|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-318 |
1.52e-118 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 352.91 E-value: 1.52e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDI 80
Cdd:MTH00165 246 LLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDI 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 81 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNN 160
Cdd:MTH00165 326 RFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFN 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 161 FYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYVIVLPLYLSFLTLFVVIIGFYLGYFISDFDYFYGLFSLN 240
Cdd:MTH00165 406 LKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLK 485
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 674101025 241 FLSFVSFVGSMWFMPFLSTNYISYLPLKVGYDSSKSLDCGWGELLGGQGLYSFFMYMIDYIQSLYDYNFSVYLLTFIF 318
Cdd:MTH00165 486 NYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLL 563
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
1-318 |
1.36e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 249.56 E-value: 1.36e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDI 80
Cdd:MTH00209 242 LLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDI 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 81 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNN 160
Cdd:MTH00209 322 RMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNS 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 161 FYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYVIVLPLYLSFLTLFVVIIGFYLGYFISDfdyfYGLFSLN 240
Cdd:MTH00209 402 SKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLK----KNFFLIK 477
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 674101025 241 FLSFVSFVGSMWFMPFLSTNYISYLPLKVGYDSSKSLDCGWGELLGGQGLYSFFMYMIDYIQSLYDYNFSVYLLTFIF 318
Cdd:MTH00209 478 GYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMML 555
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-318 |
1.90e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 243.98 E-value: 1.90e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDI 80
Cdd:MTH00151 243 LLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDI 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 81 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNN 160
Cdd:MTH00151 323 RLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMK 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 161 FYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYVIVLPLYLSFLTLFVVIIGFYLGYFISDFDYFYGLFSLN 240
Cdd:MTH00151 403 SSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKL 482
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 674101025 241 flsfVSFVGSMWFMPFLSTNYISYLPLKVGYDSSKSLDCGWGELLGGQGLYSFFMYMIDYIQSLYDYNFSVYLLTFIF 318
Cdd:MTH00151 483 ----SFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILL 556
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-294 |
1.75e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 236.59 E-value: 1.75e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDI 80
Cdd:MTH00207 246 LLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDL 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 81 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNN 160
Cdd:MTH00207 326 RTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNS 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 161 FYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYVIVLPLYLSFLTLFVVIIGFYLGYFISDFDYFYGLFSLN 240
Cdd:MTH00207 406 SSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLIN 485
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 674101025 241 FLSFVSFVGSMWFMPFLSTNYISYLPLKVGYDSSKSLDCGWGELLGGQGLYSFF 294
Cdd:MTH00207 486 NPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMF 539
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-318 |
1.14e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 190.16 E-value: 1.14e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDI 80
Cdd:MTH00211 271 VLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDI 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 81 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNN 160
Cdd:MTH00211 351 RKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPR 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 161 FYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYVIV-LPLYLSFLTLFVVIIGFYLGyfisdFDYFYGLFSL 239
Cdd:MTH00211 431 FLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLLG-----LELVNLTHKQ 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 240 NFLSFVSFVGSMWFMPFLSTNYISYLPLKVG-YDSSKSLDCGWGELLGGQGLYSFFMYMIDYIQSLYDYNFSVYLLTFIF 318
Cdd:MTH00211 506 LKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGqTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLL 585
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
2-318 |
2.64e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 184.40 E-value: 2.64e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 2 LLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDIR 81
Cdd:MTH00208 304 LILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLR 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 82 FMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNNF 161
Cdd:MTH00208 384 KMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSF 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 162 YPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPyVIVLPLYLSFLTLFVVIIGFYLGYFISdfdYFYGLFSLNF 241
Cdd:MTH00208 464 SPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSFL---LSLSSNPINS 539
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 674101025 242 LSFVSFVGSMWFMPFLSTNYISYLPLKVGYDSSKSLDCGWGELLGGQGLYSFFMYMIDYIQSLYDYNFSVYLLTFIF 318
Cdd:MTH00208 540 NFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTL 616
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
2-163 |
8.05e-50 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 174.58 E-value: 8.05e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 2 LLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDIR 81
Cdd:MTH00004 277 LCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIR 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 82 FMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNNF 161
Cdd:MTH00004 357 KMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRT 436
|
..
