|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 701.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 1 MLKILLPTIMLLPMTLLSPLKFIWTNATAHSLLIATLSLQWLTPTYYPHKNLTQWTGIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 81 QNHLYHEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 161 LVAILYLYMQIGTLHLMMLNLTHPTLTNSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 241 YGIMRFTTLTHPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTAT 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430
....*....|....*....|....*....|....*...
gi 628971412 401 LLTASYTLFMLLMTQRGTLPNHITTIQNSNTREHLLMT 438
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMT 438
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 577.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 1 MLKILLPTIMLLPMTLLSPLKFIWTNATAHSLLIATLSLQWLTPTYYPHKNLTQWTGIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 81 QNHLYHEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 161 LVAILYLYMQIGTLHLMMLNLTHPTLTNSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 241 YGIMRFTTLTHPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTAT 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430
....*....|....*....|....*....|....*...
gi 628971412 401 LLTASYTLFMLLMTQRGTLPNHITTIQNSNTREHLLMT 438
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMA 438
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 570.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 1 MLKILLPTIMLLPMTLLSPLKFIWTNATAHSLLIATLSLQWLTPTYYPHKNLTQWTGIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 81 QNHLYHEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 161 LVAILYLYMQIGTLHLMMLNLTHPTLTNSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 241 YGIMRFTTLTHPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTAT 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430
....*....|....*....|....*....|....*...
gi 628971412 401 LLTASYTLFMLLMTQRGTLPNHITTIQNSNTREHLLMT 438
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLA 438
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
8.65e-166 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 475.21 E-value: 8.65e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 1 MLKILLPTIMLLPMTLLSPLKFIWTNATAHSLLIATLSLQWLT-PTYYPHKNLTQWTGIDQISSPLLVLSCWLLPLMIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 80 SQNHLYHEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 160 LLVAILYLYMQIGTLHLMMLNLTHPTLTNSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 240 GYGIMRFTTLTHPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 320 GLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTA 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430
....*....|....*....|....*....|....*....
gi 628971412 400 TLLTASYTLFMLLMTQRGTLPNHITTIQNSNTREHLLMT 438
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMA 439
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-438 |
4.99e-153 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 442.07 E-value: 4.99e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 3 KILLPTIMLLPMTLLSPLKFIWTNATAHSLLIATLSLQWL-TPTYYPHKNLTQWTGIDQISSPLLVLSCWLLPLMIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFkWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 82 NHLYHEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 162 VAILYLYMQIGTLHLMMLNLTHPTltnSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 242 GIMRFTTLTHPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 322 TSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTATL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430
....*....|....*....|....*....|....*..
gi 628971412 402 LTASYTLFMLLMTQRGTLPNHITTIQNSNTREHLLMT 438
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLF 434
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
2.49e-138 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 405.13 E-value: 2.49e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 1 MLKILLPTIMLLPMTLLSPLKFIWTNATAHSLLIATLSLQWLTPTYY-PHKNLTQWTGIDQISSPLLVLSCWLLPLMIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSsSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 80 SQNHLYHEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 160 LLVAILYLYMQIGTLHLMMLNLTHPTLTNSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 240 GYGIMRFTTL-THPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMIS 318
Cdd:MTH00044 241 GYGLIRLINLfSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 319 HGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GT 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 628971412 399 ATLLTASYTLFMLLMTQRGTLPNHITTIQNSNTREHLLMT 438
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIF 440
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
8.95e-114 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 341.75 E-value: 8.95e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 1 MLKILLPTIMLLPMTLLSPLKFIWTNatahSLLIATLSLQWLTPTYYPHKNLTQWTGIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQS----LLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 81 QNHLYHEPPTRKRTFILSLITIqpSIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 161 LVAILYLYMQIGTLHLMMLNLthptltNSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 241 YGIMRFTTLTHPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTAT 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430
....*....|....*....|....*....|....*..
