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Conserved domains on  [gi|699009283|gb|AIU36083|]
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NADH dehydrogenase subunit I, partial (mitochondrion) [Sphingonotus pachecoi]

Protein Classification

complex I subunit 1 family protein( domain architecture ID 103)

complex I subunit 1 family protein similar to NADH dehydrogenase subunit 1, which is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

EC:  7.1.1.-
Gene Ontology:  GO:0016655|GO:0016020
PubMed:  23417064|24059520
SCOP:  4005664

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06076 super family cl00469
NADH-quinone oxidoreductase subunit NuoH;
6-119 7.08e-47

NADH-quinone oxidoreductase subunit NuoH;


The actual alignment was detected with superfamily member MTH00193:

Pssm-ID: 469782  Cd Length: 306  Bit Score: 152.62  E-value: 7.08e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   6 LIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 699009283  86 LMISLFIWSIFPYMTYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLG 114
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-119 7.08e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 152.62  E-value: 7.08e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   6 LIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 699009283  86 LMISLFIWSIFPYMTYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLG 114
NADHdh pfam00146
NADH dehydrogenase;
14-119 5.35e-22

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 87.53  E-value: 5.35e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   14 LLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMISLFIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100
                  ....*....|....*....|....*...
gi 699009283   94 SIFPYMTYM--CSFSYGFLFFLCCTSLS 119
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLG 110
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-119 7.08e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 152.62  E-value: 7.08e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   6 LIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 699009283  86 LMISLFIWSIFPYMTYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLG 114
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-119 7.83e-40

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 134.39  E-value: 7.83e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   7 IMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNL 86
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 699009283  87 MISLFIWSIFPYMTYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00225  81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLN 113
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-119 3.42e-33

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 117.28  E-value: 3.42e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   7 IMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNL 86
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 699009283  87 MISLFIWSIFPYMTYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLN 113
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 6-119 1.45e-28

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 105.21  E-value: 1.45e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   6 LIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 699009283  86 LMISLFIWSIFPYMTYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLS 114
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 2-119 7.69e-27

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 100.84  E-value: 7.69e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   2 MMYDLIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFS 81
Cdd:MTH00134   1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 699009283  82 PVFNLMISLFIWSIFPYMTYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00134  81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLA 118
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 4-119 1.79e-26

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 100.05  E-value: 1.79e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   4 YDLIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPV 83
Cdd:MTH00040   1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 699009283  84 FNLMISLFIWSIFPYMTYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00040  81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLS 116
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 8-119 1.82e-26

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 99.70  E-value: 1.82e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   8 MFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLM 87
Cdd:MTH00104   1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                         90       100       110
                 ....*....|....*....|....*....|..
gi 699009283  88 ISLFIWSIFPYMTYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00104  81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLA 112
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 3-118 3.90e-26

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 99.20  E-value: 3.90e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   3 MYDLIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSP 82
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 699009283  83 VFNLMISLFIWSIFPYMTYMCSFSYGFLFFLCCTSL 118
Cdd:MTH00111  81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSM 116
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 6-119 4.50e-26

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 98.83  E-value: 4.50e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   6 LIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 699009283  86 LMISLFIWSIFPYMTYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLG 114
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 3-118 1.64e-25

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 97.38  E-value: 1.64e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   3 MYDLIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSP 82
Cdd:MTH00071   1 MMTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 699009283  83 VFNLMISLFIWSIFPYMTYMCSFSYGFLFFLCCTSL 118
Cdd:MTH00071  81 TMALTLALIIWTPLPMPNNLSNLNLGILFILALSSL 116
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-119 1.94e-25

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 97.11  E-value: 1.94e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   2 MMYDLIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFS 81
Cdd:MTH00216   1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 699009283  82 PVFNLMISLFIWSIFPYM--TYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00216  81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSIS 120
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 7-118 3.10e-25

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 96.39  E-value: 3.10e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   7 IMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNL 86
Cdd:MTH00010   3 ISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82

                         90       100       110
                 ....*....|....*....|....*....|..
gi 699009283  87 MISLFIWSIFPYMTYMCSFSYGFLFFLCCTSL 118
Cdd:MTH00010  83 ILALLLWSLYPHKHPSFFLKFSILLFLCVSSM 114
NADHdh pfam00146
NADH dehydrogenase;
14-119 5.35e-22

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 87.53  E-value: 5.35e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   14 LLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMISLFIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100
                  ....*....|....*....|....*...
gi 699009283   94 SIFPYMTYM--CSFSYGFLFFLCCTSLS 119
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLG 110
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 6-98 1.23e-21

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 87.09  E-value: 1.23e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   6 LIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:MTH00054   1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                         90
                 ....*....|...
gi 699009283  86 LMISLFIWSIFPY 98
Cdd:MTH00054  81 LTLAFIAWGVIPY 93
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-119 7.83e-19

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 79.68  E-value: 7.83e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   1 MMMYDLIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYF 80
Cdd:MTH00029   1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 699009283  81 SPVFNLMISLFIWSI--FPYMTYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00029  81 APIISFTLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLS 121
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-119 8.72e-18

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 76.77  E-value: 8.72e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   6 LIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFN 85
Cdd:PRK06076   9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 699009283  86 LMISLFIWSIFPYMTY--MCSFSYGFLFFLCCTSLS 119
Cdd:PRK06076  89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLG 124
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 12-114 1.28e-17

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 75.71  E-value: 1.28e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283  12 NFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNLMISLF 91
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100
                 ....*....|....*....|...
gi 699009283  92 IWSIFPYMTYMCSFSYGFLFFLC 114
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLC 103
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 10-119 7.57e-11

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 57.24  E-value: 7.57e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283  10 MLNFLLLVVCVLIS---VAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPVFNL 86
Cdd:MTH00058   1 IFGLVSGLEGLLIIlllVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 699009283  87 MISLFIWSIFPYMTYMCSFSYGFLFFLCCTSLS 119
Cdd:MTH00058  81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFS 113
ndhA CHL00032
NADH dehydrogenase subunit 1
 4-98 4.12e-07

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 46.87  E-value: 4.12e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 699009283   4 YDLIMFMLNFLLLVVCVLISVAFLTLLERSVLGYIQIRKGPNKVGFLGIPQPFSDAIKLICKEQPIPFMSNYFLYYFSPV 83
Cdd:CHL00032  24 YGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPS 103

                         90
                 ....*....|....*.
gi 699009283  84 FnLMISLFI-WSIFPY 98
Cdd:CHL00032 104 I-AVISILLsYLVIPF 118
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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