|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-337 |
3.47e-172 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 481.61 E-value: 3.47e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 1 MSPFLSLTFFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWL 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 81 SGQWSIQHMTHPIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQIPIESPALYTTLGLVS 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPTNPTLLITLGLTS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 161 ILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIMTTPLFLTFQFMKTTTINSLSTSWAKTPILI 240
Cdd:MTH00135 161 TLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 241 SLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAMSMTMPPNNLPSSLPWRLNPSH 320
Cdd:MTH00135 241 ALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPSTQ 320
|
330
....*....|....*..
gi 667794792 321 IPLFLTILSIASVSLLP 337
Cdd:MTH00135 321 LTLPLAISTTATLMLLP 337
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-337 |
3.57e-129 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 372.72 E-value: 3.57e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 1 MSPFLSLTFFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWL 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 81 SGQWSIQHMTHPIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQI-PIESPALYTTLGLV 159
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQIsHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 160 SILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIMTTPLFLTFQFMKTTTINSLSTSWAKTPIL 239
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 240 ISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAMSMTMPPNNLPSSLPWRLNpS 319
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFK-N 319
|
330
....*....|....*...
gi 667794792 320 HIPLFLTILSIASVSLLP 337
Cdd:MTH00070 320 KTNNLLSLTIILSLMLLP 337
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-337 |
2.61e-126 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 365.30 E-value: 2.61e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 1 MSPFLSLTFFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWL 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 81 SGQWSIQHMTHPIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQI-PIESPALYTTLGLV 159
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTsNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 160 SILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIMTTPLFLTFQFMKTTTINSLSTSWAKTPIL 239
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 240 ISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAMSMTMPPNNLPSSLPWRLNPS 319
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330
....*....|....*...
gi 667794792 320 HIPLfLTILSIASVSLLP 337
Cdd:MTH00112 321 KNTL-TATLTTLSTLLLP 337
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-337 |
1.78e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 345.68 E-value: 1.78e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 1 MSPFLSLTFFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWL 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 81 SGQWSIQHMTHPIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQI-PIESPALYTTLGLV 159
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQIsPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 160 SILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIMTTPLFLTFQFMKTTTINSLSTSWAKTPIL 239
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 240 ISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAMSMTMPPNNLPSSLPWRLNPS 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330
....*....|....*...
gi 667794792 320 HIPLFLTILSIASVSLLP 337
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLP 338
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-337 |
1.83e-96 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 289.56 E-value: 1.83e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 1 MSPFLSLTFFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWL 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 81 SGQWSIQHMTHPIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQIPIES-PALYTTLGLV 159
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALnSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 160 SILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIMTTPLFLTFQFMKTTTINSLSTSWAKTPIL 239
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 240 ISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAMSMTMPPNNLPSSLPWRlNPS 319
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWR-TKS 319
|
330
....*....|....*...
gi 667794792 320 HIPLFLTILSIASVSLLP 337
Cdd:MTH00200 320 NSNLLVGLLLLLSILGLP 337
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
4.10e-92 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 278.35 E-value: 4.10e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 1 MSPFLSLTFFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWL 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 81 SGQWSIQHMTHPIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQI-PIESPALYTTLGLV 159
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIsNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 160 SILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIMTTPLFLTFQFMKTTTINSLSTSWAKTPIL 239
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 240 ISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAMSMTMPPNNLPSSLPWRLNPS 319
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*..
gi 667794792 320 HIPLFLTILSIASVSLL 336
Cdd:MTH00041 321 ITVYGVILSILSSISIL 337
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-337 |
2.41e-60 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 196.58 E-value: 2.41e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 1 MSPFLSLTFFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAwl 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNM-- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 81 sgqwSIQHMTHPIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQIPIESpaLYTTLGLVS 160
Cdd:MTH00160 80 ----LNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNN--FIIIIIILS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 161 ILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIMTTPLFLTFQFMKTTTINSLSTSWAKTPILI 240
Cdd:MTH00160 154 AIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 241 SLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAMSMTMPPNNLPSSLPWRLNPSH 320
Cdd:MTH00160 234 FLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFSL 313
|
330
....*....|....*..
gi 667794792 321 IPLFLTILSIASVSLLP 337
Cdd:MTH00160 314 ILNFLSFISLFGLILSS 330
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-319 |
2.62e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 178.16 E-value: 2.62e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 1 MSPFLSLtFFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWL 80
Cdd:MTH00144 2 SSPSNLL-FLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 81 SGQWSIqhmthpipLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQIpIESPALYTTLGLVS 160
Cdd:MTH00144 81 SFSWFS--------MSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNF-LDLYWLAYLLCVIS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 161 I---LVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIMTTPLFLTFQFMKTTTINSLSTSwAKTP 237
Cdd:MTH00144 152 VlsaLVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 238 ILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAMSMTMPPNNLPSSLPWRLN 317
Cdd:MTH00144 231 KTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNS 310
|
..
gi 667794792 318 PS 319
Cdd:MTH00144 311 SI 312
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-304 |
1.71e-52 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 176.12 E-value: 1.71e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 1 MSPFLSLtFFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSnawl 80
Cdd:MTH00011 4 TFPTMFL-FSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 81 sgQWSIQHMTHPIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPL-ILFLQIPIESPALYTTLGLV 159
Cdd:MTH00011 79 --MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLsILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 160 SILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIMTTPLFLTFQFMKTTTINSLSTSWAKTPIL 239
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 667794792 240 ISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAMSMTMP 304
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSP 301
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
9-337 |
1.79e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 149.82 E-value: 1.79e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 9 FFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWLSGQWSIQH 88
Cdd:MTH00197 3 FLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLSV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 89 MthpiplaMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQIPiESPALYTTLGLVSILVGGWGG 168
Cdd:MTH00197 83 V-------LVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNS-SSFMGLLICSVLSSLIGGIGG 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 169 RNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIMTTPLFLTFQFMKTTTINSLSTSWAKTPILISLAPLTLF 248
Cdd:MTH00197 155 MNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 249 SLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAmsmTMPPNNLPSSLPWRLNPSHIPLFLTIL 328
Cdd:MTH00197 235 SLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYK---SLILSNWMINFLMKINLLYSGLFILLM 311
|
....*....
