|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-562 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 694.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 1 MCSISFVNLISMSLSCFLLSLYFLLNDMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDN 80
Cdd:MTH00165 3 MCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 81 HINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNYG 160
Cdd:MTH00165 83 NINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 161 SWNYIFYLEIMQNEFEMLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWL 240
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 241 GQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNS 320
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNS 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 321 QDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTG 400
Cdd:MTH00165 323 QDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 401 DLNCGSLNMLNDESWIMLRGMMGLLIMSIIGGSMLNWLIFPFPYMICLPIYMKLLTLFVCIVGGLFGYLISLSNLFFLNK 480
Cdd:MTH00165 403 DFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 481 SLFMYNLSTFLGSMWFMPYISTYGMIFYPLNYGQLVVKSFDQGWSEYFGGQHLYQKLSMYSKTLFLMHNNSLKIYLLLFV 560
Cdd:MTH00165 483 SLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFL 562
|
..
gi 667699636 561 FW 562
Cdd:MTH00165 563 LW 564
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-561 |
1.65e-170 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 495.52 E-value: 1.65e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 1 MCSISFVNLISMSLSCFLLSLYFLLNDMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDN 80
Cdd:MTH00151 3 MSSLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 81 HINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNYG 160
Cdd:MTH00151 83 FLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 161 SWNYIFyleiMQNEFEMLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTS-W 239
Cdd:MTH00151 163 HWSILS----MWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSsG 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 240 LGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNN 319
Cdd:MTH00151 239 FSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 320 SQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMT 399
Cdd:MTH00151 319 TQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVW 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 400 GDLNCGSLNMLNDESWIMLRGMMGLLIMSIIGGSMLNWLIFPFPYMICLPIYMKLLTLFVCIVGGLFgyliSLSNLFFLN 479
Cdd:MTH00151 399 GSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFL----SFGFWDSGF 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 480 KSLFMYNLSTFLGSMWFMPYISTYGMIFYPLNYGQLVVKSFDQGWSEYFGGQHLYQKLSMYSKTLFLMHNNSLKIYLLLF 559
Cdd:MTH00151 475 SSSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLI 554
|
..
gi 667699636 560 VF 561
Cdd:MTH00151 555 LL 556
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
17-561 |
1.23e-164 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 480.30 E-value: 1.23e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 17 FLLSLYFLLNDMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSM 96
Cdd:MTH00209 17 FLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 97 MLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNYGSWNyIFYLEIMQNEfe 176
Cdd:MTH00209 97 NFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNSNL-- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 177 MLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NIILSTSWLGQLMLLLSGLTMFMA 255
Cdd:MTH00209 174 GSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFfPSLFSSPFFSMSLLLLGSLTTLMA 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 256 GLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIHMPL 335
Cdd:MTH00209 254 SMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPI 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 336 TSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTGDLNCGSLNMLNDESW 415
Cdd:MTH00209 334 TSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 416 IMLRGMMGLLIMSIIGGSMLNWLIFPFPYMICLPIYMKLLTLFVCIVGGLFGYLISLSNLFFLNKslfmYNLSTFLGSMW 495
Cdd:MTH00209 414 LNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKG----YKVNYFLSQMW 489
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 667699636 496 FMPYISTYGMIFYPLNYGQLVVKSFDQGWSEYFGGQHLYQKLSMYSKTLFLMHNNSLKIYLLLFVF 561
Cdd:MTH00209 490 FLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMML 555
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
9-558 |
2.42e-160 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 469.63 E-value: 2.42e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 9 LISMSLSCFLLSLYFLLNDMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIML 88
Cdd:MTH00207 14 LWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 89 VLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNYGSWNYIFYL 168
Cdd:MTH00207 94 VLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHWSITNMW 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 169 EIMQNEFEMLMIgslvMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NIILSTSWLGQLMLLL 247
Cdd:MTH00207 174 QTDMNNYIALSI----MIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFyPFLSSTYWFNPALLLT 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 248 SGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMG 327
Cdd:MTH00207 250 ASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMG 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 328 GLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTGDLNCGSL 407
Cdd:MTH00207 330 NLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPY 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 408 NMLNDESWIMLRGMMGLLIMSIIGGSMLNWLIFPFPYMICLPIYMKLLTLFVCIVGGLFGYLISLSNLFFLNKSLFMYNL 487
Cdd:MTH00207 410 HHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLS 489
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 667699636 488 STFLGSMWFMPYISTYGMIFYPLNYGQLVVKSFDQGWSEYFGGQHLYQKLSMYSKTLFLMHNNSLKIYLLL 558
Cdd:MTH00207 490 HFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMM 560
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
10-561 |
1.21e-115 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 355.80 E-value: 1.21e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 10 ISMSLSCFLLSLYFLLNDMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLV 89
Cdd:MTH00211 37 LSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYL 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 90 LMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTAL-SNRIGDVALLLSIAWML-NYGSWNYIFY 167
Cdd:MTH00211 117 LLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 168 LEIMQNEFEMLMigsLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWL-GQLMLL 246
Cdd:MTH00211 197 FILNLDLTLFLL---GLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLiLGAVLL 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 247 LSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLM 326
Cdd:MTH00211 274 LGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKM 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 327 GGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTGDLNCGS 406
Cdd:MTH00211 354 GGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLS 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 407 LNMLNDESWIMLRGMMGLLIMSIIGGSMLNWLIFPFPYMI-CLPIYMKLLTLFVCIVGGLFGYLislsnLFFLNKSLFMY 485
Cdd:MTH00211 434 LSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGLE-----LVNLTHKQLKT 508
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 667699636 486 NLSTFLGSMWFMPYISTYGMIFYPLNYGQ-LVVKSFDQGWSEYFGGQHLYQKLSMYSKTLFLMHNNSLKIYLLLFVF 561
Cdd:MTH00211 509 STLSFSNMLGYYPPIIHRLLPKLSLKWGQtLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLL 585
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
17-559 |
7.66e-107 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 332.90 E-value: 7.66e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 17 FLLSL----YFLLNDMIYFI-EWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLM 91
Cdd:MTH00004 44 FLISLipltLFLNSGTESITtNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLI 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 92 FVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTA-LSNRIGDVALLLSIAWM-LNYGSWNyIFYLE 169
Cdd:MTH00004 124 FLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWE-IQQLF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 170 IMQNEFEMLMIGslVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSwlgQLM----L 245
Cdd:MTH00004 203 SPTQTPTLPLLG--LILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNN---QTAlticL 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 246 LLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRL 325
Cdd:MTH00004 278 CLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRK 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 326 MGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTGDLNCG 405
Cdd:MTH00004 358 MGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTP 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 406 SLNMLNDESWIMLRGMMGLLIMSIIGGSMLNWLIFPF-PYMICLPIYMKLLTLFVCIVGGLFGY-LISLSNLFFLNKSLF 483
Cdd:MTH00004 438 PTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALeLSNMTTTLTPPKQNT 517
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 667699636 484 MYNLSTFLGSMWFMPYISTYGMIfypLNYGQLVVKSF-DQGWSEYFGGQHLYQKLSMYSKTLFLMHNNSLKIYLLLF 559
Cdd:MTH00004 518 LHNFSNQLAFFNPLTHRLLPMTL---LKSSQKIATHLiDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSF 591
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
9-470 |
7.65e-104 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 325.57 E-value: 7.65e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 9 LISMSLSCFLLSLYFL---LNDMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRF 85
Cdd:COG1009 34 AALAPLAAFVLSLLLFpavLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 86 IMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNY-GSWN 163
Cdd:COG1009 114 FAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIgFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIaGTLN 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 164 Y--IF-YLEIMQNEFEMLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILS-TSW 239
Cdd:COG1009 194 FseLLaAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFAlSPV 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 240 LGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMnN 319
Cdd:COG1009 274 WLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-G 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 320 SQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILE-IVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSM 398
Cdd:COG1009 353 TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVF 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 399 TGDLNCGSLNMLNDESWIMLRGMMGLLIMSIIGGSMLNWL---------IFPFPYMICLPIYMKLLTLFVCIVGGLFGYL 469
Cdd:COG1009 433 FGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYL 512
|
.
