|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.55e-168 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 472.00 E-value: 3.55e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 1 MNPQAKLVCTISLLMGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 81 TGQWDITQLTCPTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPTPLTIMAIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLMTTAVFLTLNSMKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIMALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWHVNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 629678118 321 VSPLIAILATTSLILLPISPMILTII 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
7.03e-138 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 395.33 E-value: 7.03e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 1 MNPQAKLVCTISLLMGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 81 TGQWDITQLTCPTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSlNPTPLTIMAIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLMTTAVFLTLNSMKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIMALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWHVNKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 629678118 321 -VSPLIAILATTSLILLPISPMILTII 346
Cdd:MTH00135 320 qLTLPLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.17e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 389.67 E-value: 1.17e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 1 MNPQAKLVCTISLLMGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 81 TGQWDITQLTCPTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPTPLTIMAIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLMTTAVFLTLNSMKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIMALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWHVNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 629678118 321 VSPLIAILATTSLILLPISPMILTII 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
6.19e-119 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 347.22 E-value: 6.19e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 1 MNPQAKLVCTISLLMGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 81 TGQWDITQLTCPTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPTPLTIMAIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLMTTAVFLTLNSMKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIMALLSLLSLFFYLRLAYCATITLPPhTTNHMK-QWHVNK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQFEN 319
|
330 340
....*....|....*....|....*..
gi 629678118 320 P-VSPLIAILATTSLILLPISPMILTI 345
Cdd:MTH00105 320 TkPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.24e-100 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 299.96 E-value: 2.24e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 1 MNPQAKLVCTISLLMGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 81 TGQWDITQLTCPTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPTPLTIMAIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLMTTAVFLTLNSMKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIMALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWHVNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 629678118 321 VSPLIAILATTSLILLPISPMILTII 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
2.39e-84 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 259.09 E-value: 2.39e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 1 MNPQAKLVCTISLLMGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWH 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 81 TGQWDITQLTCPTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPTPLTIMAIL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLMTTAVFLTLNSMKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIMALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWHVNKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 629678118 321 VSPLIAILATTSLILL 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
3.34e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 193.89 E-value: 3.34e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 1 MNPQAKLVCTISLLMGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 81 tgqwdITQLTCPTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNptpLTIMAIL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNNF---IIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLMTTAVFLTLNSMKTLKLSTLMTTWTKTPAL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIMALLSLLSLFFYLRLAYCAtITLPPHTTNHMKQWHVNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....*
gi 629678118 321 VSPLIaILATTSLILLPISPMILTI 345
Cdd:MTH00160 312 SLILN-FLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-275 |
1.84e-49 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 168.14 E-value: 1.84e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 13 LLMGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWHTGQWDITqltcp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 93 tscLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNP-TPLTIMAILSAALGGWMGLN 171
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 172 QTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLMTTAVFLTLnSMKTLKLSTLMTTWTKTPALSATLMLTLLSL 251
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSL-WSGDSGSMKDLGSLKPSYKTGLSIISLLLSL 243
|
250 260
....*....|....*....|....
gi 629678118 252 AGLPPLTGFLPKWLIIQELTKQSM 275
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSP 267
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-275 |
2.58e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 168.03 E-value: 2.58e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 12 SLLMGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSmtnawhTGQWDITQLTC 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 92 PTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPTPLTIMAILSAALGGWMGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 172 QTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLMTTAVFLTLNSMKTLKLSTLMTTWTKTPALSATLMLTLLSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260
....*....|....*....|....
