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Conserved domains on  [gi|699009303|gb|AIU36093|]
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NADH dehydrogenase subunit I, partial (mitochondrion) [Helioscirtus capsitanus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-119 2.01e-48

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 156.47  E-value: 2.01e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   6 LIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 699009303  86 LMISLFIWSIFPYMTYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLG 114
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-119 2.01e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 156.47  E-value: 2.01e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   6 LIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 699009303  86 LMISLFIWSIFPYMTYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLG 114
NADHdh pfam00146
NADH dehydrogenase;
14-119 2.31e-23

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 91.38  E-value: 2.31e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   14 FLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMISLFIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100
                  ....*....|....*....|....*...
gi 699009303   94 SIFPYMTYM--CSFPYGFLFFLCCTSLS 119
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLG 110
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-119 2.70e-23

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 91.35  E-value: 2.70e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   5 DLIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVF 84
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 699009303  85 NLMISLFIWSIFPY--MTYMCSFPYGFLFFLCCTSLS 119
Cdd:COG1005   87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLG 123
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-119 2.01e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 156.47  E-value: 2.01e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   6 LIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 699009303  86 LMISLFIWSIFPYMTYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLG 114
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-119 7.78e-41

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 137.09  E-value: 7.78e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   7 IMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNL 86
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 699009303  87 MISLFIWSIFPYMTYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00225  81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLN 113
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-119 2.31e-34

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 120.36  E-value: 2.31e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   7 IMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNL 86
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 699009303  87 MISLFIWSIFPYMTYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLN 113
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 6-119 3.13e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 106.75  E-value: 3.13e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   6 LIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 699009303  86 LMISLFIWSIFPYMTYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLS 114
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 2-119 2.99e-27

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 101.99  E-value: 2.99e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   2 MMYDLIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFS 81
Cdd:MTH00134   1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 699009303  82 PVFNLMISLFIWSIFPYMTYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLA 118
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 6-119 4.05e-27

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 101.53  E-value: 4.05e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   6 LIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 699009303  86 LMISLFIWSIFPYMTYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLG 114
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 7-118 6.79e-27

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 101.01  E-value: 6.79e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   7 IMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNL 86
Cdd:MTH00010   3 ISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82

                         90       100       110
                 ....*....|....*....|....*....|..
gi 699009303  87 MISLFIWSIFPYMTYMCSFPYGFLFFLCCTSL 118
Cdd:MTH00010  83 ILALLLWSLYPHKHPSFFLKFSILLFLCVSSM 114
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 4-119 8.87e-27

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 100.82  E-value: 8.87e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   4 YDLIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPV 83
Cdd:MTH00040   1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 699009303  84 FNLMISLFIWSIFPYMTYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00040  81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLS 116
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 3-118 1.24e-26

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 100.36  E-value: 1.24e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   3 MYDLIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSP 82
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 699009303  83 VFNLMISLFIWSIFPYMTYMCSFPYGFLFFLCCTSL 118
Cdd:MTH00111  81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSM 116
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 8-119 3.41e-26

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 98.93  E-value: 3.41e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   8 MFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLM 87
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110
                 ....*....|....*....|....*....|..
gi 699009303  88 ISLFIWSIFPYMTYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLA 112
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 3-118 5.19e-26

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 98.54  E-value: 5.19e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   3 MYDLIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSP 82
Cdd:MTH00071   1 MMTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 699009303  83 VFNLMISLFIWSIFPYMTYMCSFPYGFLFFLCCTSL 118
Cdd:MTH00071  81 TMALTLALIIWTPLPMPNNLSNLNLGILFILALSSL 116
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-119 7.99e-26

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 98.27  E-value: 7.99e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   2 MMYDLIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFS 81
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 699009303  82 PVFNLMISLFIWSIFPYM--TYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSIS 120
NADHdh pfam00146
NADH dehydrogenase;
14-119 2.31e-23

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 91.38  E-value: 2.31e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   14 FLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMISLFIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100
                  ....*....|....*....|....*...
gi 699009303   94 SIFPYMTYM--CSFPYGFLFFLCCTSLS 119
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLG 110
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 5-119 2.70e-23

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 91.35  E-value: 2.70e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   5 DLIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVF 84
Cdd:COG1005    7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 699009303  85 NLMISLFIWSIFPY--MTYMCSFPYGFLFFLCCTSLS 119
Cdd:COG1005   87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLG 123
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 6-98 7.20e-23

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 90.56  E-value: 7.20e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   6 LIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:MTH00054   1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                         90
                 ....*....|...
gi 699009303  86 LMISLFIWSIFPY 98
Cdd:MTH00054  81 LTLAFIAWGVIPY 93
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-119 7.74e-20

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 82.16  E-value: 7.74e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   6 LIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 699009303  86 LMISLFIWSIFPYMTY--MCSFPYGFLFFLCCTSLS 119
Cdd:PRK06076  89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLG 124
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-119 3.77e-19

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 80.45  E-value: 3.77e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   1 MMMYDLIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYF 80
Cdd:MTH00029   1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 699009303  81 SPVFNLMISLFIWSI--FPYMTYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00029  81 APIISFTLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLS 121
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 12-114 3.38e-18

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 77.25  E-value: 3.38e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303  12 NFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMISLF 91
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100
                 ....*....|....*....|...
gi 699009303  92 IWSIFPYMTYMCSFPYGFLFFLC 114
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLC 103
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 7-119 4.84e-12

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 60.71  E-value: 4.84e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   7 IMFVLNFFLLVVCVLIsVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNL 86
Cdd:MTH00058   2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 699009303  87 MISLFIWSIFPYMTYMCSFPYGFLFFLCCTSLS 119
Cdd:MTH00058  81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFS 113
ndhA CHL00032
NADH dehydrogenase subunit 1
 4-98 6.93e-08

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 49.18  E-value: 6.93e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009303   4 YDLIMFVLNFFLLVVCVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPV 83
Cdd:CHL00032  24 YGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPS 103

                         90
                 ....*....|....*.
gi 699009303  84 FnLMISLFI-WSIFPY 98
Cdd:CHL00032 104 I-AVISILLsYLVIPF 118
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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