gi 667794792 329 SIASVSLLP 337
Cdd:MTH00197 312 MMLPLLMIF 320
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
4-314 |
3.70e-31 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 122.15 E-value: 3.70e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 4 FLSLTFFSImiLGTLTVLSSSHWLVTWVGLEINTFAILPLMA-QNHHPRALEATLKYFIVQVTAAMMLLF---------A 73
Cdd:COG1007 104 FYALLLFAT--LGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 74 TMSNAWLSGQWSIQHMTHP---IPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQIPIESP 150
Cdd:COG1007 182 SLNLAGIAAALAAGGANSPlllLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAF 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 151 ALYTT--------LGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAF---LVFLM-YVIMTTPLFLTF 218
Cdd:COG1007 262 PGLAAdwqlllavLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaaLFYLLaYLFMNLGAFAVI 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 219 QFMK-----TTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYL 293
Cdd:COG1007 342 LLLSrkggeAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYL 421
|
330 340
....*....|....*....|.
gi 667794792 294 RLSYAMSMTMPPNNLPSSLPW 314
Cdd:COG1007 422 RVVKAMYFDEPEEEAPISAPP 442
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
14-295 |
2.06e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 115.90 E-value: 2.06e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 14 ILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHP-RALEATLKYFIVQVTAAMMLLFATMSNAWLSGQWSIQHM--- 89
Cdd:MTH00196 3 ALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYInlv 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 90 ----------THPIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQIPIESPALYTtLGLV 159
Cdd:MTH00196 83 lnsgqsfssvSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLI-GGLF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 160 SILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQ---FSSSLAFLVFL-MYVIMTTPLF---LTFQFMKTTTInSLSTS 232
Cdd:MTH00196 162 SLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEigsFESIQASLVYLfIYIIMSICVFsiiLALNVYKNLII-EFSGL 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 667794792 233 WAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRL 295
Cdd:MTH00196 241 SRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
12-295 |
4.45e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 116.27 E-value: 4.45e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 12 IMILGTLTVLSSSHWLVTWVGLEINTFAILPLMA-QNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWLSGQWSIQH-- 88
Cdd:MTH00199 105 IVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGin 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 89 --MTHPIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQIPIESPALYTTLGLvSILVGGW 166
Cdd:MTH00199 185 siLTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLICAVL-SIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 167 GGRNQTQLRKMLAYSSIAHLGWI---VLVMQFSSSLAFLVFLM-YVIMTTPLFLTFQFMKTTT--INSLSTSWAKTPILI 240
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFIlfgVAIGSFESIQASLIYMIiYVIMSICSFSIILSLKLTKglIVEVSGLSRKNPVIA 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 667794792 241 SLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRL 295
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
8-300 |
5.48e-28 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 112.93 E-value: 5.48e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 8 TFFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWLSGQWSIQ 87
Cdd:COG0651 111 PLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 88 HMTHPIP----------LAMIIIALALKMGLAPLHMWFPE-----------ILQGLSFNLGL--ILTTWQKLAPLILFLQ 144
Cdd:COG0651 191 DLAARLAeldpglllaaFALLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVyaILRVLTLLFGADPALF 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 145 IPIespaLYTTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVI----MTTPLFLT--- 217
Cdd:COG0651 271 LGT----LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLnhalAKALLFLAaga 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 218 -FQFMKTTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLS 296
Cdd:COG0651 347 iERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIF 426
|
....
gi 667794792 297 YAMS 300
Cdd:COG0651 427 GRAQ 430
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
4-316 |
2.60e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 111.45 E-value: 2.60e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 4 FLSLTFFsiMILGTLTVLSSSHWLVTWVGLEINTFAILPLMA-QNHHPRALEATLKYFIVQVTAAMMLL----------- 71
Cdd:PRK05777 105 FYLLVLF--ALLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatg 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 72 ---FATMSNAWLSGQwsIQHMTHPIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQIPIE 148
Cdd:PRK05777 183 slsFAGIAKALADGS--GNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVV 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 149 SPALYTT--------LGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVM----QFSSSLAFLVFLMYVIMTTPLFL 216
Cdd:PRK05777 261 AFGGLSEdwqqvlaiIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLaagtAEGYSAVLFYLLAYLFMTLGAFG 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 217 TFQFMK-----TTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFF 291
Cdd:PRK05777 341 VISLLRrkggeAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFY 420
|
330 340
....*....|....*....|....*
gi 667794792 292 YLRLSYAMSMTMPPNNLPSSLPWRL 316
Cdd:PRK05777 421 YLRVIKLMYFDEPPRDAPVNWPLSA 445
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
12-337 |
1.76e-25 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 106.19 E-value: 1.76e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 12 IMILGTLTVLSSSHWLVTWVGLEINTFAILPLMA-QNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWLSGQWSIQHMT 90
Cdd:TIGR01770 110 FALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLL 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 91 HP------------IPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQIPIESPALYTT--- 155
Cdd:TIGR01770 190 LFlsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEawq 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 156 -----LGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSL----AFLVFLMYVIMTTPLFLTFQFMKTT-- 224
Cdd:TIGR01770 270 iflaiIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLGAFGVLSLLRSYkd 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 225 ----TINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAMS 300
Cdd:TIGR01770 350 ewieYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVVKVMY 429
|
330 340 350
....*....|....*....|....*....|....*..