gi 629678118 252 AGLPPLTGFLPKWLIIQELTKQSM 275
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSM 271
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-270 |
2.09e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 147.13 E-value: 2.09e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 11 ISLLMGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWHTgqwditqLT 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------YL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 91 CPTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPfaLFFMTAQSLNPTPLTIMAILSAALGGWMGL 170
Cdd:MTH00197 78 SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 171 NQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLMTTAVFLTLNSMKTLKLSTLMTTWTKTPALSATLMLTLLS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260
....*....|....*....|
gi 629678118 251 LAGLPPLTGFLPKWLIIQEL 270
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSL 255
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-283 |
5.43e-33 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 127.54 E-value: 5.43e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 14 LMGSTITLSSNHWVMAWTGLEINTLAILPLIA-KSHHPRSIEAATKYFLVQAAASALILF-SSMTNAWhTGQWDITQL-- 89
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLNLAGIaa 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 90 ---TCPTSCLILTTAIAM-------KLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALF-------FMTAQSLNPT 152
Cdd:COG1007 191 alaAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALlrllveaFPGLAADWQL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 153 PLTIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLAL--LNFYL--YVLMTTAVFLTLNSMK----- 223
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLLSrkgge 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 224 TLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIMA 283
Cdd:COG1007 351 AEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAV 410
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
7.34e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 119.75 E-value: 7.34e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 13 LLMGSTITLSSNHWVMAWTGLEINTLAILPLIA-KSHHPRSIEAATKYFLVQAAASALILFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAqNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 79 WHTGQWDITQLTCPTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTaqSLNPTPLTIMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSI--GLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 159 ILSAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVY----SPKLALLNFYLYVLMTTAVFLTLNSMKTLK--LSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIgsfeSIQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270
....*....|....*....|....*....|....*
gi 629678118 233 TWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
5.77e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 113.18 E-value: 5.77e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 23 SNHWVMAWTGLEINTLAILPLIA-KSHHPRSIEAATKYFLVQAAASALILFSSMTNAWHTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 91 CPTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLL-STALKFPPFALFFMTAQSLNPTP-----LTIMAILSAAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIRRSLLYLPSSPfiqqiLLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 165 GGWMGLNQTQTRKILAFSSISHLGWMTIIL----VYSPKLALLNFYLYVLMTTAVFLTLNS-----MKTLKLSTLMTTWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSviyrrVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 629678118 236 KTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
7.00e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 115.88 E-value: 7.00e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 13 LLMGSTITLSSNHWVMAWTGLEINTLAILPLIA-KSHHPRSIEAATKYFLVQAAASALILFSSMTNAWHTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 88 QLTCPTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPtpLTIMAILSAALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNV--VLICAVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 168 MGLNQTQTRKILAFSSISHLGW----MTIILVYSPKLALLNFYLYVLMTTAVFLTLNSMKTLK--LSTLMTTWTKTPALS 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRKNPVIA 343
|
250 260
....*....|....*....|....*.
gi 629678118 242 ATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
22-282 |
1.22e-25 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 106.83 E-value: 1.22e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 22 SSNHWVMAWTGLEINTLAILPLIA-KSHHPRSIEAATKYFLVQAAASALIL--------------FSSMTNAWHTGQWDI 86
Cdd:PRK05777 121 SANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKALADGSGNS 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 87 TQLTcpTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFA----LFFMTAQSLNPT---PLTIMAI 159
Cdd:PRK05777 201 LLLL--FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAvllrLLVVAFGGLSEDwqqVLAIIAI 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 160 LSAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLAL--LNFYL--YVLMTTAVFLTLNSMKT-LKLSTLMTTW 234
Cdd:PRK05777 279 ASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFGVISLLRRkGGEAESISDF 358
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 629678118 235 T----KTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIM 282
Cdd:PRK05777 359 AglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIG 410
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-282 |
1.48e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 100.79 E-value: 1.48e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 14 LMGSTITLSSNHWVMAWTGLEINTLAILPLIA-KSHHPRSIEAATKYFLVQAAASALILFSSMTNAWHTGQWDITQLT-- 90
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLlf 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 91 ----------CPTSCLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALF---FMTAQSLNPTPLTIM 157
Cdd:TIGR01770 192 lsngmlnislLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFlrlFLYILFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 158 ----AILSAALGGWMGLNQTQTRKILAFSSISHLGW--MTIILVYSPKLALLNFYL--YVLMTTAVFLTLNSMKTLK--- 226
Cdd:TIGR01770 272 laiiAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYilIGLLAGTLEGIKAVLFYIfiYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 629678118 227 ---LSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIM 282
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIA 410
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-283 |
1.50e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 94.83 E-value: 1.50e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 13 LLMGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWHTGQWDITQLTC- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 92 ---------PTSCLILTTAIAMKLGLAPFHFWFPEVL-QGCSLTTGLLLSTALKFPPFAL--FFMTAQSLNPTP-----L 154
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYpAAPSPVSALLSGLLTKVGVYAIlrVLTLLFGADPALflgtlL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 155 TIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYV----LMTTAVFLT----LNSMKTLK 226
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAagaiERATGTRD 355
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 629678118 227 LSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIMA 283
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLL 412
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
5.11e-18 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 84.72 E-value: 5.11e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 50 PRSIEAATKYFLVQAAASALILF-SSMTNAWHTGQwdiTQLTCPTSCLILTTA-------------IAMKLGLAPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLSAIALALITSPSlglalalvfviagIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 116 PEVLQGCSLTTGLLLSTALKFPPFAL---FFMTAQSLNPTP----LTIMAILSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEQwkllFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 189 WMTIILVYSPK--LALLNFYL--YVLMTTAVF--LTLNSMKT--LKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGF 260
Cdd:PRK02504 314 FVMIGLVAGTEagYASMVFYLlaYLFMNLGAFacVILFSLRTgtDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGF 393
|
...