gi 628971412 401 LLTASYTLFMLLMTQRGTLPNHITTIQNSNTREHLLM 437
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLL 425
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
6.73e-103 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 314.37 E-value: 6.73e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 1 MLKILLPTIMLLPMTLLSPlKFIWTNATAHSLLIATLSLQWLTPTYYPHKNLTQWTGIDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 81 QNHLYHEppTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 161 LVAILYLYMQIGTLHLMMLNLTHPT--LTNSWSnlllsLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKL 238
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSiyLMNLWW-----LITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 239 GGYGIMRFTTLTHPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMIS 318
Cdd:MTH00014 233 GGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIA 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 319 HGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GT 398
Cdd:MTH00014 313 HGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAI 392
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 628971412 399 ATLLTASYTLFMLLMTQRGTLPNHITTIQNSNTREHLLMT 438
Cdd:MTH00014 393 TSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMT 432
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
52-437 |
1.56e-99 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 304.45 E-value: 1.56e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 52 LTQWTGIDQISSPLLVLSCWLLPLMIMASQNHLyhEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLI 131
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSV--KLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 132 LITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTNSWSnllLSLALLTAFMVKAPLYG 211
Cdd:MTH00150 94 LILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGL---WGLLVFLAFLVKLPMYP 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSV 291
Cdd:MTH00150 171 FHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 292 SHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 371
Cdd:MTH00150 251 GHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPP 330
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 628971412 372 TTNLMAELTIMIALFNWSMLTIIL*GTATLLTASYTLFMLLMTQRGTLPNHITTIQNSNTREHLLM 437
Cdd:MTH00150 331 SLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLL 396
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-437 |
2.37e-96 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 297.28 E-value: 2.37e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 8 TIMLLPMTLLSPLKFIWTNATAHSLLIATLSLQWLTPTYYPHKNLTQWTGIDQISSPLLVLSCWLLPLMIMASQNhlYHE 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYK--VFK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 88 PPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYL 167
Cdd:MTH00205 83 SNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 168 YMQIGTLHLMMLnltHPTLTNSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFT 247
Cdd:MTH00205 163 NSLNFSLSMFFN---FPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRIT 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 248 TLTHPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLF 327
Cdd:MTH00205 240 SMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 328 CLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTATLLTASYT 407
Cdd:MTH00205 320 ALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYS 399
|
410 420 430
....*....|....*....|....*....|
gi 628971412 408 LFMLLMTQRGTLPNHITTIQNSNTREHLLM 437
Cdd:MTH00205 400 LYLYSQSQHGKVSSQISSFLAISEREYYIL 429
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-400 |
3.65e-75 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 237.21 E-value: 3.65e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 112 STELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTNSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 192 NLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFLTLALWGALM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 272 TSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLA-NTNYERTHSRILLLTRGLQP 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 628971412 351 LLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTAT 400
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
57-437 |
4.51e-74 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 240.75 E-value: 4.51e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 57 GIDQISSPLLVLSCWLLPLMIMASqnhlYHEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRW 136
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 137 GNqPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTNSWSNLLLSLALLtAFMVKAPLYGLHLWL 216
Cdd:COG1008 155 GG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPLTAQLLLFLAFFI-AFAVKVPMFPFHTWL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFL-TLALWGALMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:COG1008 233 PDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLaALGVIGIIYGALVALAQTDLKRLIAYSSVSHMG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 296 LVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNL 375
