|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
2-327 |
3.69e-169 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 474.72 E-value: 3.69e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 2 KPPILITIMFTVVAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHS 81
Cdd:MTH00105 2 NPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 82 GQWTMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTINPNLLMPMAIAS 161
Cdd:MTH00105 82 GQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAILS 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 162 VLVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIMTLTTFMLFMHSSSTTTSSLSQTWNKTPLTT 241
Cdd:MTH00105 162 ILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 242 ALILALMMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLTYATALTMFPSTNNMKMKWQFSTTK 321
Cdd:MTH00105 242 SLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENTK 321
|
....*.
gi 64500790 322 KMILLP 327
Cdd:MTH00105 322 PMTLLP 327
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
3-326 |
8.37e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 356.81 E-value: 8.37e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 3 PPILITIMFTVVAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHSG 82
Cdd:MTH00135 3 PYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 83 QWTMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTiNPNLLMPMAIASV 162
Cdd:MTH00135 83 QWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLTST 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 163 LVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIMTLTTFMLFMHSSSTTTSSLSQTWNKTPLTTA 242
Cdd:MTH00135 162 LVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 243 LILALMMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLTYATALTMFPSTNNMKMKWQFSTTKK 322
Cdd:MTH00135 242 LTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPSTQL 321
|
....
gi 64500790 323 MILL 326
Cdd:MTH00135 322 TLPL 325
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
3-322 |
1.58e-112 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 330.63 E-value: 1.58e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 3 PPILITIMFTVVAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHSG 82
Cdd:MTH00112 3 PHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 83 QWTMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTINPNLLMPMAIASV 162
Cdd:MTH00112 83 QWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILST 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 163 LVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIMTLTTFMLFMHSSSTTTSSLSQTWNKTPLTTA 242
Cdd:MTH00112 163 LIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNT 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 243 LILALMMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLTYATALTMFPSTNNMKMKWQFSTTKK 322
Cdd:MTH00112 243 TLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPKKN 322
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
3-325 |
5.16e-112 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 329.57 E-value: 5.16e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 3 PPILITIMFTVVAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHSG 82
Cdd:MTH00070 3 PYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 83 QWTMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTINPNLLMPMAIASV 162
Cdd:MTH00070 83 EWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLST 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 163 LVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIMTLTTFMLFMHSSSTTTSSLSQTWNKTPLTTA 242
Cdd:MTH00070 163 LIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTS 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 243 LILALMMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLTYATALTMFPSTNNMKMKWQFSTTKK 322
Cdd:MTH00070 243 MMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNKTN 322
|
...
gi 64500790 323 MIL 325
Cdd:MTH00070 323 NLL 325
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
5-306 |
3.17e-90 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 274.12 E-value: 3.17e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 5 ILITIMFTVVAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHSGQW 84
Cdd:MTH00041 5 VLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 85 TMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTINPNLLMPMAIASVLV 164
Cdd:MTH00041 85 SINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 165 GGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIMTLTTFMLFMHSSSTTTSSLSQTWNKTPLTTALI 244
Cdd:MTH00041 165 GGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLF 244
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 64500790 245 LALMMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLTYATALTMFP 306
Cdd:MTH00041 245 ILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFP 306
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
3-325 |
7.75e-87 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 265.29 E-value: 7.75e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 3 PPILITIMFTVVAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHSG 82
Cdd:MTH00200 3 PLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 83 QWTMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTINPNLLMPMAIASV 162
Cdd:MTH00200 83 QWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLSV 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 163 LVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIMTLTTFMLFMHSSSTTTSSLSQTWNKTPLTTA 242
Cdd:MTH00200 163 LVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSM 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 243 LILALMMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLTYATALTMFPSTNNMKMKWQFSTTKK 322
Cdd:MTH00200 243 LLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSNSN 322
|
...
gi 64500790 323 MIL 325
Cdd:MTH00200 323 LLV 325
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
10-318 |
9.05e-56 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 184.70 E-value: 9.05e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 10 MFTVVAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHSGQWTMSkn 89
Cdd:MTH00144 10 LFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM-- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 90 tnpmasTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTINP-NLLMPMAIASVLVGGWG 168
Cdd:MTH00144 88 ------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 169 GLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYI-IMTLTTFMLFMHSSSTTTSSLSQtwNKTPLTTALILAL 247
Cdd:MTH00144 162 GLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIvSSGFLFFSLWSGDSGSMKDLGSL--KPSYKTGLSIISL 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 64500790 248 MMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLTYATALTMFPSTNNMKMKWQFS 318
Cdd:MTH00144 240 LLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNS 310
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-326 |
3.51e-54 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 180.79 E-value: 3.51e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 1 IKPPILITIMFTVVAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 81 sgqwtMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQIsptINPNLLMPMAIA 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 161 SVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIMTLTTFMLFMHSSSTTTSSLSQTWNKTPLT 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 241 TALILALMMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLTYaTALTMFPSTNNMKMKWQFSTT 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISY-SSLMLNYNKNKWNLKKKKNKF 311
|
....*.