gi 629678118 261 LPK 263
Cdd:PRK02504 394 FGK 396
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
6.60e-18 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 84.29 E-value: 6.60e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 51 RSIEAATKYFLVQAAASALIL--FSSM--TNAWHTGQWDI------TQLTCPTSCLI----LTTAIAMKLGLAPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLygLSGGEIELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 117 EVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPT-------PLTIMAILSAALGGWMGLNQTQTRKILAFSSISHLGW 189
Cdd:CHL00049 239 DVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFssnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGY 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 190 MTIILV-------YSPKLALLNFYLYVLMTTAVFLTLNSMK--TLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGF 260
Cdd:CHL00049 319 VIIGIIvgdsndgYASMITYMLFYIFMNLGTFACIVLFGLRtgTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGF 398
|
...
gi 629678118 261 LPK 263
Cdd:CHL00049 399 FGK 401
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-267 |
4.34e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 82.21 E-value: 4.34e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 15 MGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSI---------EAATKYFLVQAAASALILFSSMTNAWHTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 84 --WDITQLTCPTS----------CLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALffMTAQSLNP 151
Cdd:MTH00198 279 mlGTILSATLETTnielrqgslgYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYIL--LTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 152 TPLTIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVL--MTTA-----VFLTLNSMKT 224
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVtyLVSAlasftVICTLEEFGT 436
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 629678118 225 L------------------KLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00198 437 RtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
2.00e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 64.73 E-value: 2.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 33 LEINTLAILPLIA-KSHHPRSIEAATKYFLVQAAASALILFS---------SMTNAWHTGQWDITQLTCPTSCL-ILTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 102 IAMKLGLAPFHFWFPEVLQGC--SLTTGLLLSTALKFPPFA--LFFMTAQSLNPTPL----TIMAILSAALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAApsSISAMLLVIKQAGLYALArvLFSIYGPAINLATVgwviIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 174 QTRKILAFSSISHLGWMTI-----ILVYSPklALLNFYLYVLMTTAVFLTLNS--MKTL------------------KLS 228
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLglgvgLAALGD--PAMASYGEIALAGGIYHIVNHalYKALlfltagaviyetgtrnlnELG 387
|
250 260 270
....*....|....*....|....*....|....*...
gi 629678118 229 TLMTTWTKTpalSATLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 388 GLARTMPKT---TIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-282 |
5.51e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 63.36 E-value: 5.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 33 LEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFS-SMTNAwHTGQWDITQL--------TCPTSCLILTTAIA 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLagalaenpTVVTAFGFVLLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 104 MKLGLAPFHFWFPEVLQGCSLTTGLLLS-TALKFPPFALF----------FMTAQSLNpTPLTIMAILSAALGGWMGLNQ 172
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVYALIriyftvfggdFRFALGLG-WLLAVLALLSMLVGSLAALGQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 173 TQTRKILAFSSISHLGWMTIILVYSPKLALLN--FYL--YVLMTTAVFLTLNSM----KTLKLSTLMTTWTKTPALSATL 244
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLAAGAIevtyGTRRLSELSGLGRRMPLTAAAF 372
|
250 260 270
....*....|....*....|....*....|....*...
gi 629678118 245 MLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIM 282
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVL 410
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-267 |
7.31e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 63.18 E-value: 7.31e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 49 HPRSIEAATKYFLVQAAASALILFSSMTNAWHTGQW-----DITQLTCPTS-----CLILTTAIAMKLGLAPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 119 LQGCSLTTGLLLSTALK------FPPFALFFMTAQSLNPTP-LTIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMT 191
Cdd:COG1008 236 HVEAPTAGSVLLAGVLLkmggygLLRFALPLFPEASAYFAPlLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 192 I-ILVYSP---KLALLNFYLYVLMTTAVFLTL----NSMKTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPK 263
Cdd:COG1008 316 LgIFALNPlglQGAVLQMVSHGLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGE 395
|
....
gi 629678118 264 WLII 267
Cdd:COG1008 396 FLVL 399
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
3.79e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 60.72 E-value: 3.79e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 50 PRSIEAATKYFLVQAAASALILFSSMTNAWHTGQW----DITQLTCPTSC-----LILTTAIAMKLGLAPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 120 QGCSLTTGLLLSTALKFPPFALF------FMTAQSLNPTPLTIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTII 193
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLrfnlplFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 194 LVYSPKLALLNFYLYV----LMTTAVFLTL----NSMKTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:TIGR01972 312 IFSFNELGISGAVFQMishgLITAALFLLVgvlyERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
...
