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Conserved domains on  [gi|685669142|gb|AIO56266|]
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FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein [Burkholderia mallei]

Protein Classification

LLM class flavin-dependent oxidoreductase( domain architecture ID 10023993)

LLM (luciferase-like monooxygenase) class flavin-dependent oxidoreductase transfers one oxygen atom of an oxygen molecule to a substrate while reducing the other oxygen atom to water

CATH:  3.20.20.30
EC:  1.-.-.-
Gene Ontology:  GO:0010181|GO:0016491
PubMed:  24361254|33460580
SCOP:  3000585

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
FMN_nitrolo TIGR03860
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; This model represents a ...
8-424 0e+00

FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity]


:

Pssm-ID: 274819 [Multi-domain]  Cd Length: 422  Bit Score: 611.43  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142    8 FGIMLQGAGSHMNAWRHPSNPPDASVNLDFIVRIARQAEANGIAFAFVADGLYI-----NEKSIPHFLNRFEPISLLSAL 82
Cdd:TIGR03860   1 LGAFLNGVGHHPGLWRHPRARADAYLDLDYWTELARTAERGKFDALFFADVLGVydvpdAALRRAAQLPRFEPLTLLSAL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142   83 ATATSRIGLAGTVSTSYSEPFTVARQFASLDLLSGGRAGWNVVTTPLEGTAKNYG-TRHPEHDLRYEIADEYLSVAQGLW 161
Cdd:TIGR03860  81 AAVTEHIGLGATASTTYEEPYNLARRFASLDHLSGGRAGWNIVTSYLDSAARNFGlDEHPPHDERYERAEEFVDVVYKLW 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  162 DSWDDDAFVRDRASGRFFDRDKLHALDHAGRFFEVAGPLNIQRSPQGQPVIFQAGSSDAGIALAGKYADAVFTHAPSLDE 241
Cdd:TIGR03860 161 DSWEDDAFVRDKASGVFADPAKVHPINHKGKHFSVRGPLNIPRSPQGTPVLFQAGSSERGREFAARHAEAVFTAQPTLED 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  242 TRVFARRVKDSAIAHGRRADDVKIFPGIGPIVGRTAAEAEEKYRAIRELLTIDEALAYLGRYFDhHDFTQYPLDAPFPEL 321
Cdd:TIGR03860 241 AQAFYADIKARAAAAGRDPDDVKILPGITPIVGRTEAEARAKYAELQDLISPEGGLALLSGWTG-IDLSQYDLDAPLPDL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  322 GDVGRNsfRSTTDRIKAEARAKGLTLRETALAVATPR--PQFIGAAHDVADALIRWIDAGAGDGFILGFAVQAQGLDDFV 399
Cdd:TIGR03860 320 PTEAGQ--KSRFDLILELARRENLTLRQLALRLAGGRghPVFVGTPEQVADQLEEWFEEGAADGFNLMPPVLPGGLEDFV 397
                         410       420
                  ....*....|....*....|....*
gi 685669142  400 ELVIPALEARGRYRRTLVGSTLRDH 424
Cdd:TIGR03860 398 DLVVPELQRRGLFRTEYEGGTLREH 422
 
Name Accession Description Interval E-value
FMN_nitrolo TIGR03860
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; This model represents a ...
8-424 0e+00

FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 274819 [Multi-domain]  Cd Length: 422  Bit Score: 611.43  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142    8 FGIMLQGAGSHMNAWRHPSNPPDASVNLDFIVRIARQAEANGIAFAFVADGLYI-----NEKSIPHFLNRFEPISLLSAL 82
Cdd:TIGR03860   1 LGAFLNGVGHHPGLWRHPRARADAYLDLDYWTELARTAERGKFDALFFADVLGVydvpdAALRRAAQLPRFEPLTLLSAL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142   83 ATATSRIGLAGTVSTSYSEPFTVARQFASLDLLSGGRAGWNVVTTPLEGTAKNYG-TRHPEHDLRYEIADEYLSVAQGLW 161
Cdd:TIGR03860  81 AAVTEHIGLGATASTTYEEPYNLARRFASLDHLSGGRAGWNIVTSYLDSAARNFGlDEHPPHDERYERAEEFVDVVYKLW 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  162 DSWDDDAFVRDRASGRFFDRDKLHALDHAGRFFEVAGPLNIQRSPQGQPVIFQAGSSDAGIALAGKYADAVFTHAPSLDE 241
Cdd:TIGR03860 161 DSWEDDAFVRDKASGVFADPAKVHPINHKGKHFSVRGPLNIPRSPQGTPVLFQAGSSERGREFAARHAEAVFTAQPTLED 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  242 TRVFARRVKDSAIAHGRRADDVKIFPGIGPIVGRTAAEAEEKYRAIRELLTIDEALAYLGRYFDhHDFTQYPLDAPFPEL 321
Cdd:TIGR03860 241 AQAFYADIKARAAAAGRDPDDVKILPGITPIVGRTEAEARAKYAELQDLISPEGGLALLSGWTG-IDLSQYDLDAPLPDL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  322 GDVGRNsfRSTTDRIKAEARAKGLTLRETALAVATPR--PQFIGAAHDVADALIRWIDAGAGDGFILGFAVQAQGLDDFV 399
Cdd:TIGR03860 320 PTEAGQ--KSRFDLILELARRENLTLRQLALRLAGGRghPVFVGTPEQVADQLEEWFEEGAADGFNLMPPVLPGGLEDFV 397
                         410       420
                  ....*....|....*....|....*
gi 685669142  400 ELVIPALEARGRYRRTLVGSTLRDH 424
Cdd:TIGR03860 398 DLVVPELQRRGLFRTEYEGGTLREH 422
Nitrilotriacetate_monoxgenase cd01095
nitrilotriacetate monoxygenase oxidizes nitrilotriacetate utilizing reduced flavin ...
8-412 2.21e-144

nitrilotriacetate monoxygenase oxidizes nitrilotriacetate utilizing reduced flavin mononucleotide (FMNH2) and oxygen. The FMNH2 is provided by an NADH:flavin mononucleotide (FMN) oxidorductase that uses NADH to reduce FMN to FMNH2.


Pssm-ID: 238528 [Multi-domain]  Cd Length: 358  Bit Score: 415.95  E-value: 2.21e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142   8 FGIMLQGAGSHMNAWRHPsNPPDASVNLDFIVRIARQAEANGIAFAFVADGLYINEKSIPHFLNRFEPISLLSALATATS 87
Cdd:cd01095    3 LGAFLHGAGHHAAAWRHP-APPDASIDFDHYVRLARTAERAKFDAVFLADGLAIRALSRPHPVARLEPLTLLAALAAVTE 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  88 RIGLAGTVSTSYSEPFTVARQFASLDLLSGGRAGWNVVTTPLEGTAKNYG-TRHPEHDLRYEIADEYLSVAQGLWDSWDD 166
Cdd:cd01095   82 RIGLVATASTTYNEPYHLARRFASLDHISGGRAGWNVVTSANPGEARNFGrDEHPEHDERYARAEEFVEVVKGLWDSWED 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 167 DAFVRDRASGRFFDRDKLHALDHAGRFFEVAGPLNIQRSPQGQPVIFQAGSSDAGIALAGKYADAVFTHAPSLDETRVFA 246
Cdd:cd01095  162 DALVRDKASGRFADPAKVHPLDHVGDHFGVRGPLNGPRSPQGRPVIVQAGSSEAGREFAARHAEAVFTAQQTLEEAQAFY 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 247 RRVKDSAIAHGRRADDVKIFPGIGPIVGRTAAEAEEKYRAIRELLtidealaylgryfdhhdftqypldapfpelgdVGR 326
Cdd:cd01095  242 ADVKARAAAAGRLDPPPPDLPDLGSRLSASRLLLADLLARGGLHR--------------------------------REV 289
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 327 NSFRSTTDRIKAEARAKGLTLRETalavatprpqfigaahdVADALIRWIDAGAGDGFILGFAVQAQGLDDFVELVIPAL 406
Cdd:cd01095  290 GTAREVADRLERAAGGGTVVGPEQ-----------------IADELEEWFEAGAADGFNIMPPYLPGGLDDFVDLVVPEL 352

