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Conserved domains on  [gi|697096319|ref|XP_009615825|]
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BEL1-like homeodomain protein 1 [Nicotiana tomentosiformis]

Protein Classification

BEL1-like homeodomain protein( domain architecture ID 11167014)

BEL1-like homeodomain protein is a plant-specific transcription factor involved in the transcriptional regulation of key developmental processes similar to Arabidopsis thaliana BEL1 which is involved in ovule development; is a DNA-binding protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
POX pfam07526
Associated with HOX; The function of this domain is unknown. It is often found in plant ...
 315-453 1.01e-48

Associated with HOX; The function of this domain is unknown. It is often found in plant proteins associated with pfam00046.


:

Pssm-ID: 429514  Cd Length: 139  Bit Score: 167.83  E-value: 1.01e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697096319  315 ILKSSKFLRPAQQLMDELCNLAAGSNAVKSCIFSKKVREGGVRVSCDGNAAESSSGAIVGDSGGSSAESNGRPDYLQKKA 394
Cdd:pfam07526   1 VLLRSRYLKPAQELLDEVVSVGGKSIASKSSSSSVSKKEDSEDGGSSQSGGGEGGGGSSSGGGSPSLSSAERQELQRKKA 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 697096319  395 KLIYMQDEICRRYKQYHQQMQMVVSSFETVAGLSAATPYISLALKSISQHFRSLRNSIS 453
Cdd:pfam07526  81 KLLSMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAKPYTALALRTISRHFRCLRDAIS 139
Homeobox_KN pfam05920
Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to ...
 530-568 5.23e-18

Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to human and plants. They were first identified as TALE homeobox genes in eukaryotes, (including KNOX and MEIS genes). They have been recently classified.


:

Pssm-ID: 428673  Cd Length: 39  Bit Score: 77.56  E-value: 5.23e-18
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 697096319  530 LFDHFLHPYPTDSDKHMLATQTGLTRNQVSNWFINARVR 568
Cdd:pfam05920   1 LYEHLHNPYPSEEEKAELAKETGLSRKQISNWFINARRR 39
 
Name Accession Description Interval E-value
POX pfam07526
Associated with HOX; The function of this domain is unknown. It is often found in plant ...
 315-453 1.01e-48

Associated with HOX; The function of this domain is unknown. It is often found in plant proteins associated with pfam00046.


Pssm-ID: 429514  Cd Length: 139  Bit Score: 167.83  E-value: 1.01e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697096319  315 ILKSSKFLRPAQQLMDELCNLAAGSNAVKSCIFSKKVREGGVRVSCDGNAAESSSGAIVGDSGGSSAESNGRPDYLQKKA 394
Cdd:pfam07526   1 VLLRSRYLKPAQELLDEVVSVGGKSIASKSSSSSVSKKEDSEDGGSSQSGGGEGGGGSSSGGGSPSLSSAERQELQRKKA 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 697096319  395 KLIYMQDEICRRYKQYHQQMQMVVSSFETVAGLSAATPYISLALKSISQHFRSLRNSIS 453
Cdd:pfam07526  81 KLLSMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAKPYTALALRTISRHFRCLRDAIS 139
POX smart00574
domain associated with HOX domains;
310-454 1.71e-43

domain associated with HOX domains;


Pssm-ID: 214728  Cd Length: 140  Bit Score: 153.30  E-value: 1.71e-43
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697096319   310 TGYATILKSSKFLRPAQQLMDELCNlaagsnaVKSCIFSKKVREGGvrvscDGNAAESSSGAIVGDSGGSSAESNGRP-- 387
Cdd:smart00574   1 TGGVFILRNSKYLKAAQELLDEFCN-------VGRGSSKKKKQSGN-----DSPVSTSSNEGGGENLSGGSSSSEVPPls 68

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 697096319   388 -----DYLQKKAKLIYMQDEICRRYKQYHQQMQMVVSSFETVAGLSAATPYISLALKSISQHFRSLRNSISD 454
Cdd:smart00574  69 taerqELQRKKAKLLSMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTISRHFRCLKDAIAG 140
Homeobox_KN pfam05920
Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to ...
 530-568 5.23e-18

Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to human and plants. They were first identified as TALE homeobox genes in eukaryotes, (including KNOX and MEIS genes). They have been recently classified.


Pssm-ID: 428673  Cd Length: 39  Bit Score: 77.56  E-value: 5.23e-18
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 697096319  530 LFDHFLHPYPTDSDKHMLATQTGLTRNQVSNWFINARVR 568
Cdd:pfam05920   1 LYEHLHNPYPSEEEKAELAKETGLSRKQISNWFINARRR 39
homeodomain cd00086
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ...
 512-573 3.17e-11

Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.