gi 667794792 301 MTMPPNNLPSslPWRLNPSHIPLFLTILSIASVSLLP 337
Cdd:TIGR01770 430 FDKPERRIPS--NPQSKAQSLLLSISALFILFLGLFP 464
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-266 |
2.56e-23 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 97.77 E-value: 2.56e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 23 SSHWLVTWVGLEINTFAILPLMAQNH-HPRALEATLKYFIVQVTAAMMLLFATMSNAWLSGQWSIQHMTHPIPLA----- 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGkSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 97 ------MIIIALALKMGLAPLHMWFPEILQGLSFNLGLILT-TWQKLAPLILFLQIPIESPA------LYTTLGLVSILV 163
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 164 GGWGGRNQTQLRKMLAYSSIAHLGWIVLVM----QFSSSLAFLVFLMYVIMTTPLFLTF-----QFMKTTTINSLSTSWA 234
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAgsviyRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|..
gi 667794792 235 KTPILISLAPLTLFSLGGLPPLTGFLPKWLIL 266
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLIL 272
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
8-298 |
6.23e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 81.58 E-value: 6.23e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 8 TFFSIMILGTLTVLSSSHWLVTWVGLEINTFAILpLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWLSGQWSI- 86
Cdd:PRK08668 102 MFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFa 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 87 ---QHMTHPIPLAMIIIALAL-------KMGLAPLHMWFPE-----------ILQGLSFNLGL--------ILTTWQKLA 137
Cdd:PRK08668 181 disQGLINDTSTGFALIVFLFllafgvaKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLGAygfllvlyVLPGTKLFS 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 138 PLILFLQIPIESPALyTTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVI----MTTP 213
Cdd:PRK08668 261 EFGTYRGVPLFNYIL-AWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFnhalFKGL 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 214 LFLTFQFM----KTTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSL 289
Cdd:PRK08668 340 FFLIFAAViyrtGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSF 419
|
....*....
gi 667794792 290 FFYLRLSYA 298
Cdd:PRK08668 420 LYVFRPLAG 428
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
44-299 |
1.41e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 80.40 E-value: 1.41e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 44 MAQNHHPRALEATLKYFIVQVTAAMMLLFA---------TMSNAWLS----GQWSIQHMT---HPIPLAMIIIALAL--- 104
Cdd:PRK12667 154 AYYRDRGDAVEAAIKYALIGAVGTTLYFLAlaflyatfgTLNMADLSakirGLSFPLTGGlagNPPLALGVALALALwaf 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 105 --KMGLAPLHMWFPE-----------ILQGLSFNLG---------LILTTWQKLAPLILFLQIPIespalyTTLGLVSIL 162
Cdd:PRK12667 234 tiKAAIFPNHFWLPDahpaapspvsaMLSGLVVNVGayaiirflyTIFGISPSLIDFRAALSPIL------IILGAVSAI 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 163 VGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYV----IMTTPLFLT----FQFMKTTTINSLSTSWA 234
Cdd:PRK12667 308 IGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIinhaIAKSLLFLAsgvfIHAAGTRDIDELAGLGR 387
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 667794792 235 KTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAM 299
Cdd:PRK12667 388 KMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSL 452
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
12-295 |
3.14e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 76.44 E-value: 3.14e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 12 IMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRAL---------EATLKYFIVQVTAAMMLLFA-------TM 75
Cdd:MTH00198 196 IVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGcalyfgfTG 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 76 SNAWLSGQWSIQHMTHPIPLA-------MIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQIPIE 148
Cdd:MTH00198 276 NEGMLGTILSATLETTNIELRqgslgylFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLVIT 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 149 SpALYTTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQF-------SSSLAFLVFLMYVIMTTPLFLTFQFM 221
Cdd:MTH00198 356 S-KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAgtyeslqASWTYAVTYLVSALASFTVICTLEEF 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 222 KTTTINSLST-------------------SWAKTPILISLApLTLFSLGGLPPLTGFLPKWLILDELTK---QNMLPVAV 279
Cdd:MTH00198 435 GTRTPTSRQRdgsfgnynlvrrlvdltilSRGQPYIAFSLA-IVFLSLAGIPPLLGFLGKWFILVGSIKiafSSSLSIYY 513
|
330 340
....*....|....*....|
gi 667794792 280 IAALSALL----SLFFYLRL 295
Cdd:MTH00198 514 LVALFAIIctciSAFYYIRI 533
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
31-306 |
7.44e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 72.22 E-value: 7.44e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 31 VGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFA---------TMSNAWLSGQWSIQHmTHPIPLAMIIIA 101
Cdd:PRK08375 133 VFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvgllygvtgTLNMADLAGALAENP-TVVTAFGFVLLA 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 102 LALKMGLAPLHMWFPE-----------ILQGLSFNLG------LILTTWQKLAPLILFLQIPIespalyTTLGLVSILVG 164
Cdd:PRK08375 212 LALKAAVFPLHTWLPRaypaappvvtaLLSGLVTKVAvyalirIYFTVFGGDFRFALGLGWLL------AVLALLSMLVG 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 165 GWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMY----VIMTTPLFLT----FQFMKTTTINSLSTSWAKT 236
Cdd:PRK08375 286 SLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHllhhALMKGALFLAagaiEVTYGTRRLSELSGLGRRM 365
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 237 PILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAMSMTMPPN 306
Cdd:PRK08375 366 PLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPP 435
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-313 |
1.73e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 70.88 E-value: 1.73e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 49 HPRALEATLKYFIVQVTAAMMLLFATMSNAWLSGQWS---IQHMTHPIPLAM-------IIIALALKMGLAPLHMWFPE- 117
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTfdiAELAAAPLPLTAqlllflaFFIAFAVKVPMFPFHTWLPDa 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 118 ----------ILQG----------LSFNLGLILTTWQKLAPLILflqipiespalytTLGLVSILVGGWGGRNQTQLRKM 177
Cdd:COG1008 236 hveaptagsvLLAGvllkmggyglLRFALPLFPEASAYFAPLLA-------------ALGVIGIIYGALVALAQTDLKRL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 178 LAYSSIAHLGWIVLVMQFSSSLAFL--VFLM--YVIMTTPLFL----TFQFMKTTTINSLSTSWAKTPILISLAPLTLFS 249
Cdd:COG1008 303 IAYSSVSHMGFVLLGIFALNPLGLQgaVLQMvsHGLITAALFLlvgvLYDRTHTRDIADLGGLAKRMPVLAALFLLAALA 382
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 667794792 250 LGGLPPLTGFLPKWLILDELTKQNMLpVAVIAALSALLSLFFYLRLsYAMSMTMPPNNLPSSLP 313
Cdd:COG1008 383 SLGLPGTSGFVGEFLVLLGAFQVNPW-LAILAALGLILTAAYLLWM-YQRVFFGPLKEELAELP 444
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-295 |
1.68e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 65.03 E-value: 1.68e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 51 RALEATLKYFIVQVTAAMMLLFATMSNAWLSGQ----WSIQH------MTHP----IPLAMIIIALALKMGLAPLHMWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGFSWLYGLSGGeielQEIVNglintqMYNSpgisIALIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 117 EILQGLSFNLGLILTTWQKLAPL--------ILFLQIPIESPALYTTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGW 188
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASalatrifdIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 189 IVLVM-------QFSSSLAFLVFLMYVIMTTPLFLTFQFMKTTT--INSLSTSWAKTPILISLAPLTLFSLGGLPPLTGF 259
Cdd:CHL00049 319 VIIGIivgdsndGYASMITYMLFYIFMNLGTFACIVLFGLRTGTdnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
250 260 270
....*....|....*....|....*....|....*.
