|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-333 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 675.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00119 47 LTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00119 127 TAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGS 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00119 207 NNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIP 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSIILIL 320
Cdd:MTH00119 287 NKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLIL 366
|
330
....*....|...
gi 694881715 321 FPLTSSLENKLLN 333
Cdd:MTH00119 367 FPLLGALENKMLN 379
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-328 |
4.16e-119 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 348.70 E-value: 4.16e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYlyKE----TWNTGIILLL 76
Cdd:COG1290 55 LTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 77 ALMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFMITGLAIIHLTFL 155
Cdd:COG1290 133 LTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 156 HESGSNNPLGI----SSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNllGDPENFTPANPLTTPPHIKPEWYFLF 231
Cdd:COG1290 213 HRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLP 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 232 AYAILRSIP--NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVehPFIIIGQLA 309
Cdd:COG1290 291 FYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSIN 368
|
330
....*....|....*....
gi 694881715 310 SLTYFSIILILFPLTSSLE 328
Cdd:COG1290 369 TVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-161 |
9.91e-76 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 231.10 E-value: 9.91e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSY--LYKETWNTGIILLLAL 78
Cdd:cd00284 38 LTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLT 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 79 MATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHES 158
Cdd:cd00284 118 MATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQ 197
|
...
gi 694881715 159 GSN 161
Cdd:cd00284 198 GSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-159 |
1.07e-65 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 205.31 E-value: 1.07e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYG--SYLYKETWNTGIILLLAL 78
Cdd:pfam00033 29 LTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPRELTWVIGVILLVLT 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 79 MATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHES 158
Cdd:pfam00033 109 MSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHET 188
|
.
gi 694881715 159 G 159
Cdd:pfam00033 189 G 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
194-280 |
9.72e-11 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 59.43 E-value: 9.72e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 194 LTTLALFSPNLLGDPenftpANPLTTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLSPLLHKSKQRTMAF- 272
Cdd:TIGR01156 51 VVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFr 125
|
....*...
gi 694881715 273 RPVSQLLF 280
Cdd:TIGR01156 126 RPVATTVF 133
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-333 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 675.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00119 47 LTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00119 127 TAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGS 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00119 207 NNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIP 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSIILIL 320
Cdd:MTH00119 287 NKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLIL 366
|
330
....*....|...
gi 694881715 321 FPLTSSLENKLLN 333
Cdd:MTH00119 367 FPLLGALENKMLN 379
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-333 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 612.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00131 46 LTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMM 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00131 126 TAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGS 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00131 206 NNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIP 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSIILIL 320
Cdd:MTH00131 286 NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVL 365
|
330
....*....|...
gi 694881715 321 FPLTSSLENKLLN 333
Cdd:MTH00131 366 MPLAGWLENKALE 378
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-332 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 606.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00100 46 LTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMA 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00100 126 TAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGS 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00100 206 NNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIP 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSIILIL 320
Cdd:MTH00100 286 NKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILIL 365
|
330
....*....|..
gi 694881715 321 FPLTSSLENKLL 332
Cdd:MTH00100 366 MPIASLIENNLL 377
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-333 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 591.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00074 47 ITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00074 127 TAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGS 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00074 207 NNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIP 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSIILIL 320
Cdd:MTH00074 287 NKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIII 366
|
330
....*....|...
gi 694881715 321 FPLTSSLENKLLN 333
Cdd:MTH00074 367 IPLTGWLENKLLK 379
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-323 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 563.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00191 43 LTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMA 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00191 123 TAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGS 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00191 203 NNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIP 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSIILIL 320
Cdd:MTH00191 283 NKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLL 362
|
...
gi 694881715 321 FPL 323
Cdd:MTH00191 363 FPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-321 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 554.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00156 36 ITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMA 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00156 116 TAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00156 196 NNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIP 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSIILIL 320
Cdd:MTH00156 276 NKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
.
gi 694881715 321 F 321
Cdd:MTH00156 356 P 356
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-332 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 540.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00145 47 LTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMG 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00145 127 TAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGS 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00145 207 NNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIP 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSIILIL 320
Cdd:MTH00145 287 NKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLIL 366
|
330
....*....|..
