|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-326 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 663.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 1 THYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYV 80
Cdd:MTH00119 54 MHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 81 LPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGIS 160
Cdd:MTH00119 134 LPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLN 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 161 SNCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVL 240
Cdd:MTH00119 214 SNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 241 ALAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTIILILFPITSSL 320
Cdd:MTH00119 294 ALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGAL 373
|
....*.
gi 694881737 321 ENKILN 326
Cdd:MTH00119 374 ENKMLN 379
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
2-321 |
5.29e-116 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 340.61 E-value: 5.29e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYlyKE----TWNTGVILLLTLMATAFV 77
Cdd:COG1290 63 YYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFT 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 78 GYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFMIAGLALIHLTFLHESGSNNP 156
Cdd:COG1290 141 GYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 157 LGI----SSNCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNllGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSI 232
Cdd:COG1290 221 PGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAI 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 233 P--NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVehPFIIIGQLASLTYFTII 310
Cdd:COG1290 299 PgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFF 376
|
330
....*....|.
gi 694881737 311 LILFPITSSLE 321
Cdd:COG1290 377 LIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-154 |
4.12e-74 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 226.87 E-value: 4.12e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSY--LYKETWNTGVILLLTLMATAFVGY 79
Cdd:cd00284 46 HYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGY 125
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 694881737 80 VLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSN 154
Cdd:cd00284 126 VLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
2-152 |
5.68e-64 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 200.69 E-value: 5.68e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYG--SYLYKETWNTGVILLLTLMATAFVGY 79
Cdd:pfam00033 37 YYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGY 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 694881737 80 VLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESG 152
Cdd:pfam00033 117 VLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
206-273 |
8.89e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.73 E-value: 8.89e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 694881737 206 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLSPLLHKSKQRTMAF-RPISQLLF 273
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVF 133
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-326 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 663.52 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 1 THYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYV 80
Cdd:MTH00119 54 MHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 81 LPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGIS 160
Cdd:MTH00119 134 LPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLN 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 161 SNCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVL 240
Cdd:MTH00119 214 SNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 241 ALAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTIILILFPITSSL 320
Cdd:MTH00119 294 ALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGAL 373
|
....*.
gi 694881737 321 ENKILN 326
Cdd:MTH00119 374 ENKMLN 379
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
2-326 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 596.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVL 81
Cdd:MTH00131 54 HYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 82 PWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISS 161
Cdd:MTH00131 134 PWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNS 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 162 NCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 241
Cdd:MTH00131 214 DADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 242 LAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTIILILFPITSSLE 321
Cdd:MTH00131 294 LLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLE 373
|
....*
gi 694881737 322 NKILN 326
Cdd:MTH00131 374 NKALE 378
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
2-325 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 587.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVL 81
Cdd:MTH00100 54 HYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 82 PWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISS 161
Cdd:MTH00100 134 PWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPS 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 162 NCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 241
Cdd:MTH00100 214 DSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 242 LAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTIILILFPITSSLE 321
Cdd:MTH00100 294 LLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIE 373
|
....