gi 674101025 162 YP 163
Cdd:MTH00004 437 PP 438
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
2-318 |
7.48e-48 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 168.93 E-value: 7.48e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 2 LLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDIR 81
Cdd:MTH00066 275 LCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIR 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 82 FMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNNF 161
Cdd:MTH00066 355 KMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRS 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 162 YPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPV-PYVIVLPLYLSFLTLFVVIIGFYLGYFISDFDYFYGLFSLN 240
Cdd:MTH00066 435 LPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKM 514
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 674101025 241 FlsfvSFVGSMWFMPFLSTNYISYLPLKVGYD-SSKSLDCGWGELLGGQGLYSFFMYMIDYIQSLYDYNFSVYLLTFIF 318
Cdd:MTH00066 515 H----SFSNLLAFFPTIIHRLSPKTNLNSGQNiATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLI 589
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
2-223 |
8.19e-45 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 160.79 E-value: 8.19e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 2 LLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDIR 81
Cdd:MTH00108 278 LCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIR 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 82 FMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNNF 161
Cdd:MTH00108 358 KMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRF 437
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 674101025 162 YPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYV-IVLPLYLSFLTLFVVIIGFYL 223
Cdd:MTH00108 438 PPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPqMTMPLYLKLTALAVTILGFIL 500
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-227 |
1.61e-41 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 151.84 E-value: 1.61e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSdSQDI 80
Cdd:COG1009 278 VAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDI 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 81 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE-VICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDN 159
Cdd:COG1009 357 RKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKP 436
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 674101025 160 NFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWL---------IFPVPYVIVLPLYLSFLTLFVVIIGFYLGYFI 227
Cdd:COG1009 437 RPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYLL 513
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
2-155 |
6.31e-41 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 150.37 E-value: 6.31e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 2 LLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDIR 81
Cdd:MTH00137 283 LCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIR 362
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 674101025 82 FMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRL-FYYSM 155
Cdd:MTH00137 363 KMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVvFFVSM 437
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
3-227 |
3.05e-39 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 145.50 E-value: 3.05e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 3 LIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDIRF 82
Cdd:TIGR01974 282 IIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRK 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 83 MGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNNFY 162
Cdd:TIGR01974 362 MGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHE 441
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 674101025 163 PSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYVIV-----------LPLYLSFLTLFVVIIGFYLGYFI 227
Cdd:TIGR01974 442 ADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSPTAVAILGILLAYLL 517
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
3-305 |
1.34e-38 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 144.06 E-value: 1.34e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 3 LIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDIRF 82
Cdd:MTH00020 279 IVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRK 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 83 MGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNNFY 162
Cdd:MTH00020 359 MGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLK 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 163 PSYFFD--DKSYFISFGMIGLLFVAVFGGSFLSWLI-------FPVPYVIV--LPLYLSFL-TLFVVIIGFYLGYFISDF 230
Cdd:MTH00020 439 KAVFFHlhEGDWNLLLPLGILALGSIFVGYLAKEMIwsfqitlPPIVPLSIklLPVFLSLGgIGLVIILYFYSSKTFRVP 518
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 674101025 231 DYFYGLFSLNFLsfvsfvGSMWFMPFLSTNYISYLPLKVGYD-SSKSLDCGWGELLGGQGLYSFFMYMIDYIQSLY 305
Cdd:MTH00020 519 FSFIGRNSYTFL------GSAWQFNYILNYFLIKKIWKGGHLiSYRTIDKGVLELVGPKGISNFLIILTQGLSSLQ 588
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
4-227 |
7.55e-38 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 141.83 E-value: 7.55e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 4 IGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDIRFM 83
Cdd:PRK06590 287 VGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKM 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 84 GSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEViCLSWINFLIFFLYFISTGLTASYSFRLFYYSMIG---DNN 160
Cdd:PRK06590 367 GGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEA-AFANGHINLFVAGLVGAFLTAFYSFRLIFLVFHGkekEKI 445
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 674101025 161 FYPSyffdDKSYFISFGMIGLLFVAVFGG-----SFLSWLIFPVPYVIV-----LPLYLSFLTLFVVIIGFYLGYFI 227
Cdd:PRK06590 446 HHPH----ESPAVMTLPLIVLAVLSVFAGalivpPFLGVLPLTTELAHGeaehhLPVWVALLPLVVALAGIALAWLL 518
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
146-318 |
1.73e-37 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 131.90 E-value: 1.73e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 146 YSFRLFYYSMIGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPVPYVIVLPLYLSFLTLFVVIIGFYLGY 225
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 226 FISDFDYFYGLFSLNFlSFVSFVGSMWFMPFLSTNYISYLPLKVGYDSSKSLDCGWGELLGGQGLYSFFMYMIDYIQSLY 305
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170
....*....|...
