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Concise Results
Standard Results
Full Results
putative internal virion protein [Ralstonia phage RSJ2]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
PHA03415 super family
cl46965 putative internal virion protein; Provisional
701-1370
5.38e-17
putative internal virion protein; Provisional
PHA03415 :Pssm-ID: 177643
Cd Length: 1019
Bit Score: 87.00
E-value: 5.38e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 701 GK A RQDYD R A VA L E VNA R ----- RF SSAAD D A ar N V D AHVKAG AD AWERAMERMRAWQQKVQTV G H E AL g T SSR GY MPQK 775
Cdd:PHA03415 347 AD A KDALE R K VA D E LAR R daews RF GAVMA D P -- N L D PDIARL AD ESDAFHGQGAELAKDAGLA G F E DF - T ARP GY FHRA 423
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 776 LDPQ K LLEW E R A GKM G ALENHF A QQFVDQL - G M D EAN A IKV A RDY L GYAKRR A L G - GL D VPAN L HD AD m A DA LE E A L AK A 853
Cdd:PHA03415 424 WNDS K FQAA E D A YEK G IVKKLL A ESIERGI k G L D KDE A DAI A GAI L QRTHDK A A G l RP D FMGA L GK AD - T DA IR E M L EA A 502
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 854 G VYG --- QETIDRFRERFQRG G AGHTKARK L DM D LTGHVLDPKTNQY v PLMEFYST D MSKLYQS Y MGRVT G EV ALA QH G V 930
Cdd:PHA03415 503 G TDA ari ESIMGKIEQKADDA G KSKYGKHR L PL D MSAKIKAKDGRTI - RVADLIDR D LDRIAEN Y GQQLA G RS ALA AA G I 581
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 931 YGSP A - I KSMREAMMHG ------ P Q A ATPAELES FD EFIN D ML G R R G g D G N P g L RTAMSN A RQ LA SMRY L GGMAIT Q A AE 1003
Cdd:PHA03415 582 AADD A g I EAFKGRYLAS ivnakl P D A DIADLMLQ FD GLLG D FT G H R P - D A N I - L GANAQR A KS LA DATM L AASGLW Q V AE 659
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1004 LTQ L VHHL G L ---- NS F M K SI P LFRN L FE ev R AG GGAK L V D QIE - V Y G GY L DAEA R FH f P FEEAGQVR L YGH D S pg IATK 1078
Cdd:PHA03415 660 YAT L AQRH G A aetg AE F F K QF P GIAG L LQ -- K AG RDPD L A D ELH s V L G LD L ARDV R LR - P WKRQHDAF L ESR D T -- LLDR 734
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1079 LIRSAGRQFMHISGHRA IH KF Q MKMAVEQIGV K AL RAA REGATPHHLLADMGFTPEKL A LIREDLPNI A T F DA K g N LRDL 1158
Cdd:PHA03415 735 ILHAGKQATPILNAMKF IH SH Q SRLNANLTLN K FA RAA KGDRKALAEIREYALDDLAW A KAEKAIDDN A E F NG K - N AQEF 813
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1159 DFSKTQ n P A AV AEFIQ A TQ R GARQI I QGHFR G ETGKY A TDT LGQ F L T QFRSF SITSAE K QW R RVATNA G va TA GL YLI gq 1238
Cdd:PHA03415 814 NWDGWA - P D AV DAALN A AA R IMDDA I LYGRA G QGASF A RSQ LGQ I L G QFRSF VSFAHN K LL R GTINAD G -- PK GL ASL -- 888
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1239 M A IAA P IHLA kvh M L A QGKSGSEKKKY LE DNTNPAAF A RSLVN Y SSLT G VMD -- VPLDAMM G VA G AMG AP VGEN A KIGT R 1316
Cdd:PHA03415 889 L A FQY P LTFL --- M V A ANEARKGESLD LE SEAGLKKL A KKAIG Y TAAI G FIG da AGILGLT G GR G GLS AP LLGL A DALG R 965
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 662242615 1317 GIE G WNPTL G YVGQGIRA G - GR llynpsg DTL A KF GKAA lpganl PYLV P MVNI M 1370
Cdd:PHA03415 966 ATG G IAHLA G ISRDTSGE G e GR ------- EAA A DI GKAA ------ RMAL P FLGV M 1007
Lyz-like super family
cl00222 lysozyme-like domains; This family contains several members, including soluble lytic ...
