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKGVLptsaepalehhHVPALEIWSPTAV 506
|
170
....*....|.
gi 699976689 150 VCLGSYLGYLI 160
Cdd:TIGR01974 507 AILGILLAYLL 517
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-160 |
2.16e-19 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 85.60 E-value: 2.16e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILElTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:PRK06590 351 GSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYS 429
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFYYSMSGDNNfSVVSSYNDSGYYISFGMFLLLIVVVFGG-----SFLSWLIFPMPY-----MISLPFYLKLLTIFVV 150
Cdd:PRK06590 430 FRLIFLVFHGKEK-EKIHHPHESPAVMTLPLIVLAVLSVFAGalivpPFLGVLPLTTELahgeaEHHLPVWVALLPLVVA 508
|
170
....*....|
gi 699976689 151 CLGSYLGYLI 160
Cdd:PRK06590 509 LAGIALAWLL 518
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-160 |
2.27e-19 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 85.59 E-value: 2.27e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLkGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLS-YMNYFIFLLYFISTGLTASY 79
Cdd:COG1009 345 GSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAgGLGPLLLAVALLGAFLTAFY 423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 80 SFRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFGGSFLSWL---------IFPMPYMISLPFYLKLLTIFVV 150
Cdd:COG1009 424 SFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLS 503
|
170
....*....|
gi 699976689 151 CLGSYLGYLI 160
Cdd:COG1009 504 LLGIALGYLL 513
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-91 |
3.04e-15 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 73.52 E-value: 3.04e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGI--------QDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSymNYFIFLLYFIS 72
Cdd:PRK07376 361 GSVIHGMEEVvghdpvlaQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLT 438
|
90
....*....|....*....
gi 699976689 73 TGLTASYSFRLFYYSMSGD 91
Cdd:PRK07376 439 AGMTAFYMFRMYFLTFEGE 457
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-109 |
1.49e-09 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 56.82 E-value: 1.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGI--------QDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLsYMNYFIFLLYFiS 72
Cdd:CHL00025 361 GSVIHSMEPIvgyspdksQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSWL-YSPIFAIIAWS-T 438
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 699976689 73 TGLTASYSFRLFYYSMSGD---NNFSVVSSYNDSGYYISF 109
Cdd:CHL00025 439 AGLTAFYMFRIYLLTFEGHlrvHFQNYSGKKNSSFYSISL 478
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-56 |
4.62e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 55.35 E-value: 4.62e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 699976689 1 GSMIHNLK-GIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELT 56
Cdd:MTH00032 360 GSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELT 416
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-72 |
7.00e-08 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 51.55 E-value: 7.00e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFIS 72
Cdd:pfam00361 220 GSVIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-86 |
5.03e-07 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 49.38 E-value: 5.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLkGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILElTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:COG0651 345 GAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYF 422
|
....*.