gi 64500790 321 KKMILL 326
Cdd:MTH00160 312 SLILNF 317
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-299 |
2.93e-51 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 173.04 E-value: 2.93e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 1 IKPPILITIMFTVVAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIInllh 80
Cdd:MTH00011 3 STFPTMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 81 sgQWTMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTINPNLLMPMAIA 160
Cdd:MTH00011 79 --MWSFPSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 161 SVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIMTLTTFMLFMHSSSTTTSSLSQTWNKTPLT 240
Cdd:MTH00011 157 SALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTT 236
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 64500790 241 TALILALMMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLTYA 299
Cdd:MTH00011 237 SMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN 295
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-325 |
1.02e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 155.99 E-value: 1.02e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 11 FTVVAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHSGQWTMSknt 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNLYLSLLS--- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 91 npmaSTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPtiNPNLLMPMAIASVLVGGWGGL 170
Cdd:MTH00197 82 ----VVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 171 NQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIMTLTTFMLFMHSSSTTTSSLSQTWNKTPLTTALILALMMS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 64500790 251 LGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLTYATALTMFPSTNNMKMKWQFSTTKKMIL 325
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLFILL 310
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-270 |
7.08e-34 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 129.85 E-value: 7.08e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 8 TIMFTVVAGTTIVLTSSHWLTIWIGFEMNLLAI-IPILMKKHNPRATEAATKYFLMQATASMLLMMGI------------ 74
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLyVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGIsllygatgslnl 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 75 --IINLLHSGQwtmskNTNPM---ASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTI 149
Cdd:COG1007 186 agIAAALAAGG-----ANSPLlllGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEA 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 150 NPNL-------LMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWM----AAITPYNPTMMILNLVIYIIMTLTTFML 218
Cdd:COG1007 261 FPGLaadwqllLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLllglAAGTPLGVSAALFYLLAYLFMNLGAFAV 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 64500790 219 FMHSSSTTTSSLSQ-----TWNKTPLTTALILALMMSLGGLPPLSGFTPKWMIIQEL 270
Cdd:COG1007 341 ILLLSRKGGEAEEIedlagLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAA 397
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
4.59e-31 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 118.96 E-value: 4.59e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 23 SSHWLTIWIGFEMNLLAIIP-ILMKKHNPRATEAATKYFLMQATASMLLMMGIII-----------NLLHSGQWTMSKNT 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLlIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLmynytgtlsfdELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 91 NPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILL-TWQKIAPL-----SVLYQISPTINPNLLMPMAIASVLV 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYglirrSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 165 GGWGGLNQTQLRKILAYSSIAHMGWM----AAITPYNPTMMILNLVIYIIMTLTTFMLFMHSSSTTT-----SSLSQTWN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMlialGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVhtrniRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 64500790 236 KTPLTTALILALMMSLGGLPPLSGFTPKWMIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
4-267 |
6.95e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 118.58 E-value: 6.95e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 4 PILITImftVVAGTTIVLTSSHWLTIWIGFEM-NLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHSG 82
Cdd:MTH00199 100 PILILI---VALGSLLLVSSINWLSIYLAIELqTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 83 QWTMSKN----TNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTInpNLLMPMA 158
Cdd:MTH00199 177 ETSIQGInsilTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVT--NVVLICA 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 159 IASVLVGGWGGLNQTQLRKILAYSSIAHMG---WMAAITPYNPTMMIL-NLVIYIIMTLTTF--MLFMHSSSTTTSSLSQ 232
Cdd:MTH00199 255 VLSIIYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESIQASLiYMIIYVIMSICSFsiILSLKLTKGLIVEVSG 334
|
250 260 270
....*....|....*....|....*....|....*.
gi 64500790 233 TWNKTPLtTALILAL-MMSLGGLPPLSGFTPKWMII 267
Cdd:MTH00199 335 LSRKNPV-IALTLALtFLSIAGIPPLAGFLSKWLIL 369
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-326 |
3.34e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 115.51 E-value: 3.34e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 13 VVAGTTIVLTSSHWLTIWIGFEMNLLAI-IPILMKKHNPRATEAATKYFLMQATASMLLMMGI-------------IINL 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCallcgttgglhlsYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 79 LHSGQWTMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPtiNPNLLMPMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGL--NVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 159 IASVLVGGWGGLNQTQLRKILAYSSIAHMG---WMAAITPYNPTMM-ILNLVIYIIMTLTTFM--LFMHSSSTTTSSLSQ 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGfvlWGIEIGSFESIQAsLVYLFIYIIMSICVFSiiLALNVYKNLIIEFSG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 233 TWNKTPLTTALILALMMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLT---YATALTMFPSTN 309
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVkilFFQANSFLLIST 319
|
330
....*....|....*..
