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Conserved domains on  [gi|643038239|gb|AIA95751|]
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Glyco_hydro_70, partial [uncultured Oenococcus sp.]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Glyco_hydro_70 super family cl27864
Glycosyl hydrolase family 70; Members of this family belong to glycosyl hydrolase family 70 ...
 1-132 9.93e-58

Glycosyl hydrolase family 70; Members of this family belong to glycosyl hydrolase family 70 Glucosyltransferases or sucrose 6-glycosyl transferases (GTF-S) catalyze the transfer of D-glucopyramnosyl units from sucrose onto acceptor molecules, EC:2.4.1.5. This family roughly corresponds to the N-terminal catalytic domain of the enzyme. Members of this family also contain the Putative cell wall binding domain pfam01473, which corresponds with the C-terminal glucan-binding domain.


The actual alignment was detected with superfamily member pfam02324:

Pssm-ID: 426720 [Multi-domain]  Cd Length: 831  Bit Score: 191.04  E-value: 9.93e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 643038239    1 EIKQAFKIYDEDELKADKQYTAYNIPASYALLLSNKDTVPRVYYGDLFTDDGQYMSAHSPYYDSITALLKARIKYVAGGQ 80
Cdd:pfam02324 338 EIKKAFEIYNEDLLAAEKKYTHSNIALAYALLLSNKDSIPRLYYGDMFSDDGQYMAHKSINYDAIDTLLKARIKYAAGGQ 417

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 643038239   81 SMGIQYVQGDSSMSSASdtYKGVLTSVRYGKDALTSSDTGDSETRTEGMAVV 132
Cdd:pfam02324 418 AMKITYQEGDKSHMDWD--YTEIITSVRYGKGALEATDQGDEATKTQGMAVI 467
 
Name Accession Description Interval E-value
Glyco_hydro_70 pfam02324
Glycosyl hydrolase family 70; Members of this family belong to glycosyl hydrolase family 70 ...
 1-132 9.93e-58

Glycosyl hydrolase family 70; Members of this family belong to glycosyl hydrolase family 70 Glucosyltransferases or sucrose 6-glycosyl transferases (GTF-S) catalyze the transfer of D-glucopyramnosyl units from sucrose onto acceptor molecules, EC:2.4.1.5. This family roughly corresponds to the N-terminal catalytic domain of the enzyme. Members of this family also contain the Putative cell wall binding domain pfam01473, which corresponds with the C-terminal glucan-binding domain.


Pssm-ID: 426720 [Multi-domain]  Cd Length: 831  Bit Score: 191.04  E-value: 9.93e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 643038239    1 EIKQAFKIYDEDELKADKQYTAYNIPASYALLLSNKDTVPRVYYGDLFTDDGQYMSAHSPYYDSITALLKARIKYVAGGQ 80
Cdd:pfam02324 338 EIKKAFEIYNEDLLAAEKKYTHSNIALAYALLLSNKDSIPRLYYGDMFSDDGQYMAHKSINYDAIDTLLKARIKYAAGGQ 417

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 643038239   81 SMGIQYVQGDSSMSSASdtYKGVLTSVRYGKDALTSSDTGDSETRTEGMAVV 132
Cdd:pfam02324 418 AMKITYQEGDKSHMDWD--YTEIITSVRYGKGALEATDQGDEATKTQGMAVI 467
PRK09441 PRK09441
cytoplasmic alpha-amylase; Reviewed
 24-81 4.27e-04

cytoplasmic alpha-amylase; Reviewed


Pssm-ID: 236518 [Multi-domain]  Cd Length: 479  Bit Score: 38.72  E-value: 4.27e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 643038239  24 NIPASYALLLSNKDTVPRVYYGDLFTDDGQYmsAHSPYYDSITALLKARIKYVAGGQS 81
Cdd:PRK09441 345 FKPLAYALILLREEGYPCVFYGDYYGASGYY--IDMPFKEKLDKLLLARKNFAYGEQT 400
 
Name Accession Description Interval E-value
Glyco_hydro_70 pfam02324
Glycosyl hydrolase family 70; Members of this family belong to glycosyl hydrolase family 70 ...
 1-132 9.93e-58

Glycosyl hydrolase family 70; Members of this family belong to glycosyl hydrolase family 70 Glucosyltransferases or sucrose 6-glycosyl transferases (GTF-S) catalyze the transfer of D-glucopyramnosyl units from sucrose onto acceptor molecules, EC:2.4.1.5. This family roughly corresponds to the N-terminal catalytic domain of the enzyme. Members of this family also contain the Putative cell wall binding domain pfam01473, which corresponds with the C-terminal glucan-binding domain.


Pssm-ID: 426720 [Multi-domain]  Cd Length: 831  Bit Score: 191.04  E-value: 9.93e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 643038239    1 EIKQAFKIYDEDELKADKQYTAYNIPASYALLLSNKDTVPRVYYGDLFTDDGQYMSAHSPYYDSITALLKARIKYVAGGQ 80
Cdd:pfam02324 338 EIKKAFEIYNEDLLAAEKKYTHSNIALAYALLLSNKDSIPRLYYGDMFSDDGQYMAHKSINYDAIDTLLKARIKYAAGGQ 417

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 643038239   81 SMGIQYVQGDSSMSSASdtYKGVLTSVRYGKDALTSSDTGDSETRTEGMAVV 132
Cdd:pfam02324 418 AMKITYQEGDKSHMDWD--YTEIITSVRYGKGALEATDQGDEATKTQGMAVI 467
PRK09441 PRK09441
cytoplasmic alpha-amylase; Reviewed
 24-81 4.27e-04

cytoplasmic alpha-amylase; Reviewed


Pssm-ID: 236518 [Multi-domain]  Cd Length: 479  Bit Score: 38.72  E-value: 4.27e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 643038239  24 NIPASYALLLSNKDTVPRVYYGDLFTDDGQYmsAHSPYYDSITALLKARIKYVAGGQS 81
Cdd:PRK09441 345 FKPLAYALILLREEGYPCVFYGDYYGASGYY--IDMPFKEKLDKLLLARKNFAYGEQT 400
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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