Cdd:COG1008 313 FVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGF 392
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 628971412 376 MAELTIMIALFNWSMLTIIL*GTATLLTASYTLFMLLMTQRGTLPNHITTIQNSNTREHLLM 437
Cdd:COG1008 393 VGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVL 454
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-433 |
4.96e-65 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 216.73 E-value: 4.96e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 57 GIDQISSPLLVLSCWLLPLMIMASqnhlYHEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILAS----WESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 137 GNqPERLSAGIYLLFYTLISSLPLLVAILYLYMQIG-TLHLM-MLNLTHPTLTNSWsnllLSLALLTAFMVKAPLYGLHL 214
Cdd:TIGR01972 150 GG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLeLLNLPLPFGVQTW----LFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFL-TLALWGALMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLaALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 294 MGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTT 373
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 628971412 374 NLMAELTIMIALFNWSMLTIIL*GTATLLTASYTLFMLLMTQRGTLPN-HITTIQNSNTRE 433
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNpEVAEFPDLNGRE 445
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
57-437 |
7.61e-64 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 214.30 E-value: 7.61e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 57 GIDQISSPLLVLSCWLLPLMIMASqnhlYHEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRW 136
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLAS----WEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 137 GnQPERLSAGIYLLFYTLISSLPLLVAILYLY----MQIGT---LHLMMLNLTHPTLTNSWsnlllsLALLTAFMVKAPL 209
Cdd:PRK05846 155 G-GKNRIYAATKFFLYTLLGSLLMLVAIIYLVvvyyNATGTfdiADLLNLPLPPGVQYWLF------LAFFIAFAVKMPM 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 210 YGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFL-TLALWGALMTSSICLRQTDLKSLIAY 288
Cdd:PRK05846 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIiTLGVIAIIYGALVALAQTDIKKLIAY 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 289 SSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMA 368
Cdd:PRK05846 308 SSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLG 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 628971412 369 LPPTTNLMAELTIMIALFNWSMLTIIL*GTATLLTASYTLFMLLMTQRGTLPNHITTIQNSNTREHLLM 437
Cdd:PRK05846 388 LPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLIL 456
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
57-437 |
4.76e-62 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 209.15 E-value: 4.76e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 57 GIDQISSPLLVLSCWLLPLMIMASQNHLYHepptRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRW 136
Cdd:MTH00204 80 AVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIW 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 137 GNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTL-HLMMLNLTHPTLTNSWsnllLSLALLTAFMVKAPLYGLHLW 215
Cdd:MTH00204 156 GSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKW----LLVGFFLSLAVKIPQIPFHIW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFLTL-----ALWGALMTSsiclRQTDLKSLIAYSS 290
Cdd:MTH00204 232 LPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMlsviaVIYGSLTTC----RQVDFKRLIAYSS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 291 VSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALP 370
Cdd:MTH00204 308 VAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 628971412 371 PTTNLMAELTIMIALFNWSMLTIIL*GTATLLTASYTLFMLLMTQRGTLPNHITTIQNSNTREHLLM 437
Cdd:MTH00204 388 LSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAI 454
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-410 |
3.22e-55 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 191.03 E-value: 3.22e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 57 GIDQISSPLLVLSCWLLPLMIMASQNHLYHepptRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRW 136
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 137 GNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMML-NLThptLTNSWSNLLLSLALLTaFMVKAPLYGLHLW 215
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALcCLK---IEKELQYFIFLGFFLS-LAIKIPKIPFHIW 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPF-LTLALWGALMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:MTH00217 229 LPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLiQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 295 GLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTN 374
Cdd:MTH00217 309 GLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCN 388
|
330 340 350
....*....|....*....|....*....|....*.