gi 674101025 306 DYNFSVYLLTFIF 318
Cdd:pfam06455 160 KGLIKIYLLSFLL 172
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
3-318 |
2.47e-37 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 140.53 E-value: 2.47e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 3 LIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDIRF 82
Cdd:MTH00210 280 ILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRK 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 83 MGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNNFY 162
Cdd:MTH00210 360 MGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSK 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 163 PSYFF--DDKSYFISFGMIGLLFVAVFGGS-----FLSWLIFPV--PYVIVLPLYLSFLTLFVVIIGFYLGYFIsDFDYF 233
Cdd:MTH00210 440 KEVFIgvHESSWNITFPLLLLAFGSIFVGYlgkevVLSNVIPPIvpNSIKMIPLLFSLLGALLAFVIYNSMVFL-IKISR 518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 234 YGLFSLNFLSFVSFVGSMWFMPFLSTNYISYLPLKVGYD-SSKSLDCGWGELLGGQGLYSFFMYMIDYIQSLYDYNFSVY 312
Cdd:MTH00210 519 RGVSIRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHLiTYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNY 598
|
....*.
gi 674101025 313 LLTFIF 318
Cdd:MTH00210 599 ALIMII 604
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
3-158 |
1.25e-27 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 112.81 E-value: 1.25e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 3 LIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSD------ 76
Cdd:PRK07376 296 WTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdp 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 77 --SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSwiNFLIFFLYFISTGLTASYSFRLFYYS 154
Cdd:PRK07376 376 vlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLT 453
|
....
gi 674101025 155 MIGD 158
Cdd:PRK07376 454 FEGE 457
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-139 |
2.65e-25 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 102.78 E-value: 2.65e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGY---YDLAFFHLLTHALFSALLFMCAGSMIHNLSDS 77
Cdd:pfam00361 150 LLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHT 229
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFIS 139
Cdd:pfam00361 230 RNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
3-176 |
3.18e-24 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 103.05 E-value: 3.18e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 3 LIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNL-------- 74
Cdd:CHL00025 296 LIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgysp 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 75 SDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDlilEVICLSWINFLIF-FLYFISTGLTASYSFRLFYY 153
Cdd:CHL00025 376 DKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKD---EILNDSWLYSPIFaIIAWSTAGLTAFYMFRIYLL 452
|
170 180
....*....|....*....|....*.
