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Conserved domains on  [gi|6319978|ref|NP_010058|]
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Hbt1p [Saccharomyces cerevisiae S288C]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ser_rich_anae_1 super family cl41472
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
168-343 9.60e-12

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


The actual alignment was detected with superfamily member NF033849:

Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 69.65  E-value: 9.60e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    168 GDAGHPSIATTHNHSTSKAATSPVTHTHGHSSATTSPVTHTHGHASVKTTSPTNTHehskantgpSATATTHGHINVKTT 247
Cdd:NF033849  236 GQSAGTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTRGWSHTQST---------SESESTGQSSSVGTS 306
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    248 HPVSHGHS-GSSTgpkSTAAAQDHSSTKTNPSVTHGHTSVKDNSSATKGYSNTDSNSDrdvipGSFRGMTGTdvnpVDPS 326
Cdd:NF033849  307 ESQSHGTTeGTST---TDSSSHSQSSSYNVSSGTGVSSSHSDGTSQSTSISHSESSSE-----STGTSVGHS----TSSS 374
                         170
                  ....*....|....*..
gi 6319978    327 VYTSTGPKSNVSSGMNA 343
Cdd:NF033849  375 VSSSESSSRSSSSGVSG 391
 
Name Accession Description Interval E-value
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
168-343 9.60e-12

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 69.65  E-value: 9.60e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    168 GDAGHPSIATTHNHSTSKAATSPVTHTHGHSSATTSPVTHTHGHASVKTTSPTNTHehskantgpSATATTHGHINVKTT 247
Cdd:NF033849  236 GQSAGTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTRGWSHTQST---------SESESTGQSSSVGTS 306
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    248 HPVSHGHS-GSSTgpkSTAAAQDHSSTKTNPSVTHGHTSVKDNSSATKGYSNTDSNSDrdvipGSFRGMTGTdvnpVDPS 326
Cdd:NF033849  307 ESQSHGTTeGTST---TDSSSHSQSSSYNVSSGTGVSSSHSDGTSQSTSISHSESSSE-----STGTSVGHS----TSSS 374
                         170
                  ....*....|....*..
gi 6319978    327 VYTSTGPKSNVSSGMNA 343
Cdd:NF033849  375 VSSSESSSRSSSSGVSG 391
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
161-431 5.90e-08

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 56.94  E-value: 5.90e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    161 TAHRHSKGDAGHPSIATTHNHSTSkaatSPVTHTHGHSSATTSPVTHTHGHASVKTTSPTNTHEHSKANTgpsaTATTHG 240
Cdd:NF033849  245 ESVGHSTSQGQSHSVGTSESHSVG----TSQSQSHTTGHGSTRGWSHTQSTSESESTGQSSSVGTSESQS----HGTTEG 316
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    241 hinVKTTHPVSHGHSGSSTGPKSTAAAQDHS-STKTNPSVTHGHTSvKDNSSATKGYSNTDSNSDRDVIPGSF-RGMTGT 318
Cdd:NF033849  317 ---TSTTDSSSHSQSSSYNVSSGTGVSSSHSdGTSQSTSISHSESS-SESTGTSVGHSTSSSVSSSESSSRSSsSGVSGG 392
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    319 DVNPVDPSVYTSTGPKSN--VSSGMNAVDPSVYTDTSsksadrrkYSGNTATGPPQDTIKEIAQNVKMDESEQTGlKNDQ 396
Cdd:NF033849  393 FSGGIAGGGVTSEGLGASqgGSEGWGSGDSVQSVSQS--------YGSSSSTGTSSGHSDSSSHSTSSGQADSVS-QGTS 463
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 6319978    397 VSGSDAIQQQTmepepkaAVGTSGFVSQQPSYHDS 431
Cdd:NF033849  464 WSEGTGTSQGQ-------SVGTSESWSTSQSETDS 491
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
124-369 2.55e-06