gi 628971412 375 LMAELTIMIALFNWSMLTIIL*GTATLLTASYTLFM 410
Cdd:MTH00217 389 FVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
58-433 |
1.99e-52 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 183.97 E-value: 1.99e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 58 IDQISSPLLVLSCWLLPLMIMASqnhlYHEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRWG 137
Cdd:MTH00226 100 VDGISIYFIILTGFIVPCSILIS----WHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 138 NQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGT---LHLMMLNLTHPTLTNSWsnllLSLALLTAFMVKAPLYGLHL 214
Cdd:MTH00226 176 SREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTtdyLTLASCSHVVSEQTQKW----IFLGIFLAMAVKIPIFPFHI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPL-STNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:MTH00226 252 WLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAH 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 294 MGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTT 373
Cdd:MTH00226 332 MGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSG 411
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 374 NLMAELTIMIALFNWSMLTIIL*GTATLLTASYTLFMLLMTQRGTLPNHITTIQNSNTRE 433
Cdd:MTH00226 412 NFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRRE 471
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
106-412 |
6.25e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 156.22 E-value: 6.25e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 106 IILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLYMqigtlhlmMLNLTHPT 185
Cdd:MTH00094 75 CLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFF--------FFSLCYFD 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 186 LTNSWsnlLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLthpLSTNLYYPFLTLA 265
Cdd:MTH00094 147 FFLSW---EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGS---LNFVYNNFWIIFS 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 266 LWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLT 345
Cdd:MTH00094 221 LLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFM 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 628971412 346 RGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTATLLTASYTLFMLL 412
Cdd:MTH00094 301 NSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
54-411 |
5.22e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 147.49 E-value: 5.22e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 54 QWT-GIDQISSPLLVLSCWLLPLMIMASQNhlyhepPTRKRTFILSLITIQPSI-ILAFSSTELTLFYISFEATLIPTLI 131
Cdd:PRK12561 52 EWSlGVDGLSMPLVLLSGLITTLSIFASWK------VTRKPRLFYFLMLVLYSAqIGVFLAQDLLLFFLMWELELVPVYL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 132 LITRWGNQpERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTNSWSnLLLSLALLTAFMVKAPLYG 211
Cdd:PRK12561 126 LISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALE-LLLYAGFLIAFGVKLPIFP 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFLTL-----ALWGALMTssicLRQTDLKSLI 286
Cdd:PRK12561 204 LHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAIlgvvnIIYGALNA----FAQDNVKRRL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 287 AYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTN 366
Cdd:PRK12561 280 AYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMAS 359
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 628971412 367 MALPPTTNLMAELTIMIALFN-------WSMLTIIL*GTATLLTASYTLFML 411
Cdd:PRK12561 360 LALPGMSGFVSELTVFLGITSsdvysstFRTITILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-406 |
1.50e-37 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 141.82 E-value: 1.50e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 58 IDQISSPLLVLSCWLLPLMIMASQNHLYHEPPTRKRTFILSLITIqpSIILAFSSTELTLFYISFEATLIPTLILITrWG 137
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLA--GMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 138 NQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTNSWSnLLLSLALLTAFMVKAPLYGLHLWLP 217
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLL-LAAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLY--YPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFlgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 296 LVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNL 375
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330 340 350
....*....|....*....|....*....|..
gi 628971412 376 MAELTIMIALFN-WSMLTIIL*GTATLLTASY 406
Cdd:COG0651 390 VSKWLLLQAALEaGAWLLAAVLLLSSLLTLAY 421
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-426 |
1.22e-34 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 135.21 E-value: 1.22e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 57 GIDQISSPLLVLSCWLLPLMIMASQNHLyheppTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRW 136
Cdd:PRK06473 76 GVDGLSLPLLVLNSLLTLIAIYSSDESI-----QRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 137 GNQpERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTNSwSNLLLSLALLTAFMVKAPLYGLHLWL 216
Cdd:PRK06473 151 GGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFL-TLALWGALMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:PRK06473 229 PDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 296 LVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL---QPLLPLMATWWLLANLTNMALPPT 372