                 ....*.
gi 685669142 407 EARGRY 412
Cdd:cd01095  353 QRRGLF 358
SsuD COG2141
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ...
45-408 4.92e-64

Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) [Coenzyme transport and metabolism, General function prediction only]; Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) is part of the Pathway/BioSystem: Pyrimidine degradation


Pssm-ID: 441744 [Multi-domain]  Cd Length: 301  Bit Score: 208.25  E-value: 4.92e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  45 AEANGIAFAFVADGLYineksiPHFLNRFEPISLLSALATATSRIGL-AGTVSTSYSEPFTVARQFASLDLLSGGRAGWN 123
Cdd:COG2141    1 AERLGFDRVWVADHHF------PPGGASPDPWVLLAALAAATSRIRLgTGVVVLPLRHPLVVAEQFATLDHLSGGRLDLG 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 124 VVTTPLEGTAKNYGTRHPEhdlRYEIADEYLSVAQGLWDSwdddafvrdrasgrffdrdklHALDHAGRFFEVAGPLNIQ 203
Cdd:COG2141   75 VGRGWGPDEFAAFGLDHDE---RYERFEEALEVLRRLWTG---------------------EPVTFEGEFFTVEGARLVP 130
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 204 RSPQGQ-PVIFQAGSSDAGIALAGKYADAVFTHAPSLDETRVFARRVKDSAIAHGRRADDVKIFPGIGPIVGRTAAEAEE 282
Cdd:COG2141  131 RPVQGPhPPIWIAGSSPAGARLAARLGDGVFTAGGTPEELAEAIAAYREAAAAAGRDPDDLRVSVGLHVIVAETDEEARE 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 283 KYRAirelltidealaylgryfdhhdftqypldapfpelgdvGRNSFRSTTDRIKAEARAKGLTLRETALAVAtpRPQFI 362
Cdd:COG2141  211 RARP--------------------------------------YLRALLALPRGRPPEEAEEGLTVREDLLELL--GAALV 250
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|.
gi 685669142 363 GAAHDVADALIRWIDAGAGDGFILGF-----AVQAQGLDDFVELVIPALEA 408
Cdd:COG2141  251 GTPEQVAERLEELAEAAGVDEFLLQFpgldpEDRLRSLELFAEEVLPLLRR 301
Bac_luciferase pfam00296
Luciferase-like monooxygenase;
22-380 4.92e-44

Luciferase-like monooxygenase;


Pssm-ID: 425589 [Multi-domain]  Cd Length: 313  Bit Score: 156.37  E-value: 4.92e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142   22 WRHPSNPPDASVNLDFIVRIARQAEANGIAFAFVADGLYINeksiphflNRFEPISLLSALATATSRIGLAGTVSTSYS- 100
Cdd:pfam00296   9 TRNGGGLGAGSESLRYLVELARAAEELGFDGVWLAEHHGGP--------GGPDPFVVLAALAAATSRIRLGTAVVPLPTr 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  101 EPFTVARQFASLDLLSGGRAGWNVVTTPLEGTAKNYGTRHPEhdlRYEIADEYLSVAQGLWDSwdddafvrdrasgrffd 180
Cdd:pfam00296  81 HPAVLAEQAATLDHLSGGRFDLGLGTGGPAVEFRRFGVDHDE---RYARLREFLEVLRRLWRG----------------- 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  181 rdklHALDHAGRFFEVAGPLNIQRSPQGQPVIFqAGSSDAGIALAGKYADAVFTHAPS-LDETRVFARRVKDSAIAHGRR 259
Cdd:pfam00296 141 ----EPVDFEGEFFTLDGAFLLPRPVQGIPVWV-AASSPAMLELAARHADGLLLWGFApPAAAAELIERVRAGAAEAGRD 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  260 ADDVKIFPGIGPIVGRTAAEAEEKYRAIrelltideaLAYLGRYFDHHDFTQYpldapfpeLGDVGRNSFRSTTDRIKAE 339
Cdd:pfam00296 216 PADIRVGASLTVIVADTEEEARAEARAL---------IAGLPFYRMDSEGAGR--------LAEAREIGEEYDAGDWAGA 278
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 685669142  340 ARAKGLTLRETALAVATPRpqfigaahDVADALIRWIDAGA 380
Cdd:pfam00296 279 ADAVPDELVRAFALVGTPE--------QVAERLAAYAEAGV 311
PRK00719 PRK00719
alkanesulfonate monooxygenase; Provisional
80-303 8.39e-10