gi 64500790 310 NMKMKWQFSTTKKMILL 326
Cdd:MTH00196 320 KILKKENKINLRKALLI 336
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
9-268 |
3.02e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 114.15 E-value: 3.02e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 9 IMFTVVaGTTIVLTSSHWLTIWIGFEMNLLAI-IPILMKKHNPRATEAATKYFLMQATASMLLMMGI------------- 74
Cdd:PRK05777 109 VLFALL-GMMVMVSANDLLTLFLGLELLSLPLyALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMsllygatgslsfa 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 75 -IINLLHSGQwtmskNTNPMAST---MMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAP----LSVLYQIS 146
Cdd:PRK05777 188 gIAKALADGS-----GNSLLLLFglvFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAfavlLRLLVVAF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 147 PTINP---NLLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWM----AAITPYNPTMMILNLVIYIIMTLTTF-ML 218
Cdd:PRK05777 263 GGLSEdwqQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvglAAGTAEGYSAVLFYLLAYLFMTLGAFgVI 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 64500790 219 FMHSSSTTTSSLSQTWN----KTPLTTALILALMMSLGGLPPLSGFTPKWMIIQ 268
Cdd:PRK05777 343 SLLRRKGGEAESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFE 396
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-296 |
7.50e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 107.34 E-value: 7.50e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 6 LITIMFTVVAGTTIVLTSSHWLTIWIGFEMNLLAI-IPILMKKHNPRATEAATKYFLMQATASMLLMMGI---------- 74
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGIsliygftgsl 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 75 -IINLLHSGQWTMSKNTN-PMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTI--- 149
Cdd:TIGR01770 184 nFEDLLLFLSNGMLNISLlLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfg 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 150 ----NPNLLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGW----MAAITPYNPTMMILNLVIYIIMTLTTFMLFM- 220
Cdd:TIGR01770 264 fseaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYiligLLAGTLEGIKAVLFYIFIYALMSLGAFGVLSl 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 221 -----HSSSTTTSSLSQTWNKTPLTTALILALMMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMR 295
Cdd:TIGR01770 344 lrsykDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLR 423
|
.
gi 64500790 296 L 296
Cdd:TIGR01770 424 V 424
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-268 |
4.83e-23 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 99.07 E-value: 4.83e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 14 VAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHSGQWTMS------ 87
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMAdlaarl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 88 KNTNPM----ASTMMTIALAMKLGLAPFHFWVPEV--TQGIPMS---SGL--------ILLTWQKIAPLSVLYQISPtin 150
Cdd:COG0651 197 AELDPGlllaAFALLLVGFGIKAALFPLHFWLPDAypAAPSPVSallSGLltkvgvyaILRVLTLLFGADPALFLGT--- 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 151 pnLLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIM-TLTTFMLFM-------HS 222
Cdd:COG0651 274 --LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNhALAKALLFLaagaierAT 351
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 64500790 223 SSTTTSSLSQTWNKTPLTTALILALMMSLGGLPPLSGFTPKWMIIQ 268
Cdd:COG0651 352 GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ 397
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
16-267 |
6.04e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 78.75 E-value: 6.04e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 16 GTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRAT---------EAATKYFLMQATASMLLMMGIIINLLHSGQWTM 86
Cdd:MTH00198 200 GGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNEGM 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 87 S--------KNTN------PMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLyqISPTINPN 152
Cdd:MTH00198 280 LgtilsatlETTNielrqgSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--TSLVITSK 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 153 LLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWM----AAITPYNPTMMILNLVIYIIMTLTTFMLFM-------- 220
Cdd:MTH00198 358 LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFIligvSAGTYESLQASWTYAVTYLVSALASFTVICtleefgtr 437
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 221 -------------HSSSTTTSSLSQTWNKTPLTTALILALMMSLGGLPPLSGFTPKWMII 267
Cdd:MTH00198 438 tptsrqrdgsfgnYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
47-260 |
1.63e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 77.35 E-value: 1.63e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 47 KHNPRATEAATKYFLMQATASMLLMMGI---------------IINLLHSGQWTMSKNTNpMASTMMTIALAMKLGLAPF 111
Cdd:CHL00049 155 KKDVRSNEATMKYLLMGGASSSILVYGFswlyglsggeielqeIVNGLINTQMYNSPGIS-IALIFITVGIGFKLSLAPF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 112 HFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTINP-------NLLMPMAIASVLVGGWGGLNQTQLRKILAYSSI 184
Cdd:CHL00049 234 HQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYfssnewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 185 AHMGWM-----AAITPYNPTMMILNLVIYIIMTLTTF---MLF-MHSSSTTTSSLSQTWNKTPLTTALILALMMSLGGLP 255
Cdd:CHL00049 314 GQIGYViigiiVGDSNDGYASMITYMLFYIFMNLGTFaciVLFgLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIP 393
|
....*
gi 64500790 256 PLSGF 260
Cdd:CHL00049 394 PLAGF 398
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
7-260 |
2.66e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 76.63 E-value: 2.66e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 7 ITIMFTVVAGTTIVLTSSHWLTIWIGFEMnlLAIIPILMK---KHNPRATEAATKYFLMQATASMLLMMGI-IINLLHSG 82
Cdd:PRK02504 113 AAILLTATLGGMFLSGATELVMIFISLET--LSIASYLLTgymKRDPRSNEAALKYLLIGAASSAIFLYGSsLLYGLSGG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 83 QWTMSKNTNPMA---STMMTIAL-------AMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTINPN 152
Cdd:PRK02504 191 STQLSAIALALItspSLGLALALvfviagiAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVTAFPS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 153 -------LLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGW----MAAITPYNPTMMILNLVIYIIMTLTTFM---L 218
Cdd:PRK02504 271 fdeqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFvmigLVAGTEAGYASMVFYLLAYLFMNLGAFAcviL 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 64500790 219 F-MHSSSTTTSSLSQTWNKTPLTTaLILAL-MMSLGGLPPLSGF 260
Cdd:PRK02504 351 FsLRTGTDQISDYAGLYQKDPLLT-LGLSLcLLSLGGIPPLAGF 393
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-270 |
2.87e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 67.21 E-value: 2.87e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 49 NPRATEAATKYFLMQATASMLLMMGIIINLLHSGQWTM--------SKNTNPMASTMMTIALAMKLGLAPFHFWVPEV-T 119
Cdd:PRK08375 151 DRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMadlagalaENPTVVTAFGFVLLALALKAAVFPLHTWLPRAyP 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 120 QGIPMSSGLILLTWQKIAP------LSVLYQISPTINPNL---LMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK08375 231 AAPPVVTALLSGLVTKVAVyaliriYFTVFGGDFRFALGLgwlLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYI 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 191 ----AAITPYNPTMMILNLVIYIIMTLTTFM----LFMHSSSTTTSSLSQTWNKTPLTTALILALMMSLGGLPPLSGFTP 262
Cdd:PRK08375 311 llglALLTPLALAAGLLHLLHHALMKGALFLaagaIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVS 390
|
....*...