gi 629678118 266 IIQ 268
Cdd:TIGR01972 392 ILL 394
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-282 |
3.06e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.08 E-value: 3.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 34 EINTLAILPLIAKSHHpRSIEAATKYFLVQAAASALILFSSMTNAWHTGQWDIT-------QLTCPTSCLILTTAIA--- 103
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFALIVFLFLLafg 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 104 -MKLGLAPFHFWFPEVLQGCSLTTGLLLSTAL-KFPPFALF-----FMTAQSLN--------PTPLTIMAIL---SAALG 165
Cdd:PRK08668 207 vAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLsKLGAYGFLlvlyvLPGTKLFSefgtyrgvPLFNYILAWLgniSIIVG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 166 GWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKL----ALLNFYLYVLMTTAVFLTLNSM----KTLKLSTLMTTWTKT 237
Cdd:PRK08668 287 TLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLgfagGLFHVFNHALFKGLFFLIFAAViyrtGTTKISEMGGLIEKM 366
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 629678118 238 PALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIM 282
Cdd:PRK08668 367 PFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
4.71e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 54.19 E-value: 4.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 33 LEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWHTGQWDITQLTC--PTSCLILTTAIAMKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 111 FHFWFPEVLQGCSLTTGLLLSTA-LKFPPFALFFMTAQSLNPTP-LTIMAILSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVvVKAGVFPLVRCALDVPGLDLiVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 189 WmtiiLVYSPKLALLNFYLYVLMTTAVFL---TLNSMKTLKL-STLMTTWTKTPalsatLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK07234 283 F----ILAAPLVGGLYALAHGLVKSTLFLcagALPSRNFTELiSQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKV 353
|
....*..
gi 629678118 265 LIIQELT 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
148-283 |
5.01e-08 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 54.39 E-value: 5.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 148 SLNPTPLTIMAILSAA---LGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFylyvLMTTAVFltlnsmKT 224
Cdd:COG1009 269 ALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFH----LLTHAFF------KA 338
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 629678118 225 L------------------KLSTLmttWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQE-LTKQSMAPAATIMA 283
Cdd:COG1009 339 LlflgagsvihatgtrdirKMGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVA 413
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-268 |
1.45e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 53.01 E-value: 1.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 20 TLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSS----------MTNAWHTGQWdiTQL 89
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGDGEMAILW--TEL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 90 TCPTSCL---ILTTAIAM-------KLGLAPFHFWFPEV-LQGCS----LTTGLLLSTALkfppFAL---FFMTAQSLNP 151
Cdd:PRK06458 202 LKHASLLdptLMKLAFVFlligfgtKVGLFPMHAWLPDAhSEAPSpvsaLLSGVLLNVAL----YAVlryYILIDAAIGS 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 152 TP----LTIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLM----TTAVFLT----L 219
Cdd:PRK06458 278 DFpgrlLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNhsltKSAIFFAsgnvL 357
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 629678118 220 NSMKTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 358 QKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
3.28e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 52.23 E-value: 3.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 96 LILTTAIAmKLGLAPFHFWFPEVLQGCSLTTGLLLSTALK----------FPPFAlffmTAQSLNPTPLtIMAILSAALG 165
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVkagiylvarlAPGFA----DVPVWRPTVL-VLGLATMLLG 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 166 GWMGLNQTQTRKILAFSSISHLGWMTIILVY-SPKLALLNFYLYV---LMTTAVFLTL----NSMKTLKLSTLMTTWTKT 237
Cdd:PRK12644 282 GWRALRQHDLKLILAYGTVSQLGFLTVLVGIgTRDAALAGLAMLLahaLFKAALFLVVgiidHSTGTRDIRKLSGLGRRQ 361
|
170 180
....*....|....*....|....*.
gi 629678118 238 PALSATLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 362 PVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
43-267 |
1.03e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 50.20 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 43 LIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWH----TGQWDITQL---TCPTSCLILT-----TAIAMKLGLAP 110
Cdd:PRK05846 150 LIGVWGGKNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLlnlPLPPGVQYWLflaffIAFAVKMPMFP 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 111 FHFWFPEVLQ-----GCSLTTGLLLST-ALKFPPFALFFMTAQSLNPTPLTI-MAILSAALGGWMGLNQTQTRKILAFSS 183
Cdd:PRK05846 230 LHTWLPDAHVqaptaGSVLLAGILLKMgAYGLLRFSLPLFPDASHEFAPIIItLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 184 ISHLGWMTIILVYSPKLALLNFYLYV----LMTTAVFLTL----NSMKTLKLSTLMTTWTKTPALSATLMLTLLSLAGLP 255
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMishgLSSAALFLLVgvlyDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
250
....*....|..