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 51.93  E-value: 2.55e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    124 HGYSyvkTTTPAATSEQSKVKTSPPTSHEHSNIKASPTAHRHSKGDAGHPSIATTHNHSTSKAATSPVTHTHGHSS---- 199
Cdd:NF033849  235 LGQS---AGTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTRGWSHTQSTSESESTGQSSSVGTSEsqsh 311
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    200 ATTSPVTHTHGHASVKTTSPTNTHEHSKANT---GPSATATTHGHINVKTTHPVSHGHSGSSTGPKSTAAAQDHSS---- 272
Cdd:NF033849  312 GTTEGTSTTDSSSHSQSSSYNVSSGTGVSSShsdGTSQSTSISHSESSSESTGTSVGHSTSSSVSSSESSSRSSSSgvsg 391
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    273 -----------TKTNPSVTHGHTSvkdNSSATKGYSNTDSNSDRDVIPGSFRGMTGTDVNPVDPSVYTSTGPKSNVSSGM 341
Cdd:NF033849  392 gfsggiagggvTSEGLGASQGGSE---GWGSGDSVQSVSQSYGSSSSTGTSSGHSDSSSHSTSSGQADSVSQGTSWSEGT 468
                         250       260
                  ....*....|....*....|....*...
gi 6319978    342 NAVDPSVYTDTSSKSadrrkYSGNTATG 369
Cdd:NF033849  469 GTSQGQSVGTSESWS-----TSQSETDS 491
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
98-373 4.21e-05

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 47.60  E-value: 4.21e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978      98 ANVTSDVNPVSA------DTKSSSGPNATITThgySYVKTTTPAATSEQSKVKTSPPTSHEHSNIKASPT-AHRHSKGDA 170
Cdd:pfam05109  479 AGTTSGASPVTPspsprdNGTESKAPDMTSPT---SAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTsAVTTPTPNA 555
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978     171 GHPSIATThnhSTSKAATSPVTHTHGHSSATTSPVTHTHGHASVKTTSPTNTHEHSKANTGPS----------ATATTHG 240
Cdd:pfam05109  556 TSPTPAVT---TPTPNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTpvvtsppknaTSAVTTG 632
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978     241 HINVKTTHPVSHGHSGSSTGPKSTAAAQDHSSTKTnPSVTHGHTSVKDN------SSATKGYSNTDSNSDRdviPG---- 310
Cdd:pfam05109  633 QHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHM-PLLTSAHPTGGENitqvtpASTSTHHVSTSSPAPR---PGttsq 708
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6319978     311 -SFRGMTGTDVNPVDPSVYTSTGPKSNVS----SGMNAVDPSVYT-----DTSSKSADRRKYSGNTATGPPQD 373
Cdd:pfam05109  709 aSGPGNSSTSTKPGEVNVTKGTPPKNATSpqapSGQKTAVPTVTStggkaNSTTGGKHTTGHGARTSTEPTTD 781
PHA02694 PHA02694
hypothetical protein; Provisional
187-260 5.95e-03

hypothetical protein; Provisional


Pssm-ID: 177476  Cd Length: 292  Bit Score: 40.11  E-value: 5.95e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6319978    187 ATSPVTHTHGHSSATTSPVTHTHGHASvKTTSPTNTHEHSKANTGPSATATTHGHINVKTTHPVSHGHSGSSTG 260
Cdd:PHA02694    8 ASASANHAHGGNPQYPQYYSHNHGHEG-DRHDESENHIHITDDEHLVLSDDCLGNGASYCGHDHGHAGHGHEGG 80
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
158-374 9.03e-03

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 39.74  E-value: 9.03e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978   158 ASPTAHRHSKGDAGHPSIATTHNHSTSKAATSPVTHTHGHSSATTSPVTHThGHASVKTTSPTNTHEHSKANTGPSATAT 237
Cdd:COG3469   12 AGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTG-TTAASSTAATSSTTSTTATATAAAAAAT 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978   238 ThghinvktTHPVSHGHSGSSTGPKSTAAAQDHSSTKTNPSVTHGHTSVKdNSSATKGYSNTDSNSDRDVIPGSFRGMTG 317
Cdd:COG3469   91 S--------TSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGS-TTTSGASATSSAGSTTTTTTVSGTETATG 161
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 6319978   318 TDVNPVDPSVYTSTGPKSNVSSGMNAVDPSVYTDTSSKSAdrrkysgnTATGPPQDT 374
Cdd:COG3469  162 GTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTT--------ATTTGPPTP 210
 
Name Accession Description Interval E-value
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
168-343 9.60e-12

