|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-443 |
5.66e-170 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 484.27 E-value: 5.66e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 1 MLKYLLMMIFLIPLCLLKNSWWLVHSLMFLFSFIFMVCVYSYCDLNMISYYFGVDFFSFILILLSFWICSLMIMASVSIN 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 81 LSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFK 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 161 VYDFVNTLYFPLLFDFGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTISF 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 241 LGLKFNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 321 IYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 691192243 401 YSQHGSYYSGVYTFTLGYLREYHLLFLHWFPLNILCLKGEYFF 443
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
47-444 |
3.82e-123 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 364.16 E-value: 3.82e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 47 MISYYFGVDFFSFILILLSFWICSLMIMASVSINLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLIL 126
Cdd:MTH00150 15 SLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 127 ILGWGYQPERLQAGIYLIFYTLVASLPLLLVL---FKVYDFVNTLYFPLLFDFGSYYFMFYVFMILAFLVKMPMFLFHLW 203
Cdd:MTH00150 95 ILGWGYQPERLQAGMYMMLYTVGASLPLLLVIlwmSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLW 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 204 LPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGLKFNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMS 283
Cdd:MTH00150 175 LPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMS 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 284 MVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNL 363
Cdd:MTH00150 255 LVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 364 IGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMYSYSQHGSYYSGVYTFTLGYLREYHLLFLHWFPLNILCLKGEYFF 443
Cdd:MTH00150 335 LSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLLF 414
|
.
gi 691192243 444 V 444
Cdd:MTH00150 415 M 415
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-440 |
1.17e-120 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 359.05 E-value: 1.17e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 1 MLKYLLMMIFLIPLCLLKNSWWLVHS---LMFLFSFIFMVCVYSYCDLNMISYYFGVDFFSFILILLSFWICSLMIMASV 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 78 SINLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLPLLLV 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 158 LFKVYDFVNTLYFPLL-FDFGSYYF--MFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSsMEPPSIYLmnLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 235 MKTISFLGLKFNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 315 FCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 691192243 395 TLYMYSYSQHGSYYSGVYTFTLGYLREYHLLFLHWFPLNILCLKGE 440
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
2-444 |
1.84e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 353.52 E-value: 1.84e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 2 LKYLLMMIFLIPLCLLKNSWWLVHSLMFLFSFIFMVCVYSYCDL--NMISYYFGVDFFSFILILLSFWICSLMIMASVSI 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLmtSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 80 NLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLPLLLVLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 160 KVYDFVNTLYFPLLFDFGSYYFMFYVFMI---LAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMK 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYLFLYWIflmLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 237 TISFLGLKFNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 317 LSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 691192243 397 YMYSYSQHGSYYSGVYTFTLGYLREYHLLFLHWFPLNILCLKGEYFFV 444
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFIC 448
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-440 |
1.33e-115 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 346.41 E-value: 1.33e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 1 MLKYLLMMIFLIPLCLL--KNSWWL---VHSLMF-LFSFIFMVCvySYCDLNMISYYFGVDFFSFILILLSFWICSLMIM 74
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLskPKFLWTnttTYSLLIaLLSLQWLKP--PYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMIL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 75 ASVS--INLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASL 152
Cdd:MTH00124 79 ASQNhlQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 153 PLLLVLFKVYDFVNTLYFPLLFDFGSY------YFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKL 226
Cdd:MTH00124 159 PLLIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 227 GGYGIFRVMKTISFLGLKFNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVG 306
Cdd:MTH00124 239 GGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 307 HGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIF 386
Cdd:MTH00124 319 HGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGL 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 691192243 387 LSFFSAVYTLYMYSYSQHGSYYSGVYTFTLGYLREYHLLFLHWFPLNILCLKGE 440
Cdd:MTH00124 399 ATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPE 452
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-443 |
3.19e-109 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 329.95 E-value: 3.19e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 1 MLKYLLMMIFLIPLCLLKNSWWL-----VHSLMFLFSFIFMVCvYSYCDLNMISYYFGVDFFSFILILLSFWICSLMIMA 75
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLwtlttTNSLIIAFLSLMWFN-LPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 76 SVS--INLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLP 153
Cdd:MTH00068 80 SQNhlKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 154 LLLVLFKVYDFVNTLYFPLLFDFGSYYFM------FYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMtytnkiWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 228 GYGIFRVMKTISFLGLKFNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGH 307
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFL 387
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 691192243 388 SFFSAVYTLYMYSYSQHGSYYSGVYTFTLGYLREYHLLFLHWFPLNILCLKGEYFF 443
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELIS 455
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-432 |
2.55e-107 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 325.01 E-value: 2.55e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 1 MLKYLLMMIFLIPLCLLKNSWW---LVHSLMFLFSFIFMVCVYSYCDLNMISYYFGVDFFSFILILLSFWICSLMIMASV 77
Cdd:MTH00044 3 TLILLSLGIAITSWIVPKNKLWpisISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 78 SI--NLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLPLL 155
Cdd:MTH00044 83 NHlsNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 156 LVLFKVYDFVNTLYFPLLF------DFGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGY 229
Cdd:MTH00044 163 ISLIAIYSSSSSLSIPLSElnwltsLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 230 GIFRVMKTISFLGLKF-NYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHG 308