14-119
2.66e-03
lysozyme-like domains; This family contains several members, including soluble lytic transglycosylases (SLT), goose egg-white lysozymes (GEWL), hen egg-white lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, chitosanases, and pesticin. Typical members are involved in the hydrolysis of beta-1,4- linked polysaccharides.
pfam01464 :Pssm-ID: 469668 [Multi-domain]
Cd Length: 114
Bit Score: 39.21
E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 14 AFE A VS K W s G ISVGD L KGVYRV ES ss G TD PKA fqeg V HG pe S T A Y G HF QI TN ST L K GVQEQTGLKI D - RN D FNQSLW A AG 92
Cdd:pfam01464 1 IIK A AQ K Y - G VDPSL L LAIAQQ ES -- G FN PKA ---- V SK -- S G A V G LM QI MP ST A K RLGLRVNPGV D d LF D PEKNIK A GT 71
90 100
....*....|....*....|....*..
gi 662242615 93 YV LK QNMAAFNN D SAM AL G A FKE G TS R 119
Cdd:pfam01464 72 KY LK ELYKQYGG D LWL AL A A YNA G PG R 98
Name
Accession
Description
Interval
E-value
PHA03415
PHA03415 putative internal virion protein; Provisional
701-1370
5.38e-17
putative internal virion protein; Provisional
Pssm-ID: 177643
Cd Length: 1019
Bit Score: 87.00
E-value: 5.38e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 701 GK A RQDYD R A VA L E VNA R ----- RF SSAAD D A ar N V D AHVKAG AD AWERAMERMRAWQQKVQTV G H E AL g T SSR GY MPQK 775
Cdd:PHA03415 347 AD A KDALE R K VA D E LAR R daews RF GAVMA D P -- N L D PDIARL AD ESDAFHGQGAELAKDAGLA G F E DF - T ARP GY FHRA 423
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 776 LDPQ K LLEW E R A GKM G ALENHF A QQFVDQL - G M D EAN A IKV A RDY L GYAKRR A L G - GL D VPAN L HD AD m A DA LE E A L AK A 853
Cdd:PHA03415 424 WNDS K FQAA E D A YEK G IVKKLL A ESIERGI k G L D KDE A DAI A GAI L QRTHDK A A G l RP D FMGA L GK AD - T DA IR E M L EA A 502
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 854 G VYG --- QETIDRFRERFQRG G AGHTKARK L DM D LTGHVLDPKTNQY v PLMEFYST D MSKLYQS Y MGRVT G EV ALA QH G V 930
Cdd:PHA03415 503 G TDA ari ESIMGKIEQKADDA G KSKYGKHR L PL D MSAKIKAKDGRTI - RVADLIDR D LDRIAEN Y GQQLA G RS ALA AA G I 581
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 931 YGSP A - I KSMREAMMHG ------ P Q A ATPAELES FD EFIN D ML G R R G g D G N P g L RTAMSN A RQ LA SMRY L GGMAIT Q A AE 1003
Cdd:PHA03415 582 AADD A g I EAFKGRYLAS ivnakl P D A DIADLMLQ FD GLLG D FT G H R P - D A N I - L GANAQR A KS LA DATM L AASGLW Q V AE 659
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1004 LTQ L VHHL G L ---- NS F M K SI P LFRN L FE ev R AG GGAK L V D QIE - V Y G GY L DAEA R FH f P FEEAGQVR L YGH D S pg IATK 1078
Cdd:PHA03415 660 YAT L AQRH G A aetg AE F F K QF P GIAG L LQ -- K AG RDPD L A D ELH s V L G LD L ARDV R LR - P WKRQHDAF L ESR D T -- LLDR 734
