|
Name |
Accession |
Description |
Interval |
E-value |
| SAWADEE |
pfam16719 |
SAWADEE domain; The SAWADEE domain, found in plant homeobox proteins, has a pair of tandem ... |
162-288 |
1.91e-65 |
|
SAWADEE domain; The SAWADEE domain, found in plant homeobox proteins, has a pair of tandem tudor-like folds that bind chromatin.
Pssm-ID: 465246 Cd Length: 126 Bit Score: 209.06 E-value: 1.91e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 162 MEFEAKSARDGAWYDVASFLSHRSVetadpevLVRFAGFGAEEDEWVNVRKHVRQRSLPCESSECVAVLPGDLILCFQEG 241
Cdd:pfam16719 3 LELEARSSKDGAWYDVRVFLQHRAL-------RVRFEGFGEEEDEWVNVRKRFRERSIPLEDSECRKVRVGDLVCCFQEG 75
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 697148403 242 KEQALYFDAHVLDAQRRRHD-VRGCRCRFLVRYDHD---QSEEIVPLRKVC 288
Cdd:pfam16719 76 GDDALYYDAVVVEIQRKRHDiVEGCRCTFVVRWDHGpraGTEEEVGLERIC 126
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
324-532 |
8.43e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.25 E-value: 8.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 324 PPAETTQKAQTESRIKPAEPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMTEKP------VAGT 397
Cdd:PHA03247 2780 PRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSlplggsVAPG 2859
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 398 TEVPDEAPEKSPVEAPAETA---GKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKP 474
Cdd:PHA03247 2860 GDVRRRPPSRSPAAKPAAPArppVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 697148403 475 PAPSTSNPDEAPEEPPAETTLEPPADSTskpaEEPEEPPAETSLKPPADSISKPAEAP 532
Cdd:PHA03247 2940 QPPLAPTTDPAGAGEPSGAVPQPWLGAL----VPGRVAVPRFRVPQPAPSREAPASST 2993
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
387-486 |
9.93e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.81 E-value: 9.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 387 EEMTEKPVAGTTEVP--------DEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTK 458
Cdd:PRK12270 12 EEMYQQYLADPNSVDpswreffaDYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAA 91
|
90 100
....*....|....*....|....*...
gi 697148403 459 PDEAAEQPPAEATLKPPAPSTSNPDEAP 486
Cdd:PRK12270 92 AAAAPAAPPAAAAAAAPAAAAVEDEVTP 119
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
324-536 |
1.64e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.48 E-value: 1.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 324 PPAETTQKAQTESRIKPAEPTqKQPAPEDTTKPVPNFAPmqlqkssTDSLTGNTLAETTPQCMEEMTEKPVAGTTEVPDE 403
Cdd:PHA03247 2735 LPAAPAPPAVPAGPATPGGPA-RPARPPTTAGPPAPAPP-------AAPAAGPPRRLTRPAVASLSESRESLPSPWDPAD 2806
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 404 APEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTL------------KPPAASTTKPDEAAEQPPAEAT 471
Cdd:PHA03247 2807 PPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLggsvapggdvrrRPPSRSPAAKPAAPARPPVRRL 2886
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 697148403 472 LKPPAP----STSNPDEAPEEPPAETTLEPPADSTSKPAEEPEEPPAETSLKPPADSISKPAEAPAEQP 536
Cdd:PHA03247 2887 ARPAVSrsteSFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEP 2955
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
324-501 |
1.75e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 51.14 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 324 PPAETTQKAQTESRIKPAEPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMtekPVAGTTEVPDE 403
Cdd:PRK07764 624 PAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAA---PAAPAGAAPAQ 700
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 404 APEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPAPSTSNPD 483
Cdd:PRK07764 701 PAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPS 780
|
170 180
....*....|....*....|....
gi 697148403 484 EAPE------EPPAETTLEPPADS 501
Cdd:PRK07764 781 EEEEmaeddaPSMDDEDRRDAEEV 804
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
324-550 |
2.88e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.71 E-value: 2.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 324 PPAETTQKAQTESRIKPAEPTQKQPAPEDTTKPVPnfaPMQLQKSSTDSLTGNTLAETTPQcmEEMTEKPVAGTTEVPDE 403
Cdd:PHA03247 2592 PPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDP---PPPSPSPAANEPDPHPPPTVPPP--ERPRDDPAPGRVSRPRR 2666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 404 APEKSPVEAPAETAgKSPAETTLEPPAASTSK------PDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPAP 477
Cdd:PHA03247 2667 ARRLGRAAQASSPP-QRPRRRAARPTVGSLTSladpppPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVP 2745
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 697148403 478 STSNPDEAPEEPPAETTLEPPADSTSKPAEEPEEPPAETslkPPADSISKPAEAPAEQPKEEEHVYAGATAAS 550
Cdd:PHA03247 2746 AGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT---RPAVASLSESRESLPSPWDPADPPAAVLAPA 2815
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
393-502 |
7.41e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.83 E-value: 7.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 393 PVAGTTEVPDEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATL 472
Cdd:PRK07764 392 GAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPA 471
|
90 100 110
....*....|....*....|....*....|
gi 697148403 473 KPPAPSTSNPDEAPEEPPAETTLEPPADST 502
Cdd:PRK07764 472 AAPEPTAAPAPAPPAAPAPAAAPAAPAAPA 501
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
393-500 |
8.87e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.83 E-value: 8.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 393 PVAGTTEVPDEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATL 472
Cdd:PRK07764 400 SAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAA 479
|
90 100
....*....|....*....|....*...