gi 694881715 321 fPLTSSLENKLL 332
Cdd:MTH00145 367 -PLVQKLWDNIL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-333 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 530.82 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00034 46 ITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTML 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00034 126 TAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGS 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00034 206 NNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIP 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSIILIL 320
Cdd:MTH00034 286 NKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFF 365
|
330
....*....|...
gi 694881715 321 FPLTSSLENKLLN 333
Cdd:MTH00034 366 FPLISYLENKLIF 378
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-332 |
3.10e-180 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 503.44 E-value: 3.10e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00016 47 LTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00016 127 TAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGS 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00016 207 NNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIP 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSiILIL 320
Cdd:MTH00016 287 NKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFF-YFMI 365
|
330
....*....|..
gi 694881715 321 FPLTSSLENKLL 332
Cdd:MTH00016 366 NPLLMKLWDKLL 377
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-333 |
3.66e-161 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 454.93 E-value: 3.66e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00053 47 ITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMIL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00053 127 TAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGS 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00053 207 NNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIP 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSIILIL 320
Cdd:MTH00053 287 NKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLIL 366
|
330
....*....|...
gi 694881715 321 FPLTSSLENKLLN 333
Cdd:MTH00053 367 MPLAGYLENKLLK 379
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-333 |
3.12e-160 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 452.62 E-value: 3.12e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00022 45 ITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMA 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00022 125 TAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGS 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00022 205 NNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIP 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSIILIL 320
Cdd:MTH00022 285 NKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVL 364
|
330
....*....|...
gi 694881715 321 FPLTSSLENKLLN 333
Cdd:MTH00022 365 IPLLGELENQLLF 377
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-333 |
2.88e-153 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 435.12 E-value: 2.88e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00224 47 LTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00224 127 TAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGS 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00224 207 NNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIP 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSiILIL 320
Cdd:MTH00224 287 NKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFS-YFII 365
|
330
....*....|...
gi 694881715 321 FPLTSSLENKLLN 333
Cdd:MTH00224 366 SPAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-329 |
2.26e-122 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 356.56 E-value: 2.26e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00033 43 LTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMML 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00033 123 TAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGS 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFS--PNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRS 238
Cdd:MTH00033 203 NEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 239 IPNKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPV-EHPFIIIGQLASLTYFSII 317
Cdd:MTH00033 283 IPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYF 362
|
330
....*....|..
gi 694881715 318 LILFPLTSSLEN 329
Cdd:MTH00033 363 LVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-328 |
4.16e-119 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 348.70 E-value: 4.16e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYlyKE----TWNTGIILLL 76
Cdd:COG1290 55 LTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAY--KKprelNWIIGVLLLL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 77 ALMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFMITGLAIIHLTFL 155
Cdd:COG1290 133 LTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 156 HESGSNNPLGI----SSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNllGDPENFTPANPLTTPPHIKPEWYFLF 231
Cdd:COG1290 213 HRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLP 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 232 AYAILRSIP--NKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTWVGSQPVehPFIIIGQLA 309
Cdd:COG1290 291 FYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSIN 368
|
330
....*....|....*....
gi 694881715 310 SLTYFSIILILFPLTSSLE 328
Cdd:COG1290 369 TVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-321 |
1.63e-108 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 320.35 E-value: 1.63e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00086 35 LTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMM 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00086 115 EAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGS 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSNCDKIPFHPYFSLKDLLGFtIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIP 240
Cdd:MTH00086 195 TSSLYCHGDYDKICFGPEYWNKDAYNI-IFWLVFIIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIP 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 241 NKLGGVLALAASVLILFLSPLLHKSkqrTMAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASLTYFSIILIL 320
Cdd:MTH00086 274 NKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
|
.
gi 694881715 321 F 321
Cdd:MTH00086 351 L 351
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-321 |
5.41e-85 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 260.30 E-value: 5.41e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKETWNTGIILLLALMA 80
Cdd:MTH00046 37 LTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 81 TAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHESGS 160
Cdd:MTH00046 117 EAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGS 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 161 NNPLGISSN-CDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSI 239
Cdd:MTH00046 197 SNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSI 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 240 PNKLGGvLALAASVLILFLSPLLHKSKqrtmAFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLASltyFSIILI 319
Cdd:MTH00046 277 NSKIGG-LVLVLSFLFFLWVPTFNGSS----VYSVWRQVNFWLIVSLFFSLSYLGGCHPEYPYLLISQLFS---VLMVLL 348
|
..