gi 667699636 470 I 470
Cdd:COG1009 513 L 513
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
14-559 |
2.26e-100 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 316.91 E-value: 2.26e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 14 LSCFLLSLYFLLN-DMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMF 92
Cdd:MTH00208 68 LSLINLLIWILLGcPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 93 VLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTA-LSNRIGDVALLLSIAW-MLNYGSWNY--IFYL 168
Cdd:MTH00208 148 LLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINFNSWNLneILSL 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 169 EIMQNEFEMLMIGSLVmLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NIILSTSWLGQLMLLL 247
Cdd:MTH00208 228 NNSNSFLINILLFGIL-LAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTsPLISNSPWFLSLCLIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 248 SGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMG 327
Cdd:MTH00208 307 GSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMG 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 328 GLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTGDLNCGSL 407
Cdd:MTH00208 387 GLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPL 466
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 408 NMLNDESWIMLRGMMGLLIMSIIGGSMLNWLIFPFPyMICLPIYMKLLTLFVCIVGGLFgyliSLSNLFFLNKSLFMYNL 487
Cdd:MTH00208 467 SPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAF----SFSFLLSLSSNPINSNF 541
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 667699636 488 STFLGSMWFMPYISTYGMIFYPLNYG-QLVVKSFDQGWSEYFGGQHLYQKLSMYSKTLFLMHNNSLKIYLLLF 559
Cdd:MTH00208 542 FSFLSNQWFFVNISHSIIISFSFFTSlFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSS 614
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
34-561 |
7.47e-100 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 314.92 E-value: 7.47e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 34 WELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWD 113
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 114 GLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLSIAW-MLNYGSW--NYIFyleiMQNEFEMLMIGSLVmLAAM 189
Cdd:MTH00066 144 GVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWelQQIF----LLNDNSTLPLLGLI-LAAA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWLGQLM-LLLSGLTMFMAGLGANFEFDLKKI 268
Cdd:MTH00066 219 GKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIcLCLGALTTLFTAACALTQNDIKKI 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 269 IALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALC 348
Cdd:MTH00066 299 VAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALT 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 349 GMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTGDLNCGSLNMLNDESWIMLRGMMGLLIMS 428
Cdd:MTH00066 379 GTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGS 458
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 429 IIGGSMLNWLIFP-FPYMICLPIYMKLLTLFVCIVgglfGYLISLSNLFFLNKSLFMYNLSTFLGSMWFMPYISTYGMIF 507
Cdd:MTH00066 459 IIAGLLIIFNILPmKPQILTMPTFMKLAALLVTLL----GLLIALDLAKITSKTTPKTKMHSFSNLLAFFPTIIHRLSPK 534
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 667699636 508 YPLNYGQ-LVVKSFDQGWSEYFGGQHLYQKLSMYSKTLFLMHNNSLKIYLLLFVF 561
Cdd:MTH00066 535 TNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLI 589
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
9-481 |
2.18e-94 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 300.74 E-value: 2.18e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 9 LISMSLSCFLLSLYFLLNDMIYFIE--WELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFI 86
Cdd:TIGR01974 38 GLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 87 MLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNY-GSWNY 164
Cdd:TIGR01974 118 AYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYfGTLNF 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 165 --IFYLEImQNEFEMLMIGSLVML-AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-IILSTSWL 240
Cdd:TIGR01974 198 qeVFALAP-GAFFSALTLICLLLFiGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSpLFELSPTA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 241 GQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNS 320
Cdd:TIGR01974 277 LYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHE 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 321 QDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTG 400
Cdd:TIGR01974 357 QDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHG 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 401 DLNCGSLNMLNDESWIMLRGMMGLLIMSIIGGSMLNWLIFPFPYMI-----------CLPIYMKLLTLFVCIVGGLFGYL 469
Cdd:TIGR01974 437 KERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLKGVLptsaepalehhHVPALEIWSPTAVAILGILLAYL 516
|
490
....*....|..
gi 667699636 470 ISLSNLFFLNKS 481
Cdd:TIGR01974 517 LYLGNPTLPAKI 528
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
3-492 |
1.42e-93 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 298.69 E-value: 1.42e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 3 SISFVNLISMSLSC-FLLSL-----YFLLNDMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYM 76
Cdd:MTH00108 29 TNNYPLYVKTTISYaFIISLiptmmFIHSGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYM 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 77 MNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTA-LSNRIGDVALLLSIAW 155
Cdd:MTH00108 109 HSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAW 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 156 -MLNYGSWNY--IFYLEimQNEFEMLMIGSLvmLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 232
Cdd:MTH00108 189 fLLNLNSWDLqqIFMLN--PNNSNLPLMGLL--LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFH 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 233 IILSTSWLGQ-LMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAG 311
Cdd:MTH00108 265 PLMENNKTIQtLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSG 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 312 AIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSF 391
Cdd:MTH00108 345 SIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYST 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 392 RLVYYSMTGDLNCGSLNMLNDESWIMLRGMMGLLIMSIIGGSMLNWLIFPF--PYMIcLPIYMKLLTLFVCIVGGLFGY- 468
Cdd:MTH00108 425 RIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTtiPQMT-MPLYLKLTALAVTILGFILALe 503
|
490 500
....*....|....*....|....
gi 667699636 469 LISLSNLFFLNKSLFMYNLSTFLG 492
Cdd:MTH00108 504 LNLLTNNLKFKYPSNTFKFSNMLG 527
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
9-470 |
2.45e-89 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 288.21 E-value: 2.45e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 9 LISMSLSCFLLSLYFLLNDMIYFIE-WELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIM 87
Cdd:PRK06590 40 GLSALLSLVVFFDFLLGGGRAFSQTlWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFA 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 88 LVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNY-GSWNY- 164
Cdd:PRK06590 120 YLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEfGSLNYd 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 165 -IFYLEIMQNEFEMLM---IGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWL 240
Cdd:PRK06590 200 eVFAAAPQFFGLGWSAltlICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPE 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 241 GQLM-LLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNN 319
Cdd:PRK06590 280 ALLFvAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHH 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 320 SQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEiVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMT 399
Cdd:PRK06590 360 EQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE-AAFANGHINLFVAGLVGAFLTAFYSFRLIFLVFH 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 400 GDlNCGSLNMLNDESWIMLRGMMGLLIMSIIGG-----SMLNWLIFPFPY-----MICLPIYMKLLTLFVCIVGGLFGYL 469
Cdd:PRK06590 439 GK-EKEKIHHPHESPAVMTLPLIVLAVLSVFAGalivpPFLGVLPLTTELahgeaEHHLPVWVALLPLVVALAGIALAWL 517
|
.
gi 667699636 470 I 470
Cdd:PRK06590 518 L 518
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
34-561 |
9.85e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 267.85 E-value: 9.85e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 34 WELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWD 113
Cdd:MTH00137 70 WNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 114 GLGLVSYCLVIYFQNIKSYNAGMLTA-LSNRIGDVALLLSIAWML-NYGSWNY--IFYLeimQNEFEMLMIGSLVMLAAM 189
Cdd:MTH00137 150 GVGIMSFLLIGWWYGRADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWEIqqIFAL---SKDFDLTLPLLGLILAAT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 190 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-------NIILSTS-WLGQLMlllsglTMFMA--GLGA 259
Cdd:MTH00137 227 GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLsplmennQTALTTClCLGALT------TLFTAtcALTQ 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 260 NfefDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIHMPLTSAC 339
Cdd:MTH00137 301 N---DIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSC 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 340 FNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTGDLNCGSLNMLNDESWIMLR 419
Cdd:MTH00137 378 LTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVIN 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 420 GMMGLLIMSIIGGSMLNWLIFPF--PYMiCLPIYMKLLTLFVCIVGGLFGY-LISLSN-LFFLNKSLFMYNLSTFLGsmw 495
Cdd:MTH00137 458 PIKRLAWGSIIAGLLITSNILPLktPVM-TMPPLLKLAALIVTILGLLIALeLASLTNkQFKPTPTLPPHHFSNMLG--- 533
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 667699636 496 FMPYISTYGMIFYPLNYGQLVV-KSFDQGWSEYFGGQHLYQKLSMYSKTLFLMHNNSLKIYLLLFVF 561
Cdd:MTH00137 534 FFPAIIHRLTPKLNLTLGQTIAtQMVDQTWLEKTGPKGIASLQLPLITTTSNIQQGMIKTYLTLFLL 600
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
5-503 |
9.10e-81 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 265.02 E-value: 9.10e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 5 SFVNLISMSLSCFLLSLYFLLNDMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINR 84
Cdd:MTH00020 33 SSCLIISLSWSFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPR 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 85 FIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLN-YGSW 162
Cdd:MTH00020 113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 163 NY--IFYLEIMQNEFEMLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWL 240
Cdd:MTH00020 193 DFssVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 241 GQLMLLLSG-LTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNN 319
Cdd:MTH00020 273 ALIIVTIVGsLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSD 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 320 SQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMT 399
Cdd:MTH00020 353 EQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFL 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 400 GDLNC--GSLNMLNDESWIMLRGMMGLLIMSIIGGSMLNWLIFPFPYMI--CLPIYMKLLTLFVCIVGGLFGYLI--SLS 473
Cdd:MTH00020 433 SNTNLkkAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIWSFQITLppIVPLSIKLLPVFLSLGGIGLVIILyfYSS 512
|
490 500 510
....*....|....*....|....*....|
gi 667699636 474 NLFFLNKSLFMYNLSTFLGSMWFMPYISTY 503
Cdd:MTH00020 513 KTFRVPFSFIGRNSYTFLGSAWQFNYILNY 542
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
10-529 |
1.14e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 249.15 E-value: 1.14e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 10 ISMSLSCFLLSLYFLLNDMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLV 89
Cdd:MTH00210 38 ISAIVSCCIFYETTLNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 90 LMFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLN-YGSWNY-IF 166
Cdd:MTH00210 118 SLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFsTI 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 167 Y--LEIMQNEFEMLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWLG-QL 243
Cdd:MTH00210 198 SslLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLAlTI 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 244 MLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDI 323
Cdd:MTH00210 278 VTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDM 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 324 RLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTGDLN 403
Cdd:MTH00210 358 RKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTN 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 404 CGSLNMLN--DESWIMLRGMMGLLIMSIIGGSMLNWLIFPFPYMICLPIYMKLLTLFVCIVGGLFGYLISLSNLFFLNKS 481
Cdd:MTH00210 438 SKKEVFIGvhESSWNITFPLLLLAFGSIFVGYLGKEVVLSNVIPPIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKIS 517
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 667699636 482 ------LFMYNLSTFLGSMWFMPYISTYGMIFYPLNYGQLVV-KSFDQGWSEYFG 529
Cdd:MTH00210 518 rrgvsiRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFGHLITyRIIDRGLLEIIG 572
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
32-401 |
6.15e-65 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 224.52 E-value: 6.15e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 32 IEWelVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLG 111
Cdd:PRK07376 73 FEW--ASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVF 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 112 WDGLGLVSYCLVIYFQNIKSY-NAGMLTALSNRIGDVALLLSIA---WMLNYgswnyiFYLEIMQNEFEMLM-------- 179
Cdd:PRK07376 151 WELVGMCSYLLVGFWYDRKGAaDAAQKAFVVNRVGDFGLLLGILglfWATGS------FDFDGIADRLSELVssgavsgw 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 180 ----IGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTswLGQLMLLLSGLTMFMA 255
Cdd:PRK07376 225 lallLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQ--FPAVMTVIAWTGAITA 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 256 GLGANF---EFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNN--------SQDIR 324
Cdd:PRK07376 303 FLGASIaltQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMR 382
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 667699636 325 LMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMfsFFLYYFSTGLTVSYSFRLVYYSMTGD 401
Cdd:PRK07376 383 LMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPAL--WFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
4-531 |
5.89e-63 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 219.06 E-value: 5.89e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 4 ISFVNLISMSLSCFLLSLYFLLNDMIYFIE-WELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHI 82
Cdd:MTH00032 31 LSTICMGSSTLIALFLAYEVLINDAVVHIElYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHV 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 83 NRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQN-IKSYNAGMLTALSNRIGDVALLLSIAWM----- 156
Cdd:MTH00032 111 PRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktig 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 157 -LNYGSWNYIFYLE-IMQNEFE-----------MLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTA 223
Cdd:MTH00032 191 sLDFLTFNGGSVGSgIMDRGYYgggayesplapFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTA 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 224 GVYLLIRFNIILSTSWLGQLMLLLSG-LTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM-GFLKLAMFHLLTHAL 301
Cdd:MTH00032 271 GVFLMIRSFPLFEKAPLTLLIITIFGaLTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAF 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 302 FKALLFMCAGAIIHNMN-NSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIV-------------- 366
Cdd:MTH00032 351 FKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTysgrnmgipfgssl 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 367 ----------------------SISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTGDLNCGSLNMLNDESWIMLRGMMGL 424
Cdd:MTH00032 431 lkiqgdigikkddrgsiggpegYPSRGSAFAFWLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHINIVDKRVLTV 510
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 425 LIMSIIGGSMLNWLIFPF-----------PYMICLPIYMKLLTLFVCIVGGLFGYLISLSNLFFLNKSLFMYNLSTFLGS 493
Cdd:MTH00032 511 LSLLCFGAIFVGYLIQDIligdiehpivpPLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIYSFLGG 590
|
570 580 590
....*....|....*....|....*....|....*....