gi 697148403 473 KPPAPSTSNPDEAPEEPPAETTLEPPAD 500
Cdd:PRK07764 480 PAPAPPAAPAPAAAPAAPAAPAAPAGAD 507
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
393-552 |
1.11e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 48.31 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 393 PVAGTTEVPDEAPEKSPVeAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATL 472
Cdd:PRK07003 398 AVTAVTGAAGAALAPKAA-AAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGS 476
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 473 KPPAPSTSNPDEAPEepPAETTLEPPADSTSKPAEEPEEPPAETSLKPPADSISKPAEAPAEQPKEEEHVYAGATAASMD 552
Cdd:PRK07003 477 ASAPASDAPPDAAFE--PAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALD 554
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
378-549 |
1.12e-05 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 48.50 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 378 LAETTPQCMEEMTEKPVAGTTEVPDEAPEKSPVEAPAETAGKSPAETTLEPPA--ASTSKPDEAPEEPPTETTLKPPAAS 455
Cdd:PRK10811 847 VVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVvvAEPQPEEVVVVETTHPEVIAAPVTE 926
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 456 TTKPDEAAEQPPAEATLKPPAPSTSNPDEAPEEPPAETTLEPPADST---SKPAEEPEEPPAETSLKPPADSISKPAEAP 532
Cdd:PRK10811 927 QPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPevvAQPAAPVVAEVAAEVETVTAVEPEVAPAQV 1006
|
170
....*....|....*..
gi 697148403 533 AEQPKEEEHVYAGATAA 549
Cdd:PRK10811 1007 PEATVEHNHATAPMTRA 1023
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
340-504 |
1.91e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.54 E-value: 1.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 340 PAEPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMTEKPVAGTTEVPDEAPEKSPVEAPAETAGK 419
Cdd:PRK07003 373 PARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAK 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 420 SPAettlepPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPAPSTSNPDEAPEEPPAETTLEPPA 499
Cdd:PRK07003 453 ANA------RASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAA 526
|
....*
gi 697148403 500 DSTSK 504
Cdd:PRK07003 527 PPAPE 531
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
319-523 |
2.55e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.18 E-value: 2.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 319 TTKVYPPAETTQKAQTESRIKPAEPTQkqPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMTEKPVAGTT 398
Cdd:PRK12323 376 TAAAAPVAQPAPAAAAPAAAAPAPAAP--PAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 399 EVPDEAPEKSPveAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLkPPAASTTKPDEAAEQPPAEATLKPPAPS 478
Cdd:PRK12323 454 PAAAPAAAARP--AAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEEL-PPEFASPAPAQPDAAPAGWVAESIPDPA 530
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 697148403 479 TSNPD---EAPEEPPAETTLEPPADSTSKPAEEPEEPPAETSLKPPAD 523
Cdd:PRK12323 531 TADPDdafETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFD 578
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
392-545 |
3.27e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.63 E-value: 3.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 392 KPVAGTTEVPdEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTkpdeAAEQPPAEAt 471
Cdd:PRK14951 365 KPAAAAEAAA-PAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAP----AAAAPAAAP- 438
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 697148403 472 lkPPAPSTSNPDEAPEEPPAETTLEPPADSTSKPAEEPeeppaetslkPPADSISKPAEAPAEqPKEEEHVYAG 545
Cdd:PRK14951 439 --AAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVAS----------AAPAPAAAPAAARLT-PTEEGDVWHA 499
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
324-537 |
3.98e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.86 E-value: 3.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 324 PPAETTQKAQTESRIKPAEPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEmTEKPVAGTTEVPDe 403
Cdd:PHA03247 2626 PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARP-TVGSLTSLADPPP- 2703
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 404 aPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEAT-----LKPPAPS 478
Cdd:PHA03247 2704 -PPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAppaapAAGPPRR 2782
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 697148403 479 TSNPDEAPEEPPAETTLEPPADSTSKPAEEPEEPPAETSLKPPADSISKPAEAPAEQPK 537
Cdd:PHA03247 2783 LTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPP 2841
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
429-536 |
4.84e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.42 E-value: 4.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 429 PAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPAP-STSNPDEAPEEPPAETTLEPPADSTSkpae 507
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPaAAAAAAAAPAAPPAAAAAAAPAAAAV---- 113
|
90 100
....*....|....*....|....*....
gi 697148403 508 epeePPAETSLKPPADSISKPAEAPAEQP 536
Cdd:PRK12270 114 ----EDEVTPLRGAAAAVAKNMDASLEVP 138
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
331-550 |
7.49e-05 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 46.01 E-value: 7.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 331 KAQTESRIKPAEPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMTEKPVAGTTEVPDE------- 403
Cdd:PLN03237 1188 RGESGAAKKVSRQAPKKPAPKKTTKKASESETTEETYGSSAMETENVAEVVKPKGRAGAKKKAPAAAKEKEEEdeildlk 1267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 404 ----------APEKSP--------VEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLK----PPAASTTKpde 461
Cdd:PLN03237 1268 drlaaynldsAPAQSAkmeetvkaVPARRAAARKKPLASVSVISDSDDDDDDFAVEVSLAERLKKkggrKPAAANKK--- 1344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 462 aAEQPPAEATLKPPAPSTSNPDEAPEE-PPAETTLEPPADSTSKPAEEPEEPPAETSLKPPADSISKPAEAPAEQPKEEE 540
Cdd:PLN03237 1345 -AAKPPAAAKKRGPATVQSGQKLLTEMlKPAEAIGISPEKKVRKMRASPFNKKSGSVLGRAATNKETESSENVSGSSSSE 1423
|
250
....*....|
gi 697148403 541 HVYAGATAAS 550
Cdd:PLN03237 1424 KDEIDVSAKP 1433
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
340-532 |
7.55e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.64 E-value: 7.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 340 PAEPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMTEKPVAGTTEVPDEAPEKSPVEAPAETAGK 419
Cdd:PRK12323 377 AAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAA 456
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 420 SPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAeatlkPPAPSTSNPDEAPEEPPAETTLEpPA 499
Cdd:PRK12323 457 APAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPE-----FASPAPAQPDAAPAGWVAESIPD-PA 530
|
170 180 190
....*....|....*....|....*....|...