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1079 LIRSAGRQFMHISGHRA IH KF Q MKMAVEQIGV K AL RAA REGATPHHLLADMGFTPEKL A LIREDLPNI A T F DA K g N LRDL 1158
Cdd:PHA03415 735 ILHAGKQATPILNAMKF IH SH Q SRLNANLTLN K FA RAA KGDRKALAEIREYALDDLAW A KAEKAIDDN A E F NG K - N AQEF 813
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1159 DFSKTQ n P A AV AEFIQ A TQ R GARQI I QGHFR G ETGKY A TDT LGQ F L T QFRSF SITSAE K QW R RVATNA G va TA GL YLI gq 1238
Cdd:PHA03415 814 NWDGWA - P D AV DAALN A AA R IMDDA I LYGRA G QGASF A RSQ LGQ I L G QFRSF VSFAHN K LL R GTINAD G -- PK GL ASL -- 888
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1239 M A IAA P IHLA kvh M L A QGKSGSEKKKY LE DNTNPAAF A RSLVN Y SSLT G VMD -- VPLDAMM G VA G AMG AP VGEN A KIGT R 1316
Cdd:PHA03415 889 L A FQY P LTFL --- M V A ANEARKGESLD LE SEAGLKKL A KKAIG Y TAAI G FIG da AGILGLT G GR G GLS AP LLGL A DALG R 965
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 662242615 1317 GIE G WNPTL G YVGQGIRA G - GR llynpsg DTL A KF GKAA lpganl PYLV P MVNI M 1370
Cdd:PHA03415 966 ATG G IAHLA G ISRDTSGE G e GR ------- EAA A DI GKAA ------ RMAL P FLGV M 1007
SLT
pfam01464 Transglycosylase SLT domain; This family is distantly related to pfam00062. Members are found ...
14-119
2.66e-03
Transglycosylase SLT domain; This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
Pssm-ID: 396169 [Multi-domain]
Cd Length: 114
Bit Score: 39.21
E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 14 AFE A VS K W s G ISVGD L KGVYRV ES ss G TD PKA fqeg V HG pe S T A Y G HF QI TN ST L K GVQEQTGLKI D - RN D FNQSLW A AG 92
Cdd:pfam01464 1 IIK A AQ K Y - G VDPSL L LAIAQQ ES -- G FN PKA ---- V SK -- S G A V G LM QI MP ST A K RLGLRVNPGV D d LF D PEKNIK A GT 71
90 100
....*....|....*....|....*..
gi 662242615 93 YV LK QNMAAFNN D SAM AL G A FKE G TS R 119
Cdd:pfam01464 72 KY LK ELYKQYGG D LWL AL A A YNA G PG R 98
Name
Accession
Description
Interval
E-value
PHA03415
PHA03415 putative internal virion protein; Provisional
701-1370
5.38e-17
putative internal virion protein; Provisional
Pssm-ID: 177643
Cd Length: 1019
Bit Score: 87.00
E-value: 5.38e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 701 GK A RQDYD R A VA L E VNA R ----- RF SSAAD D A ar N V D AHVKAG AD AWERAMERMRAWQQKVQTV G H E AL g T SSR GY MPQK 775
Cdd:PHA03415 347 AD A KDALE R K VA D E LAR R daews RF GAVMA D P -- N L D PDIARL AD ESDAFHGQGAELAKDAGLA G F E DF - T ARP GY FHRA 423
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 776 LDPQ K LLEW E R A GKM G ALENHF A QQFVDQL - G M D EAN A IKV A RDY L GYAKRR A L G - GL D VPAN L HD AD m A DA LE E A L AK A 853
Cdd:PHA03415 424 WNDS K FQAA E D A YEK G IVKKLL A ESIERGI k G L D KDE A DAI A GAI L QRTHDK A A G l RP D FMGA L GK AD - T DA IR E M L EA A 502