gi 667699636 494 MWFMPYISTYGMIFYPLNYGQL-VVKSFDQGWSEYFGGQ 531
Cdd:MTH00032 591 AWQGDHLINKLVAIPLFSFGHWgIYKTLDRGWLELFGPQ 629
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
4-487 |
2.16e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 209.00 E-value: 2.16e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 4 ISFVNLISMSLSCFLLSLYFL--LNDMIYFIEWELVSLnsmsivmTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNH 81
Cdd:MTH00095 2 NILIFLILFFFFFLLLFILFLpfMKLNLFFLEWDFLSL-------KFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELN 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 82 INRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNYGs 161
Cdd:MTH00095 75 FNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 162 wnYIFYLEIMQNEFEMLMIgslvMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWLG 241
Cdd:MTH00095 154 --YYFFSFSFFSSSMILML----LLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 242 QLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQ 321
Cdd:MTH00095 228 KIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 322 DIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMtgd 401
Cdd:MTH00095 308 DGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFF--- 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 402 LNCGSLNMLNDESWIMLRGMMGLLIMSIIGgsmLNWLIFPFPYMICLPIYMKLLTLFVCIVGGLFGYLISLSNLFFLNKS 481
Cdd:MTH00095 385 LSFSKVVNVYSSSVLMNFLSLMLVFFSVFF---LWWLNFNLLNLPSLFLYLDFYVPLFYLFMIMLFSFFFFKLLFKELKY 461
|
....*.
gi 667699636 482 LFMYNL 487
Cdd:MTH00095 462 KFFVDY 467
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
102-378 |
2.33e-56 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 191.37 E-value: 2.33e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 102 SPNLISILLGWDGLGLVSYCLVIYF-QNIKSYNAGMLTALSNRIGDVALLLSIAWMLNYGSWNYIFYL----EIMQNEFE 176
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskalTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 177 MLMIGSLVMLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNIILSTS--WLGQLMLLLSGLTMF 253
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSspFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 254 MAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGF---LKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLS 330
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 667699636 331 IHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFL 378
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAG 287
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
10-408 |
2.11e-53 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 193.57 E-value: 2.11e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 10 ISMSLScFLLSLYFLLNDMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLV 89
Cdd:CHL00025 50 IVMIFS-LNLSIQQINGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 90 LMFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLSIA---WMLnyGSWNY- 164
Cdd:CHL00025 129 SFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGILgfyWIT--GSFEFr 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 165 ----IFYLEIMQNEFEML---MIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-FNIILS 236
Cdd:CHL00025 207 dlfeIFNNLIYNNEVNLLfatLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPLFIV 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 237 TSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHN 316
Cdd:CHL00025 287 IPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHS 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 317 M--------NNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILeivsiSNVNMFSFFLY---YFSTGL 385
Cdd:CHL00025 367 MepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAiiaWSTAGL 441
|
410 420
....*....|....*....|...
gi 667699636 386 TVSYSFRLVYYSMTGDLNCGSLN 408
Cdd:CHL00025 442 TAFYMFRIYLLTFEGHLRVHFQN 464
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-396 |
1.20e-49 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 177.26 E-value: 1.20e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 47 TFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYF 126
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 127 QNIKSYNAGMLTALSNRIGDVALLLSIAWM-LNYGSWNYIFYLEIMQ--NEFEMLMIGSLVMLAAMTKSAQIPFSSWLPA 203
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAelDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 204 AMA-APTPVSALVhSSTLVTAGVYLLIRFNIIL----STSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLfgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 279 LMMSILSMG---FLKLAMFHLLTHALFKALLFMCAGAIIHnMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAG 355
Cdd:COG0651 310 YILLGLGLGtplGLAGALFHLLNHALAKALLFLAAGAIER-ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 667699636 356 FYSKDMILEiVSISNVNMFSFFLYYFSTGLTVSYSFRLVYY 396
Cdd:COG0651 389 FVSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
41-364 |
2.54e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 182.43 E-value: 2.54e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 41 SMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSY 120
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 121 cLVIYF--QNIKSYNAGMLTALSNRIGDVALLLSIAWMLNYG-----SWNYIFYLEIMQNEFeMLMIGSLVMLAAMTKSA 193
Cdd:PRK12647 133 -LLIGFnhEREAARRAALQALLVTGGGGLALLAGLILLGNVTgtyslSELLASGDVIREHPL-YLAILLLVLGGAFTKSA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 194 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWLGQLMLLLSG-LTMFMAGLGANFEFDLKKIIALS 272
Cdd:PRK12647 211 QFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGgLTMLTGALLAVRQTDLKLILAYS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 273 TLSQLGLMMSILSMGF---LKLAMFHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSIHMPLTSACFNVSNLALCG 349
Cdd:PRK12647 291 TVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
330
....*....|....*
gi 667699636 350 MPFLAGFYSKDMILE 364
Cdd:PRK12647 370 LPPLFGFLAKELIYE 384
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-395 |
7.45e-48 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 179.62 E-value: 7.45e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 47 TFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYF 126
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 127 QNIKSYNAGMLTALS-NRIGDVALL---LSIAWMLnyGSWNYIFYL---EIMQNEFEMLMIGSLVMLAAMTKSAQIPFSS 199
Cdd:PRK12648 151 HHRADARRGARMALTvTGAGGLALLagvLLLGHIV--GSYDLDVVLaagDLIRAHPLYPPALVLILLGAFTKSAQFPFHF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 200 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWLGQLMLLLSGL-TMFMAGLGANFEFDLKKIIALSTLSQLG 278
Cdd:PRK12648 229 WLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLiTLLLGAYFALFQHDLKGLLAYSTISHLG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 279 LMMSILSMGfLKLA----MFHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLA 354
Cdd:PRK12648 309 LITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLN 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 667699636 355 GFYSKDMIL-EIVSISNVNMFSFFLYYFST---GLTVSYSFRLVY 395
Cdd:PRK12648 387 GFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSLRFIH 431
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
6-400 |
8.78e-48 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 178.50 E-value: 8.78e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 6 FVNLISMSLSCFLLSLYFLL---NDMIYFIEWelvsLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHI 82
Cdd:TIGR00940 30 FVLAIPLVCFLYTLGLYPYTasgGVLHYTIDW----VPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 83 NRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIY-FQNIKSYNAGMLTALSNRIGDVALLLSIAWM-LNYG 160
Cdd:TIGR00940 106 PNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYwHHRAHSRYGAQKSLTITVFGGLAMLGGLILLgKITG 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 161 SWNYIFYLE---IMQNEFEMLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILST 237
Cdd:TIGR00940 186 SFSIDAVIAsadAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAG 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 238 SWLGQLMLLLSGL-TMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKL----------------AMFHLLTHA 300
Cdd:TIGR00940 266 TEAWFWIVGLAGLiTLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHA 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 301 LFKALLFMCAGAIIHNmNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMIL-EIVSISNVNMFSF--- 376
Cdd:TIGR00940 346 TFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFaEAITAHLVNPFDTvtl 424
|
410 420
....*....|....*....|....*....