gi 697148403 500 DSTSKPAEEPEEPPAETSLKPPADSISKPAEAP 532
Cdd:PRK12323 531 TADPDDAFETLAPAPAAAPAPRAAAATEPVVAP 563
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
379-497 |
7.75e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.48 E-value: 7.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 379 AETTPQCMEEMTEKPVAGTTEVPDEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTK 458
Cdd:PRK14951 369 AAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALA 448
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 697148403 459 PDEAAEQPPAEATLKP---PAPSTSNPDEAPEEPPAETTLEP 497
Cdd:PRK14951 449 PAPPAQAAPETVAIPVrvaPEPAVASAAPAPAAAPAAARLTP 490
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
352-539 |
8.97e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.25 E-value: 8.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 352 DTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMTEKPVAGTTEVPDEAPEKSPV---EAPAETAGKSPAETTLEP 428
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPApeaLAAARQASARGPGGAPAP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 429 PAASTSKPdeAPEEPPtettlkPPAASTTKPDEAAEQPPAEATLKPPAPStsnPDEAP--EEPPAETTLEPPADSTSKPA 506
Cdd:PRK12323 451 APAPAAAP--AAAARP------AAAGPRPVAAAAAAAPARAAPAAAPAPA---DDDPPpwEELPPEFASPAPAQPDAAPA 519
|
170 180 190
....*....|....*....|....*....|...
gi 697148403 507 EEPEEPPAETSLKPPADSISKPAEAPAEQPKEE 539
Cdd:PRK12323 520 GWVAESIPDPATADPDDAFETLAPAPAAAPAPR 552
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
340-536 |
1.11e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 340 PAEPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPqcmeemtEKPVAGTTEVPDEAPEkSPVEAPAETAGK 419
Cdd:PHA03247 2702 PPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVP-------AGPATPGGPARPARPP-TTAGPPAPAPPA 2773
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 420 SPAEttlePPAASTSKPDEAPEEPPTETTLKPPAASttkpDEAAEQPPAEATLK-----------PPAPSTSNPDEAPEE 488
Cdd:PHA03247 2774 APAA----GPPRRLTRPAVASLSESRESLPSPWDPA----DPPAAVLAPAAALPpaaspagplppPTSAQPTAPPPPPGP 2845
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 697148403 489 PPAETTLE----PPADSTSKPAEEPEEPPAETSLKPPADSISKPAEAPAEQP 536
Cdd:PHA03247 2846 PPPSLPLGgsvaPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTES 2897
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
316-485 |
1.15e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 44.97 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 316 RGNTTKVYPPAEttqKAQTESRIKPAEPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMTEkpva 395
Cdd:PRK13108 286 RGSEYVVDEALE---REPAELAAAAVASAASAVGPVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGE---- 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 396 gTTEVPDEAPEKSPV-EAPAETAGKSPAETTLEPPAAStSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKP 474
Cdd:PRK13108 359 -STPAVEETSEADIErEQPGDLAGQAPAAHQVDAEAAS-AAPEEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAG 436
|
170
....*....|.
gi 697148403 475 PAPSTSNPDEA 485
Cdd:PRK13108 437 PGDDPAEPDGI 447
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
393-540 |
1.18e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 393 PVAGTTEVPDEAPEKSPVEAPAETAGKSPAETTLEP-PAASTSKPDEAPEEPPTETTlkPPAASTTKPDEAAEQPPAEAT 471
Cdd:PRK07003 375 RVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALaPKAAAAAAATRAEAPPAAPA--PPATADRGDDAADGDAPVPAK 452
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 697148403 472 LKPPAPSTSNPDEAPEEPPAETTLEPPADSTSKPAEEPEEPPAETSLKPPADSISKPAEAPAEQPKEEE 540
Cdd:PRK07003 453 ANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDA 521
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
341-556 |
1.33e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.16 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 341 AEPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCmeemtekpvagTTEVPDEAPEKSPVEAPAETAGKS 420
Cdd:PHA03307 18 GEFFPRPPATPGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAAC-----------DRFEPPTGPPPGPGTEAPANESRS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 421 PAETTLEPPAASTSKPDEAPEEPPTETTLKPPAAST------TKPDEAAEQPPAEATLKPPAPSTSNPDEAPEEPPAETT 494
Cdd:PHA03307 87 TPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPpaspppSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDA 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 697148403 495 LEPPADSTSKPAEEPEEPPAETSLKPPADSISKPAEAPAEQPKEEEHVYAGATAASMDHDNA 556
Cdd:PHA03307 167 ASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSA 228
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
379-535 |
1.40e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.86 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 379 AETTPQCMEEMTEKPVAGTTEVPDEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETtlKPPAASTTK 458
Cdd:PRK07994 373 QSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKS--EPAAASRAR 450
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 697148403 459 PDEAAEQPPAEatlKPPAPSTSNPDEAPEEPPAETTLEPPADSTSKPAEEPEEPPAETSLKPPaDSISKPAEAPAEQ 535
Cdd:PRK07994 451 PVNSALERLAS---VRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTP-ELAAKLAAEAIER 523
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
413-556 |
1.44e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.86 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 413 PAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEAT-----LKPPAPSTSNPDEAPE 487
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTsqllaARQQLQRAQGATKAKK 440
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 697148403 488 EPPAETTLEPPADSTSKPAEEPEEPPAETSLKPPADSISKPAEAPAEQPKEEEHVYAGATAASMDHDNA 556
Cdd:PRK07994 441 SEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKT 509
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
340-537 |
1.61e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 44.53 E-value: 1.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 340 PAEPTQKQPAPedttKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMTEKPVAGTTEVPDEAPEKSPVEAPaetagK 419
Cdd:PLN03209 388 PTPPSSSPASS----KSVDAVAKPAEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTA-----P 458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 420 SPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATlkPPAPSTSNPDEAPEEPPAETTLEPPA 499
Cdd:PLN03209 459 TGVSPSVSSTSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPT--SPSPAAPVGKVAPSSTNEVVKVGNSA 536
|
170 180 190
....*....|....*....|....*....|....*....