Cdd:MTH00044 243 GLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 309 LCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLS 388
Cdd:MTH00044 323 LVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLAT 402
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 691192243 389 FFSAVYTLYMYSYSQHGSYYSGVYTFTLGYLREYHLLFLHWFPL 432
Cdd:MTH00044 403 VFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPL 446
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
8.24e-104 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 316.06 E-value: 8.24e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 1 MLKYLLMMIFLIPLCLL-KNSWWLVHSLM--FLFSFIFMVCVYSYCDLNM-ISYYFGVDFFSFILILLSFWICSLMIMAS 76
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLsKNNMIWINTTTysLLISLISLLLLNQPNDNSLnFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 77 VS--INLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLPL 154
Cdd:MTH00110 81 QHhlSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 155 LLVLFKVYDFVNTLYFPL-------LFDFGSYYFMFYVFMiLAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLlqlwaqpLPNSWSNNLLWLACM-MAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 228 GYGIFRVMKTISFLGLKFNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGH 307
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFL 387
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 691192243 388 SFFSAVYTLYMYSYSQHGSYYSGVYTFTLGYLREYHLLFLHWFPLNILCL 437
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSL 449
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
5-432 |
5.36e-99 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 303.40 E-value: 5.36e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 5 LLMMIFLIPLCLLKNSWWLVHSLMFLFSFIFMVCVYSYCDLNMIS--YYFGVDFFSFILILLSFWICSLMIMASVSI--N 80
Cdd:MTH00206 6 LIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFsnLYLSYDPLSSPLVILSCWLLPLMFLASQNHmkN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 81 LSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFK 160
Cdd:MTH00206 86 EPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 161 VYDFVNTLYFPLL---FDFGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKT 237
Cdd:MTH00206 166 LQNSLGSLSLYILyfsKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 238 ISFLGLKFNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCL 317
Cdd:MTH00206 246 LGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 318 SNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLY 397
Cdd:MTH00206 326 ANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLY 405
|
410 420 430
....*....|....*....|....*....|....*
gi 691192243 398 MYSYSQHGSYYSGVYTFTLGYLREYHLLFLHWFPL 432
Cdd:MTH00206 406 MFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPV 440
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-440 |
3.76e-87 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 273.37 E-value: 3.76e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 1 MLKYLLMMIFLIPLCLLKNSWWL-----VHSLMFLFSFIFMVCVYSYCDLNMISYYFGVDFFSFILILLSFWICSLMIMA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLwtttlAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 76 SVSINLSSYHSNFFVFMVLI--LLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLP 153
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLtsLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 154 LLLVLFKVYDFVNTL------YFPLLFDFGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 228 GYGIFRVMKTISFLGLKFNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFL 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 691192243 388 SFFSAVYTLYMYSYSQHGSYYSGVYTFTLGYLREYHLLFLHWFPLNILCLKGE 440
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPE 453
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-399 |
1.43e-56 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 194.14 E-value: 1.43e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 48 ISYYFGVDFFSFILILLSFWICSLMIMASvsINLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILAS--WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 128 LGWGYqPERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYFPLL------FDFGSYYFMFYVFMIlAFLVKMPMFLFH 201
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAelaaapLPLTAQLLLFLAFFI-AFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 202 LWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGLK-FNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVA 280
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAyFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 281 HMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPS 360
Cdd:COG1008 310 HMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGT 389
|
330 340 350
....*....|....*....|....*....|....*....
gi 691192243 361 LNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMY 399
Cdd:COG1008 390 SGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-388 |
9.50e-54 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 181.36 E-value: 9.50e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 113 YIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYFPLLFDF------GSYYFMFYVF 186
Cdd:pfam00361 8 YLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAltgglnSSGLLLLFLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 187 MILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGLKFNYFWLSLGLLGGAIVSMICFR 266
Cdd:pfam00361 88 ILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLAALV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLS-NIIYERLGSRSLLINKGMINLMPMMAL 345
Cdd:pfam00361 168 QTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTMPILAL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 691192243 346 WWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLS 388
Cdd:pfam00361 248 VFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
51-399 |
6.09e-52 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 181.80 E-value: 6.09e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 51 YFGVDFFSFILILLSFWICSLMIMasVSINLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGW 130
Cdd:MTH00204 78 VFAVDGVSLFFILLTTLLIPICIL--ISWKSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 131 GYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTL-YFPLLFDFGSYYFMFYVFM--ILAFLVKMPMFLFHLWLPKA 207
Cdd:MTH00204 156 GSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKWLLVgfFLSLAVKIPQIPFHIWLPQA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 208 HVEAPISGSMILAGVLLKLGGYGIFRVMKTIsFLGLKFNYFWLSLGLLGGAIV--SMICFRQVDLKSLIAYSSVAHMSMV 285
Cdd:MTH00204 236 HVEAPVAGSVILAGILLKLGGYGFLRFSWPL-FPAASEYFAPLIVMLSVIAVIygSLTTCRQVDFKRLIAYSSVAHMGLV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 286 IGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIG 365
Cdd:MTH00204 315 PLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVG 394
|
330 340 350
....*....|....*....|....*....|....