gi 667699636 377 -----FLYYFSTGLTVSYSFRLVYYSMTG 400
Cdd:TIGR00940 425 gylfpYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
51-394 |
2.08e-47 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 178.31 E-value: 2.08e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 51 DWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIyfQNIK 130
Cdd:PRK12650 78 DALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA--RSGS 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 131 SYNAG-MLTALSNRIGDVALLLSIAWM------------LNYGSWNyifyleimQNEFEMLMIGSLVMLAAMTKSAQIPF 197
Cdd:PRK12650 156 GGEAGsIRTLILTFFGGLTLLAAVAIAatqtgttslsgiLHSDVWA--------EKPGLTTVVAVLIAVAAFTKSAQFPF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 198 SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWLGQLMLLLSGL-TMFMAGLGANFEFDLKKIIALSTLSQ 276
Cdd:PRK12650 228 HFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMiTALMGAVFAVQKTDLKKLTAYSTVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 277 LGLMMSILSMGF---LKLAMFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFL 353
Cdd:PRK12650 308 LGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQA-GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 667699636 354 AGFYSKDMILEIVSISNVNMFSFFLYYFSTGL----TVSYSFRLV 394
Cdd:PRK12650 387 FGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALgavfTFAYSARLV 431
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
389-562 |
6.50e-47 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 162.33 E-value: 6.50e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 389 YSFRLVYYSMTGDLNCGSLNMLNDESWIMLRGMMGLLIMSIIGGSMLNWLIFPFPYMICLPIYMKLLTLFVCIVGGLFGY 468
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 469 LISLSNLFFLNKSLfMYNLSTFLGSMWFMPYISTYGMIFYPLNYGQLVVKSFDQGWSEYFGGQHLYQKLSMYSKTLFLMH 548
Cdd:pfam06455 81 ELSNLSNKQLKKSL-NFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170
....*....|....
gi 667699636 549 NNSLKIYLLLFVFW 562
Cdd:pfam06455 160 KGLIKIYLLSFLLW 173
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
13-476 |
1.05e-46 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 171.60 E-value: 1.05e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 13 SLSCFLLSLYFLLNDMIYFIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMF 92
Cdd:MTH00063 6 SLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 93 VLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNYGSWNYIFYLeimq 172
Cdd:MTH00063 86 VLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFLCCL---- 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 173 nefemlmigsLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWLGQLMLLLSGLTM 252
Cdd:MTH00063 162 ----------FFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLTI 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 253 FMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIH 332
Cdd:MTH00063 232 FITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSILY 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 333 MPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTGLTVSYSFRL--VYYSMTGDLNCGSLNML 410
Cdd:MTH00063 312 GSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLclILFGVKSSLSSGVRFLF 391
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 667699636 411 NDESWImlrgmmgllimsIIGGSMLNWLIFP-FPYMICLPIYMKLLTLFVCIVGGLFGYLISLSNLF 476
Cdd:MTH00063 392 FNSGLM------------VFLWLFINYYVFLlLDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSNLF 446
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
11-363 |
8.03e-46 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 168.23 E-value: 8.03e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 11 SMSLSCFLLSLYFLLNDMIYFIEWELVSLNSMsIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNH-------IN 83
Cdd:PRK06525 35 ALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDV-ALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGNRehpvhegTG 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 84 RFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNYGSWN 163
Cdd:PRK06525 114 RYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTF 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 164 YIFYLEIMQNEFEMLMIGsLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRfnIILS----TSW 239
Cdd:PRK06525 194 ALSALSGLHGSLKYLVFL-GILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFAR--AIQSmgpiPHV 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 240 LGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGF------LKLAMFHLLTHALFKALLFMCAGAI 313
Cdd:PRK06525 271 IGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgsrlaLEGSIAYIFNHAFAKSLFFLVAGAL 350
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 667699636 314 IHNMnNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMIL 363
Cdd:PRK06525 351 SYSC-GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
31-395 |
2.15e-42 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 162.62 E-value: 2.15e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 31 FIEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYM-MNDNHINRFIMLVLMFVLSMMLLIISPNLISIL 109
Cdd:PRK12646 57 YLSTSIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMY 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 110 LGWDGLGLVSYCLVIY-FQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNYGSWNYIFYL-----EIMQNEFEMLMIgSL 183
Cdd:PRK12646 137 VFWELTSVSSFLLISYwYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEIlgqadHIKNHGLFIPMI-FM 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 184 VMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTS-WLGQLMLLLSGLTMFMAGLGANFE 262
Cdd:PRK12646 216 FLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnMYIYIVTFVGLITMLFGSITALKQ 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 263 FDLKKIIALSTLSQLGLMMSILSMG-----------------FLKLAMFHLLTHALFKALLFMCAGAIIHNmNNSQDIRL 325
Cdd:PRK12646 296 WDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRI 374
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 667699636 326 MGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILE-IVSISNVNMFSFFLYYFSTGLTVSYS-FRLVY 395
Cdd:PRK12646 375 LSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDaLTQTGQLSQFSLISMIIIVFIGVIASiFTFTY 446
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
41-400 |
1.01e-41 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 160.86 E-value: 1.01e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 41 SMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNH-INRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVS 119
Cdd:PRK12645 67 SLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEqLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 120 YCLVIY-FQNIKSYNAGMLTALSNRIGDVALL------------LSIAWMLNYGSwnyifylEIMQNEFEML-MIgsLVM 185
Cdd:PRK12645 147 FLLISYwYEREASRYGAQKSMLITVFGGLSMLggfillyimtgsFSIREMIANAD-------EIQNSPLFIPaMI--LIL 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 186 LAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWLGQLMLLLSGL-TMFMAGLGANFEFD 264
Cdd:PRK12645 218 LGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLiTLFWGSLNAVKQTD 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 265 LKKIIALSTLSQLGLMMSILSMGFLKL----------------AMFHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGG 328
Cdd:PRK12645 298 LKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGG 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 329 LSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILE-IVSISNVNMFSF--------FLYYFSTGLTVSYSFRLVYYSMT 399
Cdd:PRK12645 377 LMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFEsMLNATEANLFSLdtwgvlfpVIAWVASVFTFVYSIIFIFKTFF 456
|
.
gi 667699636 400 G 400
Cdd:PRK12645 457 G 457
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
41-366 |
5.58e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 158.93 E-value: 5.58e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 41 SMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDN-HINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVS 119
Cdd:PRK12644 63 SLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEpRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLS 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 120 YCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLN-YGSWNYIfylEIMQNEFEMLMIGS---LVMLAAMTKSAQ 194
Cdd:PRK12644 143 FLLIgHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQaAGTYRLS---ELLADPPTGPAVSVavvLILVGALSKSAI 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 195 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWLGQLMLL-LSGLTMFMAGLGANFEFDLKKIIALST 273
Cdd:PRK12644 220 VPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLvLGLATMLLGGWRALRQHDLKLILAYGT 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 274 LSQLGLMMSILSMG-----FLKLAMfhLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSIHMPLTSACFNVSNLALC 348
Cdd:PRK12644 300 VSQLGFLTVLVGIGtrdaaLAGLAM--LLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMA 376
|
330
....*....|....*...
gi 667699636 349 GMPFLAGFYSKDMILEIV 366
Cdd:PRK12644 377 GLPPLLGFVAKEAALEAV 394
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
39-364 |
1.21e-34 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 139.58 E-value: 1.21e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 39 LNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLV 118
Cdd:PRK12649 67 LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSIT 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 119 SYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNYGSWNYIF--------YLEIMQNEFEMLMIGSLVMLAAMT 190
Cdd:PRK12649 147 SFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIatilqdseLIENIKGHPLFLITLILIFIGAAA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 191 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILS--TSWLgqlmLLLSG---LTMFMAGLGANFEFDL 265
Cdd:PRK12649 227 KSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSgtEAWF----ILVSGtgmITMVLAGFLAFRQTDI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 266 KKIIALSTLSQLGLMMSIL--------SMGFlKLAMFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSIHMPLTS 337
Cdd:PRK12649 303 KAILAYSTISQLAYLMTMYgyttyhepGLGV-AAATFHLLNHATFKACLFLVAGIVAHEA-ATRDIRKLGGLRKEMPITF 380
|
330 340
....*....|....*....|....*..
gi 667699636 338 ACFNVSNLALCGMPFLAGFYSKDMILE 364
Cdd:PRK12649 381 IVASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-439 |
2.96e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 135.78 E-value: 2.96e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 47 TFLFDWMSLLFMSFVLMISSLVIFYSkeYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYF 126
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 127 QNIKSYNAGMLTALSNRIGDVALLLSIAwmLNY---GSWNYIFYLEIMQNEFEMLMIGSLVMLAAMTKSAQIPFSSWLPA 203
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVG--LLYgvtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPR 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 204 AMAAPTPVSALVHSSTLVTAGVYLLIRFNI------ILSTSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK08375 228 AYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 278 G---LMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLA 354
Cdd:PRK08375 308 GyilLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTY-GTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 355 GFYSKDMILeIVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTGDLNCGSLNMLNDESWIMLRGMMGLLIMSIIGGSM 434
Cdd:PRK08375 387 GFVSKWYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALLSLLLGIY 465
|
....*
gi 667699636 435 LNWLI 439
Cdd:PRK08375 466 AGPLL 470
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
91-359 |
2.76e-28 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 119.61 E-value: 2.76e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 91 MFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKS-YNAGMLTALSNRIGDVALLLSIaWMLNYGSWNYIFylE 169
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAF-GLLARESGSYDF--A 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 170 IMQNEFEMLMIGSLVMLAAM----TKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNIIL---STSWLG 241
Cdd:PRK06521 198 AMRAAHLSPFWASLVFLLALfgfgAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLlgaPGWWWG 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 242 QLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSI-LSMGF------------LKLAMFHLLTHALFKALLF 307
Cdd:PRK06521 277 VLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIfVGLgLAMVFiaygmpllaalaLTAALYHLLNHALFKSLLF 356
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 667699636 308 MCAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSK 359
Cdd:PRK06521 357 LGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE 407
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
46-364 |
1.02e-27 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 117.91 E-value: 1.02e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 46 MTFLFDWMSLLFMSFVLMISSLVIFYSKEY---MMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCL 122
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 123 VIY-FQNIKSYNAGMLTALSNRIGDVALLLSIAWM-LNYGSWNYIFyLEIMQNEFEMLMIgsLVMLAAMTKSAQIPFSSW 200
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFELSP-LGASAGILSLVFL--LLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 201 LPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNIILSTS--WLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK08667 228 LPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPelWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 278 GLMM--------------SILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNVS 343
Cdd:PRK08667 307 GIILmgiglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHAT-GTRNIEKMGGLVKLMPYTSALFLVG 385
|
330 340
....*....|....*....|.