alkanesulfonate monooxygenase; Provisional


Pssm-ID: 234821 [Multi-domain]  Cd Length: 378  Bit Score: 60.35  E-value: 8.39e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  80 SALATATSRIGLAGTVSTSYSEPFTVARQFASLDLLSGGRAGWNVVT----TPLEGTAknygtRHPEHDLRYEIADEYLS 155
Cdd:PRK00719  61 ASLIPVTQRLKFLVALRPGLMSPTVAARMAATLDRLSNGRLLINLVTggdpAELAGDG-----LFLDHDERYEASAEFLR 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 156 VaqglWdswdddafvRDRASGRffdrdklhALDHAGRFFEVAG------PLNiqrspQGQPVIFQAGSSDAGIALAGKYA 229
Cdd:PRK00719 136 I----W---------RRLLEGE--------TVDFEGKHIQVKGakllfpPVQ-----QPYPPLYFGGSSDAAQELAAEQV 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 230 DAVFT--HAPSLDETRVfaRRVKDSAIAHGRraddvKIFPGI--GPIVGRTAAEAeekYRAIRELL------TIDEALAY 299
Cdd:PRK00719 190 DLYLTwgEPPAQVKEKI--EQVRAKAAAHGR-----KVRFGIrlHVIVRETNEEA---WQAAERLIshlddeTIARAQAA 259

                 ....
gi 685669142 300 LGRY 303
Cdd:PRK00719 260 FARM 263
 
Name Accession Description Interval E-value
FMN_nitrolo TIGR03860
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; This model represents a ...
8-424 0e+00

FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 274819 [Multi-domain]  Cd Length: 422  Bit Score: 611.43  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142    8 FGIMLQGAGSHMNAWRHPSNPPDASVNLDFIVRIARQAEANGIAFAFVADGLYI-----NEKSIPHFLNRFEPISLLSAL 82
Cdd:TIGR03860   1 LGAFLNGVGHHPGLWRHPRARADAYLDLDYWTELARTAERGKFDALFFADVLGVydvpdAALRRAAQLPRFEPLTLLSAL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142   83 ATATSRIGLAGTVSTSYSEPFTVARQFASLDLLSGGRAGWNVVTTPLEGTAKNYG-TRHPEHDLRYEIADEYLSVAQGLW 161
Cdd:TIGR03860  81 AAVTEHIGLGATASTTYEEPYNLARRFASLDHLSGGRAGWNIVTSYLDSAARNFGlDEHPPHDERYERAEEFVDVVYKLW 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  162 DSWDDDAFVRDRASGRFFDRDKLHALDHAGRFFEVAGPLNIQRSPQGQPVIFQAGSSDAGIALAGKYADAVFTHAPSLDE 241
Cdd:TIGR03860 161 DSWEDDAFVRDKASGVFADPAKVHPINHKGKHFSVRGPLNIPRSPQGTPVLFQAGSSERGREFAARHAEAVFTAQPTLED 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  242 TRVFARRVKDSAIAHGRRADDVKIFPGIGPIVGRTAAEAEEKYRAIRELLTIDEALAYLGRYFDhHDFTQYPLDAPFPEL 321
Cdd:TIGR03860 241 AQAFYADIKARAAAAGRDPDDVKILPGITPIVGRTEAEARAKYAELQDLISPEGGLALLSGWTG-IDLSQYDLDAPLPDL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  322 GDVGRNsfRSTTDRIKAEARAKGLTLRETALAVATPR--PQFIGAAHDVADALIRWIDAGAGDGFILGFAVQAQGLDDFV 399
Cdd:TIGR03860 320 PTEAGQ--KSRFDLILELARRENLTLRQLALRLAGGRghPVFVGTPEQVADQLEEWFEEGAADGFNLMPPVLPGGLEDFV 397
                         410       420
                  ....*....|....*....|....*
gi 685669142  400 ELVIPALEARGRYRRTLVGSTLRDH 424
Cdd:TIGR03860 398 DLVVPELQRRGLFRTEYEGGTLREH 422
Nitrilotriacetate_monoxgenase cd01095
nitrilotriacetate monoxygenase oxidizes nitrilotriacetate utilizing reduced flavin ...
8-412 2.21e-144