gi 64500790 263 KWMIIQEL 270
Cdd:PRK08375 391 KWYLVVGA 398
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
5-268 |
1.48e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 65.35 E-value: 1.48e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 5 ILITIMFTVVAGttiVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIInLLHSGQW 84
Cdd:TIGR01972 110 ALLLLLEAGVIG---VFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILG-LYFLGGG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 85 TMS---KNTNPMASTMMT-------IALAMKLGLAPFHFWVPEV-----TQGIPMSSGLILltwqKIAPLSVLyQISPTI 149
Cdd:TIGR01972 186 TFDlleLLNLPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDAhveapTAGSVILAGVLL----KMGTYGFL-RFNLPL 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 150 NPN-------LLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMA-AITPYNPTMMILNLVIYIIMTLTTFMLFM- 220
Cdd:TIGR01972 261 FPDaslyfapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLlGIFSFNELGISGAVFQMISHGLITAALFLl 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 64500790 221 ------HSSSTTTSSLSQTWNKTPLTTALILALMMSLGGLPPLSGFTPKWMIIQ 268
Cdd:TIGR01972 341 vgvlyeRAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILL 394
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
55-267 |
7.11e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 60.09 E-value: 7.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 55 AATKYFLMQATASMLLMMGIIINLLHSGQWTMSKNT---NPMASTM-------MTIALAMKLGLAPFHFWVPEV-----T 119
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAElaaAPLPLTAqlllflaFFIAFAVKVPMFPFHTWLPDAhveapT 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 120 QGIPMSSGLIL----------------LTWQKIAPLsvlyqisptinpnlLMPMAIASVLVGGWGGLNQTQLRKILAYSS 183
Cdd:COG1008 242 AGSVLLAGVLLkmggygllrfalplfpEASAYFAPL--------------LAALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 184 IAHMGWM-AAITPYNPTMM---ILNLVIYIIMTLTTFMLF------MHssSTTTSSLSQTWNKTPLTTALILALMMSLGG 253
Cdd:COG1008 308 VSHMGFVlLGIFALNPLGLqgaVLQMVSHGLITAALFLLVgvlydrTH--TRDIADLGGLAKRMPVLAALFLLAALASLG 385
|
250
....*....|....
gi 64500790 254 LPPLSGFTPKWMII 267
Cdd:COG1008 386 LPGTSGFVGEFLVL 399
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-266 |
1.19e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 59.34 E-value: 1.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 50 PRATEAATKYFLMQATASMLLMMGIIINLLHSGQWTMS----------KNTNPMASTMMTIALAMKLGLAPFHFWVPEVT 119
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAylavkmsenpTVVAKIALALFIAGLAMKSGAVPVHMWLPDAY 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 120 QGIPMSSGLILLTwQKIAPLSVLYQIS-----PTINPN----LLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK08376 248 PAAPSSISAMLLV-IKQAGLYALARVLfsiygPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 191 -----AAITPYNPT------MMILNLVIYIIM--TLTTFMLFMHSSSTTTSSLSQTWNK-------TPLTTALILALMMS 250
Cdd:PRK08376 327 llglgVGLAALGDPamasygEIALAGGIYHIVnhALYKALLFLTAGAVIYETGTRNLNElgglartMPKTTIAFLIGAAA 406
|
250
....*....|....*.
gi 64500790 251 LGGLPPLSGFTPKWMI 266
Cdd:PRK08376 407 IVGLPPFNGFASKWLI 422
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-270 |
9.55e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 56.70 E-value: 9.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 48 HNPRATEAATKYFLMQATASMLLMMGIIINLLHSGQWTMS----KNTNPMASTMMTIALAM-------KLGLAPFHFWVP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSellaAAPTILSSPLLTLILLLlllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 117 E-----------------VTQGIPMssglilltwqkIAPLSVLYQISPTINPnLLMPMAIASVLVGGWGGLNQTQLRKIL 179
Cdd:COG1009 236 DamegptpvsallhaatmVKAGVYL-----------LARLSPLFALSPVWLT-VVAIIGAITALFAALIALAQTDIKRVL 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 180 AYSSIAHMGWM----------AAItpynptMMILN---------LVIYIIM--TLTTFMLFMHSSstttsslsqtWNKTP 238
Cdd:COG1009 304 AYSTVSQLGYMflalgvgayvAAL------FHLLThaffkallfLGAGSVIhaTGTRDIRKMGGL----------RKKMP 367
|
250 260 270
....*....|....*....|....*....|..