gi 667699636 344 NLALCGMPFLAGFYSKDMILE 364
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYE 406
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-364 |
3.29e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 111.97 E-value: 3.29e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 47 TFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNhinrFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYF 126
Cdd:PRK07234 62 TLRADALSGYFILTNALVTLAVIFYCWESAKTRF----FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYP 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 127 QNIKSYNAGM-LTALSNrIGDVALLLSIAwmLNYGSWNYIFYLEIMQNEFEMLmigSLVMLAAMTKSAQIPFSSWLPAAM 205
Cdd:PRK07234 138 RTDRAIWVGLrYLFYSN-VAMLFYLIGAV--LVYQANGTFAFSGLATADPEAF---ALIALGLLVKGGIFVSGLWLPLTH 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 206 AAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSWlgQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILS 285
Cdd:PRK07234 212 SEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLD--LIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPL 289
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 667699636 286 MGflklaMFHLLTHALFKALLFMCAGAiIHNMNNSQDIRLMGGLSIHMPLTSACFNVSnlalcGMPFLAGFYSKDMILE 364
Cdd:PRK07234 290 VG-----GLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTMASFSIA-----GFPLLAGFVSKVLTLK 357
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-378 |
1.08e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 107.59 E-value: 1.08e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 18 LLSLYFLLNDMIyfiEWELVSLNSMSIvmTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDN--HINRFIMLVLMFVLS 95
Cdd:PRK06589 54 LIDLLFLKGIRA---QFELMDFGNYSI--GLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILI 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 96 MMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGmLTALSNRIGDVALLLSIAWMLNYGSWNYIFYLEIMQNEF 175
Cdd:PRK06589 129 GVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSK 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 176 EMLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-----FNIILSTSWLGQLMLL--LS 248
Cdd:PRK06589 208 NQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKillyiFGLSYLQRIFAEFNWLifIP 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 249 GLTMFMAGLGANFEFDLKKIIALSTLSQLGLMM---SILSMGFLKLAMFHLLTHALFKALLFMCAGAIIhNMNNSQDIRL 325
Cdd:PRK06589 288 IVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsaFILTPKALGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDK 366
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 667699636 326 MGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFL 378
Cdd:PRK06589 367 LHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIV 419
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
17-443 |
2.39e-24 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 107.39 E-value: 2.39e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 17 FLLSLYFLLNDMiyfiEWELVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHInrFIMLVLMFVLSM 96
Cdd:PRK08668 38 FLIKLYFTLKVG----TGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAY--FNMFALMSLAGV 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 97 MLLIISPNLISILLGWDGLGLVSYcLVIYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLN-YGSWNYIFYLEIMQNE- 174
Cdd:PRK08668 112 LGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLINDt 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 175 -FEMLMIGSLVMLAA-MTKSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVY-------------LLIRFNIILSTS 238
Cdd:PRK08668 191 sTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYgfllvlyvlpgtkLFSEFGTYRGVP 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 239 WLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILSMGFLKLA--MFHLLTHALFKALLFMCAGAIIH 315
Cdd:PRK08668 270 LFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGyILVGLGLGTSLGFAggLFHVFNHALFKGLFFLIFAAVIY 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 316 NMNNSQdIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVsISNVNMFSFFLYYFSTGLTVSYSFRLVY 395
Cdd:PRK08668 350 RTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL-ISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 667699636 396 YSMTGDLNcGSLNMLNDESWIMLRGMMGLLIMSIIGGsmlnwlIFPFP 443
Cdd:PRK08668 428 GVFLGQLP-SDHKDVKEAPLPMLIPMAILVLLNVVFG------VAPGL 468
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
53-311 |
2.78e-24 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 106.71 E-value: 2.78e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 53 MSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFImLVLMFVL-SMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKs 131
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYV-RALAGVLaAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 132 ynAGMLTA----LSNRIGDVALLLSIA-WMLNYGSWnyiFYLEIMQNEFEMLMIGS------LVMLAAMTKSAQIPFSSW 200
Cdd:PRK08168 148 --FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSL---SLSALWAHLAAQGASPSlqaaalLLVLAVILKTAQLPVHGW 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 201 LPAAMAAPTPVSALVHSStLVTAGVYLLIRFNIILSTSWLGQLMLLL-SGLTMFMAGLGANFEFDLKKIIALSTLSQLGL 279
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLvGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
250 260 270
....*....|....*....|....*....|..
gi 667699636 280 MMSILSMGFLKLAMFHLLTHALFKALLFMCAG 311
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
140-358 |
3.18e-24 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 106.92 E-value: 3.18e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 140 LSNRIGDVALLLSIAWMLNY-GSWNYIFYLEIMQNEFEMLMIGSLVMLA----AMTKSAQIPFSSWLPAAMAAPTPVSAL 214
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAATANLDPLTATLLGLAliagPTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 215 vHSSTLVTAGVYLLIRFNIILSTS-WLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAM 293
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLALSpVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIAL 336
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 667699636 294 FHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYS 358
Cdd:PRK07390 337 LLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-395 |
3.93e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 106.21 E-value: 3.93e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 51 DWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIK 130
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 131 -SYNAGMLTALSNRIGDVALLLSIAWMLN-YGSWN--------YIFYLEIMQNEFEMLMIGSLVMLAAMT-----KSAQI 195
Cdd:PRK12667 161 dAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNmadlsakiRGLSFPLTGGLAGNPPLALGVALALALwaftiKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 196 PFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF-------NIILST--SWLGQLMLLLSGLTMFMAGLGANFEFDL 265
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgiSPSLIDfrAALSPILIILGAVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 266 KKIIALSTLSQLGLMMSILSMGF---LKLAMFHLLTHALFKALLFMCAGAIIHNMNnSQDIRLMGGLSIHMPLTSACFNV 342
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 667699636 343 SNLALCGMPFLAGFYSKDMILEIVSISNVNMFSFFLYYFSTgLTVSYSFRLVY 395
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASA-ISLVGYFRAWY 450
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
44-370 |
9.32e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 104.79 E-value: 9.32e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 44 IVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLV 123
Cdd:PRK08376 82 IRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALV 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 124 IYFQNI-KSYNAGMLTALSNRIGDVALLLSIAWML-NYGSWNYIFYLEIMQNEFEMLMIGSLVMLAA--MTKSAQIPFSS 199
Cdd:PRK08376 162 AFRNDTwEAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSENPTVVAKIALALFIAglAMKSGAVPVHM 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 200 WLPAAM-AAPTPVSALVHSSTLvtAGVYLLIR-----FNIILSTSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALST 273
Cdd:PRK08376 242 WLPDAYpAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHS 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 274 LSQLGLMMSILSMGFLKL---------------AMFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSIHMPLTSA 338
Cdd:PRK08376 320 VSQIGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTI 398
|
330 340 350
....*....|....*....|....*....|..
gi 667699636 339 CFNVSNLALCGMPFLAGFYSKDMILEIVSISN 370
Cdd:PRK08376 399 AFLIGAAAIVGLPPFNGFASKWLIYESSALFN 430
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
144-432 |
1.89e-21 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 97.46 E-value: 1.89e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 144 IGDVALLLSIAWMLNYGSWNYIFYLEIMQNEFEM---LMIGSLVMLAAMTKSAQIPFSSWLP-AAMAAPTPVSALvHSST 219
Cdd:COG1008 172 AGSLLMLVAILALYFLAGALTFDIAELAAAPLPLtaqLLLFLAFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGV 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 220 LVTAGVYLLIRFNIIL---STSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSILSMGFLKL--AM 293
Cdd:COG1008 251 LLKMGGYGLLRFALPLfpeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVlLGIFALNPLGLqgAV 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 294 FHLLTHALFKALLFMCAGAIIHNMNnSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILeiVSISNVNM 373
Cdd:COG1008 331 LQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL--LGAFQVNP 407
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 667699636 374 FSFFLYYFSTGLTVSYSFRLVYYSMTGDLNcGSLNMLNDESWIMLRGMMGLLIMSIIGG 432
Cdd:COG1008 408 WLAILAALGLILTAAYLLWMYQRVFFGPLK-EELAELPDLNPRELAVLAPLAALILLLG 465
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
36-318 |
1.77e-20 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 94.72 E-value: 1.77e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 36 LVSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWdGL 115
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCW-GA 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 116 GLVSYCLVIYFQNI--KSYNAGMLTALSNRIGDVALLLSIAWM-LNYGSWNYIFYLE----IMQNEFEMLMIGSLVMLAA 188
Cdd:PRK08601 135 TLLGLTLLIGLNKGwkVAREAAKISGMLFLISWLALALAIVWLfIATGEWQLTSVLSnenlAQLGTWEKTGINLLLILAV 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 189 MTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFNIILSTSWLGQLMLLLSGLTMFMaGLGANF-EFDLKK 267
Cdd:PRK08601 215 MIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLI-GTGISLvQVDYKR 292
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 667699636 268 IIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMN 318
Cdd:PRK08601 293 QLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
56-395 |
7.76e-20 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 92.91 E-value: 7.76e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 56 LFMSFVLMISSLVIFYSKEyMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAG 135
Cdd:PRK08377 82 LFVLIIAIVSFIMSIFSLK-AVEVEPIDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEAS 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 136 MLTALSNRIGDVALLLSIAwmLNYGSWNYIFYLEIMQNEFEM----LMIG-SLVMLAAMTKSAQIPFSSWLPAA-MAAPT 209
Cdd:PRK08377 161 MKYIVLGGIGSSFFLIGVA--LIYGATGTLNMAHIAQLAGTIdptvAQVGlALLIFGLAVEAELFPLNAWAPDAyQAAPH 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 210 PVSALVhSSTLVTAGVYLLIRFNIILS--TSWLG--QLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILS 285
Cdd:PRK08377 239 PITVMF-SAFVVKAGLYAMARILYLMQnaNGWSSvlKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALA 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 286 MGF---LKLAMFHLLTHALFKALLFMCAGAIIHNMNnSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMI 362
Cdd:PRK08377 318 LGTqagVDAGVFHMINHAIVKALLFLAVGYVGITLG-GTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRI 396
|
330 340 350
....*....|....*....|....*....|...