gi 629678118 256 PLTGFLPKWLII 267
Cdd:PRK05846 390 GTSGFVGEFLIL 401
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-270 |
1.23e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 50.14 E-value: 1.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 13 LLMGSTITLSSNHWVMAWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAA------SALILFSSMTNAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 87 TQLTCPT----------SCLILTTAIAMKLGLAPFHFWFPEV-LQGCSLTTGLLLSTALKFPPFALFFMTA-------QS 148
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 149 LNPTPLTIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLMTTAVFLTL--------N 220
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLffsagilhR 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 629678118 221 SMKTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK08676 351 QYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-263 |
2.52e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 49.27 E-value: 2.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 98 LTTAIAMKLGLA--------PFHFWFPEVLQGCSLTTGLLLSTA---------LKFPPFALFFMTAQSLnptpLTIMAIL 160
Cdd:PRK12650 206 LTTVVAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAvvkagiyllLRFSPVFHDVAVWNWL----LIIVGMI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 161 SAALGGWMGLNQTQTRKILAFSSISHLGWM-TIILVYSP---KLALLNFYLYVLMTTAVFLTLNSMK----TLKLSTLMT 232
Cdd:PRK12650 282 TALMGAVFAVQKTDLKKLTAYSTVSQLGWIvATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGS 361
|
170 180 190
....*....|....*....|....*....|.
gi 629678118 233 TWTKTPALSATLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 362 LWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
154-267 |
5.22e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 47.81 E-value: 5.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 154 LTIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYV----LMTTAVFLTLNSMK----TL 225
Cdd:PRK12662 282 FMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSISyhfgTT 361
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 629678118 226 KLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 362 KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-282 |
9.29e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 47.33 E-value: 9.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 34 EINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWHTGQWDITQ-----LTCPTSCLILTTAIAMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 109 A------PFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPTP--------LTIMAILSAALGGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGLSyfpsaqgvLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 175 TRKILAFSSISHLGWMTIILV----YSPKLALLNFYLYVLMTTAVFL----TLNSMKTLKLSTLMTTWTKTPALSATLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLAlgtpLGIVAGIFHAINHVIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270
....*....|....*....|....*....|....*.
gi 629678118 247 TLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIM 282
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIM 405
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
1.07e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 47.01 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 55 AATKYFLVQAAASALILFSSMTNAWHTGQWD------ITQLTCPTSCLILTTAI----AMKLGLAPFHFWFPEVLQGCSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQNLSLNTQLILLTGLllgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 125 TTGLLLSTAL-KFPPFAL------FFMTAQSLNPTPLTIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYS 197
Cdd:PRK07363 238 AVAILLGGVLaKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 198 PKLALLNFYLYVL---MTTAVFLTLNSMKTLKLST--------LMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK07363 318 TQLSLLGAVAQMIshgLILALLFHLVGIVERKVGTrdldvlngLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
|
..
gi 629678118 267 IQ 268
Cdd:PRK07363 398 FQ 399
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
43-266 |
2.53e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 45.85 E-value: 2.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 43 LIAKSHHPRSIEAATKYFLVQAAASALILFSSMTNAWHTGQWDITQLTCPTSCLILTT----------AIAMKLGLAPFH 112
Cdd:PRK06473 146 LIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTqllllapilvGFGIKIPLVPFH 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 113 FWFPEVLQGCSLTTGLLLS-TALKFPPFAL------FFMTAQSLNPTPLTIMAILSAALGGWMGLNQTQTRKILAFSSIS 185
Cdd:PRK06473 226 TWLPDAHVEASTPVSVLLAgVLLKLGTYGLlrfgvgLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIG 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 186 HLGWMTIILVYSPKLALLNFY-----------LYVLMTTAVFLTLNSMKTLKLSTLMTTWTKTPALSATLMLTLLSLAGL 254
Cdd:PRK06473 306 HMGYILLAAAAATPLSILAAVfqmishglisaLLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGI 385
|
250
....*....|..