gi 691192243 366 ELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMY 399
Cdd:MTH00204 395 EFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-399 |
1.38e-50 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 178.47 E-value: 1.38e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 48 ISYYFGVDFFSFILILLSFWICSLMIMASvsINLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILI 127
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLAS--WEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 128 LGWGYqPERLQAGIYLIFYTLVASLPLLLVLFKVY-----DFVNTLYFPLL---FDFGSYYFMFYVFMIlAFLVKMPMFL 199
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVvvyynATGTFDIADLLnlpLPPGVQYWLFLAFFI-AFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 200 FHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMktisfLGL------KFNYFWLSLGLLGGAIVSMICFRQVDLKSL 273
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFS-----LPLfpdashEFAPIIITLGVIAIIYGALVALAQTDIKKL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 274 IAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSS 353
Cdd:PRK05846 305 IAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMA 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 691192243 354 NMAAPPSLNLIGE-LSLLNSIMSWSSFSFLVLIFLsFFSAVYTLYMY 399
Cdd:PRK05846 385 SLGLPGTSGFVGEfLILLGSFQVNPVIAFIATTGL-ILAAVYSLWLY 430
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
52-399 |
3.15e-50 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 177.17 E-value: 3.15e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 52 FGVDFFSFILILLSFWICSLMIMasVSINLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWG 131
Cdd:MTH00217 76 FAVDGISIFFLILTALLTPICIL--ISWNSIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 132 YQPERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYFPLL----FDFGSYYFMFYVFMiLAFLVKMPMFLFHLWLPKA 207
Cdd:MTH00217 154 SREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALcclkIEKELQYFIFLGFF-LSLAIKIPKIPFHIWLPQA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 208 HVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGLK-FNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSMVI 286
Cdd:MTH00217 233 HVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEyFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVT 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 287 GGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGE 366
Cdd:MTH00217 313 LGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGE 392
|
330 340 350
....*....|....*....|....*....|....*.
gi 691192243 367 LSllnSIMSWSSFSFLVLIFLSF---FSAVYTLYMY 399
Cdd:MTH00217 393 FL---SLLAAFEYSYIVGVLASLgmvLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-397 |
8.78e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 171.26 E-value: 8.78e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 52 FGVDFFSFILILLSFWICSLMIMasVSINLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWG 131
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSIL--ISWHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 132 YQPERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYFPLLFDF-----GSYYFMFYVFMILAFLVKMPMFLFHLWLPK 206
Cdd:MTH00226 176 SREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCshvvsEQTQKWIFLGIFLAMAVKIPIFPFHIWLPK 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 207 AHVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGLK-FNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSMV 285
Cdd:MTH00226 256 AHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLV 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 286 IGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIG 365
Cdd:MTH00226 336 SITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIG 415
|
330 340 350
....*....|....*....|....*....|..