gi 697148403 500 DSTSKPAEEPEEPPAETSLKP-PADSISKPAEAPAEQPK 537
Cdd:PLN03209 537 PPTALADEQHHAQPKPRPLSPyTMYEDLKPPTSPTPSPV 575
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
392-549 |
3.55e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.32 E-value: 3.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 392 KPVAGTTEVPDEAPEKSPVE-APAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEA 470
Cdd:PRK07994 362 AAPLPEPEVPPQSAAPAASAqATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKS 441
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 697148403 471 tlKPPAPSTSNPDEAPEEPPAETtlePPADSTSKPAEEPEEPPAETSlKPPADSISKPAEAPAEQPKEEEHVYAGATAA 549
Cdd:PRK07994 442 --EPAAASRARPVNSALERLASV---RPAPSALEKAPAKKEAYRWKA-TNPVEVKKEPVATPKALKKALEHEKTPELAA 514
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
423-491 |
3.74e-04 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 43.45 E-value: 3.74e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 697148403 423 ETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPAPSTSNPDEAPEEPPA 491
Cdd:COG5373 34 EAELAEAAEAASAPAEPEPEAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPA 102
|
|
| PRK06347 |
PRK06347 |
1,4-beta-N-acetylmuramoylhydrolase; |
367-493 |
4.37e-04 |
|
1,4-beta-N-acetylmuramoylhydrolase;
Pssm-ID: 180536 [Multi-domain] Cd Length: 592 Bit Score: 43.14 E-value: 4.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 367 KSSTDSLTGNTLAETTPQCmeemTEKPVAGTtEVPDEAPEKSPVEAP---AETAGKSPAETTLEPPaaSTSKPDEAPEEP 443
Cdd:PRK06347 20 KKSKKFKTGATIAGVTAIA----TSITVPGI-EVIVSADETAPADEAsksAEANTTKEAPATATPE--NTTEPTVEPKQT 92
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 697148403 444 PTETTLKPPAASttkpdeaaeQPPAEATLKPPA-PST-SNPDEAPEEPPAET 493
Cdd:PRK06347 93 ETKEQTKTPEEK---------QPAAKQVEKAPAePATvSNPDNATSSSTPAT 135
|
|
| PTZ00441 |
PTZ00441 |
sporozoite surface protein 2 (SSP2); Provisional |
399-504 |
4.94e-04 |
|
sporozoite surface protein 2 (SSP2); Provisional
Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 43.03 E-value: 4.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 399 EVPDEAPEKSPveAPAETAGKSPAETTLEPPAastskPDEAPEEPPT-ETTLKPPAASTTKPDEAAEQP-----PAEATL 472
Cdd:PTZ00441 321 DVPDNPQDPVP--PPNEGKDGNPNEENLFPPG-----DDEVPDESNVpPNPPNVPGGSNSEFSSDVENPpnppnPDIPEQ 393
|
90 100 110
....*....|....*....|....*....|....*..
gi 697148403 473 KPPAPSTSNPD---EAPEEP--PAETTLEPPADSTSK 504
Cdd:PTZ00441 394 EPNIPEDSNKEvpeDVPMEPedDRDNNFNEPKKPENK 430
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
317-532 |
5.92e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 5.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 317 GNTTKVYPPAETTQKAQTESRIKPAEPTQKQPAPedttkPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMTEKPVAG 396
Cdd:PHA03247 2753 GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRP-----AVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGP 2827
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 397 ----TTEVPDEAPEKSPVEAPAETAGKSPA---ETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPdeaAEQPPAE 469
Cdd:PHA03247 2828 lpppTSAQPTAPPPPPGPPPPSLPLGGSVApggDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTES---FALPPDQ 2904
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 697148403 470 ATLKPPAPSTSNPDEAPEEPPAETTLEPPadstsKPAEEPEEPPAETSLKPPADSISKPAEAP 532
Cdd:PHA03247 2905 PERPPQPQAPPPPQPQPQPPPPPQPQPPP-----PPPPRPQPPLAPTTDPAGAGEPSGAVPQP 2962
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
393-487 |
6.31e-04 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 42.36 E-value: 6.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 393 PVAGT-TEVPDEAPEKSPVEAP---AETAGKSPAETTLEPPAASTSKPDEAPEEPPTETtlKPPAASTTKPDEAAEQPPA 468
Cdd:PTZ00144 93 PASGViTKIFAEEGDTVEVGAPlseIDTGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPT--PEPPAASKPTPPAAAKPPE 170
|
90
....*....|....*....
gi 697148403 469 EATLKPPAPSTSNPDEAPE 487
Cdd:PTZ00144 171 PAPAAKPPPTPVARADPRE 189
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
305-487 |
8.67e-04 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 42.08 E-value: 8.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 305 LKQQKIGNDITRGNTTKVYPPAETTQKAQTESRIKPAEpTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPq 384
Cdd:pfam13254 185 IRQSRASVDLGRPNSFKEVTPVGLMRSPAPGGHSKSPS-VSGISADSSPTKEEPSEEADTLSTDKEQSPAPTSASEPPP- 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 385 cmEEMTEKPVAGTTEVPDEAPEKSPVEAPAETAGKSPAETTLEPPAAStskpdeapEEPPTETTLKPPAASTTKPD--EA 462
Cdd:pfam13254 263 --KTKELPKDSEEPAAPSKSAEASTEKKEPDTESSPETSSEKSAPSLL--------SPVSKASIDKPLSSPDRDPLspKP 332
|
170 180
....*....|....*....|....*....
