|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-371 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 769.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 1 HPVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGA 80
Cdd:MTH00131 8 HPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 81 SLFFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGG 160
Cdd:MTH00131 88 SFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 161 FSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSP 240
Cdd:MTH00131 168 FSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSP 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 241 NLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWL 320
Cdd:MTH00131 248 NLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWT 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 697870248 321 LVADMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLLAPLAGWLENKTLE 371
Cdd:MTH00131 328 LVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
4-366 |
7.42e-129 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 374.90 E-value: 7.42e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 4 LKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGASLF 83
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 84 FICIYMHIARGLYYGSylYKE----TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWG 159
Cdd:COG1290 100 FAAVYLHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 160 GFSVDNATLTRFFAF-HFLFPFIIAAATILHLLFLHETGSNNPVGI----NSDADKIPFHPYFSYKDLLGFVFMLFGLAS 234
Cdd:COG1290 178 GEFPGDATLNRFFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 235 LALFSPNllGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLFSILILMLVPILHTSKQRGITFRP 312
Cdd:COG1290 258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 697870248 313 LTQLLFWLLVADMLILTWIGGMPVehPFIIIGQITSVIYFAIFLLLAPLAGWLE 366
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-199 |
4.01e-88 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 264.23 E-value: 4.01e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 2 PVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGAS 81
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 82 LFFICIYMHIARGLYYGSY--LYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWG 159
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 697870248 160 GFSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSN 199
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
11-197 |
3.65e-80 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 243.44 E-value: 3.65e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 11 LIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGASLFFICIYMH 90
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 91 IARGLYYG--SYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGGFSVDNATL 168
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 697870248 169 TRFFAFHFLFPFIIAAATILHLLFLHETG 197
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
232-318 |
1.15e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.73 E-value: 1.15e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 232 LASLALFSPNLLGDPdnfipANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITF- 310
Cdd:TIGR01156 51 VVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFr 125
|
....*...
gi 697870248 311 RPLTQLLF 318
Cdd:TIGR01156 126 RPVATTVF 133
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-371 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 769.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 1 HPVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGA 80
Cdd:MTH00131 8 HPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 81 SLFFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGG 160
Cdd:MTH00131 88 SFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 161 FSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSP 240
Cdd:MTH00131 168 FSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSP 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 241 NLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWL 320
Cdd:MTH00131 248 NLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWT 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 697870248 321 LVADMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLLAPLAGWLENKTLE 371
Cdd:MTH00131 328 LVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 696.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 1 HPVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGA 80
Cdd:MTH00119 9 HPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 81 SLFFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGG 160
Cdd:MTH00119 89 SMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 161 FSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSP 240
Cdd:MTH00119 169 FSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 241 NLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWL 320
Cdd:MTH00119 249 NLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWT 328
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 697870248 321 LVADMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLLAPLAGWLENKTL 370
Cdd:MTH00119 329 LVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKML 378
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-371 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 685.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 1 HPVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGA 80
Cdd:MTH00074 9 HPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 81 SLFFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGG 160
Cdd:MTH00074 89 SFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 161 FSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSP 240
Cdd:MTH00074 169 FSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 241 NLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWL 320
Cdd:MTH00074 249 NLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWL 328
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 697870248 321 LVADMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLLAPLAGWLENKTLE 371
Cdd:MTH00074 329 LVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLK 379
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-371 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 673.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 1 HPVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGA 80
Cdd:MTH00100 8 HPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 81 SLFFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGG 160
Cdd:MTH00100 88 SMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 161 FSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSP 240
Cdd:MTH00100 168 FSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSP 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 241 NLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWL 320
Cdd:MTH00100 248 DLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWL 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 697870248 321 LVADMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLLAPLAGWLENKTLE 371
Cdd:MTH00100 328 LVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLK 378
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-361 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 664.31 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 1 HPVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGA 80
Cdd:MTH00191 5 HPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 81 SLFFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGG 160
Cdd:MTH00191 85 SFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 161 FSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSP 240
Cdd:MTH00191 165 FSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSP 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 241 NLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWL 320
Cdd:MTH00191 245 NLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWL 324
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 697870248 321 LVADMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLLAPL 361
Cdd:MTH00191 325 WVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
4-358 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 622.96 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 4 LKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGASLF 83
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 84 FICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGGFSV 163
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 164 DNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSPNLL 243
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 244 GDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWLLVA 323
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 697870248 324 DMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLL 358
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-368 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 615.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 1 HPVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGA 80
Cdd:MTH00034 8 HPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 81 SLFFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGG 160
Cdd:MTH00034 88 SLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 161 FSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSP 240
Cdd:MTH00034 168 FSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFP 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 241 NLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWL 320
Cdd:MTH00034 248 TALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWL 327
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 697870248 321 LVADMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLLAPLAGWLENK 368
Cdd:MTH00034 328 LIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENK 375
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 601.51 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 1 HPVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGA 80
Cdd:MTH00145 9 HPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 81 SLFFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGG 160
Cdd:MTH00145 89 SFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 161 FSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSP 240
Cdd:MTH00145 169 FSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 241 NLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWL 320
Cdd:MTH00145 249 NLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWI 328
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 697870248 321 LVADMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLLaPLAGWLENKTL 370
Cdd:MTH00145 329 FVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLIL-PLVQKLWDNIL 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-358 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 562.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 1 HPVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGA 80
Cdd:MTH00016 9 HPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 81 SLFFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGG 160
Cdd:MTH00016 89 SFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 161 FSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSP 240
Cdd:MTH00016 169 FSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 241 NLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWL 320
Cdd:MTH00016 249 NILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWL 328
|
330 340 350
....*....|....*....|....*....|....*...