gi 691192243 366 ELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLY 397
Cdd:MTH00226 416 EYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
6.69e-47 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 168.19 E-value: 6.69e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 48 ISYYFGVDFFSFILILLSFWICSLMIMAS-VSINLSSyhsNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLIL 126
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASwESIQKRV---KEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 127 ILGWGyQPERLQAGIYLIFYTLVASLPLLLVLFKVYdFVNTLYFPLL------FDFGSYYFMFYVFMIlAFLVKMPMFLF 200
Cdd:TIGR01972 146 IGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLY-FLGGGTFDLLellnlpLPFGVQTWLFLAFFI-AFAVKVPLFPL 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 201 HLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTI-SFLGLKFNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSV 279
Cdd:TIGR01972 223 HTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLfPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 280 AHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPP 359
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 691192243 360 SLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMY 399
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
27-418 |
1.55e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 160.07 E-value: 1.55e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 27 LMFLFSFIFMVCVYSYCDLNMISYYFGVDFFSFILILLSFWicslmimasVSINLSSYHSNFFVFMVLILLIMLYCSFSS 106
Cdd:MTH00094 11 LFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFI---------LGLVLLSEKNFNLLILSNLLILICLLFFVS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 107 LSLLSFYIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYFPLLFDFgsyyfMFYVF 186
Cdd:MTH00094 82 SNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSW-----EMFFI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 187 MILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLglkFNYFWLSLGLLGGAIVSMICFR 266
Cdd:MTH00094 157 LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCVF 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALW 346
Cdd:MTH00094 234 QSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLI 313
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 691192243 347 WFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMYSYSQHGSYYSGVYTFTLGY 418
Cdd:MTH00094 314 FSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGL 385
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-393 |
5.12e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 124.76 E-value: 5.12e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 53 GVDFFSFILILLSFWICSLMIMASVSINlssYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWGY 132
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWKVT---RKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 133 QpERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYFPL----LFDF-GSYYFMFYVFMILAFLVKMPMFLFHLWLPKA 207
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYpLALELLLYAGFLIAFGVKLPIFPLHTWLPDA 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 208 HVEAPISGSMILAGVLLKLGGYGIFRVmkTISFLGLKFNYFWLSLGLLGgaIVSMI-----CFRQVDLKSLIAYSSVAHM 282
Cdd:PRK12561 212 HGEASAPVSMILAGVLLKMGGYALIRF--NVQMLPDAHVYFAPALAILG--VVNIIygalnAFAQDNVKRRLAYSSVSHM 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 283 SMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMP-MMALwwFLLSS-SNMAAPPS 360
Cdd:PRK12561 288 GFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPkTFAL--FTASSmASLALPGM 365
|
330 340 350
....*....|....*....|....*....|...
gi 691192243 361 LNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAV 393
Cdd:PRK12561 366 SGFVSELTVFLGITSSDVYSSTFRTITILLAAV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-403 |
2.21e-30 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 121.79 E-value: 2.21e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 52 FGVDFFSFILILLSFWICSLMIMASVSINLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWG 131
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 132 YqPERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYFPLLFDFGSYY-----FMFYVFMILAFLVKMPMFLFHLWLPK 206
Cdd:COG0651 152 T-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELdpgllLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 207 AHVEAPISGSMILAGVLLKLGGYGIFRVMKTI--SFLGLKFNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSM 284
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 285 VIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLI 364
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 691192243 365 GELSLLNSIMSWSSFSFLVLIFL-SFFSAVYTLYMYSYSQ 403
Cdd:COG0651 391 SKWLLLQAALEAGAWLLAAVLLLsSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-393 |
3.38e-26 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 110.95 E-value: 3.38e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 53 GVDFFSFILILLSFWICSLMIMASVSInlsSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWGY 132
Cdd:PRK02546 84 GADGLSMPLILLTGFITTLAVLAAWPV---TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 133 QpERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYFPL----LFDFG-SYYFMFYVFMILAFLVKMPMFLFHLWLPKA 207
Cdd:PRK02546 161 K-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMtalaAKDFGlGFQLLCYAGLLIAYGVKLPIVPLHTWLPDA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 208 HVEAPISGSMILAGVLLKLGGYGIFRVmkTISFLGLKFNYFWLSLGLLGgaIVSMI-----CFRQVDLKSLIAYSSVAHM 282
Cdd:PRK02546 240 HGEATAPVHMLLAGILLKMGGYALLRM--NAGMLPDAHAQFAPLLIVLG--VVNIIyaaltSFAQRNLKRKIAYSSISHM 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 283 SMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLN 362
Cdd:PRK02546 316 GFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSG 395
|
330 340 350
....*....|....*....|....*....|.
gi 691192243 363 LIGELSLLNSIMSWSSFSFLVLIFLSFFSAV 393
Cdd:PRK02546 396 FVAELMVFVGFATSDAYTLPFRVVVVFLAAV 426
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-401 |
5.76e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 101.11 E-value: 5.76e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 52 FGVDFFSFILILLSFWICSLMIMASVSINlsSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILIlGWG 131
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYG--EHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 132 YQPERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYFPLL---FDFGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAH 208
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagaLAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 209 VEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGLKFNYFWLSLgLLGGAIVSMI-----CFRQVDLKSLIAYSSVAHMS 283
Cdd:PRK08375 230 PAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWL-LAVLALLSMLvgslaALGQDDVKRVLAYSTVSQMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 284 MVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNL 363
Cdd:PRK08375 309 YILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGF 388
|
330 340 350
....*....|....*....|....*....|....*....