gi 64500790 239 LTTALILALMMSLGGLPPLSGFTPKWMIIQEL 270
Cdd:COG1009 368 ITAITFLIGALSLAGIPPFAGFFSKEAILEAA 399
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-327 |
4.52e-08 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 48.79 E-value: 4.52e-08
10 20 30
....*....|....*....|....*....|....*..
gi 64500790 291 YFYMRLTYATALTMFPSTNNMKMKWQFSTTKKMILLP 327
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLP 37
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
13-275 |
1.52e-07 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 53.08 E-value: 1.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 13 VVAGTTIVLTSSHWLTIWIGFEMNLLA-IIPILMKKHNPRatEAATKYFLMQA--TASMLLMMGIIIN-----LLHSGQW 84
Cdd:PRK08668 107 SLAGVLGVFLANDLLTLYIFWEIMTFSsFMMVPMGKKESR--KASLKYFVLSAigAYAMLYAIFLIYAktgtfDFADISQ 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 85 TMSKNTNPMASTMMTIALA----MKLGLAPFHFWVPEVTQGIPMS-----SG-------------LILLTWQKIAPLSVL 142
Cdd:PRK08668 185 GLINDTSTGFALIVFLFLLafgvAKAGIFPLHVWAPDAYSEAPQSfsavlSGqlsklgaygfllvLYVLPGTKLFSEFGT 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 143 YQISPTINpNLLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGW----MAAITPYN--------------PTMMILN 204
Cdd:PRK08668 265 YRGVPLFN-YILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYilvgLGLGTSLGfagglfhvfnhalfKGLFFLI 343
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 64500790 205 LVIYIIMTLTTFMLFMHSSSTttsslsqtwnKTPLTTALILALMMSLGGLPPLSGFTPKWMIIQELTKNEM 275
Cdd:PRK08668 344 FAAVIYRTGTTKISEMGGLIE----------KMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM 404
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
33-268 |
7.27e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 50.72 E-value: 7.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 33 FEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIII--------NLLH-SGQWTMSKNTNP--MASTMMTIA 101
Cdd:PRK12663 137 FEVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLlygtfgtlNMAHiAMRLNDMGDTATltTIALLFLLA 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 102 LAMKLGLAPFhFWVPEVTQGIPMSSGLI---LLTWQKIAPL----SVLYQISPTINPNLLMPMAIASVLVGGWGGLNQTQ 174
Cdd:PRK12663 217 FGMKAALFPF-MWLPAAYHTPNTEVAALfaaLLTKVGIYALirvfTLLFPQERELLHPLLATMAAITMVIGALGALAYKD 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 175 LRKILAYSSIAHMGWM-AAITPYNPT---------------MMILNLVIYIIMTLT-TFMLfmhssstttSSLSQTWNKT 237
Cdd:PRK12663 296 IRRIAGYQVISSIGFIlLGLALGTPAgingaifylvhdmvvKTALFLIAGSLVRLTgYRSL---------QYLGGLYRKE 366
|
250 260 270
....*....|....*....|....*....|.
gi 64500790 238 PLTTALILALMMSLGGLPPLSGFTPKWMIIQ 268
Cdd:PRK12663 367 PLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
78-263 |
1.04e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.43 E-value: 1.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 78 LLHSGQWTmsKNTNPMASTMMTIALA--MKLGLAPFHFWVPEVTQGI-PMSSGLILLTWQKiAPLSVLYQISPTINPN-- 152
Cdd:PRK12650 194 ILHSDVWA--EKPGLTTVVAVLIAVAafTKSAQFPFHFWLPEAMAAItPVSAFLHAAAVVK-AGIYLLLRFSPVFHDVav 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 153 ---LLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAI----TPYNPTMMILNLVIYIIMTLTTFMLF----MH 221
Cdd:PRK12650 271 wnwLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATigvgTPFALTAAVVHTLAHALFKSSLFMLIgvvdHQ 350
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 64500790 222 SSSTTTSSLSQTWNKTPLTTALILALMMSLGGLPPLSGFTPK 263
Cdd:PRK12650 351 AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-298 |
1.30e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 49.97 E-value: 1.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 47 KHNPRATEAATKYFLMQATASMLLMMGIII-------------NLLHSGQW---TMSKNTNPMASTMMTIALAM-----K 105
Cdd:PRK12667 157 RDRGDAVEAAIKYALIGAVGTTLYFLALAFlyatfgtlnmadlSAKIRGLSfplTGGLAGNPPLALGVALALALwaftiK 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 106 LGLAPFHFWVPEVTQGIP-----MSSGLILLT--WQKIAPLSVLYQISPTINP------NLLMPMAIASVLVGGWGGLNQ 172
Cdd:PRK12667 237 AAIFPNHFWLPDAHPAAPspvsaMLSGLVVNVgaYAIIRFLYTIFGISPSLIDfraalsPILIILGAVSAIIGALMMVVQ 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 173 TQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIM-TLTTFMLFM-------HSSSTTTSSLSQTWNKTPLTTALI 244
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINhAIAKSLLFLasgvfihAAGTRDIDELAGLGRKMPIASFAF 396
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 64500790 245 LALMMSLGGLPPLSGFTPKWMIIQELTKNEMITTPTLLATTALLNLYFYMRLTY 298
Cdd:PRK12667 397 LIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWY 450
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
61-263 |
3.65e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 48.77 E-value: 3.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 61 LMQATASMLLMM-GIIINLLHSGQWTMSK-NTNPMASTMMTIALAM-------KLGLAPFHFWVPEVTQG-IPMSSGL-- 128