Cdd:PRK06473 309 YILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGM 388
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 628971412 373 TNLMAELTIMIALFNWSMLTIIL*GTATLLTASYTLFMLLMTQRGTLPNHITTI 426
Cdd:PRK06473 389 VGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNL 442
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-411 |
1.98e-34 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 134.83 E-value: 1.98e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 45 TYYPHKNLTQWTGIDQISSPLLVLSCWLLPLMIMASQnhlyhePPTRK-RTFILSLITIQPSIILAFSSTELTLFYISFE 123
Cdd:PRK02546 72 SWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 124 ATLIPTLILITRWGNQpERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTNSWSNLLLSLALLtAF 203
Cdd:PRK02546 146 LELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQLLCYAGLLI-AY 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 204 MVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFL-TLALWGALMTSSICLRQTDL 282
Cdd:PRK02546 224 GVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 283 KSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLA 362
Cdd:PRK02546 304 KRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTAC 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 628971412 363 NLTNMALPPTTNLMAELTIMIAL-------FNWSMLTIIL*GTATLLTASYTLFML 411
Cdd:PRK02546 384 SLASLALPGMSGFVAELMVFVGFatsdaytLPFRVVVVFLAAVGVILTPIYLLSML 439
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-422 |
2.06e-30 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 123.28 E-value: 2.06e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 57 GIDQISSPLLVLSCWLLPLMIMASQnhlyhEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRW 136
Cdd:PRK07363 76 GVDGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 137 GNQpERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTNSwSNLLLSLALLTAFMVKAPLYGLHLWL 216
Cdd:PRK07363 151 GGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPflTLALWGA---LMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK07363 229 PDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTisvIYGALSAIAQKDIKRMVAYSSIGH 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 294 MGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGL-QPL--LPLMATWWLLANLTNMALP 370
Cdd:PRK07363 307 MGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMASAGIP 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 628971412 371 PTTNLMAELTIMIALFNWSMLTIIL*GTATLLTASYTLFMLLMTQRGTLPNH 422
Cdd:PRK07363 387 GLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNK 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-411 |
8.66e-29 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 118.51 E-value: 8.66e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 57 GIDQISSPLLVLSCWLLPLMIMASQnhlyhePPTRK-RTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITR 135
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSM 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 136 WGNQpERLSAGIYLLFYTLISSLPLLVAILY--LYM-QIGTLHLMML-NLTHPTLTNswsnLLLSLALLTAFMVKAPLYG 211
Cdd:CHL00011 155 WGGK-KRLYSATKFILYTAGGSIFLLIGVLGmgLYGsNEPTLNFETLaNQSYPVALE----ILFYIGFLIAYAVKLPIIP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFltLALWGALM---TSSICLRQTDLKSLIAY 288
Cdd:CHL00011 230 LHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPW--LVIVGAIQiiyAASTSLGQRNLKKRIAY 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 289 SSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMA 368
Cdd:CHL00011 308 SSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLA 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 628971412 369 LPPTTNLMAELTIMIA-------LFNWSMLTIIL*GTATLLTASYTLFML 411
Cdd:CHL00011 388 LPGMSGFVAELIVFFGiitsqkyLLMPKILITFVMAIGMILTPIYLLSML 437
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
7.99e-24 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 95.67 E-value: 7.99e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 1 MLKILLPTIMLLPMTLLSPLKFIWTNATAHSLLIATLSLQWLT-PTYYPHKNLTQWTGIDQISSPLLVLSCWLLPLMIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 628971412 80 SQNHLYHEPPTRKRTFILSLITIQPSIILA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-412 |
4.50e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 98.89 E-value: 4.50e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 58 IDQISSPLLVLSCWLLPLMIMASQNHLYHEppTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 138 NQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNL----------THPTLTNSWSNLLLSLALLTAFMVKA 207
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAkirglsfpltGGLAGNPPLALGVALALALWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 208 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRF-------TTLTHPLSTNLYYPFLTLALWGALMTSSICLRQT 280
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 281 DLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWL 360
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 628971412 361 LANLTNMALPPTTNLMAELTIMIALFNWSMLT---IIL*GTATLLTASYTLFMLL 412
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLpalVLLIASAISLVGYFRAWYSL 452
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-406 |