gi 674101025 154 SMIGD---NNFYPSYFFDDKSYFISF 176
Cdd:CHL00025 453 TFEGHlrvHFQNYSGKKNSSFYSISL 478
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
3-317 |
8.04e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 101.96 E-value: 8.04e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 3 LIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSM-GYYDLAFFHLLTHALFSALLFMCAGSMIHNLS-DSQDI 80
Cdd:MTH00032 294 IFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDM 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 81 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVI------------CLSWINFLI---------------- 132
Cdd:MTH00032 374 RKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTysgrnmgipfgsSLLKIQGDIgikkddrgsiggpegy 453
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 133 --------FFLYFISTGLTASYSFRLFYYSMIGDNNFYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIFPV----- 199
Cdd:MTH00032 454 psrgsafaFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTVLSLLCFGAIFVGYLIQDIligdi 533
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 200 ------PYVIVLPlylSFLTLFVVIIGFYLGYFISDFDYFYGLFSLN---FLSFVSFVGSMWFMPFLSTNYISYLPLKVG 270
Cdd:MTH00032 534 ehpivpPLIKVMP---TLMGLFGMGLCLWAQKGTREGELYWGFDPIGpsfLLSIYSFLGGAWQGDHLINKLVAIPLFSFG 610
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 674101025 271 -YDSSKSLDCGWGELLGGQGLYSFFMYMIDYIQSLYDYNFSVYLLTFI 317
Cdd:MTH00032 611 hWGIYKTLDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLL 658
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-153 |
6.24e-20 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 89.44 E-value: 6.24e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDL---AFFHLLTHALFSALLFMCAGSMIHNLsDS 77
Cdd:COG0651 275 LLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GT 353
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVIcLSWINFLIFFLYFISTGLTASYSFRLFYY 153
Cdd:COG0651 354 RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
1-318 |
5.52e-18 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 84.20 E-value: 5.52e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDI 80
Cdd:MTH00095 230 MLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDG 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 81 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNN 160
Cdd:MTH00095 310 RNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSK 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 161 FYPSYFFDDKSYFISFGMIgllfvaVFGGSFLSWLIFPVPYVIVLPLYLSFLTLFVVIIGFYLgyfISDFDYFYGLFSLN 240
Cdd:MTH00095 390 VVNVYSSSVLMNFLSLMLV------FFSVFFLWWLNFNLLNLPSLFLYLDFYVPLFYLFMIML---FSFFFFKLLFKELK 460
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 674101025 241 FLSFVSFVGSMWFMPFLSTNYISYLPLKVGYDssksldcgwgellgGQGLYSFFMYMIDYIQSLYDYNFSVYLLTFIF 318
Cdd:MTH00095 461 YKFFVDYFAKNVIYKLKNLKFFDLFLNKFGYK--------------GFNFFSSFSFFFFSYMKSFKYNSLLILLFLIF 524
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
1-150 |
1.45e-15 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 77.39 E-value: 1.45e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGC--LTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGY-YDL--AFFHLLTHALFSALLFMCAGSMIHNlS 75
Cdd:PRK12650 273 WLLIIVgmITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTpFALtaAVVHTLAHALFKSSLFMLIGVVDHQ-A 351
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 674101025 76 DSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTA----SYSFRL 150
Cdd:PRK12650 352 GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAvftfAYSARL 430
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-153 |
3.56e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 75.69 E-value: 3.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDL---AFFHLLTHALFSALLFMCAGSMIHNlSDS 77
Cdd:PRK08375 274 LAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVT-YGT 352
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK-DLILEVICLSWINFLIFFLyfISTGLTASYSFRLFYY 153
Cdd:PRK08375 353 RRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKwYLVVGAVEAGQWLVLAVLL--ASSLLALLYFLRIWYR 427
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
3-149 |
3.86e-15 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 76.00 E-value: 3.86e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 3 LIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGyYDLA----FFHLLTHALFSALLFMCAGSMIHNlSDSQ 78
Cdd:PRK12648 276 GAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTR 353
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 674101025 79 DIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDL----ILEVICLSWINFLIFFLYFISTGLTASYSFR 149
Cdd:PRK12648 354 DMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-152 |
8.56e-15 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 74.96 E-value: 8.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHL---LTHALFSALLFMCAGSMIHNlSDS 77
Cdd:PRK12644 270 VLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS-TGT 348
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVI----CLSWINFLIFFLYFISTGLTASYSFRLFY 152
Cdd:PRK12644 349 RDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
3-157 |
6.00e-14 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 72.27 E-value: 6.00e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 3 LIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMG------------YYDLAF----FHLLTHALFSALLFMC 66
Cdd:PRK12645 279 LVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGaaslhyqgddskIYAAAItaaiFHLINHATFKGSLFMI 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 67 AGSMIHNlSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE---------VICLSWINFLIFFLYF 137
Cdd:PRK12645 359 VGIVDHE-TGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAW 437
|
170 180
....*....|....*....|
gi 674101025 138 ISTGLTASYSFRLFYYSMIG 157
Cdd:PRK12645 438 VASVFTFVYSIIFIFKTFFG 457