gi 697148403 463 AEQPPAE---ATLKP-PAPSTSNPDEAPE 487
Cdd:pfam13254 333 KPQSPPKdfrANLRSrEVPKDKSKKDEPE 361
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
389-463 |
1.13e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 41.42 E-value: 1.13e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 697148403 389 MTEKPVAGTTEVPDEAPEKSPVEAPAETAGKSPAETTLEPPaASTSKPDEAPEEPPTETTLKPPAASTTKPDEAA 463
Cdd:TIGR00601 73 MVSKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAP-ASAVEEKSPSEESATATAPESPSTSVPSSGSDA 146
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
404-484 |
1.43e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 41.49 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 404 APEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPaPSTSNPD 483
Cdd:PRK14948 517 ASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSP-TKDSSPE 595
|
.
gi 697148403 484 E 484
Cdd:PRK14948 596 E 596
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
317-556 |
1.44e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.51 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 317 GNTTKVYPPAETTQKAQTESRIKPAEPTQkQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQcmeemtekpvag 396
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPPEEAARPAA-PAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPK------------ 655
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 397 ttEVPDEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTettlkpPAASTTKPDEAAEQPPAEATLKPPA 476
Cdd:PRK07764 656 --HVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPA------PAPAATPPAGQADDPAAQPPQAAQG 727
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 477 PSTSNPDEAPEEPPAETTLEPPADSTSKPAEEPEEPPaetslkPPADSISKPAEAPAEQPKEEEHVYAGATAASMDHDNA 556
Cdd:PRK07764 728 ASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAP------APAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDA 801
|
|
| PRK06347 |
PRK06347 |
1,4-beta-N-acetylmuramoylhydrolase; |
429-549 |
1.59e-03 |
|
1,4-beta-N-acetylmuramoylhydrolase;
Pssm-ID: 180536 [Multi-domain] Cd Length: 592 Bit Score: 41.22 E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 429 PAASTSKPDEAPEEPPTETTLKPPaaSTTKPDEAAEQPPAEATLKPPAPSTSnPDEAPEEPPAET-TLEPPADSTSKPAE 507
Cdd:PRK06347 57 PADEASKSAEANTTKEAPATATPE--NTTEPTVEPKQTETKEQTKTPEEKQP-AAKQVEKAPAEPaTVSNPDNATSSSTP 133
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 697148403 508 EPEEPPAETSLKPPA--DSISKPAEAPAEQPKEEEHVYAGATAA 549
Cdd:PRK06347 134 ATYNLLQKSALRSGAtvQSFIQTIQASSSQIAAENDLYASVMIA 177
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
324-540 |
1.69e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.46 E-value: 1.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 324 PPAETTQKAQTESRIKPAEPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQcmeeMTEKPVAGTtevPDE 403
Cdd:PHA03247 2701 PPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPP----TTAGPPAPA---PPA 2773
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 404 APEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPAPSTSNPD 483
Cdd:PHA03247 2774 APAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLG 2853
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 697148403 484 -----------EAPEEPPA---ETTLEPPADSTSKPAEEPEEPPAETSLKPPADSISKPAEAPAEQPKEEE 540
Cdd:PHA03247 2854 gsvapggdvrrRPPSRSPAakpAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPP 2924
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
324-489 |
1.80e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.01 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 324 PPAETTQKAQTESRIKPA--------EPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMTEKPVA 395
Cdd:PRK12323 412 AAAAARAVAAAPARRSPApealaaarQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAP 491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 396 GTTEVP--DEAPEKSPVEAPAETAGKSP---AETTLEPPAASTSKPDEAPEEPPTETTLkPPAASTTKPDEAAEQPPAEA 470
Cdd:PRK12323 492 ADDDPPpwEELPPEFASPAPAQPDAAPAgwvAESIPDPATADPDDAFETLAPAPAAAPA-PRAAAATEPVVAPRPPRASA 570
|
170
....*....|....*....
gi 697148403 471 TLKPPAPSTSNPDEAPEEP 489
Cdd:PRK12323 571 SGLPDMFDGDWPALAARLP 589
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
369-458 |
1.83e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.41 E-value: 1.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 369 STDSLTGNTLAETTPQCMEEMTEKPVAGTTEVPDEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETT 448
Cdd:PRK12270 40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTP 119
|
90
....*....|
gi 697148403 449 LKPPAASTTK 458
Cdd:PRK12270 120 LRGAAAAVAK 129
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
400-492 |
1.87e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 40.71 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 400 VPDEAPEKSPVEAPAETAGKSPAETTLEPpaaSTSKPDEAPEEPPTETTlkPPAASTTKPDEAAEQPPAEATLKPPAPST 479
Cdd:PHA03291 190 LPLSAPRLGPADVFVPATPRPTPRTTASP---ETTPTPSTTTSPPSTTI--PAPSTTIAAPQAGTTPEAEGTPAPPTPGG 264
|
90
....*....|...
gi 697148403 480 SNPDEAPEEPPAE 492
Cdd:PHA03291 265 GEAPPANATPAPE 277
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
321-541 |
1.90e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.46 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 321 KVYPPAETTQKAQTEsriKPAEPTQ--KQPAPEDTTKPVPNFA----PMQLQKSSTDSLTGNTLAETTPQCMEEMTEKPV 394
Cdd:PHA03247 2660 RVSRPRRARRLGRAA---QASSPPQrpRRRAARPTVGSLTSLAdpppPPPTPEPAPHALVSATPLPPGPAAARQASPALP 2736
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 395 AgttevpDEAPEKSPvEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKP 474
Cdd:PHA03247 2737 A------APAPPAVP-AGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPA 2809
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 697148403 475 PAPStSNPDEAPEEPPAetTLEPPADSTSKPAEEPEEPPAETSLKP-----PADSISK--PAEAPAEQPKEEEH 541
Cdd:PHA03247 2810 AVLA-PAAALPPAASPA--GPLPPPTSAQPTAPPPPPGPPPPSLPLggsvaPGGDVRRrpPSRSPAAKPAAPAR 2880
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
394-474 |
1.92e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 41.08 E-value: 1.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 394 VAGTTEVPDEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETtlkPPAASTTKPdeAAEQPPAEATLK 473
Cdd:PRK14954 384 PAGSPDVKKKAPEPDLPQPDRHPGPAKPEAPGARPAELPSPASAPTPEQQPPVA---RSAPLPPSP--QASAPRNVASGK 458
|
.