Cdd:PRK12644 163 LLVTTAGGLAMLvGIIILGQAAGTYRLSElLADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAApTPVSAYLha 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 129 -------ILLtwqkIAPLSVLYQISPTINPnLLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPY-NPTM 200
Cdd:PRK12644 243 aamvkagIYL----VARLAPGFADVPVWRP-TVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIgTRDA 317
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 201 MILNLVIYIIMTLTTFMLFM------HSSSTT-TSSLSQTWNKTPLTTALILALMMSLGGLPPLSGFTPK 263
Cdd:PRK12644 318 ALAGLAMLLAHALFKAALFLvvgiidHSTGTRdIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
50-218 |
2.13e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 46.23 E-value: 2.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 50 PRATEAATKYFLMQATASMLLMMGIIINLLHSGQWTMS-----KNTNPMASTMM-----TIALAMKLGLAPFHFWVPE-- 117
Cdd:PRK06473 153 QRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDyeplrSHTLPLSTQLLllapiLVGFGIKIPLVPFHTWLPDah 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 118 VTQGIPMSS-------------------GLILLTWQKIAPLsvlyqisptinpnlLMPMAIASVLVGGWGGLNQTQLRKI 178
Cdd:PRK06473 233 VEASTPVSVllagvllklgtygllrfgvGLFPEAWVYLAPW--------------LATWAVVSVLYGASCAIAQKDMKKM 298
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 64500790 179 LAYSSIAHMGWM----AAITPYNPTMMILNLVIYIIMTLTTFML 218
Cdd:PRK06473 299 VAYSSIGHMGYIllaaAAATPLSILAAVFQMISHGLISALLFLL 342
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
7-268 |
5.28e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 44.64 E-value: 5.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 7 ITIMFTVVAGTTIVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHSGQWTM 86
Cdd:PRK06277 103 VFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNI 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 87 S--------KNTNPM---ASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLILLTWQKIAPLSVLYQISPTINPNLLM 155
Cdd:PRK06277 183 TdihnallvNPTSPViygGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGLSYF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 156 P--------MAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAI----TPYNPTMMILNLVIYIImtlTTFMLFMHSS 223
Cdd:PRK06277 263 PsaqgvliaLSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGlalgTPLGIVAGIFHAINHVI---YKSALFLGAG 339
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 64500790 224 STTTSSLSQTWNK-------TPLTTALILALMMSLGGLPPLSGFTPKWMIIQ 268
Cdd:PRK06277 340 IVSYRTKTSNLRKlggllpvMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-190 |
6.37e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 44.75 E-value: 6.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 13 VVAGTTIVLTSSHWLTIWIGFEMNLL---AIIPILMKKHNpraTEAATKYFLMQATASMLLMMGIIINLLHSGQ------ 83
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVfsaMLIAILSAREN---IDAALKYIFIASTAMIFAFIGLIFLFSLTRQalgtgt 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 84 --WT--------MSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIP------MSSGLILLTWQKIAPLSVLY---Q 144
Cdd:PRK08676 188 lnWTelaahaslLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPsvvsalLSGTVLNIGIYGILRLSALLrqsG 267
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 64500790 145 ISPTINpNLLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK08676 268 AAEQFS-NVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLM 312
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
79-211 |
6.89e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 44.53 E-value: 6.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 79 LHSGQWTMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGL----ILLTWQKIAPLSVLYQISPTINPNL- 153
Cdd:MTH00226 217 LASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVllagILLKLGGYGLVRLSWPILPLGAQNLa 296
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 154 --LMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGwMAAITPYNPTMMILNLVIYIIM 211
Cdd:MTH00226 297 paVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIML 355
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-271 |
1.01e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 43.79 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 19 IVLTSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHSGQWTMS--KNTNPMAST 96
Cdd:PRK07234 109 AAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSglATADPEAFA 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 97 MMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLIL---LTWQKIAPLSVLYQISPTINPnLLMPMAIASVLVGGWGGLNQT 173
Cdd:PRK07234 189 LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLsgvVVKAGVFPLVRCALDVPGLDL-IVRIFGVGTALLGVLFALLEK 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 174 QLRKILAYSSIAHMGWMAAitpyNPTMMILNLVIYIIMTLTTFMLfmhsSSTTTSSLSQTWNKTPLTTALILALMM---S 250
Cdd:PRK07234 268 DLKRMLAFSTISQLGFILA----APLVGGLYALAHGLVKSTLFLC----AGALPSRNFTELISQMLGIGKWIPLTMasfS 339
|
250 260
....*....|....*....|.