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 854 G VYG --- QETIDRFRERFQRG G AGHTKARK L DM D LTGHVLDPKTNQY v PLMEFYST D MSKLYQS Y MGRVT G EV ALA QH G V 930
Cdd:PHA03415 503 G TDA ari ESIMGKIEQKADDA G KSKYGKHR L PL D MSAKIKAKDGRTI - RVADLIDR D LDRIAEN Y GQQLA G RS ALA AA G I 581
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 931 YGSP A - I KSMREAMMHG ------ P Q A ATPAELES FD EFIN D ML G R R G g D G N P g L RTAMSN A RQ LA SMRY L GGMAIT Q A AE 1003
Cdd:PHA03415 582 AADD A g I EAFKGRYLAS ivnakl P D A DIADLMLQ FD GLLG D FT G H R P - D A N I - L GANAQR A KS LA DATM L AASGLW Q V AE 659
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1004 LTQ L VHHL G L ---- NS F M K SI P LFRN L FE ev R AG GGAK L V D QIE - V Y G GY L DAEA R FH f P FEEAGQVR L YGH D S pg IATK 1078
Cdd:PHA03415 660 YAT L AQRH G A aetg AE F F K QF P GIAG L LQ -- K AG RDPD L A D ELH s V L G LD L ARDV R LR - P WKRQHDAF L ESR D T -- LLDR 734
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1079 LIRSAGRQFMHISGHRA IH KF Q MKMAVEQIGV K AL RAA REGATPHHLLADMGFTPEKL A LIREDLPNI A T F DA K g N LRDL 1158
Cdd:PHA03415 735 ILHAGKQATPILNAMKF IH SH Q SRLNANLTLN K FA RAA KGDRKALAEIREYALDDLAW A KAEKAIDDN A E F NG K - N AQEF 813
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1159 DFSKTQ n P A AV AEFIQ A TQ R GARQI I QGHFR G ETGKY A TDT LGQ F L T QFRSF SITSAE K QW R RVATNA G va TA GL YLI gq 1238
Cdd:PHA03415 814 NWDGWA - P D AV DAALN A AA R IMDDA I LYGRA G QGASF A RSQ LGQ I L G QFRSF VSFAHN K LL R GTINAD G -- PK GL ASL -- 888
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1239 M A IAA P IHLA kvh M L A QGKSGSEKKKY LE DNTNPAAF A RSLVN Y SSLT G VMD -- VPLDAMM G VA G AMG AP VGEN A KIGT R 1316
Cdd:PHA03415 889 L A FQY P LTFL --- M V A ANEARKGESLD LE SEAGLKKL A KKAIG Y TAAI G FIG da AGILGLT G GR G GLS AP LLGL A DALG R 965
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 662242615 1317 GIE G WNPTL G YVGQGIRA G - GR llynpsg DTL A KF GKAA lpganl PYLV P MVNI M 1370
Cdd:PHA03415 966 ATG G IAHLA G ISRDTSGE G e GR ------- EAA A DI GKAA ------ RMAL P FLGV M 1007
PHA03413
PHA03413 putative internal core protein; Provisional
708-1288
1.56e-09
putative internal core protein; Provisional
Pssm-ID: 177641
Cd Length: 1304
Bit Score: 62.79
E-value: 1.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 708 D R A VALEVNA R RFSSAAD D A A RN VDA HVKA G - A DA W ERAM ermrawq Q K VQTVGHE A L g TS S RG Y M P QKLDPQ K LLEWER 786
Cdd:PHA03413 687 D A A YSADKAG R AIPTPDA D I A PL VDA YRDS G w A EK W HEHL ------- L K AGLIDAD A F - PK S DY Y F P RQYSYD K MRNGIA 758
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 787 A G ---- KMG AL E n H FA Q Q FV d QLG MD EAN A IK VA RD - YL G YAKR RA LG G LDVPA NL HDADMA D A L EE AL AK AGV y GQET I 861