gi 667699636 363 LeIVSISNVNMFSFFLYYFSTGLTVSYSFRLVY 395
Cdd:PRK08377 397 I-LAGLSAGYTWPVALVLGASVVEAVYYFRLIH 428
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
47-359 |
8.39e-20 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 92.49 E-value: 8.39e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 47 TFLFDWMSLLFMSFVLMISSLVIFYSKEYMmNDNHINR--FIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLV- 123
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYL-ERRGLLRgeFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVa 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 124 IYFQNIKSYNAGM----LTALSNRIgdvaLLLSIAWMLNY-GSWNY---IFYLEIMQNEFEMLMIGSLVMLAAMT-KSAQ 194
Cdd:COG1007 144 FRRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtGSLNLagiAAALAAGGANSPLLLLGLVLVLAGLAfKLSA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 195 IPFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRFNII----LSTSWLgQLMLLLSGLTMFMAGLGANFEFDLKKI 268
Cdd:COG1007 220 VPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEafpgLAADWQ-LLLAVLAVLSMTVGNLAALAQTNVKRM 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 269 IALSTLSQLGLMMSILSMGF---LKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNL 345
Cdd:COG1007 297 LAYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLL 376
|
330
....*....|....
gi 667699636 346 ALCGMPFLAGFYSK 359
Cdd:COG1007 377 SLAGIPPTAGFFGK 390
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
105-363 |
8.66e-19 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 89.95 E-value: 8.66e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 105 LISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNY-GSWNYIFYLEIMQNEFEMLMIGSL 183
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAEtGSFAFGAIAGLGGTAAWLILIGFG 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 184 VmlaamtKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRfniilstSWLGQLMLLLSGLTMFMAGLG-ANFE 262
Cdd:PRK12668 195 V------NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR-------AFPGTELLIYIGAAMAVYGVFfALLE 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 263 FDLKKIIALSTLSQLGLMMSILSMGF---LKLAMFHLLTHALFKALLFMCAGAIIHnMNNSQDIRLMGGLSIHMPLTSAC 339
Cdd:PRK12668 262 NDLRRLLSYHIVSQVGYMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRSMPLTALF 340
|
250 260
....*....|....*....|....
gi 667699636 340 FNVSNLALCGMPFLAGFYSKDMIL 363
Cdd:PRK12668 341 CLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
47-359 |
1.16e-15 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 79.48 E-value: 1.16e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 47 TFLFDWMSLLFMSFVLMISSLVIFYSKEYMmNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIY- 125
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYL-EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 126 FQNIKSYNAGM----LTALSNRIgdvaLLLSIAwmLNYG-----SWNYIFYLEIMQNEFEMLMIGSLVMLAA--MTKSAQ 194
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALASGF----LLYGMS--LLYGatgslSFAGIAKALADGSGNSLLLLFGLVFLLVglAFKLSA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 195 IPFSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRF--NIILSTSWLGQLML-LLSGLTMFMAGLGANFEFDLKKIIA 270
Cdd:PRK05777 221 VPFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLlvVAFGGLSEDWQQVLaIIAIASMLVGNLAALSQTNIKRLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 271 LSTLSQLGLMM---SILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLAL 347
Cdd:PRK05777 300 YSSIAHAGYLLvglAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSL 379
|
330
....*....|..
gi 667699636 348 CGMPFLAGFYSK 359
Cdd:PRK05777 380 AGIPPTAGFWGK 391
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
51-439 |
1.76e-15 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 79.21 E-value: 1.76e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 51 DWMSLLFMSFVLMISSLVIFYSKEYMmnDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIK 130
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESI--QKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 131 SYNAGMLTALSNRIGDVALLLSIAWM--LNYGSWNYIFYLEIMQNEFEMLMIGSLVMLAAMTKSAQIPFSSWLPAAMA-A 207
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 208 PTPVSALVhSSTLVTAGVYLLIRFNIIL---STSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGL-MMSI 283
Cdd:TIGR01972 234 PTAGSVIL-AGVLLKMGTYGFLRFNLPLfpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 284 LSMGFLKL--AMFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDM 361
Cdd:TIGR01972 313 FSFNELGIsgAVFQMISHGLITAALFLLVGVLYERA-HTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 667699636 362 ILeiVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTGDLNCGSLNMLNDESWIMLRGMMGLLIMSIIGGSMLNWLI 439
Cdd:TIGR01972 392 IL--LGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLL 467
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
149-356 |
4.52e-15 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 78.33 E-value: 4.52e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 149 LLLSIA-WML--NYGSWNyifyLEIMQNEFEMLMIGSLVMLAAMTK----SAQIPFSSWLPAAMA-APTPVSALVhSSTL 220
Cdd:PRK08042 148 LLLAIAcWLLwqRYGTLD----LRLLDMRMQQLPLGSDIWLLGVIGfgllAGIIPLHGWVPQAHAnASAPAAALF-STVV 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 221 VTAGVYLLIRFNIILSTS--WLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLA------ 292
Cdd:PRK08042 223 MKIGLLGILTLSLLGGNAplWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpal 302
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 667699636 293 --------MFHLLTHALFKALLFMCAGAIIHNMNNsQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGF 356
Cdd:PRK08042 303 ialglvggLYHLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
171-363 |
1.12e-14 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 76.53 E-value: 1.12e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 171 MQNEFEMLMIGSLVMLAAMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIIL---STSWLGQLMLLL 247
Cdd:PRK12663 200 MGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqERELLHPLLATM 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 248 SGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMM---SILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHnMNNSQDIR 324
Cdd:PRK12663 279 AAITMVIGALGALAYKDIRRIAGYQVISSIGFILlglALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQ 357
|
170 180 190
....*....|....*....|....*....|....*....
gi 667699636 325 LMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMIL 363
Cdd:PRK12663 358 YLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-432 |
1.40e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 76.31 E-value: 1.40e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 49 LFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQN 128
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 129 IKSYNAGMLTALSNRIGDVALLLSIAWMLNY-GSWNYIFYLEIMQNEF--EMLMIGSL-VMLAAMTKSAQIPFSSWLPAA 204
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGATFYLIGIGFLYAItGTLNMGDMFLIIQDLPtnRAIQIGVLfIMVGLFIKAALFPFHKWLIQA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 205 MAAPTPVSALVHSSTLVTAGVYLLIRF-------NIILSTSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQL 277
Cdd:PRK12662 236 YSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHI 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 278 G---LMMSILSMGFLKLAMFHLLTHALFKALLFMCAGAIIHNMNNSqDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLA 354
Cdd:PRK12662 316 GyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTT-KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTS 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 355 GFYSKDMILEIVSISNVnMFSFFLYYFSTGLTVSYSFRLV---YYSMTGDLNCgSLNMLNDESWIMLRGMMGLLIMSIIG 431
Cdd:PRK12662 395 GFVAKWYILDAFIKSNA-WIGLVVLLVGSGLSVIYVWKIVealYFESRMVESK-ANDKAFKTPNAMVLCIWIMAILSIIV 472
|
.
gi 667699636 432 G 432
Cdd:PRK12662 473 G 473
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
180-364 |
2.71e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 75.37 E-value: 2.71e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 180 IGSLVMLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIR-FNIILS--TSWLGQLMLLLSGLTMFMA 255
Cdd:PRK07691 211 VAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARtFTLFFShdTSFTHYLILILALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 256 GLGANFEFDLKKIIALSTLSQLGLMMSILSMGF---LKLAMFHLLTHALFKALLFMCAGAIIHnMNNSQDIRLMGGLSIH 332
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTesgMIGAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKR 368
|
170 180 190
....*....|....*....|....*....|..
gi 667699636 333 MPLTSACFNVSNLALCGMPFLAGFYSKDMILE 364
Cdd:PRK07691 369 YPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
178-364 |
3.54e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 71.92 E-value: 3.54e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 178 LMIGSLVMLAAMTKSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFNIILSTS-WLGQLMLLLSGLTMFMA 255
Cdd:PRK12665 209 TALFAVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGgGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 256 GLGANFEFDLKKIIALSTLSQLGLMMSILSMGF---LKLAMFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSIH 332
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKA 366
|
170 180 190
....*....|....*....|....*....|..