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 69.65  E-value: 9.60e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    168 GDAGHPSIATTHNHSTSKAATSPVTHTHGHSSATTSPVTHTHGHASVKTTSPTNTHehskantgpSATATTHGHINVKTT 247
Cdd:NF033849  236 GQSAGTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTRGWSHTQST---------SESESTGQSSSVGTS 306
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    248 HPVSHGHS-GSSTgpkSTAAAQDHSSTKTNPSVTHGHTSVKDNSSATKGYSNTDSNSDrdvipGSFRGMTGTdvnpVDPS 326
Cdd:NF033849  307 ESQSHGTTeGTST---TDSSSHSQSSSYNVSSGTGVSSSHSDGTSQSTSISHSESSSE-----STGTSVGHS----TSSS 374
                         170
                  ....*....|....*..
gi 6319978    327 VYTSTGPKSNVSSGMNA 343
Cdd:NF033849  375 VSSSESSSRSSSSGVSG 391
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
161-431 5.90e-08

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 56.94  E-value: 5.90e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    161 TAHRHSKGDAGHPSIATTHNHSTSkaatSPVTHTHGHSSATTSPVTHTHGHASVKTTSPTNTHEHSKANTgpsaTATTHG 240
Cdd:NF033849  245 ESVGHSTSQGQSHSVGTSESHSVG----TSQSQSHTTGHGSTRGWSHTQSTSESESTGQSSSVGTSESQS----HGTTEG 316
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    241 hinVKTTHPVSHGHSGSSTGPKSTAAAQDHS-STKTNPSVTHGHTSvKDNSSATKGYSNTDSNSDRDVIPGSF-RGMTGT 318
Cdd:NF033849  317 ---TSTTDSSSHSQSSSYNVSSGTGVSSSHSdGTSQSTSISHSESS-SESTGTSVGHSTSSSVSSSESSSRSSsSGVSGG 392
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    319 DVNPVDPSVYTSTGPKSN--VSSGMNAVDPSVYTDTSsksadrrkYSGNTATGPPQDTIKEIAQNVKMDESEQTGlKNDQ 396
Cdd:NF033849  393 FSGGIAGGGVTSEGLGASqgGSEGWGSGDSVQSVSQS--------YGSSSSTGTSSGHSDSSSHSTSSGQADSVS-QGTS 463
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 6319978    397 VSGSDAIQQQTmepepkaAVGTSGFVSQQPSYHDS 431
Cdd:NF033849  464 WSEGTGTSQGQ-------SVGTSESWSTSQSETDS 491
ser_rich_anae_1 NF033849
serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 ...
124-369 2.55e-06

serine-rich protein; This serine-rich protein belongs to a family with large size (over 1000 amino acids), which a highly serine-rich central region that averages over 300 aa in length. Species encoding members of this family of proteins tend to be anaerobic bacteria, including Gram-positive bacteria of the human gut microbiome and Chloroflexi from marine sediments.


Pssm-ID: 468206 [Multi-domain]  Cd Length: 1122  Bit Score: 51.93  E-value: 2.55e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    124 HGYSyvkTTTPAATSEQSKVKTSPPTSHEHSNIKASPTAHRHSKGDAGHPSIATTHNHSTSKAATSPVTHTHGHSS---- 199
Cdd:NF033849  235 LGQS---AGTGYGESVGHSTSQGQSHSVGTSESHSVGTSQSQSHTTGHGSTRGWSHTQSTSESESTGQSSSVGTSEsqsh 311
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    200 ATTSPVTHTHGHASVKTTSPTNTHEHSKANT---GPSATATTHGHINVKTTHPVSHGHSGSSTGPKSTAAAQDHSS---- 272
Cdd:NF033849  312 GTTEGTSTTDSSSHSQSSSYNVSSGTGVSSShsdGTSQSTSISHSESSSESTGTSVGHSTSSSVSSSESSSRSSSSgvsg 391
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    273 -----------TKTNPSVTHGHTSvkdNSSATKGYSNTDSNSDRDVIPGSFRGMTGTDVNPVDPSVYTSTGPKSNVSSGM 341
Cdd:NF033849  392 gfsggiagggvTSEGLGASQGGSE---GWGSGDSVQSVSQSYGSSSSTGTSSGHSDSSSHSTSSGQADSVSQGTSWSEGT 468
                         250       260
                  ....*....|....*....|....*...
gi 6319978    342 NAVDPSVYTDTSSKSadrrkYSGNTATG 369
Cdd:NF033849  469 GTSQGQSVGTSESWS-----TSQSETDS 491
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
98-373 4.21e-05

