photosystem II protein V (chloroplast) [Cyanidiaceae sp. MX-AZ01]
cytochrome b559 subunit alpha( domain architecture ID 11414038)
cytochrome b559 subunit alpha is b-type cytochrome that is tightly associated with the reaction center of photosystem II (PSII)
List of domain hits
Name | Accession | Description | Interval | E-value | ||
psbE | CHL00064 | photosystem II protein V |
3-80 | 1.47e-56 | ||
photosystem II protein V : Pssm-ID: 177004 Cd Length: 83 Bit Score: 168.37 E-value: 1.47e-56
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Name | Accession | Description | Interval | E-value | ||
psbE | CHL00064 | photosystem II protein V |
3-80 | 1.47e-56 | ||
photosystem II protein V Pssm-ID: 177004 Cd Length: 83 Bit Score: 168.37 E-value: 1.47e-56
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PsbE | COG5720 | Photosystem II cytochrome b559 alpha subunit, PsbE [Energy production and conversion]; ... |
2-81 | 6.86e-56 | ||
Photosystem II cytochrome b559 alpha subunit, PsbE [Energy production and conversion]; Photosystem II cytochrome b559 alpha subunit, PsbE is part of the Pathway/BioSystem: Photosystem II Pssm-ID: 444430 Cd Length: 83 Bit Score: 166.43 E-value: 6.86e-56
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cyt_b559_alpha | TIGR01332 | cytochrome b559, alpha subunit; This model describes the alpha subunit of cytochrome b559, ... |
3-80 | 5.59e-53 | ||
cytochrome b559, alpha subunit; This model describes the alpha subunit of cytochrome b559, about 83 residues in length. The N-terminal half is homologous to the ~ 40-residue beta subunit. Cytochrome b559 is associated with photosystem II. Sequences scoring between trusted and noise cutoffs are fragments. [Energy metabolism, Photosynthesis] Pssm-ID: 130399 Cd Length: 80 Bit Score: 159.29 E-value: 5.59e-53
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Cytochrom_B559a | pfam00284 | Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit; This family is the lumenal ... |
43-81 | 3.33e-24 | ||
Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit; This family is the lumenal portion of cytochrome b559 alpha chain, matches to this family should be accompanied by a match to the pfam00283 family also. The Prosite pattern pattern matches the transmembrane region of the cytochrome b559 alpha and beta subunits. Pssm-ID: 425581 Cd Length: 39 Bit Score: 85.37 E-value: 3.33e-24
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Name | Accession | Description | Interval | E-value | ||
psbE | CHL00064 | photosystem II protein V |
3-80 | 1.47e-56 | ||
photosystem II protein V Pssm-ID: 177004 Cd Length: 83 Bit Score: 168.37 E-value: 1.47e-56
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PsbE | COG5720 | Photosystem II cytochrome b559 alpha subunit, PsbE [Energy production and conversion]; ... |
2-81 | 6.86e-56 | ||
Photosystem II cytochrome b559 alpha subunit, PsbE [Energy production and conversion]; Photosystem II cytochrome b559 alpha subunit, PsbE is part of the Pathway/BioSystem: Photosystem II Pssm-ID: 444430 Cd Length: 83 Bit Score: 166.43 E-value: 6.86e-56
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psbE | PRK02557 | cytochrome b559 subunit alpha; Provisional |
2-81 | 1.30e-54 | ||
cytochrome b559 subunit alpha; Provisional Pssm-ID: 179444 Cd Length: 81 Bit Score: 163.31 E-value: 1.30e-54
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cyt_b559_alpha | TIGR01332 | cytochrome b559, alpha subunit; This model describes the alpha subunit of cytochrome b559, ... |
3-80 | 5.59e-53 | ||
cytochrome b559, alpha subunit; This model describes the alpha subunit of cytochrome b559, about 83 residues in length. The N-terminal half is homologous to the ~ 40-residue beta subunit. Cytochrome b559 is associated with photosystem II. Sequences scoring between trusted and noise cutoffs are fragments. [Energy metabolism, Photosynthesis] Pssm-ID: 130399 Cd Length: 80 Bit Score: 159.29 E-value: 5.59e-53
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Cytochrom_B559a | pfam00284 | Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit; This family is the lumenal ... |
43-81 | 3.33e-24 | ||
Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit; This family is the lumenal portion of cytochrome b559 alpha chain, matches to this family should be accompanied by a match to the pfam00283 family also. The Prosite pattern pattern matches the transmembrane region of the cytochrome b559 alpha and beta subunits. Pssm-ID: 425581 Cd Length: 39 Bit Score: 85.37 E-value: 3.33e-24
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Cytochrom_B559 | pfam00283 | Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits; |
7-35 | 2.17e-10 | ||
Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits; Pssm-ID: 425580 Cd Length: 29 Bit Score: 50.10 E-value: 2.17e-10
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Blast search parameters | ||||
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