gi 697148403 474 P 474
Cdd:PRK14954 459 P 459
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
321-491 |
2.27e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 40.42 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 321 KVYPPAETTqkAQTESriKPAEPTQKQPAPEDTTKPVPNfaPMQLQKSstdslTGNTLAETTPQCMEEMTEKPVAG--TT 398
Cdd:pfam05539 166 KEPKTAVTT--SKTTS--WPTEVSHPTYPSQVTPQSQPA--TQGHQTA-----TANQRLSSTEPVGTQGTTTSSNPepQT 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 399 EVP--DEAPEKSPVEAPAETagkSPAETTleppAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPA 476
Cdd:pfam05539 235 EPPpsQRGPSGSPQHPPSTT---SQDQST----TGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPTPRPTA 307
|
170
....*....|....*
gi 697148403 477 PSTSNPDEAPEEPPA 491
Cdd:pfam05539 308 TTQSGSSPPHSSPPG 322
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
360-556 |
2.37e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 40.85 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 360 FAPMQLQKSSTDSLTGNTLAETtPQCMEEMTEKPVAGTTEVPDEAPEKSPVEAPAEtAGKSPAETTLEPPA--ASTSKPD 437
Cdd:PRK08691 358 FAPLAAASCDANAVIENTELQS-PSAQTAEKETAAKKPQPRPEAETAQTPVQTASA-AAMPSEGKTAGPVSnqENNDVPP 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 438 EAPEEPPTET---TLKPPAASTTKPDEAAEQPPAEATLKPPAPSTSNP--DEAPEEPPAETTLEPPADSTSKPAEEPEEP 512
Cdd:PRK08691 436 WEDAPDEAQTaagTAQTSAKSIQTASEAETPPENQVSKNKAADNETDAplSEVPSENPIQATPNDEAVETETFAHEAPAE 515
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 697148403 513 PAETSLKPPADSiskPAEAPAEQPKEE-EHVYAGATAASMDHDNA 556
Cdd:PRK08691 516 PFYGYGFPDNDC---PPEDGAEIPPPDwEHAAPADTAGGGADEEA 557
|
|
| HOX |
smart00389 |
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
13-75 |
2.41e-03 |
|
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes
Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 36.46 E-value: 2.41e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 697148403 13 RFNATEVAEMEAILQAHNatMPAREVLVALAEKfsssaersgkIMVQMKQVWNWFQNRRYAIR 75
Cdd:smart00389 7 SFTPEQLEELEKEFQKNP--YPSREEREELAKK----------LGLSERQVKVWFQNRRAKWK 57
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
432-498 |
2.72e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 2.72e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 697148403 432 STSKPDEAPEEPPTEttlKPPAASTTKPDEAAEQPPAEatlKPPAPSTSNPDEAPEEPPAETTLEPP 498
Cdd:PTZ00144 116 SEIDTGGAPPAAAPA---AAAAAKAEKTTPEKPKAAAP---TPEPPAASKPTPPAAAKPPEPAPAAK 176
|
|
| SAP130_C |
pfam16014 |
Histone deacetylase complex subunit SAP130 C-terminus; |
393-542 |
2.75e-03 |
|
Histone deacetylase complex subunit SAP130 C-terminus;
Pssm-ID: 464973 [Multi-domain] Cd Length: 371 Bit Score: 40.30 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 393 PVAGTTE-VPDEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEAT 471
Cdd:pfam16014 33 PVTVAVEaLPGQNSEQQTASASPPSQHPAQAIPTILAPAAPPSQPSVVLSTLPAAMAVTPPIPASMANVVAPPTQPAASS 112
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 697148403 472 LKPPAPSTSNPDE--APEEPPAETTLEPPADSTSKPAEEPEEPPAETSLkPPADSIskPAEAPAEQPKEEEHV 542
Cdd:pfam16014 113 TAACAVSSVLPEIkiKQEAEPMDTSQSVPPLTPTSISPALTSLANNLSV-PAGDLL--PGASPRKKPRKQQHV 182
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
393-557 |
2.86e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 40.63 E-value: 2.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 393 PVAGTTEVPDEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPD-EAPEEPPTETTLKPPAASTTKPDEAAEQPPAEAT 471
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVaAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 472 LKPPAPSTSNPDEAPEEPPAETTLEPP-ADSTSKPAEEPEEPpaetslkPPADSIskPAEAPAEQPKEEEHVYAGATAAS 550
Cdd:PRK12323 455 AAAPAAAARPAAAGPRPVAAAAAAAPArAAPAAAPAPADDDP-------PPWEEL--PPEFASPAPAQPDAAPAGWVAES 525
|
....*..
gi 697148403 551 MDHDNAS 557
Cdd:PRK12323 526 IPDPATA 532
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
439-531 |
2.94e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.56 E-value: 2.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 439 APEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPAPSTSNPDEAPEEPPAETTLEPPADSTSKPAEEPEEPPAETSL 518
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDE 440
|
90
....*....|...