gi 691192243 364 IGELSLLNSIMSWSSFSFLVLIFL-SFFSAVYTLYMYSY 401
Cdd:PRK08375 389 VSKWYLVVGAVEAGQWLVLAVLLAsSLLALLYFLRIWYR 427
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-338 |
6.35e-23 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 100.93 E-value: 6.35e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 48 ISYYFGVDFFSFILILLSFWICSLMIMASvsiNLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILI 127
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSS---DESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 128 LGWGYQpERLQAGIYLIFYTLVASLPLL---LVLFKVYDFVNTLYFPLLFDF--GSYYFMFYVFMILAFLVKMPMFLFHL 202
Cdd:PRK06473 148 AIWGGQ-RRGYAATKFLLYTAISGILILvsfLGLVWLSGASSFDYEPLRSHTlpLSTQLLLLAPILVGFGIKIPLVPFHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 203 WLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGLKFNYFWLSLGLLGGAIVSMIC-FRQVDLKSLIAYSSVAH 281
Cdd:PRK06473 227 WLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAYSSIGH 306
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 691192243 282 MSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:PRK06473 307 MGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-393 |
3.02e-22 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 98.86 E-value: 3.02e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 52 FGVDFFSFILILLSFWICSLMIMASVSINLSSyhsNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILILGWG 131
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPVTRNS---RLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 132 YQpERLQAGIYLIFYTLVASLPLLLVLFKVYDFVN---TLYFPLLFDfGSYYF----MFYVFMILAFLVKMPMFLFHLWL 204
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSnepTLNFETLAN-QSYPValeiLFYIGFLIAYAVKLPIIPLHTWL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 205 PKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKTISFLGLKFNYFWLSLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMS 283
Cdd:CHL00011 235 PDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMG 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 284 MVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNL 363
Cdd:CHL00011 315 FIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGF 394
|
330 340 350
....*....|....*....|....*....|
gi 691192243 364 IGELSLLNSIMSWSSFSFLVLIFLSFFSAV 393
Cdd:CHL00011 395 VAELIVFFGIITSQKYLLMPKILITFVMAI 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
20-393 |
4.33e-20 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 91.91 E-value: 4.33e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 20 SWWLVHSLMFLFSFIFMVCV--YSYCDLNMISYYFGVDFFSFILILLSFWICSLMIMASVsiNLSSYHSNFFVFMVLILL 97
Cdd:MTH00062 7 GFFLGFLLLLLFCLLYSSGVgcCILVVNNVFNGLFIFDSLSFYLILLVLFLGLYSQVMFY--NLLSGVSRFFLFLSLIFS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 98 IMLYCSFSSLSLlsfYIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYFPLLFDFG 177
Cdd:MTH00062 85 ILCFCVNNSLLF---WFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 178 SYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGLkfnYFWLSLGLLGG 257
Cdd:MTH00062 162 SVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF---LGYLFLCCLFS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 258 AIVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMI 337
Cdd:MTH00062 239 VFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGI 318
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 691192243 338 NLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAV 393
Cdd:MTH00062 319 NGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLV 374
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-394 |
5.23e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 89.00 E-value: 5.23e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 48 ISYYFGVDFFSFILILLSfwiCSLMIMASVSINLSSYHSNFFVFMVLILLIMLYCSFSSLSLLSFYIFFESSLVPTLILI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 128 LGWGYQpERLQAGIYLIFYTLVASLPLLLVLFKV----------YDFVNTLYFPLlfdfgSYYFMFYVFMILAFLVKMPM 197
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIvwlsgstsfdYDAISTQNLSL-----NTQLILLTGLLLGFGIKIPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 198 FLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVmkTISFLGLKFNYFWLSLGLLGGAIV---SMICFRQVDLKSLI 274
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRF--GLQLFPQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMV 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 275 AYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSN 354
Cdd:PRK07363 300 AYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAG 379
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 691192243 355 MAA---PPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVY 394
Cdd:PRK07363 380 MASagiPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-398 |
4.00e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 86.56 E-value: 4.00e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 181 FMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGLKFNYFW-------LSLG 253
Cdd:PRK12667 223 GVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRaalspilIILG 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 254 LLGGAIVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLIN 333
Cdd:PRK12667 303 AVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDEL 382
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 691192243 334 KGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSwSSFSFLVLIFLsFFSAVYTLYM 398
Cdd:PRK12667 383 AGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLE-SGFYLPALVLL-IASAISLVGY 445
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
184-393 |
1.24e-15 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 78.82 E-value: 1.24e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 184 YVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRV-MKTISFLGLKF-NYFWLSLGLLGGAIVS 261
Cdd:PRK06458 217 FVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYyILIDAAIGSDFpGRLLLIFGLLSVLVAA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 262 MICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMP 341
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSP 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 691192243 342 MMAlWWFLLSSSNMA-APPSLNLIGELSLLNSIMS---WSSFSFLVLIFLSFFSAV 393
Cdd:PRK06458 377 LTG-WGLMLGALAIAgMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAAL 431