8.69e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 97.64 E-value: 8.69e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 109 AFSSTELTLFYISFEATLIPTLILITRWGNqPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMML---NLTHPT 185
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLSSYALVAMGGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagaLAENPT 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 186 LTnswsnlLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFT----TLTHPLSTNLYYPF 261
Cdd:PRK08375 201 VV------TAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfGGDFRFALGLGWLL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 262 LTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:PRK08375 275 AVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRR 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 628971412 342 LLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFN-WSMLTIIL*GTATLLTASY 406
Cdd:PRK08375 355 LSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
57-386 |
5.86e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 77.08 E-value: 5.86e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 57 GIDQISSPLLVLSCWLLPLMIMASQNHLYHEPPTRKRTFILSLITI-QPSIILAFSSTELTLFYISFEATLIPTLILITR 135
Cdd:PRK08667 74 HIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALfILSMLGVVASANTFSFLFFWEIMALSSFFLVMN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 136 WGNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTNSWsnlllsLALLTAFMVKAPLYGLHLW 215
Cdd:PRK08667 154 DYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVF------LLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRFttLTHPLSTNLYYPFLTLAL--WGALMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK08667 228 LPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLAgsISALLGVIYALKEHDLKGLLAYSSIEN 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 294 MGLV---IAASMIQTHW--------SFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLA 362
Cdd:PRK08667 306 IGIIlmgIGLYVIFGVYgldtlallALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVG 385
|
330 340
....*....|....*....|....
gi 628971412 363 NLTNMALPPTTNLMAELTIMIALF 386
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
84-412 |
1.85e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 74.99 E-value: 1.85e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 84 LYHEPPTRKRTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPLLVA 163
Cdd:PRK07234 85 FYCWESAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIG 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 164 ILYLYMQIGTLHLMMLNLTHPTltnswsnllLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGI 243
Cdd:PRK07234 164 AVLVYQANGTFAFSGLATADPE---------AFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 244 MRfttlTHPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIqthwsfsgAMILMISHGLTS 323
Cdd:PRK07234 235 VR----CALDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVK 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 324 SMLFCLANTNYERTHSRILLLTRGLQPLLPLmatwwLLANLTNMALPPTTNLMAELTIMIALFNWsmLTIIL*GTATLLT 403
Cdd:PRK07234 303 STLFLCAGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPW--QAIALNLAAVGTA 375
|
....*....
gi 628971412 404 ASYTLFMLL 412
Cdd:PRK07234 376 ASFWKFIFL 384
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-384 |
6.14e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 70.77 E-value: 6.14e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 108 LAFSSTELTLFYISFEATLIPTLILITRwGNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLT 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 188 nSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTnlyypFLTLALW 267
Cdd:PRK12665 205 -SGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGG-----LDTLLMV 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 268 GALMTSSI----CLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILL 343
Cdd:PRK12665 279 VALLTMVVgilgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLR 358
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 628971412 344 LTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIA 384
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEA 399
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
72-395 |
6.30e-13 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 70.34 E-value: 6.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 72 LLPLMI-MASQNHLYHEPPTRKRTFI-LSLItiqpSIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYL 149
Cdd:MTH00062 52 LLVLFLgLYSQVMFYNLLSGVSRFFLfLSLI----FSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYF 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 150 LFYTLISSLPLLVAILYLYMQIGTlhlmmLNLTHPTLTNSWSNLLLSLALLTaFMVKAPLYGLHLWLPKAHVEAPIAGSM 229
Cdd:MTH00062 128 LGYLLLTSLPLLLCLLYLSLVNGS-----FNFSDWGSDDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSI 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 230 LLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFLTLALWGALMTSSICLrqtDLKSLIAYSSVSHMGLVIAASMIQTHWSF 309
Cdd:MTH00062 202 FLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITACSEL---DGKRWLAFLSLSHILVPVLGLFVGDWSSI 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 310 SGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWS 389
Cdd:MTH00062 279 NLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVL 358
|
....*.