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 47.60  E-value: 4.21e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978      98 ANVTSDVNPVSA------DTKSSSGPNATITThgySYVKTTTPAATSEQSKVKTSPPTSHEHSNIKASPT-AHRHSKGDA 170
Cdd:pfam05109  479 AGTTSGASPVTPspsprdNGTESKAPDMTSPT---SAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTsAVTTPTPNA 555
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978     171 GHPSIATThnhSTSKAATSPVTHTHGHSSATTSPVTHTHGHASVKTTSPTNTHEHSKANTGPS----------ATATTHG 240
Cdd:pfam05109  556 TSPTPAVT---TPTPNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTpvvtsppknaTSAVTTG 632
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978     241 HINVKTTHPVSHGHSGSSTGPKSTAAAQDHSSTKTnPSVTHGHTSVKDN------SSATKGYSNTDSNSDRdviPG---- 310
Cdd:pfam05109  633 QHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHM-PLLTSAHPTGGENitqvtpASTSTHHVSTSSPAPR---PGttsq 708
                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6319978     311 -SFRGMTGTDVNPVDPSVYTSTGPKSNVS----SGMNAVDPSVYT-----DTSSKSADRRKYSGNTATGPPQD 373
Cdd:pfam05109  709 aSGPGNSSTSTKPGEVNVTKGTPPKNATSpqapSGQKTAVPTVTStggkaNSTTGGKHTTGHGARTSTEPTTD 781
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
108-338 1.76e-04

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 45.34  E-value: 1.76e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978     108 SADTKSSSGPNATITTHGYSYVKTTTP--AATSEQSKVKTSPPTSHEHSNIKASPTAHRHSKGDAGHPSIATTHNHSTSK 185
Cdd:pfam17823   77 SAAHLNSTEVTAEHTPHGTDLSEPATRegAADGAASRALAAAASSSPSSAAQSLPAAIAALPSEAFSAPRAAACRANASA 156
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978     186 AATSPVTHTHGHSSATTSPVThthgHASVKTTSPTNTHEHSKANTGPSATATTHGHINVKTTHPVSHGHSGSST-----G 260
Cdd:pfam17823  157 APRAAIAAASAPHAASPAPRT----AASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTalaavG 232
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 6319978     261 PKSTAAAQDHSSTKTNPSVTHGH-TSVKDNSSATKGYSNTDSNSDRDVIPGSFRGMTGTDVNPVDPSVYTSTGPKSNVS 338
Cdd:pfam17823  233 NSSPAAGTVTAAVGTVTPAALATlAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDTMARNPAAPMGAQAQGPIIQVS 311
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
100-303 4.10e-04

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 44.52  E-value: 4.10e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978     100 VTSDVNPVSADTKSSSGPNATITTHGYSYVkTTTPAATSEqSKVKTSPPTSHEHsNIKASPTAHRHSKGDAGHPSIA-TT 178
Cdd:pfam05109  583 VTTPTPNATSPTVGETSPQANTTNHTLGGT-SSTPVVTSP-PKNATSAVTTGQH-NITSSSTSSMSLRPSSISETLSpST 659
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978     179 HNHSTSKAATSPVTH-THGHSSATTSPVTHTHGHASVKTTSPTNTHEHSKANTGPSATATTHGHINV-KTTHPVSHGHSG 256
Cdd:pfam05109  660 SDNSTSHMPLLTSAHpTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNSSTSTKPGEVNVtKGTPPKNATSPQ 739
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*..
gi 6319978     257 SSTGPKSTAAAQDHSSTKTNPSVTHGHTSVKDNSSATKGYSNTDSNS 303
Cdd:pfam05109  740 APSGQKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTEPTTDYGGDS 786
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
180-418 1.94e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 41.87  E-value: 1.94e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978     180 NHSTSKAATSPVTHTHGHSSAT--TSPVTHTH------------------GHASVKTTSPTNTHEHSKANTGPSATATTH 239
Cdd:pfam17823   59 NFCAATAAPAPVTLTKGTSAAHlnSTEVTAEHtphgtdlsepatregaadGAASRALAAAASSSPSSAAQSLPAAIAALP 138
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978     240 GHINVKTTHPVSHGHSGSSTGPKSTAAAQDHSSTKTNPSVTHGHTSVKDNSSATKGYSNTDSNSDRDVIPGsfRGMTGTD 319
Cdd:pfam17823  139 SEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPA--RGISTAA 216
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978     320 VNPVDPSVYTSTGPKSNVSSGMNAVDPSVYTDTSSKSADRRKYSGNTAT-------GPPQDTIKEIAQNVKMDESE---- 388
Cdd:pfam17823  217 TATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASaagtinmGDPHARRLSPAKHMPSDTMArnpa 296
                          250       260       270
                   ....*....|....*....|....*....|....*
gi 6319978     389 -----QTGLKNDQVSGSDAIQQQTMEPEPKAAVGT 418
Cdd:pfam17823  297 apmgaQAQGPIIQVSTDQPVHNTAGEPTPSPSNTT 331
PHA02694 PHA02694
hypothetical protein; Provisional
187-260 5.95e-03

