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homeobox protein HD1 [Brassica rapa]
KNOX2 and homeodomain domain-containing protein( domain architecture ID 11145408)
protein containing domains KNOX1, KNOX2, and homeodomain
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
Homeobox_KN | pfam05920 | Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to ... |
238-276 | 1.94e-18 | ||
Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to human and plants. They were first identified as TALE homeobox genes in eukaryotes, (including KNOX and MEIS genes). They have been recently classified. : Pssm-ID: 428673 Cd Length: 39 Bit Score: 76.79 E-value: 1.94e-18
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KNOX2 | pfam03791 | KNOX2 domain; The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a ... |
86-137 | 4.59e-16 | ||
KNOX2 domain; The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a role in suppressing target gene expression. KNOX2, essential for function, is thought to be necessary for homo-dimerization. : Pssm-ID: 427506 Cd Length: 48 Bit Score: 70.71 E-value: 4.59e-16
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KNOX1 | pfam03790 | KNOX1 domain; The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a ... |
31-69 | 3.26e-14 | ||
KNOX1 domain; The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a role in suppressing target gene expression. KNOX2, essential for function, is thought to be necessary for homo-dimerization. : Pssm-ID: 461051 Cd Length: 40 Bit Score: 65.39 E-value: 3.26e-14
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Name | Accession | Description | Interval | E-value | ||
Homeobox_KN | pfam05920 | Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to ... |
238-276 | 1.94e-18 | ||
Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to human and plants. They were first identified as TALE homeobox genes in eukaryotes, (including KNOX and MEIS genes). They have been recently classified. Pssm-ID: 428673 Cd Length: 39 Bit Score: 76.79 E-value: 1.94e-18
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KNOX2 | pfam03791 | KNOX2 domain; The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a ... |
86-137 | 4.59e-16 | ||
KNOX2 domain; The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a role in suppressing target gene expression. KNOX2, essential for function, is thought to be necessary for homo-dimerization. Pssm-ID: 427506 Cd Length: 48 Bit Score: 70.71 E-value: 4.59e-16
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KNOX1 | pfam03790 | KNOX1 domain; The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a ... |
31-69 | 3.26e-14 | ||
KNOX1 domain; The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a role in suppressing target gene expression. KNOX2, essential for function, is thought to be necessary for homo-dimerization. Pssm-ID: 461051 Cd Length: 40 Bit Score: 65.39 E-value: 3.26e-14
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
220-281 | 4.17e-11 | ||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. Pssm-ID: 238039 [Multi-domain] Cd Length: 59 Bit Score: 57.25 E-value: 4.17e-11
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HOX | smart00389 | Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
219-276 | 1.86e-10 | ||
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 55.33 E-value: 1.86e-10
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Name | Accession | Description | Interval | E-value | ||
Homeobox_KN | pfam05920 | Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to ... |
238-276 | 1.94e-18 | ||
Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to human and plants. They were first identified as TALE homeobox genes in eukaryotes, (including KNOX and MEIS genes). They have been recently classified. Pssm-ID: 428673 Cd Length: 39 Bit Score: 76.79 E-value: 1.94e-18
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KNOX2 | pfam03791 | KNOX2 domain; The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a ... |
86-137 | 4.59e-16 | ||
KNOX2 domain; The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a role in suppressing target gene expression. KNOX2, essential for function, is thought to be necessary for homo-dimerization. Pssm-ID: 427506 Cd Length: 48 Bit Score: 70.71 E-value: 4.59e-16
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KNOX1 | pfam03790 | KNOX1 domain; The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a ... |
31-69 | 3.26e-14 | ||
KNOX1 domain; The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a role in suppressing target gene expression. KNOX2, essential for function, is thought to be necessary for homo-dimerization. Pssm-ID: 461051 Cd Length: 40 Bit Score: 65.39 E-value: 3.26e-14
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
220-281 | 4.17e-11 | ||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. Pssm-ID: 238039 [Multi-domain] Cd Length: 59 Bit Score: 57.25 E-value: 4.17e-11
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HOX | smart00389 | Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
219-276 | 1.86e-10 | ||
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 55.33 E-value: 1.86e-10
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Blast search parameters | ||||
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