gi 667794792 260 LPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRL 295
Cdd:CHL00049 399 FGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 434
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-304 |
1.99e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 61.65 E-value: 1.99e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 1 MSPFLSLTFfsIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMA-QNHHPRALEATLKYFIVQVTAAMMLLFATmsnAW 79
Cdd:PRK08376 120 LDKYYTLIL--LLELGMLGMAITGDLFNFFVFLEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---AL 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 80 LSGQWSIQHM-------------THPIPLAMIIIALALKMGLAPLHMWFPEILQGL--SFNLGLILTTWQKLAPL--ILF 142
Cdd:PRK08376 195 LYGQYGTLNMaylavkmsenptvVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAApsSISAMLLVIKQAGLYALarVLF 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 143 lqiPIESPALYTT--------LGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFS--------------SSLA 200
Cdd:PRK08376 275 ---SIYGPAINLAtvgwviiiLGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVGlaalgdpamasygeIALA 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 201 FLVF--LMYVIMTTPLFLT----FQFMKTTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNM 274
Cdd:PRK08376 352 GGIYhiVNHALYKALLFLTagavIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNP 431
|
330 340 350
....*....|....*....|....*....|
gi 667794792 275 LpVAVIAALSALLSLFFYLRLSYAMSMTMP 304
Cdd:PRK08376 432 I-LGVIAMIGSVLTLASFVKVFHTAFFGPP 460
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-262 |
6.35e-09 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 56.98 E-value: 6.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 50 PRALEATLKYFIVQVTAAMMLLFATMSNAWLSGQWSI-----------QHMTHPIPLAMIIIALALKMGLAPLHMWFPEI 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGSTQlsaialalitsPSLGLALALVFVIAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 119 LQGLSFNLGLILTTWQKLAPLILFLQIPI--------ESPALYTTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGW-- 188
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALAIRLLVtafpsfdeQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFvm 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 189 IVLVMQFSSSLAFLVFLM--YVIMTTPLF--LTFQFMKTTT--INSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPK 262
Cdd:PRK02504 317 IGLVAGTEAGYASMVFYLlaYLFMNLGAFacVILFSLRTGTdqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
9-337 |
1.27e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 56.09 E-value: 1.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 9 FFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFI---VQVTAAM---MLLFATMSNAWLSG 82
Cdd:PRK06458 113 MYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsVGVAFALfgtILVYANAATVMGDG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 83 QWSIQH---MTHPIPLAMIIIALAL---------KMGLAPLHMWFPE-----------ILQGLSFNLGLILttwqklapL 139
Cdd:PRK06458 193 EMAILWtelLKHASLLDPTLMKLAFvflligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYA--------V 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 140 ILFLQIPIESPA------LYTTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIM--- 210
Cdd:PRK06458 265 LRYYILIDAAIGsdfpgrLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsl 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 211 -TTPLFLT----FQFMKTTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSA 285
Cdd:PRK06458 345 tKSAIFFAsgnvLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLL 424
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 667794792 286 LLSLFFYLRLSYAMSMTMPPNNLPSSLPWRLNPSHIPLFLTILSIASVSLLP 337
Cdd:PRK06458 425 TLAFAALVRRVAGMVFGEPPEAVNRGDLGWLTTSPMFVHLVLVLVLGLYIPQ 476
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
55-288 |
2.13e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 55.33 E-value: 2.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 55 ATLKYFIVQVTAAMMLLFATMSNAWLSGqWSIQH---MTHPIPLAM-------IIIALALKMGLAPLHMWFPE------- 117
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILGLYFLGG-GTFDLlelLNLPLPFGVqtwlflaFFIAFAVKVPLFPLHTWLPDahveapt 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 118 ----ILQG----------LSFNLGLILTTWQKLAPLILFLqipiespalyttlGLVSILVGGWGGRNQTQLRKMLAYSSI 183
Cdd:TIGR01972 236 agsvILAGvllkmgtygfLRFNLPLFPDASLYFAPVLAAL-------------GVIAIIYGALIALAQTDIKRLIAYSSI 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 184 AHLGWIVLVMQFSSSLAFL--VFLMYV--IMTTPLFL----TFQFMKTTTINSLSTSWAKTPILISLAPLTLFSLGGLPP 255
Cdd:TIGR01972 303 SHMGFVLLGIFSFNELGISgaVFQMIShgLITAALFLlvgvLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPG 382
|
250 260 270
....*....|....*....|....*....|...