nitrilotriacetate monoxygenase oxidizes nitrilotriacetate utilizing reduced flavin mononucleotide (FMNH2) and oxygen. The FMNH2 is provided by an NADH:flavin mononucleotide (FMN) oxidorductase that uses NADH to reduce FMN to FMNH2.


Pssm-ID: 238528 [Multi-domain]  Cd Length: 358  Bit Score: 415.95  E-value: 2.21e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142   8 FGIMLQGAGSHMNAWRHPsNPPDASVNLDFIVRIARQAEANGIAFAFVADGLYINEKSIPHFLNRFEPISLLSALATATS 87
Cdd:cd01095    3 LGAFLHGAGHHAAAWRHP-APPDASIDFDHYVRLARTAERAKFDAVFLADGLAIRALSRPHPVARLEPLTLLAALAAVTE 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  88 RIGLAGTVSTSYSEPFTVARQFASLDLLSGGRAGWNVVTTPLEGTAKNYG-TRHPEHDLRYEIADEYLSVAQGLWDSWDD 166
Cdd:cd01095   82 RIGLVATASTTYNEPYHLARRFASLDHISGGRAGWNVVTSANPGEARNFGrDEHPEHDERYARAEEFVEVVKGLWDSWED 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 167 DAFVRDRASGRFFDRDKLHALDHAGRFFEVAGPLNIQRSPQGQPVIFQAGSSDAGIALAGKYADAVFTHAPSLDETRVFA 246
Cdd:cd01095  162 DALVRDKASGRFADPAKVHPLDHVGDHFGVRGPLNGPRSPQGRPVIVQAGSSEAGREFAARHAEAVFTAQQTLEEAQAFY 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 247 RRVKDSAIAHGRRADDVKIFPGIGPIVGRTAAEAEEKYRAIRELLtidealaylgryfdhhdftqypldapfpelgdVGR 326
Cdd:cd01095  242 ADVKARAAAAGRLDPPPPDLPDLGSRLSASRLLLADLLARGGLHR--------------------------------REV 289
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 327 NSFRSTTDRIKAEARAKGLTLRETalavatprpqfigaahdVADALIRWIDAGAGDGFILGFAVQAQGLDDFVELVIPAL 406
Cdd:cd01095  290 GTAREVADRLERAAGGGTVVGPEQ-----------------IADELEEWFEAGAADGFNIMPPYLPGGLDDFVDLVVPEL 352

                 ....*.
gi 685669142 407 EARGRY 412
Cdd:cd01095  353 QRRGLF 358
SsuD COG2141
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ...
45-408 4.92e-64

Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) [Coenzyme transport and metabolism, General function prediction only]; Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) is part of the Pathway/BioSystem: Pyrimidine degradation