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
21-387 |
2.33e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 72.07 E-value: 2.33e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 21 WWLVHSLMFLFSFIFMVCVYSYCDLNMISYYFGVDFFSFILILLSFWICSL-MIMASVSINLSSYHSNFF---------V 90
Cdd:PRK08667 36 WLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFHIDRLAAFFIILIgLVSLCVAIYSLGYNEHMSsneranllsA 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 91 FMVLILLIMLYCSFSSLSLLSFyIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYF 170
Cdd:PRK08667 116 LTALFILSMLGVVASANTFSFL-FFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 171 PLLFDFGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGLKFNYFWL 250
Cdd:PRK08667 195 SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLIL 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 251 SLGLLGGAIVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLM-----------VGHGLCSSGLFCLSN 319
Cdd:PRK08667 275 LAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAG 354
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 691192243 320 IIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNS-IMSWSSFSFLVLIFL 387
Cdd:PRK08667 355 SVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESfFQSFSVADPLIKILL 423
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-395 |
1.24e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 69.38 E-value: 1.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 186 FMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTI-----SFLGLKFNYFWLSLGLLGGAIV 260
Cdd:PRK12662 214 FIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 261 SMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLM 340
Cdd:PRK12662 294 SVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSM 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 691192243 341 PMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSF-SFLVLIFLSFFSAVYT 395
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWiGLVVLLVGSGLSVIYV 429
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
51-342 |
1.49e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 69.64 E-value: 1.49e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 51 YFGVDFFSFILILLSFWICSLMIMASVSINLSSYHS-NFFVFMVLILLIMLYcsfSSLSLLSFYIFFESSLVPTLILILg 129
Cdd:PRK08668 64 TFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYfNMFALMSLAGVLGVF---LANDLLTLYIFWEIMTFSSFMMVP- 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 130 WGYQPERLQAGIYLIFyTLVASLPLLLVLFKVYDFVNTLYFP-----LLFDFGSYYFMFYVFMILAF-LVKMPMFLFHLW 203
Cdd:PRK08668 140 MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFAdisqgLINDTSTGFALIVFLFLLAFgVAKAGIFPLHVW 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 204 LPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGL-----------KFNYFWLSLGLLGGAIVSMICFRQVDLKS 272
Cdd:PRK08668 219 APDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKK 298
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 273 LIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPM 342
Cdd:PRK08668 299 LIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPF 368
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-102 |
1.75e-12 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 63.70 E-value: 1.75e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 1 MLKYLLMMIFLIPLCLLKNSWWL-----VHSLMFLFSFIFMVCVYSYCDLNMISYYFGVDFFSFILILLSFWICSLMIMA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100
....*....|....*....|....*....
gi 691192243 76 SVSI--NLSSYHSNFFVFMVLILLIMLYC 102
Cdd:pfam01059 81 SQKHlkSEPNNRQRTFIFLLILLQLFLIL 109
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
181-399 |
2.50e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 68.63 E-value: 2.50e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 181 FMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTI--SFLGLKFNYFWLSLGLLGGA 258
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 259 IVSMICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFR 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 691192243 339 LMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTLYMY 399
Cdd:PRK08676 366 LQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-370 |
9.41e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 63.83 E-value: 9.41e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 113 YIFFESSLVPTLILiLGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYFPLL------FDFGSYYFMFYVF 186
Cdd:PRK12665 137 YVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldeLPSGTRTALFAVL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 187 MIlAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRvMKTISFLGLKFNYFwlslgLLGGAIVSMI--- 263
Cdd:PRK12665 216 LV-AFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIR-THTLLFPGGGLDTL-----LMVVALLTMVvgi 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 264 --CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMP 341
Cdd:PRK12665 289 lgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASP 368
|
250 260
....*....|....*....|....*....
gi 691192243 342 MMALWWFLLSSSNMAAPPSLNLIGELSLL 370
Cdd:PRK12665 369 LLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
81-398 |
1.78e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.77 E-value: 1.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 81 LSSYHSN---FFVFMVLILLIMLyCSFSSLSLLSFYIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLPLLLV 157
Cdd:PRK12646 102 LSSRKDNlprFYFYLTLFMFSMI-GIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVG 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 158 LFKVYDFVNTLYFPLLFD-----FGSYYFMFYVFMIL--AFlVKMPMFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGgy 229
Cdd:PRK12646 181 FIMLYIMTGTNNITEILGqadhiKNHGLFIPMIFMFLlgAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAG-- 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 230 gIFRVMKTISFLGLKFNYFWL--SLGLLGGAIVSMICFRQVDLKSLIAYSSVAH----MSMV-IGGLMTMNWWGCVGSLS 302
Cdd:PRK12646 257 -IFLLFRFTPLLGLSNMYIYIvtFVGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIASIY 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 303 LMV---------GHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALwWFLLSSSNMAAPPSLN--LIGELSL-- 369
Cdd:PRK12646 336 VFVlfaalfhlmNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgfLSKEMFLda 414
|
330 340 350
....*....|....*....|....*....|....*.