gi 667794792 256 LTGFLPKWLILDELTKQNmLPVAVIAALSALLS 288
Cdd:TIGR01972 383 TSGFVGEFLILLGSFKVN-PVVAFLAALGIVLA 414
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
290-337 |
6.94e-08 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 48.41 E-value: 6.94e-08
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 667794792 290 FFYLRLSYAMSMTMPPNNLPSSLPWRLNPSHIPLFLTILSIASVSLLP 337
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLP 48
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-270 |
1.88e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 52.26 E-value: 1.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 1 MSPFLSltFFSIMILGTL-TVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAW 79
Cdd:PRK07234 92 KTRFFY--AQLLILHGSVnAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 80 LSGQWSIQ--HMTHPIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLIL---TTWQKLAPLILFLQIPIESPALYT 154
Cdd:PRK07234 170 ANGTFAFSglATADPEAFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLsgvVVKAGVFPLVRCALDVPGLDLIVR 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 155 TLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLvmqfSSSLAFLVFLMYVIMTTPLFLTFQFMKTTTINSLSTSWA 234
Cdd:PRK07234 250 IFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILA----APLVGGLYALAHGLVKSTLFLCAGALPSRNFTELISQML 325
|
250 260 270
....*....|....*....|....*....|....*.
gi 667794792 235 KTPILISLApLTLFSLGGLPPLTGFLPKWLILDELT 270
Cdd:PRK07234 326 GIGKWIPLT-MASFSIAGFPLLAGFVSKVLTLKNLL 360
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-265 |
4.32e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 51.24 E-value: 4.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 55 ATLKYFIVQVTAAMMLLFATMSNAWLSGQWSIQH---MTHPIPLAM-------IIIALALKMGLAPLHMWFPE------- 117
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGASSFDYeplRSHTLPLSTqllllapILVGFGIKIPLVPFHTWLPDahveast 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 118 ----ILQG----------LSFNLGLILTTWQKLAPLIlflqipiespalyTTLGLVSILVGGWGGRNQTQLRKMLAYSSI 183
Cdd:PRK06473 238 pvsvLLAGvllklgtyglLRFGVGLFPEAWVYLAPWL-------------ATWAVVSVLYGASCAIAQKDMKKMVAYSSI 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 184 AHLGWIVLVMQFSSSLAFLVFLMYVI----MTTPLFLTFQ--FMKTTT-----INSLSTSWAKTPILISLAPLTLFSLGG 252
Cdd:PRK06473 305 GHMGYILLAAAAATPLSILAAVFQMIshglISALLFLLVGvvYKKTGSrdvdvLRGLLNPERGLPITGSLMILGVMASAG 384
|
250
....*....|...
gi 667794792 253 LPPLTGFLPKWLI 265
Cdd:PRK06473 385 IPGMVGFIAEFLV 397
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
154-282 |
6.55e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 51.07 E-value: 6.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 154 TTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIMTTpLFLTFQFMKTTTIN------ 227
Cdd:PRK12647 263 PLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHS-LYKGALFMVAGIIDhetgtr 341
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 667794792 228 ---SLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAA 282
Cdd:PRK12647 342 ditKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVA 399
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
154-295 |
6.91e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 50.92 E-value: 6.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 154 TTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLM-YVIMTTPLFLTF----QFMKTTTINS 228
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLtHAFFKALLFLGAgsviHATGTRDIRK 358
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 667794792 229 LSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLP--VAVIAALSALLSLFFYLRL 295
Cdd:COG1009 359 MGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGplLLAVALLGAFLTAFYSFRL 427
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-299 |
7.87e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 50.50 E-value: 7.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 9 FFSIMIL---GTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFA-----------T 74
Cdd:PRK12662 112 FYSAFLLclgGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyaitgtlN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 75 MSNAWLSGQWSIQHMTHPIPLAMIIIALALKMGLAPLHMWfpeILQGLSFNLGLILTTWQKLAPLIL------------- 141
Cdd:PRK12662 192 MGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKW---LIQAYSEAPSFISVFFSGTSTKVMiyliirivydvfk 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 142 ----FLQIPIESpaLYTTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVI----MTTP 213
Cdd:PRK12662 269 anfvFTTLPFNN--VFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsiVKSA 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 214 LFLTFQFMK----TTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSL 289
Cdd:PRK12662 347 LFMVSGSISyhfgTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSV 426
|
330
....*....|
gi 667794792 290 FFYLRLSYAM 299
Cdd:PRK12662 427 IYVWKIVEAL 436
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-202 |
1.37e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 49.71 E-value: 1.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 55 ATLKYFIVQVTAAMMLLFATMSNAWLSGQWSIQH----------MTHPIPLAMIIIALALKMGLAPLHMWFPE------- 117
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYdaistqnlslNTQLILLTGLLLGFGIKIPLVPLHTWLPDayteasp 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 118 ---ILQG-----------LSFNLGLILTTWQKLAPLIlflqipiespalyTTLGLVSILVGGWGGRNQTQLRKMLAYSSI 183
Cdd:PRK07363 238 avaILLGgvlaklgtyglLRFGLQLFPQTWSLVAPGL-------------AIIGTISVIYGALSAIAQKDIKRMVAYSSI 304
|
170
....*....|....*....