Cdd:PHA03413 759 Q G ield DVK AL F - R FA L Q DT - YPN MD GEL A AR VA DE m VD G IVNG RA GQ G GPMWK NL INGMDN D E L FM AL RD AGV - DDDA I 835
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 862 DR F RERFQRGGAGHTK A R ---- K LD MD L TGHVL - D PKTNQYVPLME fys TD MSK L YQS Y MG R VT G E VA L A QH G VYGSP A I 936
Cdd:PHA03413 836 NE F LAGNVPESGSTAP A K nlrn R LD FN L DKEFD i D GDSLRLQDILD --- TD TAG L MHG Y TN R MS G R VA F A NA G IQDLG A L 912
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 937 KS M REAMM H GPQAATPAELESF D EF I NDM LG RRGG D GN -- P G L RT A MS N arq LA SMRY L GGMAIT Q AAELTQLVHHL GL N 1014
Cdd:PHA03413 913 DK M IDESK H ALADGAESWEKAV D DT I DFI LG GAPA D SG di P E L LR A AG N --- LA NATM L KNSGLY Q LTDIAIAMKEF GL A 989
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1015 SFMKSI --- P LF RNLFEEVRAGGG A KLV D Q I ev YG G YLDA EARF HF pfeeagq VRL Y GH D SPGI ----- A TKLIRSA G RQ 1086
Cdd:PHA03413 990 RVLRGL adq G LF KEADAAIADPDM A ARL D S I -- LN G AIQK EARF RH ------- IHT Y AD D NLDL tnqaa A FNTTQNL G QA 1060
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1087 FM H IS G HRAI H KFQMKMAVEQ I GVKALRAAREG A TPHHL L ADM G F TPE KLALIRE dlpniatfdakgnlrdldf SKTQ NP 1166
Cdd:PHA03413 1061 AR H AN G FSMV H RLMANLNAGI I ADELENMFKGD A EAFKA L EEF G L TPE IADQAIA ------------------- ANAA NP 1121
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1167 A A VAEFIQATQ ------ R GARQII Q GHFR GET GKY A T - DTL G QFLTQFR SF S I TSAE K QW RR VATN A GV A TAGLYLIG Q M 1239
Cdd:PHA03413 1122 G A LFPPDLQME ieivgt R AMDSLM Q NIRT GET SHF A Q f NPI G KIIVGYQ SF A I AATN K IL RR ELND A DW A GLAHIMAY Q F 1201
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 662242615 1240 AIAAPIHL AK VHM la Q GK SGSEK K KYLED ntnpaafar S LVNY S SLT GV 1288
Cdd:PHA03413 1202 PLMLLATH AK HAL -- D GK DADSP K ELISE --------- S ALGM S AIG GV 1239
PHA00368
PHA00368 internal virion protein D
366-1308
3.36e-07
internal virion protein D
Pssm-ID: 222785 [Multi-domain]
Cd Length: 1315
Bit Score: 55.17
E-value: 3.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 366 DY E IN AR GGSVAMT A G L L AG VA dpvgwva G F G AGKVAQ V A MAG R T ---- S L IAR A GFAALENS A A NVA IT G MLDASG G yv 441
Cdd:PHA00368 308 NF E YD AR AAEAGLG A K L S AG II ------- G A G VDPLSY V P MAG V T gkgf K L VNK A LVVGAQSA A L NVA SE G LRTSVA G -- 378
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 442 SDHD Y LM A G L T GA T lgaafgaaakg LDET M ARV S KG V ES ynfslqve A L K R V G PDGTPEQ F QAAMRDI E LERANQRVLTD 521
Cdd:PHA00368 379 GEAH Y AE A A L G GA L ----------- FGGG M SAI S DA V AA -------- G L R R S G ETEVVNE F AGPAMRL E ARETARNAGGE 439