gi 697148403 519 KPPADSISKPAEA 531
Cdd:PRK14950 441 KPKYTPPAPPKEE 453
|
|
| motB |
PRK05996 |
MotB family protein; |
399-492 |
2.98e-03 |
|
MotB family protein;
Pssm-ID: 235665 [Multi-domain] Cd Length: 423 Bit Score: 40.07 E-value: 2.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 399 EVPDEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPAPS 478
Cdd:PRK05996 191 EVTTAGDLLPPGQAREQAQGAKSATAAPATVPQAAPLPQAQPKKAATEEELIADAKKAATGEPAANAAKAAKPEPMPDDQ 270
|
90
....*....|....
gi 697148403 479 TSNPDEAPEEPPAE 492
Cdd:PRK05996 271 QKEAEQLQAAIAQA 284
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
332-498 |
3.05e-03 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 39.84 E-value: 3.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 332 AQTESRIKPAEPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMT-EKPVAGTTEVPDEAPEkSPV 410
Cdd:PHA02682 19 ADTSSSLFTKCPQATIPAPAAPCPPDADVDPLDKYSVKEAGRYYQSRLKANSACMQRPSgQSPLAPSPACAAPAPA-CPA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 411 EAPAetagkspaettlePPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPAPSTSNPDEAPEEPP 490
Cdd:PHA02682 98 CAPA-------------APAPAVTCPAPAPACPPATAPTCPPPAVCPAPARPAPACPPSTRQCPPAPPLPTPKPAPAAKP 164
|
170
....*....|
gi 697148403 491 A--ETTLEPP 498
Cdd:PHA02682 165 IflHNQLPPP 174
|
|
| PRK10927 |
PRK10927 |
cell division protein FtsN; |
384-504 |
4.05e-03 |
|
cell division protein FtsN;
Pssm-ID: 236797 [Multi-domain] Cd Length: 319 Bit Score: 39.66 E-value: 4.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 384 QCMEEMTEKPVAgTTEVP--DEAPEKSPVEAPAETAGKSPAETTlepPAASTSKPDEAPEEPPTETTLKPPA-ASTTKPD 460
Cdd:PRK10927 124 QMQADMRQQPTQ-LVEVPwnEQTPEQRQQTLQRQRQAQQLAEQQ---RLAQQSRTTEQSWQQQTRTSQAAPVqAQPRQSK 199
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 697148403 461 EAAEQPPAEATLKPPAPSTSNPdEAPEEPPAETTLEPPADSTSK 504
Cdd:PRK10927 200 PASTQQPYQDLLQTPAHTTAQS-KPQQAAPVTRAADAPKPTAEK 242
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
390-491 |
4.38e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 40.26 E-value: 4.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 390 TEKPVAGTTEVPDEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPdEAAEQPPAE 469
Cdd:PRK12270 39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAP-AAAAVEDEV 117
|
90 100
....*....|....*....|...
gi 697148403 470 ATLKPPAPST-SNPDEAPEEPPA 491
Cdd:PRK12270 118 TPLRGAAAAVaKNMDASLEVPTA 140
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
437-552 |
4.57e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 39.87 E-value: 4.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 437 DEAPEEPPtettlkPPAASTTKPDEAAEQPPAEATLKPPAPSTSNPDEAPEEPPAETTLEPPADSTSKPAEEPEeppaeT 516
Cdd:PRK12270 35 DYGPGSTA------APTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAA-----A 103
|
90 100 110
....*....|....*....|....*....|....*.
gi 697148403 517 SLKPPADSISKPAEAPAEQPkeeehvyAGATAASMD 552
Cdd:PRK12270 104 AAAAPAAAAVEDEVTPLRGA-------AAAVAKNMD 132
|
|
| Gag_spuma |
pfam03276 |
Spumavirus gag protein; |
412-536 |
4.64e-03 |
|
Spumavirus gag protein;
Pssm-ID: 460872 [Multi-domain] Cd Length: 614 Bit Score: 39.73 E-value: 4.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 412 APAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEaaeQPPAEATLKPPAPSTSNPD-----EAP 486
Cdd:pfam03276 179 SPGAQGGIPPGASFSGLPSLPAIGGIHLPAIPGIHARAPPGNIARSLGDD---IMPSLGDAGMPQPRFAFHPgnpfaEAE 255
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 697148403 487 EEPPAETTLEPPADSTSKPAEEPEEPPAETSLKPPADSISKPAEAPAEQP 536
Cdd:pfam03276 256 GHPFAEAEGERPRDIPRAPRIDAPSAPAIPAIQPIAPPMIPPIGAPIPIP 305
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
435-534 |
4.81e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 39.85 E-value: 4.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 435 KPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPAPSTSNPDEAPEEPPAETTLEPPADSTSKPAEEPEEPPA 514
Cdd:PRK07994 360 HPAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAK 439
|
90 100
....*....|....*....|
gi 697148403 515 ETslKPPADSISKPAEAPAE 534
Cdd:PRK07994 440 KS--EPAAASRARPVNSALE 457
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
323-533 |
4.86e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.07 E-value: 4.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 323 YPPAETTQKAQTESRikpaEPTQKQPAPEDTTKPVPNFAPMQLQKSSTDSLTGNTLAETTPQCMEEMTEKPVAGTTEVPD 402
Cdd:PRK10263 380 YPQQSQYAQPAVQYN----EPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQST 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 403 EAPEksPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETT--LKPPAASTTKPDE--AAEQPPAEATLKP-PAP 477
Cdd:PRK10263 456 FAPQ--STYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETkpARPPLYYFEEVEEkrAREREQLAAWYQPiPEP 533
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 697148403 478 STSNPDEAPEEPPAETTLEPPADSTSKPAEEPEEPPAETSLKPPADSISKPAEAPA 533
Cdd:PRK10263 534 VKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLA 589
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
339-528 |
5.50e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 39.92 E-value: 5.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 339 KPAE---PTQKQPAPEDTTKPVPN-FAPMQLQKSSTDSLTGNTLAETTPQCM-------EEMTEKPVAGTTevPDEAPEK 407