gi 697870248 321 LVADMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLL 358
Cdd:MTH00016 329 LVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMIN 366
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-370 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 527.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 1 HPVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGA 80
Cdd:MTH00022 7 NPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 81 SLFFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGG 160
Cdd:MTH00022 87 SLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 161 FSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSP 240
Cdd:MTH00022 167 FSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAP 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 241 NLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWL 320
Cdd:MTH00022 247 NLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWF 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 697870248 321 LVADMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLLAPLAGWLENKTL 370
Cdd:MTH00022 327 LIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLL 376
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
2-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 513.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 2 PVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGAS 81
Cdd:MTH00053 10 PVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGAS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 82 LFFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGGF 161
Cdd:MTH00053 90 MFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGF 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 162 SVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSPN 241
Cdd:MTH00053 170 SVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPY 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 242 LLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWLL 321
Cdd:MTH00053 250 SLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFL 329
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 697870248 322 VADMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLLAPLAGWLENKTL 370
Cdd:MTH00053 330 VGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLL 378
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-357 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 506.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 1 HPVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGA 80
Cdd:MTH00224 9 HPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 81 SLFFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGG 160
Cdd:MTH00224 89 SMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 161 FSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSP 240
Cdd:MTH00224 169 FAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEP 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 241 NLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWL 320
Cdd:MTH00224 249 NLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWL 328
|
330 340 350
....*....|....*....|....*....|....*..
gi 697870248 321 LVADMLILTWIGGMPVEHPFIIIGQITSVIYFAIFLL 357
Cdd:MTH00224 329 LVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFII 365
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
3-367 |
2.66e-137 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 396.23 E-value: 2.66e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 3 VLKIVNDaLIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGASL 82
Cdd:MTH00033 8 LLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 83 FFICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGGFS 162
Cdd:MTH00033 87 FFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFS 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 163 VDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVfMLFGLASLALFSP-- 240
Cdd:MTH00033 167 VSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFL-ILFGVFVIIGIEPri 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 241 -NLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFW 319
Cdd:MTH00033 246 eTLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFW 325
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 697870248 320 LLVADMLILTWIGGMPV-EHPFIIIGQITSVIYFAIFLLLAPLAGWLEN 367
Cdd:MTH00033 326 FIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
4-366 |
7.42e-129 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 374.90 E-value: 7.42e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 4 LKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGASLF 83
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 84 FICIYMHIARGLYYGSylYKE----TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWG 159
Cdd:COG1290 100 FAAVYLHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 160 GFSVDNATLTRFFAF-HFLFPFIIAAATILHLLFLHETGSNNPVGI----NSDADKIPFHPYFSYKDLLGFVFMLFGLAS 234
Cdd:COG1290 178 GEFPGDATLNRFFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 235 LALFSPNllGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLFSILILMLVPILHTSKQRGITFRP 312
Cdd:COG1290 258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 697870248 313 LTQLLFWLLVADMLILTWIGGMPVehPFIIIGQITSVIYFAIFLLLAPLAGWLE 366
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
5-358 |
3.95e-123 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 359.25 E-value: 3.95e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 5 KIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGASLFF 84
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 85 ICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGGFSVD 164
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 165 NATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFgLASLALFSPNLLG 244
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLV-FIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 245 DPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQrgiTFRPLTQLLFWLLVAD 324
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|....