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 522 D VLLA P V S E D QRI S PLA G QEP A TPEARA G VDGAEGNPFITGE NP dlrmevkarhg L DSI T DEAERN V AT E fya RA ERAV K 601
Cdd:PHA00368 440 D LSRM P P S N D RFL S DHN G VPY A DLPTEP G AVVLRDGSILSDS NP ----------- L NPK T LKEFAE V DP E --- RA AKGI K 505
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 602 rnpid L KKV T SL ltklpegvaswlest G VRMA RS Q N PIMQWV A GN L -- S EVST -- G AA G R - QR TAS IL K SQ L -- E D HG ra 674
Cdd:PHA00368 506 ----- L GGF T EI --------------- G LKTL RS E N AEVRGI A SD L vr S PTGM qs G SS G K f GA TAS DI K ER L hs T D QR -- 563
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 675 mwg D YN ANFEMWRK A Q K ----- V G VWD e FTTGK ARQ DYD R A VAL EVNARRFSSAADD A A R N V DAHV K AGA D AWERA ME RM 749
Cdd:PHA00368 564 --- T YN DLYDAMED A M K dpefs T G GAK - MSREA ARQ EIY R R VAL AIERPELQANLTK A E R K V MDIL K EHF D LKREM ME NP 639
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 750 RAW - QQ K VQTV -- G HEAL GT ssrg Y M P QKL D pqkllewe RA G K mgalenhfa QQFVDQ LG MDEANAIKV A RDY L - G Y AK R 825
Cdd:PHA00368 640 AIF g NT K AVSI fp G SRHK GT ---- Y V P HVY D -------- RA A K --------- ALYIQR LG GPDGLQEAI A KSW L t S Y RS R 698
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 826 ----------- RA L G G L DV PANLHDADMAD A LEE A lakagv YG QETI D R F RER -- FQRG ----- G AGHTK --- AR K L - D M 883
Cdd:PHA00368 699 pevkarvdefl KE L H G I DV KEVTPEMVEKY A MDK A ------ YG ISHT D Q F TRS sv IEEN ieglv G IENNS fle AR N L f D S 772
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 884 D LTGHVL D PK T NQYVP L ME F yst DM SKLYQS Y MG RV T G EV A LAQHGVYGSPAI K SMRE A MMH -- GPQAATPA E L E SFDEF 961
Cdd:PHA00368 773 D MSVTLP D GQ T FSVND L RD F --- DM KRIMPA Y DR RV N G DI A IMGGTGKTTKEL K DEIL A LDK ka EGDGKLKG E V E ALKDT 849
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 962 INDML GR RGGDGNPGLR TA MSNARQ L --- A SMR Y L G GMA IT qaa E LTQLVHHLGLNSFMKS IP LF R N L FEEVRAGGGAK L 1038
Cdd:PHA00368 850 VKILT GR ARRNPDTAFE TA LRSLND L sff A KNA Y M G AQN IT --- E IAGMLAKGNVRALLHG IP IL R D L AFRNKPVSASE L 926
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1039 VD - QIEVY G GY LD AEA R fhf P FEE -- AGQV R LYGHDS P GI A ------------------- TKL ------- I RS A G RQ fmh 1089
Cdd:PHA00368 927 KE l HGMLF G KE LD QLI R --- P SRQ di VQRL R ETTDTG P AV A nvvgtlkyatqelaarspf TKL lngttny I LD A A RQ --- 1000
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1090 isghraih KFQMKMAVEQIGV K ALRAAR E G atphh L L ADMGFT PE KL ---- A LIRE D lpni A T FD A K G NLRDL D FSK - TQ 1164
Cdd:PHA00368 1001 -------- GVLGDVVSAALTG K KTKWFK E R ----- F L KSASIS PE QW egik Q LIRE H ---- V T RG A D G KFTIK D KQA f AS 1063