gi 628971412 390 MLTIIL 395
Cdd:MTH00062 359 VYLLFW 364
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-412 |
3.21e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 68.42 E-value: 3.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 206 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYP--FLTLALWGALMTSSICLRQTDLK 283
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGrlLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 284 SLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLAN 363
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 628971412 364 LTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTATLLTASYTLFMLL 412
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRV 435
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
93-411 |
1.61e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 65.93 E-value: 1.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 93 RTFILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRWgNQPERLSAGIYLLFYTLISSLPLLVAILYLY---- 168
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAIL-SARENIDAALKYIFIASTAMIFAFIGLIFLFsltr 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 169 --MQIGTLHLMMLnLTHPTLTNSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRF 246
Cdd:PRK08676 181 qaLGTGTLNWTEL-AAHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRL 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 247 TTLTHplSTNLYYPFLTLALWGALMTSSIC----LRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLT 322
Cdd:PRK08676 260 SALLR--QSGAAEQFSNVLIGLGIFSIAVAafsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLV 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 323 SSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSM-LTIIL*GTATL 401
Cdd:PRK08676 338 KSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVwLVLAVLLLLLL 417
|
330
....*....|
gi 628971412 402 LTASYTLFML 411
Cdd:PRK08676 418 AASSFAIFLL 427
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
95-411 |
1.63e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 66.70 E-value: 1.63e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 95 FILSLITIQPSIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTL 174
Cdd:PRK12646 112 FYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 175 HLM-MLNLTHPTLTNSWSNLLLSLALLTAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRFTTLTHp 252
Cdd:PRK12646 192 NITeILGQADHIKNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLG- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 253 LSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIaaSMI--------QTHWSFS--------GAMILM 316
Cdd:PRK12646 269 LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIM--AMVgigggyaqHQQDAIAsiyvfvlfAALFHL 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 317 ISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTnMALPPTTN--LMAEL-------TIMIALFN 387
Cdd:PRK12646 347 MNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMfldaltqTGQLSQFS 425
|
330 340
....*....|....*....|....*.
gi 628971412 388 WSMLTIIL*--GTATLLTASYTLFML 411
Cdd:PRK12646 426 LISMIIIVFigVIASIFTFTYALYMV 451
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
118-407 |
2.09e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.89 E-value: 2.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 118 FYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLtHPTLTNSWSNLLLSL 197
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAV-KMSENPTVVAKIALA 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 198 ALLTAFMVKAPLYGLHLWLPKAHVEAPiAGSMLLAALLLKLGGYGIMR--FTTLTHPLSTN-LYYPFLTLALWGALMTSS 274
Cdd:PRK08376 225 LFIAGLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARvlFSIYGPAINLAtVGWVIIILGCLTMFVGVA 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 275 ICLRQTDLKSLIAYSSVSHMG---------LVIAASMIQTHWSF---SGAMILMISHGLTSSMLFCLANTNYERTHSRIL 342
Cdd:PRK08376 304 MAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHIVNHALYKALLFLTAGAVIYETGTRNL 383
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 628971412 343 LLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIM--IALFNwSMLTIIL*GTATLLTASYT 407
Cdd:PRK08376 384 NELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFN-PILGVIAMIGSVLTLASFV 449
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
105-372 |
3.90e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 65.45 E-value: 3.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 105 SIILAFSSTELTLFYISFEATLIPTLILITRWGNQPErlSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHL-MMLNLT- 182
Cdd:PRK12650 122 AMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLsGILHSDv 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 183 ---HPTLTnswsnLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTnLYY 259
Cdd:PRK12650 200 waeKPGLT-----TVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAV-WNW 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 260 PFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHS 339
Cdd:PRK12650 274 LLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGT 353
|
250 260 270
....*....|....*....|....*....|...