Pssm-ID: 238039 [Multi-domain]  Cd Length: 59  Bit Score: 59.18  E-value: 3.17e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 697096319 512 WRPQRGLPERAVAILRAWlFDHflHPYPTDSDKHMLATQTGLTRNQVSNWFINARVRVWKPM 573
Cdd:cd00086    1 RRKRTRFTPEQLEELEKE-FEK--NPYPSREEREELAKELGLTERQVKIWFQNRRAKLKRSE 59
HOX smart00389
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ...
 518-571 2.03e-09

Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes


Pssm-ID: 197696 [Multi-domain]  Cd Length: 57  Bit Score: 53.79  E-value: 2.03e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 697096319   518 LPERAVAILRAWlFDHflHPYPTDSDKHMLATQTGLTRNQVSNWFINARVRvWK 571
Cdd:smart00389   8 FTPEQLEELEKE-FQK--NPYPSREEREELAKKLGLSERQVKVWFQNRRAK-WK 57
 
Name Accession Description Interval E-value
POX pfam07526
Associated with HOX; The function of this domain is unknown. It is often found in plant ...
 315-453 1.01e-48

Associated with HOX; The function of this domain is unknown. It is often found in plant proteins associated with pfam00046.


Pssm-ID: 429514  Cd Length: 139  Bit Score: 167.83  E-value: 1.01e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697096319  315 ILKSSKFLRPAQQLMDELCNLAAGSNAVKSCIFSKKVREGGVRVSCDGNAAESSSGAIVGDSGGSSAESNGRPDYLQKKA 394
Cdd:pfam07526   1 VLLRSRYLKPAQELLDEVVSVGGKSIASKSSSSSVSKKEDSEDGGSSQSGGGEGGGGSSSGGGSPSLSSAERQELQRKKA 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 697096319  395 KLIYMQDEICRRYKQYHQQMQMVVSSFETVAGLSAATPYISLALKSISQHFRSLRNSIS 453
Cdd:pfam07526  81 KLLSMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAKPYTALALRTISRHFRCLRDAIS 139
POX smart00574
domain associated with HOX domains;
310-454 1.71e-43

domain associated with HOX domains;


Pssm-ID: 214728  Cd Length: 140  Bit Score: 153.30  E-value: 1.71e-43
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 697096319   310 TGYATILKSSKFLRPAQQLMDELCNlaagsnaVKSCIFSKKVREGGvrvscDGNAAESSSGAIVGDSGGSSAESNGRP-- 387
Cdd:smart00574   1 TGGVFILRNSKYLKAAQELLDEFCN-------VGRGSSKKKKQSGN-----DSPVSTSSNEGGGENLSGGSSSSEVPPls 68

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 697096319   388 -----DYLQKKAKLIYMQDEICRRYKQYHQQMQMVVSSFETVAGLSAATPYISLALKSISQHFRSLRNSISD 454
Cdd:smart00574  69 taerqELQRKKAKLLSMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTISRHFRCLKDAIAG 140
Homeobox_KN pfam05920
Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to ...
 530-568 5.23e-18

Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to human and plants. They were first identified as TALE homeobox genes in eukaryotes, (including KNOX and MEIS genes). They have been recently classified.


Pssm-ID: 428673  Cd Length: 39  Bit Score: 77.56  E-value: 5.23e-18
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 697096319  530 LFDHFLHPYPTDSDKHMLATQTGLTRNQVSNWFINARVR 568
Cdd:pfam05920   1 LYEHLHNPYPSEEEKAELAKETGLSRKQISNWFINARRR 39
homeodomain cd00086
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ...
 512-573 3.17e-11

Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.


Pssm-ID: 238039 [Multi-domain]  Cd Length: 59  Bit Score: 59.18  E-value: 3.17e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 697096319 512 WRPQRGLPERAVAILRAWlFDHflHPYPTDSDKHMLATQTGLTRNQVSNWFINARVRVWKPM 573
Cdd:cd00086    1 RRKRTRFTPEQLEELEKE-FEK--NPYPSREEREELAKELGLTERQVKIWFQNRRAKLKRSE 59
HOX smart00389
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ...
 518-571 2.03e-09

Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes


Pssm-ID: 197696 [Multi-domain]  Cd Length: 57  Bit Score: 53.79  E-value: 2.03e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 697096319   518 LPERAVAILRAWlFDHflHPYPTDSDKHMLATQTGLTRNQVSNWFINARVRvWK 571
Cdd:smart00389   8 FTPEQLEELEKE-FQK--NPYPSREEREELAKKLGLSERQVKVWFQNRRAK-WK 57
Homeodomain pfam00046
Homeodomain;
536-571 1.10e-05

Homeodomain;


Pssm-ID: 459649 [Multi-domain]  Cd Length: 57  Bit Score: 43.26  E-value: 1.10e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 697096319  536 HPYPTDSDKHMLATQTGLTRNQVSNWFINARVRvWK 571
Cdd:pfam00046  22 NPYPSAEEREELAAQLGLTERQVKVWFQNRRAK-WK 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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