gi 629678118 255 PPLTGFLPKWLI 266
Cdd:PRK06473 386 PGMVGFIAEFLV 397
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-266 |
3.20e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 45.68 E-value: 3.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 110 PFHFWFPEVLQGCSLTTGLLLS-TALKfppfALFFMTAQsLNP---------TPLTIMAILSAALGGWMGLNQTQTRKIL 179
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSaTMVK----AGIYLLAR-LNPvlggtplwqTILPLFGGLTMLTGALLAVRQTDLKLIL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 180 AFSSISHLGWMTIILVYSPKLALLNFYLYV----LMTTAVFLTLNSMK----TLKLSTLMTTWTKTPALSATLMLTLLSL 251
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSM 367
|
170
....*....|....*
gi 629678118 252 AGLPPLTGFLPKWLI 266
Cdd:PRK12647 368 AGLPPLFGFLAKELI 382
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
3.37e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 45.35 E-value: 3.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 33 LEINTLAILPLIAKSHHPRSIEAATKYFLVQAAAS------ALILFSSMTNAWHTGQWDITQLTCPTSCLILTTAIAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 107 GLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPTPLTI------MAILSAALGGWMGLNQTQTRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIgyvgavMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 181 FSSISHLGWMTIILVYS---PKLALLNFYLYVL----MTTAVFLTLN----SMKTLKLSTLMTTWTKTPALSATLMLTLL 249
Cdd:PRK06525 302 YSTITQLGYMFFGLSLAilgSRLALEGSIAYIFnhafAKSLFFLVAGalsySCGTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
250
....*....|....*...
gi 629678118 250 SLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIF 399
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-268 |
5.27e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 44.94 E-value: 5.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 103 AMKLGLAPFHFWFPEVLQG-----CSLTTGLLLSTALK--FPPFALFFMTAQSLNPTPLTIMAILSAALGGWMGLNQTQT 175
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAppiaiAALFGALLTKVGVYaiARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 176 RKILAFSSISHLGWMTIILVYSPKLALLN--FYL--YVLMTTAVFLTLNSMKTL-------KLSTLMTTWtktPALSATL 244
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGMIGaiYYLihDMIVKAALFLLIGIMIKItgttdlkKMGGLIKRY---PVLGWMF 376
|
170 180
....*....|....*....|....
gi 629678118 245 MLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07691 377 FIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-270 |
5.96e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 44.72 E-value: 5.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 55 AATKYFLVQAAASALILFSSMTNAWHTGQWDITQLTCPT-----SCLILTTAIAMKLGLAPFHFWFPEVLQGC-----SL 124
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPASpsnvsAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 125 TTGLLLSTAL-KFPPFALFFMTAQSLNPTPLTIMAILSAALGGWMGLNQTQTRKILAFSSISHLG--------WMTIILV 195
Cdd:PRK08667 243 MSGVMLKVAVyGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVY 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 196 YSPKLALLNF-------YLYVLMTTAVFLTLNSM----KTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 323 GLDTLALLALggalfhsLNHALFKSLLFLTAGSVvhatGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASEL 402
|
....*.
gi 629678118 265 LIIQEL 270
Cdd:PRK08667 403 LLYESF 408
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
90-268 |
6.93e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 44.56 E-value: 6.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 90 TCPTSCLILTTAIAMKLGLAPFhFWFPEVLQGCSLTTGLLLSTALK-------FPPFALFFMTAQSLNPTPLTIMAILSA 162
Cdd:PRK12663 205 TLTTIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITM 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 163 ALGGWMGLNQTQTRKILAFSSISHLGWMTIilvyspKLALLN--------FYLY--VLMTTAVFLTLNSMKTL----KLS 228
Cdd:PRK12663 284 VIGALGALAYKDIRRIAGYQVISSIGFILL------GLALGTpagingaiFYLVhdMVVKTALFLIAGSLVRLtgyrSLQ 357
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 629678118 229 TLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12663 358 YLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
105-268 |
7.99e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 44.56 E-value: 7.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 105 KLGLapfHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPTPLTIMAI-----LSAALGGWMGLNQTQTRKIL 179
Cdd:MTH00032 241 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItifgaLTAFFAATVGLVQNDLKKVI 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 180 AFSSISHLGWMTIILVY--SPKLALLNFYLYVLMTTAVFL---------TLNSMKTLKLSTLMTTwtkTPALSATLMLTL 248
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLsagsvihstTVDEQDMRKMGGLIHS---IPFTYTMMLIGS 394
|
170 180
....*....|....*....|
gi 629678118 249 LSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 395 FSIMGLPYLTGFYSKDLILE 414
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-192 |
1.18e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 43.87 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 55 AATKYFLVQAAASALILFSSMTNAWHTGQ--WDITQLTC---PTSCLILT-----TAIAMKLGLAPFHFWFPEVLQGCSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 629678118 125 TTGLLLS-TALKFPPFALFFMTAQSLNPT------PLTIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTI 192
Cdd:PRK12561 218 PVSMILAgVLLKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLL 292