gi 691192243 370 LNSIMSWSSFSFLVLIFL-------SFFSAVYTLYM 398
Cdd:PRK12646 415 LTQTGQLSQFSLISMIIIvfigviaSIFTFTYALYM 450
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
188-324 |
9.59e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 57.27 E-value: 9.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 188 ILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGLKFNYFWLSLGLLGgaivSMICFRQ 267
Cdd:PRK07234 191 ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLE 266
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 691192243 268 VDLKSLIAYSSVAHMSMVIGGlmtmnwwGCVGSLsLMVGHGLCSSGLFCLSNIIYER 324
Cdd:PRK07234 267 KDLKRMLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKSTLFLCAGALPSR 315
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
187-362 |
2.11e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 56.44 E-value: 2.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 187 MILAFL---VKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVmkTISFLG---LKFNYFWLSLGLLGGAIV 260
Cdd:PRK06521 213 FLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGapgWWWGVLVLALGAISAVLG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 261 SMICFRQVDLKSLIAYSSVAHMSMVIGGL-MTM----NWWGCVGSLSLMVG------HGLCSSGLFCLSNIIYERLGSRS 329
Cdd:PRK06521 291 VLYALAEHDLKRLLAYSTIENIGIIFVGLgLAMvfiaYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTRD 370
|
170 180 190
....*....|....*....|....*....|...
gi 691192243 330 LLINKGMINLMPMMAlWWFLLSSSNMAAPPSLN 362
Cdd:PRK06521 371 MEKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-359 |
1.17e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 54.00 E-value: 1.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 187 MILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTISFLGLKFNYFWL--SLGLLGGAIVSMIC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLviIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 265 FRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMA 344
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170
....*....|....*
gi 691192243 345 LWWFLLSSSNMAAPP 359
Cdd:PRK08377 372 LALTIGALSTVGIPL 386
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-398 |
3.47e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 52.41 E-value: 3.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 113 YIFFESSLVPTLILILGWGYQPERLQAGIYLIFYTLVASLPLLL---VLFKVYDFVNTLYFPLLFDFGSYYF--MFYVFM 187
Cdd:PRK08376 147 FVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLgiaLLYGQYGTLNMAYLAVKMSENPTVVakIALALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 188 ILAFLVKMPMFLFHLWLPKAHVEAPISGSMILagVLLKLGG-YGIFRVMKTIsfLGLKFNYFWLSLGLLGGAIVSMI--- 263
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSI--YGPAINLATVGWVIIILGCLTMFvgv 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 264 --CFRQVDLKSLIAYSSVAH---------MSMVIGGLMTMNWWGCV---GSLSLMVGHGLCSSGLFCLSNIIYERLGSRS 329
Cdd:PRK08376 303 amAVVQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYETGTRN 382
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 691192243 330 LLINKGMINLMPMMALwWFLLSSSNMAAPPSLN------LIGELS-LLNSIMSWSSFSFLVLIFLSFFSAVYTLYM 398
Cdd:PRK08376 383 LNELGGLARTMPKTTI-AFLIGAAAIVGLPPFNgfaskwLIYESSaLFNPILGVIAMIGSVLTLASFVKVFHTAFF 457
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-396 |
9.03e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 50.97 E-value: 9.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 59 FILILLSFWICSLM-IMASVSINLSSYHSNFFVFMVLILLIMLYcSFSSLSLLSFYIFFESSLVPTLILIlGWGYQPERL 137
Cdd:PRK06589 88 FLLLIGFLWICALLyTPKYLAINNIDSSSRFLFFFNLTILIGVL-IALSSDLFTMFVCYELLTISTAFLI-GHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 138 QAGI-YLIFYTLVASLPLLLVLFKVYDFVNTLYFPLLFDFGSYYFMFYVFMILAFLVKMPMFLFHLWLPKAHVEAPISGS 216
Cdd:PRK06589 166 SGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSA 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 217 MILAGVLLKLGGYGIFRVMKTISFLGLKFNYFWLSLGLLGGAIV-----SMICFRQVDLKSLIAYSSVAHMSMVIGGLMT 291
Cdd:PRK06589 246 LLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVsifysSLKALKTDNIKKILAYSTISQLSLALLSAFI 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 292 MNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLL- 370
Cdd:PRK06589 326 LTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILl 405
|
330 340 350
....*....|....*....|....*....|
gi 691192243 371 ----NSIMSWSSFSFLVLIFLSFFSAVYTL 396
Cdd:PRK06589 406 aaseQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
201-362 |
2.04e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 46.74 E-value: 2.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 201 HLWLPKAHVEAPISGSMILAGVLLKLGGYGIFrvmkTISFLGLKFNYFW----LSLGLLGGAIVSMICFRQVDLKSLIAY 276
Cdd:PRK08042 200 HGWVPQAHANASAPAAALFSTVVMKIGLLGIL----TLSLLGGNAPLWWgvalLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 277 SSVAHMSMVIGGL-----------MTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPMMAL 345
Cdd:PRK08042 276 HTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISI 355
|
170
....*....|....*..