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
4-121 |
7.87e-14 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 72.17 E-value: 7.87e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 4 IGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYD-------LAFFHLLTHALFSALLFMCAGSMIHNLSd 76
Cdd:PRK12649 284 TGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAA- 362
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 674101025 77 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 121
Cdd:PRK12649 363 TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
4-121 |
1.05e-13 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 71.71 E-value: 1.05e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 4 IGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMG-------------YYDL----AFFHLLTHALFSALLFMC 66
Cdd:PRK12646 280 VGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasIYVFvlfaALFHLMNHAIFKCALFMG 359
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 674101025 67 AGSMIHNlSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 121
Cdd:PRK12646 360 VGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLD 413
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-121 |
7.11e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 69.18 E-value: 7.11e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDL---AFFHLLTHALFSALLFMCAGSMIHNlSDS 77
Cdd:PRK12647 262 LPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHE-TGT 340
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 121
Cdd:PRK12647 341 RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYE 384
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-152 |
1.44e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 68.07 E-value: 1.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGY---YDLAFFHLLTHALFSALLFMCAGSMIHNlSDS 77
Cdd:PRK12667 298 LIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHA-AGT 376
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLyFISTGLTASYSFRLFY 152
Cdd:PRK12667 377 RDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAISLVGYFRAWY 450
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
1-115 |
3.62e-12 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 66.86 E-value: 3.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNlSDSQDI 80
Cdd:PRK07390 287 LIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDL 365
|
90 100 110
....*....|....*....|....*....|....*
gi 674101025 81 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYS 115
Cdd:PRK07390 366 TELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
1-150 |
1.52e-10 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 61.71 E-value: 1.52e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGY---YDLAFFHLLTHALFSALLFMCAGSMIHNLSDS 77
Cdd:PRK08377 276 VIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITLGGT 355
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 674101025 78 QDIRFMGSIVNfMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILeVICLSWINFLIFFLYFISTGLTASYSFRL 150
Cdd:PRK08377 356 EIEKFEGLGKR-MPLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
1-121 |
4.38e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 60.51 E-value: 4.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMM--------------SILSMGYYDLAFFHLLTHALFSALLFMC 66
Cdd:PRK08667 273 ILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILmgiglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLT 352
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 674101025 67 AGSMIHNLSDsQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 121
Cdd:PRK08667 353 AGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
1-152 |
1.30e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.85 E-value: 1.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGY---YDLAFFHLLTHALFSALLFMCAGSMIHNLSDS 77
Cdd:PRK08668 275 LAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTslgFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTT 354
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 674101025 78 QdIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVIcLSWINFLIFFLYFISTGLTASYSFRLFY 152
Cdd:PRK08668 355 K-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL-ISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-157 |
2.89e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 57.80 E-value: 2.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDL---------------AFFHLLTHALFSALLFM 65
Cdd:PRK08376 290 IIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFL 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 66 CAGSMIHNLSdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLswINFLIFFLYFISTGLTAS 145
Cdd:PRK08376 370 TAGAVIYETG-TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLA 446
|
170
....*....|..
gi 674101025 146 YSFRLFYYSMIG 157
Cdd:PRK08376 447 SFVKVFHTAFFG 458
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
10-120 |
5.61e-09 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 57.21 E-value: 5.61e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 10 LMAGFGANF---EFDLSSIIALSTLSQLGLMMSILSMGY---YDLAFFHLLTHALFSALLFMCAGSMIHNLSDSqDIRFM 83
Cdd:PRK12668 249 AMAVYGVFFallENDLRRLLSYHIVSQVGYMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYRTGTE-KLTEL 327
|
90 100 110
....*....|....*....|....*....|....*..
gi 674101025 84 GSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 120
Cdd:PRK12668 328 GGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-121 |
6.76e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 56.50 E-value: 6.76e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 3 LIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGyydlAFFHLlTHALFSALLFMCAGSmIHNLSDSQDIRF 82
Cdd:PRK07234 250 IFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAGA-LPSRNFTELISQ 323
|
90 100 110
....*....|....*....|....*....|....*....