gi 694881737 322 NKIL 325
Cdd:MTH00100 374 NNLL 377
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
2-326 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 579.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVL 81
Cdd:MTH00074 55 HYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 82 PWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISS 161
Cdd:MTH00074 135 PWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNS 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 162 NCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 241
Cdd:MTH00074 215 NPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 242 LAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTIILILFPITSSLE 321
Cdd:MTH00074 295 LLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLE 374
|
....*
gi 694881737 322 NKILN 326
Cdd:MTH00074 375 NKLLK 379
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
2-316 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 552.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVL 81
Cdd:MTH00191 51 HYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 82 PWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISS 161
Cdd:MTH00191 131 PWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 162 NCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 241
Cdd:MTH00191 211 DSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLA 290
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 694881737 242 LAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTIILILFPI 316
Cdd:MTH00191 291 LVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
2-314 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 539.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVL 81
Cdd:MTH00156 44 HYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVL 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 82 PWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISS 161
Cdd:MTH00156 124 PWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNS 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 162 NCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 241
Cdd:MTH00156 204 NIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIA 283
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 694881737 242 LAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTIILILF 314
Cdd:MTH00156 284 LVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-325 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 529.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 1 THYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYV 80
Cdd:MTH00145 54 MHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 81 LPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGIS 160
Cdd:MTH00145 134 LPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLD 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 161 SNCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVL 240
Cdd:MTH00145 214 SDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVI 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 241 ALAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTIILILfPITSSL 320
Cdd:MTH00145 294 ALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLIL-PLVQKL 372
|
....*
gi 694881737 321 ENKIL 325
Cdd:MTH00145 373 WDNIL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
2-326 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 517.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVL 81
Cdd:MTH00034 54 HYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 82 PWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISS 161
Cdd:MTH00034 134 PWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNS 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 162 NCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 241
Cdd:MTH00034 214 NYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIA 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 242 LAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTIILILFPITSSLE 321
Cdd:MTH00034 294 LVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLE 373
|
....*
gi 694881737 322 NKILN 326
Cdd:MTH00034 374 NKLIF 378
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
2-325 |
2.07e-175 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 490.73 E-value: 2.07e-175
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVL 81
Cdd:MTH00016 55 HYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 82 PWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISS 161
Cdd:MTH00016 135 PWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNS 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 162 NCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 241
Cdd:MTH00016 215 NSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 242 LAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTiILILFPITSSLE 321
Cdd:MTH00016 295 MFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFF-YFMINPLLMKLW 373
|
....
gi 694881737 322 NKIL 325
Cdd:MTH00016 374 DKLL 377
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
2-326 |
2.11e-158 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 447.62 E-value: 2.11e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVL 81
Cdd:MTH00053 55 HYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 82 PWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISS 161
Cdd:MTH00053 135 PWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRS 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 162 NCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 241
Cdd:MTH00053 215 DIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 242 LAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTIILILFPITSSLE 321
Cdd:MTH00053 295 LVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLE 374
|
....*
gi 694881737 322 NKILN 326
Cdd:MTH00053 375 NKLLK 379
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
2-326 |
4.58e-158 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 446.84 E-value: 4.58e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVL 81
Cdd:MTH00022 53 HYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 82 PWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISS 161
Cdd:MTH00022 133 PWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNS 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 162 NCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 241
Cdd:MTH00022 213 SVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVA 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 242 LAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTIILILFPITSSLE 321
Cdd:MTH00022 293 MFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELE 372
|
....*
gi 694881737 322 NKILN 326
Cdd:MTH00022 373 NQLLF 377
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
2-326 |
4.48e-147 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 418.94 E-value: 4.48e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVL 81
Cdd:MTH00224 55 HYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 82 PWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISS 161
Cdd:MTH00224 135 PWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINA 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 162 NCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 241
Cdd:MTH00224 215 DSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 242 LAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTiILILFPITSSLE 321
Cdd:MTH00224 295 LFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFS-YFIISPAISKLW 373
|
....*
gi 694881737 322 NKILN 326
Cdd:MTH00224 374 DDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
2-322 |
4.51e-119 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 348.08 E-value: 4.51e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVL 81
Cdd:MTH00033 51 HYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 82 PWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISS 161
Cdd:MTH00033 131 PWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVG 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 162 NCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFS--PNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGV 239
Cdd:MTH00033 211 LSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 240 LALAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPV-EHPFIIIGQLASLTYFTIILILFPITS 318
Cdd:MTH00033 291 LALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLG 370
|
....
gi 694881737 319 SLEN 322
Cdd:MTH00033 371 YLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
2-321 |
5.29e-116 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 340.61 E-value: 5.29e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYlyKE----TWNTGVILLLTLMATAFV 77
Cdd:COG1290 63 YYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFT 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 78 GYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFMIAGLALIHLTFLHESGSNNP 156
Cdd:COG1290 141 GYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 157 LGI----SSNCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNllGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSI 232
Cdd:COG1290 221 PGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAI 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 233 P--NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTWVGSQPVehPFIIIGQLASLTYFTII 310
Cdd:COG1290 299 PgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFF 376
|
330
....*....|.