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
295-340 |
1.32e-04 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 39.16 E-value: 1.32e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 629678118 295 RLAYCATITLPPHTTNHMKQWHVNKPV-SPLIAILATTSLILLPISP 340
Cdd:pfam06444 5 RLSYSTTLTLFPNTNNSKMKWRFNSTKnTLLLPTLTTLSILLLPLTP 51
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-283 |
2.02e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 42.88 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 11 ISLLMGSTITLSSNHWVMaWTGLEINTLAILPLIAKSHHPRSIEAATKYFLVQAAASALILFSSMT---NAWHTGQW-DI 86
Cdd:PRK06589 124 LTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTKTGNLDFvSG 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 87 TQLTCPTSCLILTTAIAM--KLGLAPFHFWFPEVLQGCS-----------LTTGLLLSTALKFPPFALFFMTAQSLNPTP 153
Cdd:PRK06589 203 GLFSKNQSIILLLMFIYGiaKTAIFPVHSWLPAAMVAHYpvsallhavivVKTGLFCIYKILLYIFGLSYLQRIFAEFNW 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 154 LTIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMT----IILVYSPKLALLNFYLYVLMTTAVFLTLNSMKTLK--- 226
Cdd:PRK06589 283 LIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsafILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKked 362
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 629678118 227 -LSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPAATIMA 283
Cdd:PRK06589 363 qVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVM 420
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-274 |
2.74e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.86 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 15 MGSTITLSSNHWVMAWTGLEINTLAILPLIAKshHPRSIEAATKYFLVQAAASALILFSSMTNAWHTGQWDITQLTCPTS 94
Cdd:PRK06459 83 LGMAIVLTSDNYLLFLAGWEIMTIPSYVAIAL--TKKNKRPAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSPVP 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 95 CLILTTAIAMKLGLAPFHF--WFPE-----------VLQGCSLTTGLLLSTALkfppfaLFFMTAQSLNPTPLTIMAI-- 159
Cdd:PRK06459 161 LILASFGFIIKMGMMPFLVseWLPIahgnapsnfsaILSATMTLMGVYGILKM------TILTQTIPIGYFGLTILAIga 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 160 LSAALGGWMGLNQTQTRKILAFSSISHLGWM-----TIILVYSPKLALLNFYLYVLMT---------TAVFLTLNSMKTL 225
Cdd:PRK06459 235 FSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILysfahsvakTGLFLSSGLQEKQ 314
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 629678118 226 KLSTLMTTWTKTPALSATLMLtlLSLAGLPPLTGFLPKWLIIQELTKQS 274
Cdd:PRK06459 315 SITYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESLFMFA 361
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
3.37e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 42.22 E-value: 3.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 101 AIAMKLGLAPFHFWFPEV-----LQGCSLTTGLLLST---ALKFPPFALFFMTAQSLNPTpLTIMAILSAALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLggyGLVRLSWPILPLGAQNLAPA-VIAMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 173 TQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYVLMTTAVFLTLNSMKTLKLSTLMTTWTK--------TPALSATL 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKyyrglsitMPIWGTIM 397
|
170 180
....*....|....*....|...
gi 629678118 245 MLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
5.34e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 41.74 E-value: 5.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 48 HHPRSIEAATKYFLVQAAASALILFSSMTNAWHTGQWDITQL--------TCPTSCLILTTAIAMKLGLA------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATIlqdselieNIKGHPLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 114 WFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPTP-----LTIMAILSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEawfilVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 189 WMTIILVYSPK------LALLNFYLYVLMTTAVFLTL------NSMKTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLLNHATFKACLFLvagivaHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 629678118 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
1.34e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 40.51 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 110 PFHFWFPEVLQGCSLTTGLLLS-TALKFPPFALFFMTA----QSLNPTPLTIMAILSAALGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSaTMVKAGIFLLFRFTPllglSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 185 SHLGW-MTII-----LVYSPKLALLNFY-------LYVLMTTAVFLTLNSMK---------TLKLSTLMTTWTKTPALSA 242
Cdd:PRK12646 308 SQLGMiMAMVgigggYAQHQQDAIASIYvfvlfaaLFHLMNHAIFKCALFMGvgiidheagTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|
gi 629678118 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
1.42e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 40.34 E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 96 LILTTAIAMKLGLAPFHFWFPEvlqgcSLTTGLLLSTALkfppFA----------------LFFmTAQSLNpTPLTIMAI 159
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPD-----SYPTAPAPVTAV----FAglltkvgvyaiirthtLLF-PGGGLD-TLLMVVAL 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 160 LSAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLNFYLYV----LMTTAVFLTLNSMK----TLKLSTLM 231
Cdd:PRK12665 282 LTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTLFLVVGLIErqagSSSLRRLG 361
|
170 180 190
....*....|....*....|....*....|....*..