gi 667794792 184 AHLGWIVLVMQFSSSLAFL 202
Cdd:PRK07363 305 GHMGYILVAAAAGTQLSLL 323
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
10-299 |
1.73e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 49.38 E-value: 1.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 10 FSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATmsnAWLSGQWSIQHM 89
Cdd:PRK08377 114 FLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGV---ALIYGATGTLNM 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 90 TH-------------PIPLAMIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPL-----ILFLQIPIESPA 151
Cdd:PRK08377 191 AHiaqlagtidptvaQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLyamarILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 152 ----LYTTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVM----QFSSSLAFLVFLMYVIMTTPLFLTFQF--- 220
Cdd:PRK08377 271 svlkLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALalgtQAGVDAGVFHMINHAIVKALLFLAVGYvgi 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 221 -MKTTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAM 299
Cdd:PRK08377 351 tLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIHTM 430
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
154-309 |
2.58e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 49.03 E-value: 2.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 154 TTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAfLVFLMYVIMTTPLFLTFQFMK---------TT 224
Cdd:PRK12648 275 GGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLA-AVAAIFHIINHATFKASLFMAagiidhetgTR 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 225 TINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLP-----VAVIAALSALLSLFFYLRLSYAM 299
Cdd:PRK12648 354 DMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLGsldwlLPVAATLAGAFSVAYSLRFIHDV 433
|
170
....*....|
gi 667794792 300 SMTMPPNNLP 309
Cdd:PRK12648 434 FFGPPPDDLP 443
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
151-295 |
4.68e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 48.50 E-value: 4.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 151 ALYTTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVImTTPLFLTFQFM--------- 221
Cdd:PRK12650 273 WLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTL-AHALFKSSLFMligvvdhqa 351
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 667794792 222 KTTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILD-----ELTKQNMLPVAVIAALSALLSLFFYLRL 295
Cdd:PRK12650 352 GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTafleaPGGNAGVVLLLVGAALGAVFTFAYSARL 430
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
155-286 |
7.16e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 47.61 E-value: 7.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 155 TLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSS---LAFLVFLM-YVIMTTPLFLTFQFMKTTT----I 226
Cdd:PRK12644 272 VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaaLAGLAMLLaHALFKAALFLVVGIIDHSTgtrdI 351
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 227 NSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSAL 286
Cdd:PRK12644 352 RKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVLAGI 411
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-327 |
7.31e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 47.50 E-value: 7.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 7 LTFFSIMILGTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLF--------ATMSNA 78
Cdd:PRK06589 119 LFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLpaviliytKTGNLD 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 79 WLSGqwSIQHMTHPIPLAMIIIALALKMGLAPLHMWFPE-----------------ILQGLSFNLGLILTTWQklaplIL 141
Cdd:PRK06589 199 FVSG--GLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAamvahypvsallhavivVKTGLFCIYKILLYIFG-----LS 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 142 FLQIPIESPALYTTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVI----MTTPLFLT 217
Cdd:PRK06589 272 YLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVshsfAKICLFYS 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 218 ----FQFMKTTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAAL-----SALLS 288
Cdd:PRK06589 352 mgsiYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLvviasSILSA 431
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 667794792 289 LFFYLRLSYAMSMTMPPN-NLPSSLPWRLNPSHIPLFLTI 327
Cdd:PRK06589 432 LYLLKILSSIYKPSLSENsFITKSLPYLMQISVITCCCAL 471
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
55-294 |
1.19e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 46.73 E-value: 1.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 55 ATLKYFI------VQVTAAMMLLFATMSNAwlSGQWSIQH-MTHPIPLAM-------IIIALALKMGLAPLHMWFPE--- 117
Cdd:PRK05846 162 AATKFFLytllgsLLMLVAIIYLVVVYYNA--TGTFDIADlLNLPLPPGVqywlflaFFIAFAVKMPMFPLHTWLPDahv 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 118 --------ILQG----------LSFNLGLILTTWQKLAPLILflqipiespalytTLGLVSILVGGWGGRNQTQLRKMLA 179
Cdd:PRK05846 240 qaptagsvLLAGillkmgayglLRFSLPLFPDASHEFAPIII-------------TLGVIAIIYGALVALAQTDIKKLIA 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 180 YSSIAHLGWIVLVMQFSSSLAF--LVFLM--YVIMTTPLFLTFQF----MKTTTINSLSTSWAKTPILISLAPLTLFSLG 251
Cdd:PRK05846 307 YSSISHMGFVTLGIFAGNQLGIqgAIFQMisHGLSSAALFLLVGVlydrLHTRDIADYGGLAKVMPVLAAFFLFFAMASL 386
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 667794792 252 GLPPLTGFLPKWLILDELTKQNMLpVAVIAA----LSALLSLFFYLR 294
Cdd:PRK05846 387 GLPGTSGFVGEFLILLGSFQVNPV-IAFIATtgliLAAVYSLWLYQR 432
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-331 |
1.48e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 46.48 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 53 LEATLKYFIVQVTAAMMLL---------FATMSNAWLSGQwsIQHMTHPIPLAMI----IIALALKMGLAPLhMWFPEIL 119
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLlgigllygtFGTLNMAHIAMR--LNDMGDTATLTTIallfLLAFGMKAALFPF-MWLPAAY 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 120 QGLSFNLGLI---LTTWQKLAPLI-----LFLQIPIESPALYTTLGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVL 191
Cdd:PRK12663 234 HTPNTEVAALfaaLLTKVGIYALIrvftlLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILL 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 192 ------VMQFSSSLAFLVFLMyVIMTTPLFLTFQFMK---TTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPK 262
Cdd:PRK12663 314 glalgtPAGINGAIFYLVHDM-VVKTALFLIAGSLVRltgYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGK 392
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 667794792 263 WLILD-ELTKQN--MLPVAVIAALSALLSLFFYLRLSYAMSMTMPPNNLPSSLPWRLNPShipLFLTILSIA 331
Cdd:PRK12663 393 VLLVQgALDNGAyiLLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPL---SILAVVVIA 461
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
51-299 |
2.21e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.79 E-value: 2.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 51 RALEATLKYFIVQVTAAMMLLFATMSNAWLSGQWSIQHMTHPI-----------PLAMIIIALALKMGLAPLHMWFPEIL 119
Cdd:PRK06277 147 EAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALlvnptspviygGLLLLIFGLLYGSGLPPFHTIKSDIY 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 120 QGLSFNLGLILTTWQKLAPLILFLQI------PIESPALYTTLGLVSILVGGWG---GRNQTQLRKMLAYSSIAHLGWIV 190
Cdd:PRK06277 227 AKAKPFGSALLQTFSKFVLVALMLVIfklfggLSYFPSAQGVLIALSVLAMVFGvvmALLQTDYKRLLAYHAISQGGYVA 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 191 LVMQFSSSLAFLVFLMY----VIMTTPLFLTFQFM----KTTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPK 262
Cdd:PRK06277 307 AGLALGTPLGIVAGIFHainhVIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSK 386
|
250 260 270
....*....|....*....|....*....|....*..