gi 699976689 81 FRLFYY 86
Cdd:COG0651 423 VRIFGR 428
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-128 |
4.52e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 46.50 E-value: 4.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 9 GIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILElTCLSYMNYFIFLLYFISTGLTASYSFRLFYYSM 88
Cdd:PRK12667 375 GTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFN-ALLESGFYLPALVLLIASAISLVGYFRAWYSLF 453
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 699976689 89 SGDNNFSVVSSYNDSgYYISFGMFLLLIVVVFGGSFLSWL 128
Cdd:PRK12667 454 FGKPKSGEEVEHKES-PSMSVVILVLALAVLILGILALFL 492
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
1-212 |
1.11e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 45.29 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTASYS 80
Cdd:MTH00095 297 GYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYS 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 81 FRLFyysMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFggsFLSWLIFPMPYMISLPFYLKLLTIFVVCLgsyLGYLI 160
Cdd:MTH00095 377 YRLW---KSFFLSFSKVVNVYSSSVLMNFLSLMLVFFSVF---FLWWLNFNLLNLPSLFLYLDFYVPLFYLF---MIMLF 447
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 699976689 161 SKLSISYNLFSFNYSNLVSFIGSMWFMPFLTTKIISYLPLKIGYISFKYFDF 212
Cdd:MTH00095 448 SFFFFKLLFKELKYKFFVDYFAKNVIYKLKNLKFFDLFLNKFGYKGFNFFSS 499
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-121 |
2.18e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.55 E-value: 2.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHnLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTcLSYMNYFIFLLYFISTGLTASYS 80
Cdd:PRK07691 348 GIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGT-FEAGFYVSGIIVLLSSLLVLYSV 425
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 699976689 81 FRLFYYSMSGDNNFSVVSSYNDSGYYISFGMFLLLIVVVFG 121
Cdd:PRK07691 426 IKIFLKGFWGEPKGYDLNNKVPVKKLLLPAVVLVAITILYG 466
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-129 |
2.39e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 41.24 E-value: 2.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 1 GSMIHNLkGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLsyMNYFIFLLYFISTGLTASYS 80
Cdd:PRK08376 372 GAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASF 448
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 699976689 81 FRLFYYSMSGDNNFSVVSSyNDSGYYISFGMFLLLIVVVFGGSFlSWLI 129
Cdd:PRK08376 449 VKVFHTAFFGPPSEKVMNV-KEPPKPMLVPMLILAIAIIGMGLF-PWQI 495
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-86 |
5.39e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 40.25 E-value: 5.39e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 699976689 9 GIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYfISTGLTASYSFRLFYY 86
Cdd:PRK08375 351 GTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLL-ASSLLALLYFLRIWYR 427
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
16-53 |
1.26e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 39.11 E-value: 1.26e-03
10 20 30
....*....|....*....|....*....|....*...
gi 699976689 16 MGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLIL 53
Cdd:PRK12668 327 LGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
9-83 |
1.36e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 39.26 E-value: 1.36e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 699976689 9 GIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLSYMNYFIFLLYFISTGLTA----SYSFRL 83
Cdd:PRK12650 352 GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAvftfAYSARL 430
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
9-82 |
1.60e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 39.02 E-value: 1.60e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 699976689 9 GIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTC----LSYMNYFIFLLYFISTGLTASYSFR 82
Cdd:PRK12648 351 GTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLdthlLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
9-54 |
2.17e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 38.36 E-value: 2.17e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 699976689 9 GIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILE 54
Cdd:PRK12647 339 GTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYE 384
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
9-88 |
3.13e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 38.20 E-value: 3.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 9 GIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILE-LTCLSYMNYFIFLLYFISTGLTASYSFRLFYYS 87
Cdd:PRK12646 368 GTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDaLTQTGQLSQFSLISMIIIVFIGVIASIFTFTYA 447
|
.
gi 699976689 88 M 88
Cdd:PRK12646 448 L 448
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-96 |
4.04e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 37.49 E-value: 4.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699976689 4 IHNLKGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILELTCLS---YMNYFIFLLYFISTGLTASYS 80
Cdd:PRK06589 355 IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQnqpWLSIIVMLVVIASSILSALYL 434
|
90
....*....|....*...
gi 699976689 81 FRLFY--YSMSGDNNFSV 96
Cdd:PRK06589 435 LKILSsiYKPSLSENSFI 452
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
11-48 |
4.72e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 37.58 E-value: 4.72e-03
10 20 30
....*....|....*....|....*....|....*...
gi 699976689 11 QDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYS 48
Cdd:PRK07390 363 QDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
11-54 |
5.75e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 37.12 E-value: 5.75e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 699976689 11 QDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILE 54
Cdd:PRK12649 364 RDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
1-54 |
7.95e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 36.63 E-value: 7.95e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 699976689 1 GSMIHNLkGIQDIRFMGGIVNSMPLTSICFNVSSLSLCGIPFLTGFYSKDLILE 54
Cdd:PRK08667 354 GSVVHAT-GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
|
|