gi 64500790 251 LGGLPPLSGFTPKWMIIQELT 271
Cdd:PRK07234 340 IAGFPLLAGFVSKVLTLKNLL 360
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
4-270 |
1.19e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 43.95 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 4 PILITIMFTVVAGTTIVLTSSHWLTiwigfeMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIIINLLHSGQ 83
Cdd:PRK08667 118 ALFILSMLGVVASANTFSFLFFWEI------MALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 84 WTMSKNTNPMASTMMT-----IALAMKLGLAPFHFWVPEVTQGIPMS-SGLILLTWQKIAPLSVLYQISPTINPNLLMPM 157
Cdd:PRK08667 192 FELSPLGASAGILSLVflllfLGFGIKAGIIPFHKWLPYAHPASPSNvSALMSGVMLKVAVYGLVRFLMDVLSPELWWGV 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 158 AI-----ASVLVGGWGGLNQTQLRKILAYSSIAHMGW-MAAITPY-------NPTMMILNLVIYIIMTLT----TFMLFM 220
Cdd:PRK08667 272 LIllagsISALLGVIYALKEHDLKGLLAYSSIENIGIiLMGIGLYvifgvygLDTLALLALGGALFHSLNhalfKSLLFL 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 64500790 221 HSSSTTTSSLSQTWNK-------TPLTTALILALMMSLGGLPPLSGFTPKWMIIQEL 270
Cdd:PRK08667 352 TAGSVVHATGTRNIEKmgglvklMPYTSALFLVGAVSIAALPPFNGFASELLLYESF 408
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
8-192 |
2.74e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 42.42 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 8 TIMFTVVAGTTIVL---TSSHWLTIWIGFEMNLL-AIIPILMKKHNPRATEAATKYFLMQATASMLLMMGIII------- 76
Cdd:MTH00014 91 TFMTNILILNLILLltfSASNLLMFYIFFEASLIpTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLifytnns 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 77 -NLLHSGQWTMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQGIPMSSGLIL------LTWQKIAPLSVLYQISPTI 149
Cdd:MTH00014 171 lSMLMSSMEPPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILagillkLGGYGLLRMSSLFMHINKS 250
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 64500790 150 NPNLLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAA 192
Cdd:MTH00014 251 LSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTA 293
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
55-188 |
5.84e-04 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 41.73 E-value: 5.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 55 AATKYFLMQATASMLLMMGIIINLLHSGQWTMSKN-----TNPMASTMMT-------IALAMKLGLAPFHFWVPEV---- 118
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAIIYLVVVYYNATGTFDiadllNLPLPPGVQYwlflaffIAFAVKMPMFPLHTWLPDAhvqa 241
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 64500790 119 -TQGIPMSSGLILltwqKIAP---LSVLYQISPTINPN---LLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMG 188
Cdd:PRK05846 242 pTAGSVLLAGILL----KMGAyglLRFSLPLFPDASHEfapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-267 |
5.88e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 41.64 E-value: 5.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 152 NLLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYII-MTLTTFMLFM-------HSS 223
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnHSIVKSALFMvsgsisyHFG 359
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 64500790 224 STTTSSLSQTWNKTPLTTALILALMMSLGGLPPLSGFTPKWMII 267
Cdd:PRK12662 360 TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-188 |
6.03e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 41.56 E-value: 6.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 55 AATKYFLMQATASMLLMMGIIINLLHSGQWTMSKNTNPMASTMMT----------IALAMKLGLAPFHFWVP----EVTQ 120
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLAlelllyagflIAFGVKLPIFPLHTWLPdahgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 64500790 121 GIPMSSGLILLTWQKIAPLSVLYQISP----TINPnLLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMG 188
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALIRFNVQMLPdahvYFAP-ALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-268 |
7.28e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 41.11 E-value: 7.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 97 MMTIALAMKLGLAPFHFWVPEvtqGIPMSSGLI------LLT----WQKIAPLSVLYQiSPTINpNLLMPMAIASVLVGG 166
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPD---SYPTAPAPVtavfagLLTkvgvYAIIRTHTLLFP-GGGLD-TLLMVVALLTMVVGI 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 167 WGGLNQTQLRKILAYSSIAHMGWM----AAITPYNPTMMILNLVIYIIMTLTTFMLF----MHSSSTTTSSLSQTWNKTP 238
Cdd:PRK12665 289 LGAIAQSDIKRLLSFTLVSHIGYMvfgiALSTVAGLSGAIYYVAHHITVQTTLFLVVglieRQAGSSSLRRLGGLAKASP 368
|
170 180 190
....*....|....*....|....*....|
gi 64500790 239 LTTALILALMMSLGGLPPLSGFTPKWMIIQ 268
Cdd:PRK12665 369 LLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
6-270 |
2.88e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.39 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 6 LITIMFTVVAGTTIVLTSSHWLTIWIGFE-MNLLAIIPILMKKHNPRAteaATKYFLMQATASMLLMMGIIINLLHSGQW 84
Cdd:PRK06459 74 LSSLYILTILGMAIVLTSDNYLLFLAGWEiMTIPSYVAIALTKKNKRP---AFVFMAFGELSTVLILAGFAWAFIISGTT 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 85 TMSKNTNPMASTMMTIALAMKLGLAPFHF--WVPEVTQGIPMSSGLIL---LTWQKIAPLSVLYQISPTINPN----LLM 155