gi 691192243 346 wWFLLSSSNMAAPPSLN 362
Cdd:PRK08042 356 -AMLVGLMAMAALPPLN 371
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
113-396 |
4.77e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 45.71 E-value: 4.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 113 YIFFESSLVPTLILILgWGYQPERLQAGIYLIFYTLVASLPLLLVLFKVYDFVNTLYFPLL------FDFGSYYFMFYVF 186
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 187 MILAFLVKMPMFLFHlWLPKAHVEAPISGSMILAGVLLKLGGYGIFRVMKTI----SFLGLKFNYFWLSLGLLGGAIVSM 262
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqeRELLHPLLATMAAITMVIGALGAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 263 IcfrQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPM 342
Cdd:PRK12663 292 A---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPL 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 691192243 343 MALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSFLVLIFLSFFSAVYTL 396
Cdd:PRK12663 369 FGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
185-374 |
6.89e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.42 E-value: 6.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 185 VFMILAFLVKMPMFLFHLWLPKAHVEA-PIS-----GSMILAGVLLKLGGYGIFRVMKTisflglkFNYFWLSLGLLGGA 258
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-------WNWLLIIVGMITAL 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 259 IVSMICFRQVDLKSLIAYSSVAHMsmviGGLMTMNWWGCVGSLSLMV----GHGLCSSGLFCLSNIIYERLGSRSLLINK 334
Cdd:PRK12650 285 MGAVFAVQKTDLKKLTAYSTVSQL----GWIVATIGVGTPFALTAAVvhtlAHALFKSSLFMLIGVVDHQAGTRDIRRLG 360
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 691192243 335 GMINLMPmMALWWFLLSSSNMAA-PPSLNLIGELSLLNSIM 374
Cdd:PRK12650 361 SLWRRMP-FTFVSVTIAALSMAAvPPLFGFVSKEGMLTAFL 400
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
185-315 |
3.48e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 42.89 E-value: 3.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 185 VFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLlKLGGYGIF-RVMKTIsFLGLkfnYFWLSLGLLGGAIVSMI 263
Cdd:PRK05777 208 VFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLlRLLVVA-FGGL---SEDWQQVLAIIAIASML 282
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 691192243 264 -----CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLF 315
Cdd:PRK05777 283 vgnlaALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
185-345 |
6.45e-04 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 42.03 E-value: 6.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 185 VFMILAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLlKLGGYGIF-RVMkTISFLGLKFNYFWLsLGLLggAIVSMI 263
Cdd:COG1007 207 VLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAALlRLL-VEAFPGLAADWQLL-LAVL--AVLSMT 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 264 C-----FRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCVGSLSLMVGHGLCSSGLF-CLSNIIYERLGSRSLLINKGMI 337
Cdd:COG1007 282 VgnlaaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLA 361
|
....*...
gi 691192243 338 NLMPMMAL 345
Cdd:COG1007 362 RRSPLLAL 369
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
184-359 |
7.06e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 41.88 E-value: 7.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 184 YVFMILAFLVKMPMFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRVMKTISFLGLKFNYFWLSLGLLGGAIVSM 262
Cdd:PRK06525 210 FLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 263 ICFRQVDLKSLIAYSSVAHMSMVIGGLMTM---NWWGCVGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINL 339
Cdd:PRK06525 289 MYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKK 368
|
170 180
....*....|....*....|
gi 691192243 340 MPMMALWWFLLSSSNMAAPP 359
Cdd:PRK06525 369 LPLVGVGFCVAALAITGVPP 388
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
183-393 |
5.38e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 39.13 E-value: 5.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 183 FYVFMILAFLV----KMPMFLFHLWLPKAhVEAPI-------SGSMILAGVLLklggygifrVMKTISFLGLKFNYFWLs 251
Cdd:PRK12647 193 LYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYL---------LARLNPVLGGTPLWQTI- 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 691192243 252 LGLLGGaiVSMIC-----FRQVDLKSLIAYSSVahmsMVIGGLMTMNWWGCVGSLS----LMVGHGLCSSGLFCLSNIIY 322
Cdd:PRK12647 262 LPLFGG--LTMLTgallaVRQTDLKLILAYSTV----SALGTLVMLLGLGSELAIKaavlFLVAHSLYKGALFMVAGIID 335
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 691192243 323 ERLGSRSLLINKGMINLMPMMALWWFLLSSSNMAAPPSLNLIGELSLLNSIMSWSSFSfLVLIFLSFFSAV 393
Cdd:PRK12647 336 HETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWS-LILTVAAVLGNA 405
|
|
| |