gi 667699636 333 MPLTSACFNVSNLALCGMPFLAGFYSKDMILE 364
Cdd:PRK12665 367 SPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
195-426 |
4.08e-13 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 71.77 E-value: 4.08e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 195 IPFSSWLPAAMA-APTPVSALvHSSTLVTAGVYLLIRFNIIL---STSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIA 270
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSLPLfpdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 271 LSTLSQLG-LMMSILSMGFLKL--AMFHLLTHALFKALLFMCAGAIIHNMNnSQDIRLMGGLSIHMPLTSACFNVSNLAL 347
Cdd:PRK05846 307 YSSISHMGfVTLGIFAGNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 348 CGMPFLAGFYSKDMILeiVSISNVNMFSFFLYYFSTGLTVSYSFRLVYYSMTGDLNCGSLNM--LNDESWIMLRGMMGLL 425
Cdd:PRK05846 386 LGLPGTSGFVGEFLIL--LGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLkdLNGRELLILLPLVALL 463
|
.
gi 667699636 426 I 426
Cdd:PRK05846 464 L 464
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
190-363 |
4.49e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 71.50 E-value: 4.49e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 190 TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNIILS----TSWLGQLMLLLSGLTMFMAGLGANFEFD 264
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDaaigSDFPGRLLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 265 LKKIIALSTLSQLGLMMSILSMG---FLKLAMFHLLTHALFKALLFmCAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFN 341
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGgplGIFAALLHMLNHSLTKSAIF-FASGNVLQKYGTRDINVIRGLLKVSPLTGWGLM 383
|
170 180
....*....|....*....|..
gi 667699636 342 VSNLALCGMPFLAGFYSKDMIL 363
Cdd:PRK06458 384 LGALAIAGMPPFGVFISEFLIL 405
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
5-359 |
5.67e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 65.03 E-value: 5.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 5 SFVNLISMSLSCFLLSLYFLLndmiyfIEWELVSLNSMSivMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDN-HIN 83
Cdd:CHL00049 40 DIPWLYFISSTSLVMSITALL------FQWREEPMISFS--GNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEmAIT 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 84 RFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYF-QNIKSYNAGMLTALSNRIGDVALLLSIAWMlnYG-S 161
Cdd:CHL00049 112 EFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKDVRSNEATMKYLLMGGASSSILVYGFSWL--YGlS 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 162 WNYIFYLEIMQNEFEMLMIGSLVMLAAMT--------KSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIR-F 231
Cdd:CHL00049 190 GGEIELQEIVNGLINTQMYNSPGISIALIfitvgigfKLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRiF 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 232 NII---LSTSWlgQLML-LLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFkaLLF 307
Cdd:CHL00049 269 DIPfyfSSNEW--HLLLeILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIF 344
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 667699636 308 MCAGA----IIHNMNNSQD-IRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSK 359
Cdd:CHL00049 345 MNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
182-363 |
1.02e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.01 E-value: 1.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 182 SLVMLAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNIILSTSWLG-QLMLLLSGLTMFMAGLGA 259
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAeQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 260 NFEF---DLKKIIALSTLSQLGLMMSILSMGF---LKLAMFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSIHM 333
Cdd:PRK08676 289 FSMLsqrNLKKLIAFSSIEHMGLMLLGIGIGTplaLFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190
....*....|....*....|....*....|
gi 667699636 334 PLTSACFNVSNLALCGMPFLAGFYSKDMIL 363
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
39-364 |
3.43e-09 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 59.27 E-value: 3.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 39 LNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFyskEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLV 118
Cdd:PRK06277 59 VNGYHSGITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIV 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 119 SYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNY-GSWNY--IFYLEIMQNEFEMLMIGSLVMLAAMTKSAQI 195
Cdd:PRK06277 136 QVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNItdIHNALLVNPTSPVIYGGLLLLIFGLLYGSGL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 196 PFSSWLPAAMAAPTP--VSALVHSSTLVTAGVYLLIRFNIILSTSWLGQ---LMLLLSGLTMFMAGLGANFEFDLKKIIA 270
Cdd:PRK06277 216 PPFHTIKSDIYAKAKpfGSALLQTFSKFVLVALMLVIFKLFGGLSYFPSaqgVLIALSVLAMVFGVVMALLQTDYKRLLA 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 271 LSTLSQLGLMMSILSMGF---LKLAMFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLAL 347
Cdd:PRK06277 296 YHAISQGGYVAAGLALGTplgIVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAI 374
|
330
....*....|....*..
gi 667699636 348 CGMPFLAGFYSKDMILE 364
Cdd:PRK06277 375 SGVPPFNGFQSKLMLAQ 391
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
191-362 |
5.49e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 55.42 E-value: 5.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 191 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNI-ILSTS--WLGQLMLLLSGLTMFMAGLGANFEFDLK 266
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVqMLPDAhvYFAPALAILGVVNIIYGALNAFAQDNVK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 267 KIIALSTLSQLGLMM----SILSMGfLKLAMFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSIHMPLTSACFNV 342
Cdd:PRK12561 277 RRLAYSSVSHMGFVLlgiaAFTDLG-ISGAMLQMISHGLIAAALFFLTG-VTYERTHTLSIPNMGGLAKVMPKTFALFTA 354
|
170 180
....*....|....*....|
gi 667699636 343 SNLALCGMPFLAGFYSKDMI 362
Cdd:PRK12561 355 SSMASLALPGMSGFVSELTV 374
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
57-311 |
8.08e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 51.71 E-value: 8.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 57 FMSFVLMISSLVIFYSKEYMMNDNHINRFI-MLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYcLVIYFQNIKSYNAG 135
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLsSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSY-VAIALTKKNKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 136 MLTALSNrigdvallLSIAWMLNYGSWNYIFYLEIMQNEFEMLMIGSLVMLAAMTKSAQIPF--SSWLPAAMA-APTPVS 212
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 213 AlVHSSTLVTAGVYLLIRFNIILSTS---WLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM--- 286
Cdd:PRK06459 196 A-ILSATMTLMGVYGILKMTILTQTIpigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymv 274
|
250 260 270
....*....|....*....|....*....|....*
gi 667699636 287 ----------GFLKLAMFHLLTHALFKALLFMCAG 311
Cdd:PRK06459 275 tkqlitsiehFSLITVILYSFAHSVAKTGLFLSSG 309
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
175-362 |
1.87e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 50.48 E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 175 FEMLMIGSLvMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIIL---STSWLGQLMLLLSGLT 251
Cdd:PRK02546 211 FQLLCYAGL-LIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMlpdAHAQFAPLLIVLGVVN 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 252 MFMAGLGANFEFDLKKIIALSTLSQLGLMM----SILSMGfLKLAMFHLLTHALFKALLFMCAGAIiHNMNNSQDIRLMG 327
Cdd:PRK02546 290 IIYAALTSFAQRNLKRKIAYSSISHMGFVLigigSFTDLG-TSGAMLQMISHGLIGASLFFLVGAT-YDRTHTLMLDEMG 367
|
170 180 190
....*....|....*....|....*....|....*
gi 667699636 328 GLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMI 362
Cdd:PRK02546 368 GVGQKMRKMFAMWTACSLASLALPGMSGFVAELMV 402
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
37-85 |
2.63e-06 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 44.34 E-value: 2.63e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 667699636 37 VSLNSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHINRF 85
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
46-391 |
2.69e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 50.31 E-value: 2.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 46 MTFLFDWMSLLFM---SFVLMISSLVIFYSKEYMMNDNHInrfIMLVLMFVLSMMLLIISPNLISILlgWDGLGLVSYCL 122
Cdd:MTH00226 96 LVFAVDGISIYFIiltGFIVPCSILISWHSVKYLTKSFLI---CMLILEFLLYAVFSVLDIFMFYIL--FEGVLIPMYLI 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 123 V-IYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLN-YGSWNYIFYLE----IMQNEFEMLMIGslVMLAAMTKSAQIP 196
Cdd:MTH00226 171 LgIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNiHGTTDYLTLAScshvVSEQTQKWIFLG--IFLAMAVKIPIFP 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 197 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN---IILSTSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALST 273
Cdd:MTH00226 249 FHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwpiLPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSS 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 274 LSQLGLM-MSILSMGFLKL--AMFHLLTHALFKALLFMCAgAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGM 350
Cdd:MTH00226 329 VAHMGLVsITLVTHDIIGLtgSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAV 407
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 667699636 351 PFLAGFYSKdmILEIVSISNVNMFSFFLYYFSTGLTVSYSF 391
Cdd:MTH00226 408 PPSGNFIGE--YLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
40-359 |
1.05e-05 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 48.12 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 40 NSMSIVMTFLFDWMSLLFMSFVLMISSLVIFYSKEYM-MNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLV 118
Cdd:PRK02504 66 NPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVeQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 119 SYCLVIYFQNIKSYNAGMLTALSNRIGDVALLL---SIAWMLNYGSWNYIFYLEIMQNEFEMLMIGSLVMLAAMT--KSA 193
Cdd:PRK02504 146 SYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLygsSLLYGLSGGSTQLSAIALALITSPSLGLALALVFVIAGIafKIS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 194 QIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNIILSTSWLGQLMLL---LSGLTMFMAGLGANFEFDLKKII 269
Cdd:PRK02504 226 AVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRLLVTAFPSFDEQWKLLftaLAILSMVLGNVVALAQTSMKRML 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 270 ALSTLSQLGLMMSILSMGF---LKLAMFHLLTHalfkalLFMCAGA----IIHNMNNSQD-IRLMGGLSIHMPLTSACFN 341
Cdd:PRK02504 305 AYSSIGQAGFVMIGLVAGTeagYASMVFYLLAY------LFMNLGAfacvILFSLRTGTDqISDYAGLYQKDPLLTLGLS 378
|
330
....*....|....*...