hypothetical protein; Provisional


Pssm-ID: 177476  Cd Length: 292  Bit Score: 40.11  E-value: 5.95e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6319978    187 ATSPVTHTHGHSSATTSPVTHTHGHASvKTTSPTNTHEHSKANTGPSATATTHGHINVKTTHPVSHGHSGSSTG 260
Cdd:PHA02694    8 ASASANHAHGGNPQYPQYYSHNHGHEG-DRHDESENHIHITDDEHLVLSDDCLGNGASYCGHDHGHAGHGHEGG 80
PHA03255 PHA03255
BDLF3; Provisional
173-303 7.02e-03

BDLF3; Provisional


Pssm-ID: 165513 [Multi-domain]  Cd Length: 234  Bit Score: 39.50  E-value: 7.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978    173 PSIATTHNHSTSKAATSPVTHTHGHS-------SATTSPVTHTH-GHASVKTTSPTNTHEHSKANTGPSATATTHGHINV 244
Cdd:PHA03255   29 SSTASAGNVTGTTAVTTPSPSASGPStnqsttlTTTSAPITTTAiLSTNTTTVTSTGTTVTPVPTTSNASTINVTTKVTA 108
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 6319978    245 KTTHPVSHGhSGSSTGPKSTAAAQDHSSTKTNPSVTHGHTSVKDNSSatKGYSNTDSNS 303
Cdd:PHA03255  109 QNITATEAG-TGTSTGVTSNVTTRSSSTTSATTRITNATTLAPTLSS--KGTSNATKTT 164
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
78-298 7.23e-03

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 40.28  E-value: 7.23e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978      78 KHNKDSETphedTEADANRRANVTSDVNPVSADTKSSSGPNATiTTH--GYSYVKTTTPAATSEQsKVKTSPPTSHEHSN 155
Cdd:pfam05109  633 QHNITSSS----TSSMSLRPSSISETLSPSTSDNSTSHMPLLT-SAHptGGENITQVTPASTSTH-HVSTSSPAPRPGTT 706
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978     156 IKASPTAHRHSKGDAGH--------PSIATTHNHSTSKAATSPVTHTHGHSSATTSPVTHTHGHASVKTTSPTNTHehsk 227
Cdd:pfam05109  707 SQASGPGNSSTSTKPGEvnvtkgtpPKNATSPQAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTEPTTDY---- 782
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 6319978     228 anTGPSATATTHghinvktthpvshgHSGSSTGPKSTAAAQDHSSTKTNPSVTHGHTSVKDNSSATKGYSN 298
Cdd:pfam05109  783 --GGDSTTPRTR--------------YNATTYLPPSTSSKLRPRWTFTSPPVTTAQATVPVPPTSQPRFSN 837
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
158-374 9.03e-03

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 39.74  E-value: 9.03e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978   158 ASPTAHRHSKGDAGHPSIATTHNHSTSKAATSPVTHTHGHSSATTSPVTHThGHASVKTTSPTNTHEHSKANTGPSATAT 237
Cdd:COG3469   12 AGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTG-TTAASSTAATSSTTSTTATATAAAAAAT 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319978   238 ThghinvktTHPVSHGHSGSSTGPKSTAAAQDHSSTKTNPSVTHGHTSVKdNSSATKGYSNTDSNSDRDVIPGSFRGMTG 317
Cdd:COG3469   91 S--------TSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGS-TTTSGASATSSAGSTTTTTTVSGTETATG 161
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 6319978   318 TDVNPVDPSVYTSTGPKSNVSSGMNAVDPSVYTDTSSKSAdrrkysgnTATGPPQDT 374
Cdd:COG3469  162 GTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTT--------ATTTGPPTP 210
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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