Pssm-ID: 441744 [Multi-domain]  Cd Length: 301  Bit Score: 208.25  E-value: 4.92e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  45 AEANGIAFAFVADGLYineksiPHFLNRFEPISLLSALATATSRIGL-AGTVSTSYSEPFTVARQFASLDLLSGGRAGWN 123
Cdd:COG2141    1 AERLGFDRVWVADHHF------PPGGASPDPWVLLAALAAATSRIRLgTGVVVLPLRHPLVVAEQFATLDHLSGGRLDLG 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 124 VVTTPLEGTAKNYGTRHPEhdlRYEIADEYLSVAQGLWDSwdddafvrdrasgrffdrdklHALDHAGRFFEVAGPLNIQ 203
Cdd:COG2141   75 VGRGWGPDEFAAFGLDHDE---RYERFEEALEVLRRLWTG---------------------EPVTFEGEFFTVEGARLVP 130
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 204 RSPQGQ-PVIFQAGSSDAGIALAGKYADAVFTHAPSLDETRVFARRVKDSAIAHGRRADDVKIFPGIGPIVGRTAAEAEE 282
Cdd:COG2141  131 RPVQGPhPPIWIAGSSPAGARLAARLGDGVFTAGGTPEELAEAIAAYREAAAAAGRDPDDLRVSVGLHVIVAETDEEARE 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 283 KYRAirelltidealaylgryfdhhdftqypldapfpelgdvGRNSFRSTTDRIKAEARAKGLTLRETALAVAtpRPQFI 362
Cdd:COG2141  211 RARP--------------------------------------YLRALLALPRGRPPEEAEEGLTVREDLLELL--GAALV 250
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|.
gi 685669142 363 GAAHDVADALIRWIDAGAGDGFILGF-----AVQAQGLDDFVELVIPALEA 408
Cdd:COG2141  251 GTPEQVAERLEELAEAAGVDEFLLQFpgldpEDRLRSLELFAEEVLPLLRR 301
Bac_luciferase pfam00296
Luciferase-like monooxygenase;
22-380 4.92e-44

Luciferase-like monooxygenase;


Pssm-ID: 425589 [Multi-domain]  Cd Length: 313  Bit Score: 156.37  E-value: 4.92e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142   22 WRHPSNPPDASVNLDFIVRIARQAEANGIAFAFVADGLYINeksiphflNRFEPISLLSALATATSRIGLAGTVSTSYS- 100
Cdd:pfam00296   9 TRNGGGLGAGSESLRYLVELARAAEELGFDGVWLAEHHGGP--------GGPDPFVVLAALAAATSRIRLGTAVVPLPTr 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  101 EPFTVARQFASLDLLSGGRAGWNVVTTPLEGTAKNYGTRHPEhdlRYEIADEYLSVAQGLWDSwdddafvrdrasgrffd 180
Cdd:pfam00296  81 HPAVLAEQAATLDHLSGGRFDLGLGTGGPAVEFRRFGVDHDE---RYARLREFLEVLRRLWRG----------------- 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  181 rdklHALDHAGRFFEVAGPLNIQRSPQGQPVIFqAGSSDAGIALAGKYADAVFTHAPS-LDETRVFARRVKDSAIAHGRR 259
Cdd:pfam00296 141 ----EPVDFEGEFFTLDGAFLLPRPVQGIPVWV-AASSPAMLELAARHADGLLLWGFApPAAAAELIERVRAGAAEAGRD 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  260 ADDVKIFPGIGPIVGRTAAEAEEKYRAIrelltideaLAYLGRYFDHHDFTQYpldapfpeLGDVGRNSFRSTTDRIKAE 339
Cdd:pfam00296 216 PADIRVGASLTVIVADTEEEARAEARAL---------IAGLPFYRMDSEGAGR--------LAEAREIGEEYDAGDWAGA 278
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 685669142  340 ARAKGLTLRETALAVATPRpqfigaahDVADALIRWIDAGA 380
Cdd:pfam00296 279 ADAVPDELVRAFALVGTPE--------QVAERLAAYAEAGV 311
Alkanesulfonate_monoxygenase cd01094
Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the ...
20-286 6.38e-36

Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite. Alkanesulfonate monoxygenase (SsuD) has an absolute requirement for reduced flavin mononucleotide (FMNH2), which is provided by the NADPH-dependent FMN oxidoreductase (SsuE).