gi 667699636 342 VSNLALCGMPFLAGFYSK 359
Cdd:PRK02504 379 LCLLSLGGIPPLAGFFGK 396
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
144-356 |
6.80e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 45.43 E-value: 6.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 144 IGDVALLLSIAWMLNY-GSWNY--IFYLEIMQNEFEMLMIGSLVMLAamTKSAQIPFSSWLPAAMAAPTPVSALVHSSTL 220
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYqaLCCLKIEKELQYFIFLGFFLSLA--IKIPKIPFHIWLPQAHVEAPVAGSVILAGVL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 221 VTAGVYLLIRFNIIL---STSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSILSMGFLKL--AMF 294
Cdd:MTH00217 249 LKLGGYGFIRFSWPLlpeASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVtLGIFSHTIQGLvaAIF 328
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 667699636 295 HLLTHALFKALLFMcAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGF 356
Cdd:MTH00217 329 LMLAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNF 389
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
177-362 |
7.78e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 45.46 E-value: 7.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 177 MLMIGSLVMLAamTKSAQIPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFNI-ILSTSW--LGQLMLLLSGLTM 252
Cdd:PRK06473 206 LLLAPILVGFG--IKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVgLFPEAWvyLAPWLATWAVVSV 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 253 FMAGLGANFEFDLKKIIALSTLSQLGLMM---------SILSmgflklAMFHLLTHALFKALLFMCAGaIIHNMNNSQDI 323
Cdd:PRK06473 283 LYGASCAIAQKDMKKMVAYSSIGHMGYILlaaaaatplSILA------AVFQMISHGLISALLFLLVG-VVYKKTGSRDV 355
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 667699636 324 RLMGGL---SIHMPLTSACFNVSNLALCGMPFLAGFYSKDMI 362
Cdd:PRK06473 356 DVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
4-411 |
7.91e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 45.32 E-value: 7.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 4 ISFVNLISMSLSCFLLSLYFLLNDMIYFIEWELVSLNSMSIVMTFL-FDWMSLLFMSFVLMISSLVIFYSKEYMMNDNHI 82
Cdd:MTH00206 10 LLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLsYDPLSSPLVILSCWLLPLMFLASQNHMKNEPIN 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 83 NR--FIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKS-YNAGMLTALSNRIGDVALLLSIAWMLNY 159
Cdd:MTH00206 90 RQriYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKErLNAGYYFLFYTLIGSLPLLIALLFLQNS 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 160 GSWNYIFYLEIMQNEFEMLMIGSLVMLAA-MTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIIL--S 236
Cdd:MTH00206 170 LGSLSLYILYFSKLTTWNNNLWWLACILAfLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILgpS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 237 TSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGF---LKLAMFHLLTHALFKALLFmCAGAI 313
Cdd:MTH00206 250 TKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSpwgFKGALLLMIAHGLVSSALF-CLANL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 314 IHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMIleIVSISNVNMFSFFLYYFSTGLTVSYSFRL 393
Cdd:MTH00206 329 LYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLI--ITSLFSWSNFTLPLLGLGFLFTAIYSLYM 406
|
410
....*....|....*...
gi 667699636 394 VYYSMTGDLNCGSLNMLN 411
Cdd:MTH00206 407 FVMTQHGKTPNHLLSLSP 424
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
145-362 |
1.90e-04 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 44.17 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 145 GDVALLLSIAWMLNYGSWNYIFYLEIMQNE-----FEMLM-IGSLVMLAAmtKSAQIPFSSWLPAAMAAPTPVSALVHSS 218
Cdd:CHL00011 174 GSIFLLIGVLGMGLYGSNEPTLNFETLANQsypvaLEILFyIGFLIAYAV--KLPIIPLHTWLPDTHGEAHYSTCMLLAG 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 219 TLVTAGVYLLIRFNIILST---SWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMM----SILSMGfLKL 291
Cdd:CHL00011 252 ILLKMGAYGLIRINMELLPhahSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIigigSITDTG-LNG 330
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 667699636 292 AMFHLLTHALFKALLFMCAGAiihnmnnSQD-IRL-----MGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMI 362
Cdd:CHL00011 331 AILQIISHGFIGAALFFLAGT-------SYDrIRLvyldeMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
195-364 |
2.34e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 43.93 E-value: 2.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 195 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIIL---STSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIAL 271
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLfpqTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 272 STLSQLGLMMSILSMGF---LKLAMFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSI---HMPLTSACFNVSNL 345
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTqlsLLGAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMNpirGLPLTSALLVLAGM 380
|
170
....*....|....*....
gi 667699636 346 ALCGMPFLAGFYSKDMILE 364
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQ 399
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
183-364 |
4.04e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 42.89 E-value: 4.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 183 LVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILSTSwlgqLMLLLSGLTMFMAGLGANFE 262
Cdd:MTH00112 97 LLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT----LLLTLAILSTLIGGWGGLNQ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 263 FDLKKIIALSTLSQLGLMMSILSMGfLKLAMFHLLTHALFKALLFMcagaiIHNMNNSQDIRLMGGLSIHMPLTSACFNV 342
Cdd:MTH00112 173 TQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTLML 246
|
170 180
....*....|....*....|..
gi 667699636 343 SNLALCGMPFLAGFYSKDMILE 364
Cdd:MTH00112 247 TLLSLAGLPPLTGFMPKWLILQ 268
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
144-358 |
4.10e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 43.13 E-value: 4.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 144 IGDVALLLSIAWML-NYGSWNYIFYLEIMQNEFEMLMIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 222
Cdd:MTH00204 174 AGSVFMLLGIFQLYsITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLK 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 223 AGVYLLIRFNIIL---STSWLGQLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSIL---SMGFLKLAMFHL 296
Cdd:MTH00204 254 LGGYGFLRFSWPLfpaASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLM 333
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 667699636 297 LTHALFKALLFMcAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMP----FLAGFYS 358
Cdd:MTH00204 334 LAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPlscnFVGEFFS 398
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
185-390 |
5.21e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 42.64 E-value: 5.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 185 MLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNIILS--TSWLGQLMLLLSGLTMFMAGLGANFE 262
Cdd:MTH00127 201 LLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDplTKELSYPFIILALWGIIMTGSICLRQ 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 263 FDLKKIIALSTLSQLGLMMS---ILSMGFLKLAMFHLLTHALFKALLFmCAGAIIHNMNNSQDIRLMGGLSIHMPLTSAC 339
Cdd:MTH00127 281 TDLKSLIAYSSVSHMGLVAGgilIQTPWGFTGALILMIAHGLTSSALF-CLANTNYERTHSRTMLLARGLQMILPLMATW 359
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 667699636 340 FNVSNLALCGMPFLAGFYSKDMIleIVSISNVNMFSFFLYYFSTGLTVSYS 390
Cdd:MTH00127 360 WFIASLANLALPPLPNLMGELMI--ITSLFNWSPWTLALTGLGTLITAGYS 408
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
91-419 |
9.91e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 41.55 E-value: 9.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 91 MFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQN-IKSYNAGM----LTALSNR--IGDVALLLSIAWMLNYGSWN 163
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGsGYSAEAGLkyfvLGALSSGlfLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 164 YIFYLEIMQNEFEMLMIGSLVMLAAMTKSAQIPFSSWLPAAM-AAPTPVSALVhsSTLVTAGVyllirFNIILSTSWLGQ 242
Cdd:MTH00196 81 LVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYeGAPTKTTALL--AIVPKLGI-----FSILVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 243 LMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFkALLFMCAGAIIHNMNNSQD 322
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIY-IIMSICVFSIILALNVYKN 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 323 -IRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILeIVSISNVNMFSFFLYYFSTGLTVSYSFRLV--YYSMT 399
Cdd:MTH00196 233 lIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL-LSGVVYQYYLIFLLAVFCSVIAGVYYVRIVkiLFFQA 311
|
330 340
....*....|....*....|
gi 667699636 400 GDLNCGSLNMLNDESWIMLR 419
Cdd:MTH00196 312 NSFLLISTKILKKENKINLR 331
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
12-397 |
1.94e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 40.87 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 12 MSLSCFLLSLYFLLNDMIyFIEWELVSLNSMSIVmtFLFDWMSLLFMSFVLMISSLVIFYSKeymmndNHINRFIMLVLM 91
Cdd:PRK12664 1 MTMVLYAISLYGFFFGLI-FIVLPLLLYDWSEPV--YNLDLVLFIVLSFSLALIFLYILPIK------NMRFSEMLCYLL 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 92 FVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLSIAWMLNYGSWNYIFYLeim 171
Cdd:PRK12664 72 YYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGYCKL--- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 172 qnefemlmigsLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFniilstsWLGQLMLLLSGL- 250
Cdd:PRK12664 149 -----------LFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLF-------FSGEEILLFLGIi 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 667699636 251 TMFMAGLGANFEFDLKKIIALSTLSQLGLMM-----SILSMGFLKLAMFHLLTHALFKALLFMCAGAIIhNMNNSQDIRL 325
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIiaigfSGSSGVAIGILILQIVLSVVYQTLLFMVADSVI-NRTRKFNLNR 289
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 667699636 326 MGGLsIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEIVSISNVN--MFSFFLYYFSTGLTVSYSFRLVYYS 397
Cdd:PRK12664 290 VGGL-FKMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTlvLYKKLFLICSLLLFASVGLKFFWYA 362
|
|
| |