Cdd:PHA03247 2482 RPAEarfPFAAGAAPDPGGGGPPDpDAPPAPSRLAPAILPDEPVGEPVHPRMltwirglEELASDDAGDPP--PPLPPAA 2559
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 408 SPVEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPAPSTSNPDEAPE 487
Cdd:PHA03247 2560 PPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPD 2639
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 697148403 488 EPPAETTLEPPADSTSKPAEEPEEPPAETSLKPPADSISKP 528
Cdd:PHA03247 2640 PHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPP 2680
|
|
| homeodomain |
cd00086 |
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
13-75 |
5.60e-03 |
|
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Pssm-ID: 238039 [Multi-domain] Cd Length: 59 Bit Score: 35.30 E-value: 5.60e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 697148403 13 RFNATEVAEMEAILQAHNatMPAREVLVALAEKfsssaersgkIMVQMKQVWNWFQNRRYAIR 75
Cdd:cd00086 6 RFTPEQLEELEKEFEKNP--YPSREEREELAKE----------LGLTERQVKIWFQNRRAKLK 56
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
423-549 |
5.62e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 39.41 E-value: 5.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 423 ETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPDEAAEQPPAEATLKPPAPSTSNPDEAP-----EEPPAETTLEP 497
Cdd:PRK14950 357 EALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPvphtpESAPKLTRAAI 436
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 697148403 498 PADSTSKPAEEPEEPPAETSLKPPADSISKpAEAPAEQPKEEEHVYAGATAA 549
Cdd:PRK14950 437 PVDEKPKYTPPAPPKEEEKALIADGDVLEQ-LEAIWKQILRDVPPRSPAVQA 487
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
319-501 |
6.09e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 39.54 E-value: 6.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 319 TTKVYPPAETTQKAQTESRIKPAEPTQKQPAPEDTTKPVPNFAPMQ--------LQKSSTDSLTGNTLAETTPQCMEEMT 390
Cdd:PHA03247 2808 PAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGgsvapggdVRRRPPSRSPAAKPAAPARPPVRRLA 2887
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 391 EKPVAGTTEvPDEAPEKSPVEAPAETAGKSPAETTLEPPAASTSKPDEAP--EEPPTETTLKPPAASTTKPDEAAEQPPA 468
Cdd:PHA03247 2888 RPAVSRSTE-SFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPprPQPPLAPTTDPAGAGEPSGAVPQPWLGA 2966
|
170 180 190
....*....|....*....|....*....|...
gi 697148403 469 EATLKPPAPSTSNPDEAPEEPPAETTLEPPADS 501
Cdd:PHA03247 2967 LVPGRVAVPRFRVPQPAPSREAPASSTPPLTGH 2999
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
410-549 |
6.45e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.58 E-value: 6.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 410 VEAPAETAGKSPAETTLEPPAASTSKPDEAPEEPPtettLKPPAASTTKPDEAAEQPPAEATLKPPAPSTSNPDEAPEEP 489
Cdd:PRK07764 378 LERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAP----AAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGA 453
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 490 PAettlEPPADSTSKPAEEPEEPPAETSLKPPADSISKPAEAPAEQPKEEEHVYAGATAA 549
Cdd:PRK07764 454 PS----PPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDA 509
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
330-501 |
7.55e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 39.31 E-value: 7.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 330 QKAQTESRIKPAEPTQKQPAPEDTTKPvpnfAPMQLQKSSTDSLTGNTLAETTPQcmEEMTEKPVAgttEVPDEAPEKSP 409
Cdd:PRK08691 378 QSPSAQTAEKETAAKKPQPRPEAETAQ----TPVQTASAAAMPSEGKTAGPVSNQ--ENNDVPPWE---DAPDEAQTAAG 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 410 VeAPAETAGKSPAETTLEPPAASTSKPDEAPEE--PPTETTLKPPAASTTKPDEAAE-QPPAEATLKPPAPSTSNPD--- 483
Cdd:PRK08691 449 T-AQTSAKSIQTASEAETPPENQVSKNKAADNEtdAPLSEVPSENPIQATPNDEAVEtETFAHEAPAEPFYGYGFPDndc 527
|
170 180
....*....|....*....|.
gi 697148403 484 ---EAPEEPPAETTLEPPADS 501
Cdd:PRK08691 528 ppeDGAEIPPPDWEHAAPADT 548
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
388-543 |
8.17e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 38.99 E-value: 8.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 388 EMTEKPVAGTTEVPDEAPEKSPVEAPAetagkSPAETTLEPPAASTSKPDEAPEEPPTETTLKPPAASTTKPdeAAEQPP 467
Cdd:PRK14971 353 ELTLIQLAQLTQKGDDASGGRGPKQHI-----KPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQ--PAGTPP 425
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 697148403 468 AeATLKPPAPSTSNPdeapeeppaETTLEPPADSTSKPAEEPEEPPAETSLKPpadSISKPAEAPAEQPKEEEHVY 543
Cdd:PRK14971 426 T-VSVDPPAAVPVNP---------PSTAPQAVRPAQFKEEKKIPVSKVSSLGP---STLRPIQEKAEQATGNIKEA 488
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
420-556 |
9.45e-03 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 38.94 E-value: 9.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697148403 420 SPAETTLEPPAASTSKPDEAPEepptettlkPPAASTTKPDEAAeqPPAEATLKPPAPSTSNPDEAPEEPpaettlEPPA 499
Cdd:PHA03269 24 TNIPIPELHTSAATQKPDPAPA---------PHQAASRAPDPAV--APTSAASRKPDLAQAPTPAASEKF------DPAP 86
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 697148403 500 DSTSKPAEEPEEPPAETSLKPPAdsiSKPAEAPAEQP-KEEEHVYAGATAASMDHDNA 556
Cdd:PHA03269 87 APHQAASRAPDPAVAPQLAAAPK---PDAAEAFTSAAqAHEAPADAGTSAASKKPDPA 141
|
|
|