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1165 N P A A VAEFIQ A TQRGARQIIQG H FRGETGKY A TDT L GQFLT QF R SF S I T S AEKQWR R V --- AT NAGV A T - AG L YLIGQ M A 1240
Cdd:PHA00368 1064 D P R A MDLWRL A DKVADETMLRP H KVSLQDSK A FGA L VKMVL QF K SF V I K S LNSKFI R S fye AT KNNR A I d MA L THVIS M G 1143
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 662242615 1241 I A APIHL A KV H ML A Q G KSGSEK K K YL EDNTN P AAF A RSLVNY SS LT G vmdvpld A MMGV A GAMGA P V G 1308
Cdd:PHA00368 1144 L A GGYYV A QA H VK A Y G LPEEQR K E YL KNALD P TMI A YAALSR SS HL G ------- A PLSI A NMVAG P L G 1204
PHA03414
PHA03414 virion protein; Provisional
730-1249
1.24e-05
virion protein; Provisional
Pssm-ID: 177642 [Multi-domain]
Cd Length: 1337
Bit Score: 50.13
E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 730 N VDAHV KA G AD AWERAMER M RAWQQKVQTV G H E ALGTSS r GY MPQKLDPQ K LLEWER A GKMG A LENHFAQQ F VDQL G MDE 809
Cdd:PHA03414 716 N LPPTI KA L AD RSDEIHGL M GQRAREAGVR G F E DFAPRP - GY FHRSWNWS K MAQMDE A APGL A RRAISEAV F RGIP G LER 794
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 810 A N A IKV A RDYLGY A KR RA L G - GLDVPANLHD AD M A --- D ALEEA LAKAGVYGQETIDRFRERFQR G GAGHT K A R k L DM D L 885
Cdd:PHA03414 795 A D A DTI A QAIVQR A RD RA T G i RSEFMGAMGV AD T A fir Q ALEEA NVSQAKFDSIMAKIEQKQSDQ G TVKYG K G R - L SL D M 873
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 886 T GHVLDPK T NQY V pl MEFYST D MSK L YQS Y M G RVT G EV ALA QH G VY G SPA I KS - M RE AMMHGPQAA T pael ESFD E FIND 964
Cdd:PHA03414 874 T AEINHNG T VYR V -- QDLIDR D LDR L MEN Y A G SMS G RS ALA RA G MP G DSE I EA f I RE YQREAAHLG T ---- DKVQ E LTGQ 947
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 965 ML G RR G G - D GN ---- PG L RTAMSN A RQ L A S MRY LG GMAIT Q A AEL TQLV H HL G LNSF MK SIPLF R -- NLFEEV R A gg GAK 1037
Cdd:PHA03414 948 LR G VF G D f T GN vpre HQ L GPVAQR A SG L T S ATM LG FSGVY Q L AEL ATMA H RQ G VFNV MK AMLNS R mg DFVGAM R R -- NPD 1025
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1038 L V D QIE - V Y G GY L DAEA R FH f P FEEAGQVR L YGH D S pg IATKLIRSAGRQFMHIS G HRA IH KF Q MK M AVEQIGV K AL RAA 1116
Cdd:PHA03414 1026 L A D EMQ t V L G LN L ANDI R MK - P WKRQFDTF L ASQ D T -- FMDRFLHAGKQAVPVLN G MKF IH NW Q SR M NANLTLN K VA RAA 1102
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1117 REGATPHHL L ---- A D MGF TP e K LA LI R edlp NIA T FDAK g N LRDLDFSKTQNPAAVAEFIQ A TQRGARQIIQ G HF r G ET 1192
Cdd:PHA03414 1103 QGDEAALRV L qqyg K D VDW TP - V LA RV R ---- GYV T YRGR - N AQSMNWGAWSQADVNTVMNT A LRIMDDSLLY G RV - G QN 1175
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 662242615 1193 GKY A TDTL GQ F L T QFRSF SITSAE K QW R RVAT N A GV ATAGLY L IG Q MAIA A PIHL AK 1249