gi 674101025 83 MGSIVNFMPLTsvcfnVSSLSLCGMPFLAGFYSKDLILE 121
Cdd:PRK07234 324 MLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLTLK 357
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
49-126 |
7.81e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 56.82 E-value: 7.81e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 674101025 49 AFFHLLTHALFSALLFMCAGSMIHNLSdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLS 126
Cdd:PRK06521 341 ALYHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-186 |
1.32e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 55.98 E-value: 1.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMM---SILSMGYYDLAFFHLLTHALFSALLFMCAGSmIHNLSDS 77
Cdd:PRK06589 283 LIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsaFILTPKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKE 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFIstgLTASYSFRLFYYSMIG 157
Cdd:PRK06589 362 DQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLV---VIASSILSALYLLKIL 438
|
170 180
....*....|....*....|....*....
gi 674101025 158 DNNFYPSYffdDKSYFISFGMIGLLFVAV 186
Cdd:PRK06589 439 SSIYKPSL---SENSFITKSLPYLMQISV 464
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
1-113 |
6.40e-08 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 53.68 E-value: 6.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLA--------------FFHLLTHALFSALLFMC 66
Cdd:PRK08042 248 LLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLG 327
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 674101025 67 AGSMIHNlSDSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGF 113
Cdd:PRK08042 328 AGSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
7-229 |
6.71e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 53.73 E-value: 6.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 7 LTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDIRFMGSI 86
Cdd:MTH00063 229 LTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 87 VNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGDNNFYPSYF 166
Cdd:MTH00063 309 ILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLILFGVKSSLSSGVR 388
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 674101025 167 FDdksYFISFGMigllfvaVFGGSFLSWLIFP-VPYVIVLPLYLSFLTLFVVIIGFYLGYFISD 229
Cdd:MTH00063 389 FL---FFNSGLM-------VFLWLFINYYVFLlLDEVVYLGVFISLVLLLVQLLGLLVGVLFYD 442
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-157 |
7.09e-08 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 53.55 E-value: 7.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLM-MSILSMGYYDL--AFFHLLTHALFSALLFMCAGsMIHNLSDS 77
Cdd:COG1008 278 LAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLqgAVLQMVSHGLITAALFLLVG-VLYDRTHT 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILevICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIG 157
Cdd:COG1008 357 RDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL--LGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFG 434
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
1-120 |
9.39e-08 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 53.05 E-value: 9.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYY------DLAFFHLLTHALFSALLFMCAGSMIHNL 74
Cdd:PRK06525 275 GAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC 354
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 674101025 75 SdSQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 120
Cdd:PRK06525 355 G-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-163 |
2.52e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 51.87 E-value: 2.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDL---AFFHLLTHALFSALLFMCAGSMIHnLSDS 77
Cdd:PRK07691 278 ILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGT 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEViCLSWINFLIFFLYFISTGLTASYSFRLFYYSMIG 157
Cdd:PRK07691 357 TDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEG-TFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
....*.