gi 667794792 263 WLILDELTKQNMLPVAVIAALSALLSLFFYLRLSYAM 299
Cdd:PRK06277 387 LMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFYLI 423
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-297 |
2.31e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.84 E-value: 2.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 111 LHMWFPEILQGLSFNLGLILTTWQKLAPLIL-------FLQIPIeSPALYTTLGLVSILVGGWGGRNQTQLRKMLAYSSI 183
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLlirssplFEQAPL-ALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTC 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 184 AHLGWIVLVMQFSSSLAFLVFLM-YVIMTTPLFLTfqfmKTTTINSLS--TSWAKTPILISLAPLTL-------FSLGGL 253
Cdd:MTH00020 308 SQLGYMVVACGLSHYSISLFHLMnHAFFKALLFLS----AGSVIHALSdeQDMRKMGGLISFLPLTYiffligsLSLMGF 383
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 667794792 254 PPLTGFLPKWLILDELTKQNMLPVAV-IAALSALLSLFFYLRLSY 297
Cdd:MTH00020 384 PYLTGFYSKDLILELAFGQYYLIFAYwLGCFSALLTAFYSIRLIY 428
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-295 |
4.72e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 44.77 E-value: 4.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 9 FFSIMIL---GTLTVLSSSHWLVTWVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFATMSNAWLSGQWS 85
Cdd:PRK06591 117 FYGILLFahtGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLN 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 86 I-------QHMTHP----IPLAMIIIALALKMGLAPLHMWfpeILQGLSFNLGLILTTWQKLAPLI--------LFLQIP 146
Cdd:PRK06591 197 MtdiaaylQEHTNSriitIAIGFFLIGAILKTAFFPMHFW---MMRAYNNTASVILVYLAGISTIIgiyiiykfTYIIIG 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 147 IESPALYTT-----LGLVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYV--IMTTPLFLtfq 219
Cdd:PRK06591 274 YETIKTAITnfirpIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLLLAdsINKIALFL--- 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 667794792 220 fmktttINSLSTSWAKTPILIsLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRL 295
Cdd:PRK06591 351 ------IDAYNESYKREPNKV-LIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKM 419
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
10-269 |
1.44e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 43.63 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 10 FSIMILGTLTVLSSSHWLV---TWVGLEINTFAILPLMAQNHHPRALEATLKYFivqvtAAMMLLFATMSNAWLSGQWSI 86
Cdd:PRK06459 78 YILTILGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFVFMAFGEL-----STVLILAGFAWAFIISGTTNF 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 87 QHMTHPIPLAMIIIALALKMGLAPLHM--WFPEILQGLSFNLGLILT---TWQKLAPLILFLQIPIESPALYTTL----- 156
Cdd:PRK06459 153 SYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSatmTLMGVYGILKMTILTQTIPIGYFGLtilai 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 157 GLVSILVGGWGGRNQTQLRKMLAYSSI-------AHLGWIVLVMQFSSSLA--FLVFLMYVIMTTPLFLTFQFMKTTTIN 227
Cdd:PRK06459 233 GAFSILFGALYAYVSENVKGLLAFSTIenngailVALGLYMVTKQLITSIEhfSLITVILYSFAHSVAKTGLFLSSGLQE 312
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 667794792 228 SLSTSWAKTP--ILISLAPLTL-FSLGGLPPLTGFLPKWLILDEL 269
Cdd:PRK06459 313 KQSITYSKKIrnRWIELGLTLLaSSLSGLLPNIGGVASWLLLESL 357
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
97-291 |
2.53e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 42.16 E-value: 2.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 97 MIIIALALKMGLAPLHMWFPEILQGLSFNLGLILTTWQKLAPLILFLQIPIESPALYTTLGLVSILVGGWGGRNqtqLRK 176
Cdd:MTH00091 62 FQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFFQMFLLKS---YKN 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 177 MLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVIMTTPLFLTFQFMKTTTINSLstswaktpilislapLTLFSLGGLPPL 256
Cdd:MTH00091 139 LLILSSTESFNWLILSFFFSFFNVFFLFFYYFLLMLFLIPKFNNVNKLNFVSW---------------ETLLVFMNLPFS 203
|
170 180 190
....*....|....*....|....*....|....*
gi 667794792 257 TGFLPKWLILDELTKQNMLPVAVIAALSALLSLFF 291
Cdd:MTH00091 204 VTFFVKIFSLSEILKVLGFFLLFLLFLMFLSVLSL 238
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
87-337 |
2.64e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 42.82 E-value: 2.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 87 QHMTHPIPLAMIIIALALKMGLAPLHMWFPEILQGLS-FNLGLILTTWQKLAPLILFLQIPIESPA-----LYTTLGLVS 160
Cdd:PRK12646 205 NHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTpVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLIT 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 161 ILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLA---------FLVFLMYV----IMTTPLFLTFQFM------ 221
Cdd:PRK12646 285 MLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasIYVFVLFAalfhLMNHAIFKCALFMgvgiid 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 222 ---KTTTINSLSTSWAKTPILISLAPLTLFSLGGLPPLTGFLPKWLILDELTKQNMLP------VAVIAALSALLSLFFY 292
Cdd:PRK12646 365 heaGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSqfslisMIIIVFIGVIASIFTF 444