gi 694881715 320 LF 321
Cdd:MTH00046 349 LF 350
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-161 |
9.91e-76 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 231.10 E-value: 9.91e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSY--LYKETWNTGIILLLAL 78
Cdd:cd00284 38 LTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLT 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 79 MATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHES 158
Cdd:cd00284 118 MATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQ 197
|
...
gi 694881715 159 GSN 161
Cdd:cd00284 198 GSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-159 |
1.07e-65 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 205.31 E-value: 1.07e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYG--SYLYKETWNTGIILLLAL 78
Cdd:pfam00033 29 LTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGgfSYPRELTWVIGVILLVLT 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 79 MATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMITGLAIIHLTFLHES 158
Cdd:pfam00033 109 MSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHET 188
|
.
gi 694881715 159 G 159
Cdd:pfam00033 189 G 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
162-309 |
2.42e-56 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 179.76 E-value: 2.42e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 162 NPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLALFSPNLLGDPENFTPANPLTTPPHIKPEWYFLFAYAILRSIPN 241
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 694881715 242 KLGGVLALAASVLILFLSPLLHKSKQRTMaFRPVSQLLFWTLAANLSILTWVGSQPVEHPFIIIGQLA 309
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
213-313 |
6.25e-46 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 151.48 E-value: 6.25e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 213 PANPLTTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLSPLLHKSKQRTMAFRPVSQLLFWTLAANLSILTW 292
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 694881715 293 VGSQPVEHPFIIIGQLASLTY 313
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
43-208 |
7.84e-46 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 153.55 E-value: 7.84e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 43 SFFFICIYLHIARGFYYGSYLYKE--TWNTGIILLLALMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAW 120
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 121 GGFSVDNPTLTRFFALHF-LLPFMITGLAIIHLTFLHESGSNNPLGISSNCDKIPFHPYFSLKDLLGFTIMLLPLTTLAL 199
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 694881715 200 FSPNLLGDP 208
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
1-164 |
4.05e-30 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 114.04 E-value: 4.05e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 1 LTGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKE--TWNTGIILLLAL 78
Cdd:PRK03735 57 LSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRelNWVVGVLIFFVT 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 79 MATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFMITGLAIIHLTFLHE 157
Cdd:PRK03735 137 VGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMIRK 216
|
....*..
gi 694881715 158 SGSNNPL 164
Cdd:PRK03735 217 QGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
2-164 |
2.85e-27 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 106.34 E-value: 2.85e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 2 TGLLLATHYTADTSLAFSSVANTCRNVQYGWLIRNLHANGASFFFICIYLHIARGFYYGSYLYKE--TWNTGIILLLALM 79
Cdd:CHL00070 50 TGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRelTWVTGVVLAVLTV 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 80 ATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALH-FLLPFMITGLAIIHLTFLHES 158
Cdd:CHL00070 130 SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQ 209
|
....*.
gi 694881715 159 GSNNPL 164
Cdd:CHL00070 210 GISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
197-280 |
2.97e-12 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 63.87 E-value: 2.97e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 197 LALFSPNLLGDPenftpANPLTTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLSPLLHK-SKQRTMAFRPV 275
Cdd:CHL00058 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENvNKFQNPFRRPV 128
|
....*
gi 694881715 276 SQLLF 280
Cdd:CHL00058 129 ATTVF 133
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
197-280 |
2.57e-11 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 61.35 E-value: 2.57e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 197 LALFSPNLLGDPenftpANPLTTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLSPLLHKSKQRTMAF-RPV 275
Cdd:COG5679 55 LAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPV 129
|
....*
gi 694881715 276 SQLLF 280
Cdd:COG5679 130 ATAVF 134
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
194-280 |
9.72e-11 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 59.43 E-value: 9.72e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 694881715 194 LTTLALFSPNLLGDPenftpANPLTTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLSPLLHKSKQRTMAF- 272
Cdd:TIGR01156 51 VVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFr 125
|
....*...
gi 694881715 273 RPVSQLLF 280
Cdd:TIGR01156 126 RPVATTVF 133
|
|
|