gi 674101025 158 DNNFYP 163
Cdd:PRK07691 436 EPKGYD 441
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
21-158 |
1.55e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 49.43 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 21 DLSSIIALSTLSQLG-LMMSILSMGYYDL--AFFHLLTHALFSALLFMCAGSMIHNLSdSQDIRFMGSIVNFMPLTSVCF 97
Cdd:PRK05846 300 DIKKLIAYSSISHMGfVTLGIFAGNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFF 378
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 674101025 98 NVSSLSLCGMPFLAGFYSKDLILevICLSWINFLIFFLYFISTGLTASYSFRLFYYSMIGD 158
Cdd:PRK05846 379 LFFAMASLGLPGTSGFVGEFLIL--LGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGP 437
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
1-69 |
6.63e-06 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 47.39 E-value: 6.63e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGS 69
Cdd:PRK08168 266 LVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASE 334
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
1-120 |
5.72e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.56 E-value: 5.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDL---AFFHLLTHALFSALLFMCAGSMIHnLSDS 77
Cdd:PRK12663 275 LATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGY 353
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 120
Cdd:PRK12663 354 RSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-121 |
7.44e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 44.19 E-value: 7.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGY---YDLAFFHLLTHALFSALLFMCAGsMIHNLSDS 77
Cdd:PRK12665 276 LMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAGS 354
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 121
Cdd:PRK12665 355 SSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-133 |
3.49e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 42.03 E-value: 3.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMG-YYDL--AFFHLLTHALFSALLFMCAGSMIHNLsDS 77
Cdd:PRK12662 282 FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNtYYGLaaAVAYIVNHSIVKSALFMVSGSISYHF-GT 360
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLS--WINFLIF 133
Cdd:PRK12662 361 TKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSnaWIGLVVL 418
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
29-69 |
1.76e-03 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 40.02 E-value: 1.76e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 674101025 29 STLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGS 69
Cdd:PRK08601 297 STMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGS 337
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
1-120 |
1.90e-03 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 39.91 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYyDLAFF----HLLTHALFSALLFMCAGSMIHNlSD 76
Cdd:PRK06458 284 LLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGG-PLGIFaallHMLNHSLTKSAIFFASGNVLQK-YG 361
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 674101025 77 SQDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL 120
Cdd:PRK06458 362 TRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
1-151 |
2.37e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 39.35 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAF---FHLLTHALFSALLFMCAGsMIHNLSDS 77
Cdd:PRK08676 276 LIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRS 354
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLIL-EVICLS-WINFLIFFLYFISTGLTASYSFRLF 151
Cdd:PRK08676 355 DRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILlQLGGISvWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-121 |
2.68e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 39.04 E-value: 2.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYyDLAFFHLLTHALFSALLFMcagsmIHNLSDSQDI 80
Cdd:MTH00112 154 LLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSP-KLTLLTFYIYILMTTPMFL-----TLNTTSTKTL 227
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 674101025 81 RFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILE 121
Cdd:MTH00112 228 KDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-197 |
4.47e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 38.56 E-value: 4.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGY-----YDLAFFHLLTHALFSALLFMCAGSMIhNLS 75
Cdd:PRK12664 204 LLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVI-NRT 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 76 DSQDIRFMGSIVNfMPLTSVCFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLYF--ISTGLTASYSFRLFYY 153
Cdd:PRK12664 283 RKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWY 361
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 674101025 154 SMIGDNNFYPSYffdDKSYFIS-FGMIGLLFVAVFGGSFLSWLIF 197
Cdd:PRK12664 362 AFISKSKSKPEA---EKVYIGSkLSMIILVLICVVLGMFNSYLLF 403
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
1-116 |
5.83e-03 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 38.17 E-value: 5.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLG-LMMSILSMGY--YDLAFFHLLTHALFSALLFMCAGSMIHNLSDS 77
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGyLLLGLAAGTPlgVSAALFYLLAYLFMNLGAFAVILLLSRKGGEA 351
|
90 100 110
....*....|....*....|....*....|....*....
gi 674101025 78 QDIRFMGSIVNFMPLTSVCFNVSSLSLCGMPFLAGFYSK 116
Cdd:COG1007 352 EEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGK 390
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-197 |
9.20e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 37.50 E-value: 9.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 1 LLLIGCLTMLMAGFGANFEFDLSSIIALSTLSQLGLMMSILSMGYYDLAFFHLLTHALFSALLFMCAGSMIHNLSDSQDI 80
Cdd:MTH00160 146 IIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNS 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 674101025 81 RFMGSIVNFMpltsvcFNVSSLSLCGMPFLAGFYSKDLILEVICLSWINFLIFFLyFISTGLTASYSFRLFYYSMIGdNN 160
Cdd:MTH00160 226 NNKSKKIKFL------LFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFIL-IMSSLITLYFYLRISYSSLML-NY 297
|
170 180 190
....*....|....*....|....*....|....*..
gi 674101025 161 FYPSYFFDDKSYFISFGMIGLLFVAVFGGSFLSWLIF 197
Cdd:MTH00160 298 NKNKWNLKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
|
|
|