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 667794792 293 LRLSYAMSMTMPPNNLPSSLPWRlnPSHIPLFLTILSIASVSLLP 337
Cdd:PRK12646 445 TYALYMVKEVFWGKYDSKVFTKK--NIHEPWLFSLPSLILMVLVP 487
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
98-300 |
2.74e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 42.60 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 98 IIIALALKMGLAPLHMWFPE-----------ILQGLSFNLG---LILTTWQklaplILFLQIPIESPALyTTLGLVSILV 163
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKahveapvagsvLLAGILLKLGgygLVRLSWP-----ILPLGAQNLAPAV-IAMGIVGIVY 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 164 GGWGGRNQTQLRKMLAYSSIAHLGW--IVLVMQFSSSLAFLVFLMYV--IMTTPLFLTFQFM----KTTTINSLSTSWAK 235
Cdd:MTH00226 310 GSFATCRQIDVKRLVAYSSVAHMGLvsITLVTHDIIGLTGSIFIMLAhgIVSSLLFILVTILydrhHTRLIKYYRGLSIT 389
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 667794792 236 TPILISLAPLTLFSLGGLPPLTGFLPKWL-ILDELTKQNMLPVAVIAA--LSALLSLFFYLRLSYAMS 300
Cdd:MTH00226 390 MPIWGTIMIVTSLANVAVPPSGNFIGEYLsILSSFNWNPIIGVFVCSGviLSAVYSFYFANRVTFGAP 457
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
30-262 |
5.36e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 41.49 E-value: 5.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 30 WVGLEINTFAILPLMAQNHHPRALEATLKYFIVQVTAAMMLLFA---------TMSNAWLSGQW-SIQHMTHPIPLAMII 99
Cdd:PRK12665 137 YVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGialvyaatgTLNMADLAVRLdELPSGTRTALFAVLL 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 100 IALALKMGLAPLHMWFPE-----------ILQGLSFNLGL--ILTTWQKLAPlilflqipieSPALYTTL---GLVSILV 163
Cdd:PRK12665 217 VAFGIKAAVFPLSFWLPDsyptapapvtaVFAGLLTKVGVyaIIRTHTLLFP----------GGGLDTLLmvvALLTMVV 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 164 GGWGGRNQTQLRKMLAYSSIAHLGWIVLVMQFSSSLAFLVFLMYVI----MTTPLFLTFQFMK----TTTINSLSTSWAK 235
Cdd:PRK12665 287 GILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAhhitVQTTLFLVVGLIErqagSSSLRRLGGLAKA 366
|
250 260
....*....|....*....|....*..
gi 667794792 236 TPILISLAPLTLFSLGGLPPLTGFLPK 262
Cdd:PRK12665 367 SPLLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
99-191 |
5.73e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 41.56 E-value: 5.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 99 IIALALKMGLAPLHMWFPE-----------ILQG----------LSFNLGLILTTWQKLAPLILflqipiespalytTLG 157
Cdd:PRK12561 192 LIAFGVKLPIFPLHTWLPDahgeasapvsmILAGvllkmggyalIRFNVQMLPDAHVYFAPALA-------------ILG 258
|
90 100 110
....*....|....*....|....*....|....
gi 667794792 158 LVSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVL 191
Cdd:PRK12561 259 VVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLL 292
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-206 |
5.18e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 38.49 E-value: 5.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 100 IALALKMGLAPLHMWFPE-----------ILQGLSFNLG---LILTTWQKL-------APLILflqipiespalytTLGL 158
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQahveapvagsvILAGVLLKLGgygFIRFSWPLLpeaseyfSPLIQ-------------TLSL 280
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 667794792 159 VSILVGGWGGRNQTQLRKMLAYSSIAHLGWIVLVMqFSSSLAFLV---FLM 206
Cdd:MTH00217 281 LAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGI-FSHTIQGLVaaiFLM 330
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
99-295 |
7.85e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 38.01 E-value: 7.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 99 IIALALKMGLAPLHMWFPEILQGLSFNL----GLILTTWQKLAPLILFLQIPIESPALYTT----LGLVSILVGGWGGRN 170
Cdd:PRK07691 216 LFVFATKAGLFPLYFWLPGSYYAPPIAIaalfGALLTKVGVYAIARTFTLFFSHDTSFTHYliliLALLTIIFGVIGAVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 171 QTQLRKMLAYSSIAHLGWIV--LVMQFSSSLAFLVF--LMYVIMTTPLFL----TFQFMKTTTINSLSTSWAKTPILISL 242
Cdd:PRK07691 296 YFDIKKIIIYNIMIAVGVILvgVAMMTESGMIGAIYylIHDMIVKAALFLligiMIKITGTTDLKKMGGLIKRYPVLGWM 375
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 667794792 243 APLTLFSLGGLPPLTGFLPKWLILDELTKQNMLPVAVIAALSALLSLFFYLRL 295
Cdd:PRK07691 376 FFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
111-304 |
8.26e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 38.07 E-value: 8.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 111 LHMWFPEILQGLSFNLGLILTTWQKLAPLILFlqipIESPALYTTLGLVSILVGGWG----------GRNQTQLRKMLAY 180
Cdd:MTH00210 230 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLI----IRSGPLFEGSPLALTIVTILGaltaffaatvGVVQNDLKKVIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667794792 181 SSIAHLGWIVLV---MQFSSSLAFLVflMYVIMTTPLFLTfqfmKTTTINSLS--TSWAKTPILISLAPLTL-------F 248
Cdd:MTH00210 306 STCSQLGYMVMVcgiSNYSTSLFHLM--NHAFFKALLFLS----AGSVIHAVSdeQDMRKMGGLIKSIPFTYvmiligsL 379
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 667794792 249 SLGGLPPLTGFLPKWLILDELTKQNMLPVAV-IAALSALLSLFFYLRLSYAMSMTMP 304
Cdd:MTH00210 380 SLMGFPYLTGFYSKDLILELTYDKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNT 436
|
|
| |