gi 694881737 311 LILFPITSSLE 321
Cdd:COG1290 377 LIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
2-314 |
5.13e-104 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 308.79 E-value: 5.13e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVL 81
Cdd:MTH00086 43 YYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVL 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 82 PWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISS 161
Cdd:MTH00086 123 VWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHG 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 162 NCDKIPFHPYFSLKDLLGFaIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLA 241
Cdd:MTH00086 203 DYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIA 281
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 694881737 242 LAASVLILFLSPLLHKSkqrTMAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASLTYFTIILILF 314
Cdd:MTH00086 282 LLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
3-314 |
4.13e-82 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 252.60 E-value: 4.13e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 3 YTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGVILLLTLMATAFVGYVLP 82
Cdd:MTH00046 46 YVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILP 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 83 WGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSNNPLGISSN 162
Cdd:MTH00046 126 WHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNG 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 163 -CDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGvLA 241
Cdd:MTH00046 206 ySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LV 284
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 694881737 242 LAASVLILFLSPLLHKSKqrtmAFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLASltyFTIILILF 314
Cdd:MTH00046 285 LVLSFLFFLWVPTFNGSS----VYSVWRQVNFWLIVSLFFSLSYLGGCHPEYPYLLISQLFS---VLMVLLLF 350
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-154 |
4.12e-74 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 226.87 E-value: 4.12e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSY--LYKETWNTGVILLLTLMATAFVGY 79
Cdd:cd00284 46 HYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGY 125
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 694881737 80 VLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESGSN 154
Cdd:cd00284 126 VLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
2-152 |
5.68e-64 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 200.69 E-value: 5.68e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYG--SYLYKETWNTGVILLLTLMATAFVGY 79
Cdd:pfam00033 37 YYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGY 116
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 694881737 80 VLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGLALIHLTFLHESG 152
Cdd:pfam00033 117 VLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
155-302 |
1.35e-54 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 175.14 E-value: 1.35e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 155 NPLGISSNCDKIPFHPYFSLKDLLGFAIMLLLLSTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 234
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 694881737 235 KLGGVLALAASVLILFLSPLLHKSKQRTMaFRPISQLLFWALAANLFILTWVGSQPVEHPFIIIGQLA 302
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
206-306 |
4.43e-48 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 156.48 E-value: 4.43e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 206 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPISQLLFWALAANLFILTW 285
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 694881737 286 VGSQPVEHPFIIIGQLASLTY 306
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
36-201 |
1.08e-45 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 152.78 E-value: 1.08e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 36 SFFFICIYLHIARGFYYGSYLYKE--TWNTGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAW 113
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 114 GGFSVDNPTLTRFFALHF-LLPFMIAGLALIHLTFLHESGSNNPLGISSNCDKIPFHPYFSLKDLLGFAIMLLLLSTLAL 192
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 694881737 193 FSPNLLGDP 201
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
2-157 |
9.96e-30 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 112.88 E-value: 9.96e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKE--TWNTGVILLLTLMATAFVGY 79
Cdd:PRK03735 65 YYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRelNWVVGVLIFFVTVGLGFTGY 144
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 694881737 80 VLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFMIAGLALIHLTFLHESGSNNPL 157
Cdd:PRK03735 145 LLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
2-157 |
3.14e-28 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 108.65 E-value: 3.14e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881737 2 HYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKE--TWNTGVILLLTLMATAFVGY 79
Cdd:CHL00070 57 YYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRelTWVTGVVLAVLTVSFGVTGY 136
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 694881737 80 VLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFMIAGLALIHLTFLHESGSNNPL 157
Cdd:CHL00070 137 SLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
206-273 |
3.28e-11 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 60.79 E-value: 3.28e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 694881737 206 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLSPLLHK-SKQRTMAFRPISQLLF 273
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENvNKFQNPFRRPVATTVF 133
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
206-273 |
2.67e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 58.27 E-value: 2.67e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 694881737 206 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLSPLLHKSKQRTMAF-RPISQLLF 273
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPVATAVF 134
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
206-273 |
8.89e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.73 E-value: 8.89e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 694881737 206 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLSPLLHKSKQRTMAF-RPISQLLF 273
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVF 133
|
|
| |