gi 697870248 325 MLILTWIGGMPVEHPFIIIGQITSVIYFAIFLLL 358
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
4-350 |
1.40e-88 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 271.09 E-value: 1.40e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 4 LKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGASLF 83
Cdd:MTH00046 2 ISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 84 FICIYMHIARGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGGFSV 163
Cdd:MTH00046 82 FILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 164 DNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSNNPVGI-NSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSPNL 242
Cdd:MTH00046 162 TGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 243 LGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGvLALLFSILILMLVPilhtSKQRGITFRPLTQLLFWLLV 322
Cdd:MTH00046 242 VLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIV 316
|
330 340
....*....|....*....|....*...
gi 697870248 323 ADMLILTWIGGMPVEHPFIIIGQITSVI 350
Cdd:MTH00046 317 SLFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-199 |
4.01e-88 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 264.23 E-value: 4.01e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 2 PVLKIVNDALIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGAS 81
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 82 LFFICIYMHIARGLYYGSY--LYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWG 159
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 697870248 160 GFSVDNATLTRFFAFHFLFPFIIAAATILHLLFLHETGSN 199
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
11-197 |
3.65e-80 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 243.44 E-value: 3.65e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 11 LIDLPAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGASLFFICIYMH 90
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 91 IARGLYYG--SYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGGFSVDNATL 168
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 697870248 169 TRFFAFHFLFPFIIAAATILHLLFLHETG 197
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
200-346 |
1.49e-54 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 176.30 E-value: 1.49e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 200 NPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLALFSPNLLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRSIPN 279
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 697870248 280 KLGGVLALLFSILILMLVPILHTSKQRGiTFRPLTQLLFWLLVADMLILTWIGGMPVEHPFIIIGQI 346
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
251-351 |
1.63e-49 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 161.49 E-value: 1.63e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 251 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITFRPLTQLLFWLLVADMLILTW 330
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 697870248 331 IGGMPVEHPFIIIGQITSVIY 351
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
81-246 |
3.67e-43 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 147.77 E-value: 3.67e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 81 SLFFICIYMHIARGLYYGSYLYKE--TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIW 158
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 159 GGFSVDNATLTRFFAF-HFLFPFIIAAATILHLLFLHETGSNNPVGINSDADKIPFHPYFSYKDLLGFVFMLFGLASLAL 237
Cdd:pfam13631 81 GGPFPGTATIPRFYALhILLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 697870248 238 FSPNLLGDP 246
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
15-170 |
6.50e-33 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 122.51 E-value: 6.50e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 15 PAPANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGASLFFICIYMHIARG 94
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 697870248 95 LYYGSYLYKE--TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGGFSVDNATLTR 170
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTR 190
|
|
| petB |
CHL00070 |
cytochrome b6 |
17-201 |
7.98e-29 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 111.35 E-value: 7.98e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 17 PANISIWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVCHICRDVNYGWLIRNIHANGASLFFICIYMHIARGLY 96
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 97 YGSYLYKE--TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNDLVQWIWGGFSVDNATLTRFFAF 174
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 697870248 175 HFLFPFIIAAATIL-HLLFLHETGSNNP 201
Cdd:CHL00070 187 HTFVLPLLTAVFMLmHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
222-300 |
2.25e-11 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 61.73 E-value: 2.25e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 697870248 222 LLGFVFMLFGLASLalfSPNLLGDPdnfipANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPIL 300
Cdd:COG5679 45 ILGTIALCIGLAVL---DPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFI 115
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
235-318 |
2.64e-10 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 58.47 E-value: 2.64e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 235 LALFSPNLLGDPdnfipANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITF-RPL 313
Cdd:CHL00058 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFrRPV 128
|
....*
gi 697870248 314 TQLLF 318
Cdd:CHL00058 129 ATTVF 133
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
232-318 |
1.15e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.73 E-value: 1.15e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697870248 232 LASLALFSPNLLGDPdnfipANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMLVPILHTSKQRGITF- 310
Cdd:TIGR01156 51 VVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFr 125
|
....*...
gi 697870248 311 RPLTQLLF 318
Cdd:TIGR01156 126 RPVATTVF 133
|
|
| |