Cdd:PHA03414 1176 SGF A RSPV GQ I L G QFRSF VAFAHN K LL R GTYE N S GV LGVASL L AF Q YPLT A LMMG AK 1232
PHA01972
PHA01972 structural protein
963-1363
2.38e-03
structural protein
Pssm-ID: 222842
Cd Length: 828
Bit Score: 42.21
E-value: 2.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 963 N DML G RRGGDG NP GLRTAMSNA R Q L ASMRY LG GMAITQAAELTQLVHHLGL N -- SFMK sip L F RN LFE E V r AG G GAKLVD 1040
Cdd:PHA01972 381 N MLM G YNMVEE NP VWGRRVAGL R N L WTASK LG AAVLSALSDSGTMSMAASY N am PPAR --- L L RN MLS E M - MP G SKSEAS 456
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1041 QIEVY G gy L D AE ARFHFPFEEAGQ v R L Y GH D S PGI A TKLIRSA G RQFMHIS g H RA IHK F Q M KM A VEQIGVKALRAAR E ga 1120
Cdd:PHA01972 457 RAQDF G -- L G AE SLLDRVNRWGTD - N L G GH R S RNL A EAVMKVS G LTAWTDA - A RA AFQ F E M MT A LGEAADSDWSDLP E -- 530
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1121 TPHHL L ADM G F T PEKL A L I redlpniatfd A KGNLRDLDFS K TQN P A A VAEFIQATQRG A RQIIQ G HFR GET -------- 1192
Cdd:PHA01972 531 SDRRI L GRK G I T ESDW A I I ----------- A AAPRTNYGGA K MLT P D A IYAVPRNMDAE A QTKLL G MVD GET mmavptpd 599
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1193 -- GKYATDTLGQFL T ---------- Q F R SF S I TSAEKQ WRR VA T NA G VAT A G lyli GQ MA I AA p I HL A KVHM L A ---- Q G 1256
Cdd:PHA01972 600 ar TRAIMAGGTKSG T fggelhrsff L F K SF P I ATIMRH WRR AF T GK G YPG A F ---- DR MA Y AA - I MV A STTL L G agsi Q A 674
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 1257 K SGSEK K K y LEDN T N P AAFARS L VNYS S LTGVM D VPLD A MM G ---- VAGAM G A PV GENAKIG T RGIEG w NP TLGYV G QGI 1332
Cdd:PHA01972 675 K DLLNG K D - PRSM T D P KFWIEA L LKGG S FGYYG D FLRN A HT G ygsd MTSYI G G PV LSYGDQL T KWVAM - NP QDAAQ G KAE 752
410 420 430
....*....|....*....|....*....|.
gi 662242615 1333 R AG GR LL ynpsgdtla KF GKAAL P G ANL P Y L 1363
Cdd:PHA01972 753 S AG AD LL --------- KF ATQQT P F ANL W Y T 774
SLT
pfam01464 Transglycosylase SLT domain; This family is distantly related to pfam00062. Members are found ...
14-119
2.66e-03
Transglycosylase SLT domain; This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
Pssm-ID: 396169 [Multi-domain]
Cd Length: 114
Bit Score: 39.21
E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 662242615 14 AFE A VS K W s G ISVGD L KGVYRV ES ss G TD PKA fqeg V HG pe S T A Y G HF QI TN ST L K GVQEQTGLKI D - RN D FNQSLW A AG 92
Cdd:pfam01464 1 IIK A AQ K Y - G VDPSL L LAIAQQ ES -- G FN PKA ---- V SK -- S G A V G LM QI MP ST A K RLGLRVNPGV D d LF D PEKNIK A GT 71
90 100
....*....|....*....|....*..
gi 662242615 93 YV LK QNMAAFNN D SAM AL G A FKE G TS R 119
Cdd:pfam01464 72 KY LK ELYKQYGG D LWL AL A A YNA G PG R 98
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