Pssm-ID: 238527 [Multi-domain]  Cd Length: 244  Bit Score: 132.40  E-value: 6.38e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  20 NAWRHPSNPPDASVNLDFIVRIARQAEANGIAFAFvadglyineksIPHFLNRFEPISLLSALATATSRIGLAGTVSTSY 99
Cdd:cd01094   12 GGWSLSTPPRGRPWDFEYNRQIAQAAEELGFDGAL-----------SPTGSSGPDGWTVAAALAAATERLKFLVAIRPGL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 100 SEPFTVARQFASLDLLSGGRAGWNVVTTPLEGTAKNYGTrHPEHDLRYEIADEYLSVAQGLWDSwdDDAFvrdrasgrff 179
Cdd:cd01094   81 IAPTVAARQAATLDHISGGRLGLNVVTGGDPAELRMDGD-FLDHDERYARADEFLEVLRRLWTS--DEPF---------- 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 180 drdklhalDHAGRFF----EVAGPLNIQRSPqgqPVIFQAGSSDAGIALAGKYADAVFTHAPSLDETRVFARRVKDSAIA 255
Cdd:cd01094  148 --------DFEGKFYrfknAFLRPKPPQQPH---PPIYFGGSSEAAIEFAARHADVYFTWGEPPAQVAEAIARVRAAAAA 216
                        250       260       270
                 ....*....|....*....|....*....|.
gi 685669142 256 HGRradDVKIFPGIGPIVGRTAAEAEEKYRA 286
Cdd:cd01094  217 AGR---DVRFGIRLHVIVRDTEEEAWAYADR 244
PRK00719 PRK00719
alkanesulfonate monooxygenase; Provisional
80-303 8.39e-10

alkanesulfonate monooxygenase; Provisional


Pssm-ID: 234821 [Multi-domain]  Cd Length: 378  Bit Score: 60.35  E-value: 8.39e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  80 SALATATSRIGLAGTVSTSYSEPFTVARQFASLDLLSGGRAGWNVVT----TPLEGTAknygtRHPEHDLRYEIADEYLS 155
Cdd:PRK00719  61 ASLIPVTQRLKFLVALRPGLMSPTVAARMAATLDRLSNGRLLINLVTggdpAELAGDG-----LFLDHDERYEASAEFLR 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 156 VaqglWdswdddafvRDRASGRffdrdklhALDHAGRFFEVAG------PLNiqrspQGQPVIFQAGSSDAGIALAGKYA 229
Cdd:PRK00719 136 I----W---------RRLLEGE--------TVDFEGKHIQVKGakllfpPVQ-----QPYPPLYFGGSSDAAQELAAEQV 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142 230 DAVFT--HAPSLDETRVfaRRVKDSAIAHGRraddvKIFPGI--GPIVGRTAAEAeekYRAIRELL------TIDEALAY 299
Cdd:PRK00719 190 DLYLTwgEPPAQVKEKI--EQVRAKAAAHGR-----KVRFGIrlHVIVRETNEEA---WQAAERLIshlddeTIARAQAA 259

                 ....
gi 685669142 300 LGRY 303
Cdd:PRK00719 260 FARM 263
PRK02271 PRK02271
methylenetetrahydromethanopterin reductase; Provisional
38-120 9.20e-08

methylenetetrahydromethanopterin reductase; Provisional


Pssm-ID: 235022 [Multi-domain]  Cd Length: 325  Bit Score: 53.40  E-value: 9.20e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 685669142  38 IVRIARQAEANGIAFAFVADglyineksipHFLNRfEPISLLSALATATSRIGLAGTVSTSY-SEPFTVARQFASLDLLS 116
Cdd:PRK02271  16 IAYLAKLAEDNGFDYAWITD----------HYNNR-DVYMTLAAIAAATDTIKLGPGVTNPYtRHPAITASAIATLDEIS 84

                 ....
gi 685669142 117 GGRA 120
Cdd:PRK02271  85 GGRA 88
Flavin_utilizing_monoxygenases cd00347
Flavin-utilizing monoxygenases
212-258 6.44e-04

Flavin-utilizing monoxygenases


Pssm-ID: 238209 [Multi-domain]  Cd Length: 90  Bit Score: 38.50  E-value: 6.44e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 685669142 212 IFQAGSSDAGIALAGKYADAVFTHA-PSLDETRVFARRVKDSAIAHGR 258
Cdd:cd00347   43 IWFGGSSPPVAEQAGESGDGLLFAArEPPEEVAEALARYREAAAAAGR 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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