Cdd:PRK06459 151 NFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILsatMTLMGVYGILKMTILTQTIPIGyfglTIL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 156 PMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIMTLTTFM-----------LFMHSSS 224
Cdd:PRK06459 231 AIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYMVTKQLITSIEHFSLITVILysfahsvaktgLFLSSGL 310
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 64500790 225 TTTSSLSQTWNKTPLTTALILALM-MSLGGLPPLSGFTPKWMIIQEL 270
Cdd:PRK06459 311 QEKQSITYSKKIRNRWIELGLTLLaSSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
85-268 |
3.64e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 38.92 E-value: 3.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 85 TMSKNTNPMASTMMTIALAMKLGLAPFHFWVP----EVTQGIPMSSGLILLTWQKIAPLSVLYQISP----TINPNLLMP 156
Cdd:PRK07363 198 NLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPdaytEASPAVAILLGGVLAKLGTYGLLRFGLQLFPqtwsLVAPGLAII 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 157 MAIaSVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAITPYNPTMMILNLVIYIIMTLTTFMLFMHSSST----------- 225
Cdd:PRK07363 278 GTI-SVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIverkvgtrdld 356
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 64500790 226 TTSSLSQTWNKTPLTTALILALMMSLGGLPPLSGFTPKWMIIQ 268
Cdd:PRK07363 357 VLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
52-326 |
4.82e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 38.59 E-value: 4.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 52 ATEAATKYFLMQATASMLLMMGI--------IINLLHSGQW--TMSKNTNPMASTMMTIALAMKLGLAPFHFWVPEVTQG 121
Cdd:PRK08377 156 AAEASMKYIVLGGIGSSFFLIGValiygatgTLNMAHIAQLagTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 122 IPMSSGLILLTWQKIAPLSVLYQISPTINP--------NLLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAAI 193
Cdd:PRK08377 236 APHPITVMFSAFVVKAGLYAMARILYLMQNangwssvlKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 194 TPYNPTM--------MILNLVIYIIMTLTTFMLFMHSSSTTTSSLSQTWNKTPLTTALILALMMSLGGLPPLSGFTPKWM 265
Cdd:PRK08377 316 LALGTQAgvdagvfhMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFR 395
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 64500790 266 IIQELTKNEMITTPTLLATTALLNLYFYMRLTYatalTMFPSTNNMKMKWQFSTTKKMILL 326
Cdd:PRK08377 396 IILAGLSAGYTWPVALVLGASVVEAVYYFRLIH----TMWFKGEGERIRENAAIGIILLLL 452
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-276 |
4.89e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 38.64 E-value: 4.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 11 FTVVAGTTIVLtSSHWLTIWIGFEMNLLAIIPILMKKHNPRATEAATKYFLMQATASMLLMM---GIIINLLHSGQWT-- 85
Cdd:PRK06589 124 LTILIGVLIAL-SSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLpavILIYTKTGNLDFVsg 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 86 --MSKNTNpMASTMMTIALAMKLGLAPFHFWVPE-----------------VTQGIPMSSGLILLTWqKIAPLSVLYQIS 146
Cdd:PRK06589 203 glFSKNQS-IILLLMFIYGIAKTAIFPVHSWLPAamvahypvsallhavivVKTGLFCIYKILLYIF-GLSYLQRIFAEF 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 147 ptinpNLLMPMAIASVLVGGWGGLNQTQLRKILAYSSIAHMGWMAA----ITPYNPTMMILNLVIYIIMTLTTFMLFMHS 222
Cdd:PRK06589 281 -----NWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLsafiLTPKALGAAILHLVSHSFAKICLFYSMGSI 355
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 64500790 223 SSTTTSSLSQTWNKTPLTTALILALM----MSLGGLPPLSGFTPKWMIIQELTKNEMI 276
Cdd:PRK06589 356 YSLKKEDQVDKLHGTSKSFPLISFIIsissLSLIGIPIFSGFISKFLILLAASEQNQP 413
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
100-188 |
8.77e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 37.74 E-value: 8.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 100 IALAMKLGLAPFHFWVPEVTQGIPMSS--------------GLILLTWqKIAPLSVLYqisptINPNLLMPMAIAsVLVG 165
Cdd:MTH00204 217 LSLAVKIPQIPFHIWLPQAHVEAPVAGsvilagillklggyGFLRFSW-PLFPAASEY-----FAPLIVMLSVIA-VIYG 289
|
90 100
....*....|....*....|...
gi 64500790 166 GWGGLNQTQLRKILAYSSIAHMG 188
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMG 312
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-188 |
9.54e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 37.72 E-value: 9.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 100 IALAMKLGLAPFHFWVPEVTQGIPMSSGLIL--------------LTWqkiaPLsvLYQISPTINPnLLMPMAIASVLVG 165
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILagvllklggygfirFSW----PL--LPEASEYFSP-LIQTLSLLAIIYG 286
|
90 100
....*....|....*....|...
gi 64500790 166 GWGGLNQTQLRKILAYSSIAHMG 188
Cdd:MTH00217 287 SLTTCRQVDLKRIIAYSSVAHMG 309
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
52-191 |
9.73e-03 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 37.60 E-value: 9.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 52 ATEAATKYFLMQATASMLLMMGIII------NLLHSGQ----WT-MSKNTNPMASTMMTIALAM-------KLGLAPFHF 113
Cdd:PRK06458 156 SLEAAWKYIIICSVGVAFALFGTILvyanaaTVMGDGEmailWTeLLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 64500790 114 WVPEVTQGIP-----MSSGLILltwqKIAPLSVL--YQI-SPTINP----NLLMPMAIASVLVGGWGGLNQTQLRKILAY 181
Cdd:PRK06458 236 WLPDAHSEAPspvsaLLSGVLL----NVALYAVLryYILiDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAY 311
|
170
....*....|
gi 64500790 182 SSIAHMGWMA 191
Cdd:PRK06458 312 SSIEHMGLIA 321
|
|
| |