gi 629678118 232 TTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 362 GLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-260 |
1.43e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 40.46 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 55 AATKYFLVQAAASALILFSSMTNAWHTG--QWDIT-----------QLTCPTSCLIlttAIAMKLGLAPFHFWFPEVLQG 121
Cdd:PRK02546 166 AATKFILYTAGSSLFILLAALAMAFYGDtpTFDMTalaakdfglgfQLLCYAGLLI---AYGVKLPIVPLHTWLPDAHGE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 122 CSLTTGLLLS-TALKFPPFALFFMTAQSLNPTP---------LTIMAILSAALGGWMGLNQTqtRKIlAFSSISHLGWMT 191
Cdd:PRK02546 243 ATAPVHMLLAgILLKMGGYALLRMNAGMLPDAHaqfapllivLGVVNIIYAALTSFAQRNLK--RKI-AYSSISHMGFVL 319
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 629678118 192 IILVYSPKL----ALLNFYLYVLMTTAVFL----TLNSMKTLKLSTLMTTWTKTPALSAtlMLTLLSLA--GLPPLTGF 260
Cdd:PRK02546 320 IGIGSFTDLgtsgAMLQMISHGLIGASLFFlvgaTYDRTHTLMLDEMGGVGQKMRKMFA--MWTACSLAslALPGMSGF 396
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-268 |
2.01e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 40.06 E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 95 CLILTTAIAMKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFALFFMTAQSLNPTPLTIMAI-----LSAALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtivgsLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 170 LNQTQTRKILAFSSISHLGWMTIILVYSpklallnFY---LYVLMTTAVF---LTLNSMKTLKLSTLMTTWTKTPALSAT 243
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACGLS-------HYsisLFHLMNHAFFkalLFLSAGSVIHALSDEQDMRKMGGLISF 365
|
170 180 190
....*....|....*....|....*....|..
gi 629678118 244 LMLTL-------LSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00020 366 LPLTYiffligsLSLMGFPYLTGFYSKDLILE 397
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
143-268 |
3.40e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 39.36 E-value: 3.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 143 FMTAQSLNPTPLTIMAILSAALGGWMGLNQTQTRKILAFSSISHLGWMTIILVYS-PKLALLNFYLYVLMTTAVFLTLNS 221
Cdd:MTH00207 235 FLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVCAGS 314
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 629678118 222 M-----KTLKLSTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 315 LihshhHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
104-272 |
3.83e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 38.31 E-value: 3.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 104 MKLGLAPFHFWFPEVLQGCSLTTGLLLSTALKFPPFaLFFMTAQSLNPTPLTIMAILSAALGGWMGLNqtqTRKILAFSS 183
Cdd:MTH00091 69 MKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFL-LVLLQFFSKNFFFLLLFGLLICFFQMFLLKS---YKNLLILSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 184 ISHLGWMTIILVYS-PKLALLNFYLYVLMTtavfltlnsmktlklsTLMTTWTKTPALSATLMLTLLSLAGLPPLTGFLP 262
Cdd:MTH00091 145 TESFNWLILSFFFSfFNVFFLFFYYFLLML----------------FLIPKFNNVNKLNFVSWETLLVFMNLPFSVTFFV 208
|
170
....*....|
gi 629678118 263 KWLIIQELTK 272
Cdd:MTH00091 209 KIFSLSEILK 218
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
164-283 |
4.20e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 39.02 E-value: 4.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 164 LGGWMGLNQTQTRKILAFSSISHLGWMTIILVYSPKLALLnfylyvlmtTAVFLTLNSmKTLKLSTLMTT---------- 233
Cdd:PRK12648 284 LGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAV---------AAIFHIINH-ATFKASLFMAAgiidhetgtr 353
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 629678118 234 --------WTKTPaLSATL-MLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAP--------AATIMA 283
Cdd:PRK12648 354 dmrrlsglRRLMP-ITATLaMVAAAAMAGVPLLNGFLSKEMFFAETLDTHLLGsldwllpvAATLAG 419
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-278 |
4.75e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 38.65 E-value: 4.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 107 GLAPFHFWFPEVLQGCSLTTGLLLSTA-LKFPPFALFFMTAQSLNP-----TPLTIMAILSAALGGWMGLNQTQTRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAplwwgVALLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 629678118 181 FSSISHLG--------WMTIILVYSPKLALLNFY--LYVLMTTAVFltlnsmKTLKLSTLMTTWTKT------------- 237
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLF------KSVLFLGAGSVWFRTghrdieklggigk 348
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 629678118 238 --PALSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQSMAPA 278
Cdd:PRK08042 349 kmPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGA 391
|
|
| |