gi 628971412 340 RILLLTRGLQPLLPLMATWWLLANLTNMALPPT 372
Cdd:PRK12650 354 RDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
93-412 |
1.69e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 62.91 E-value: 1.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 93 RTFILSLITIQPSIILAFSSTELTLFyISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPL-LVAILYLYMQI 171
Cdd:PRK06589 117 RFLFFFNLTILIGVLIALSSDLFTMF-VCYELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKT 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 172 GTLHLMMLNLThptltnSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTH 251
Cdd:PRK06589 195 GNLDFVSGGLF------SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIF 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 252 PLS-------TNLYYPFLtlALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSS 324
Cdd:PRK06589 269 GLSylqrifaEFNWLIFI--PIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKI 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 325 MLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFN----WSMLTIIL*GTAT 400
Cdd:PRK06589 347 CLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEqnqpWLSIIVMLVVIAS 426
|
330
....*....|..
gi 628971412 401 LLTASYTLFMLL 412
Cdd:PRK06589 427 SILSALYLLKIL 438
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
112-401 |
1.78e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 63.01 E-value: 1.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 112 STELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHL-MMLNLTHPTLTNSW 190
Cdd:PRK12647 114 SDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLsELLASGDVIREHPL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 191 SNLLLSLALLTAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRFttltHPLSTNLYYPFLTLALWGA 269
Cdd:PRK12647 194 YLAILLLVLGGAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLARL----NPVLGGTPLWQTILPLFGG 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 270 ---LMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTR 346
Cdd:PRK12647 268 ltmLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLG 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 628971412 347 GLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTATL 401
Cdd:PRK12647 348 GLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-327 |
7.46e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 61.17 E-value: 7.46e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 110 FSSTELTLFYISFEATLIPTLILITRwGNQPERLSAGIYLLFyTLISSLPLLVAILYLYMQIGTLHL-----MMLNLTHP 184
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFadisqGLINDTST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 185 TltnswSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGImrFTTLTHPLSTNLYYPFLT- 263
Cdd:PRK08668 193 G-----FALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGF--LLVLYVLPGTKLFSEFGTy 265
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 628971412 264 ---------LALWGAL---MTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLF 327
Cdd:PRK08668 266 rgvplfnyiLAWLGNIsiiVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
155-406 |
1.49e-09 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 59.78 E-value: 1.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 155 ISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLtNSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAAL 234
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLNMAHIAQLAGTI-DPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAF 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 235 LLKLGGYGIMRFTTLTHPLS--TNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGA 312
Cdd:PRK08377 248 VVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAG 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 313 MILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSML- 391
Cdd:PRK08377 328 VFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTw 407
|
250
....*....|....*
gi 628971412 392 TIIL*GTATLLTASY 406
Cdd:PRK08377 408 PVALVLGASVVEAVY 422
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-423 |
3.24e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 59.01 E-value: 3.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 115 LTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTNSWSNLL 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLTL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 195 LSLALLTAFMVKAPLYGLHLWLPKAhVEAPI-------------AGSmllaalllklggYGIMRFTTLTHpLSTNLYYPF 261
Cdd:COG1009 213 ILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTpvsallhaatmvkAGV------------YLLARLSPLFA-LSPVWLTVV 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 262 LTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQthwSFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRD 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 342 LLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTATL---LTASYTLFMLLMT---- 414
Cdd:COG1009 356 IRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgk 435
|
....*....
gi 628971412 415 QRGTLPNHI 423
Cdd:COG1009 436 PRPKTPKHP 444
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-371 |
4.77e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 58.42 E-value: 4.77e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 109 AFSSTELTLFYISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTN 188
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGD 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 189 SWSNLLLSLALLTAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFLTLALWG 268
Cdd:PRK12663 203 TATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAI 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 269 ALMTSSI-CLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRG 347
Cdd:PRK12663 282 TMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGG 361
|
250 260
....*....|....*....|....
gi 628971412 348 LQPLLPLMATWWLLANLTNMALPP 371
Cdd:PRK12663 362 LYRKEPLFGALFLILIFAIGGLPP 385
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-398 |
5.43e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.21 E-value: 5.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 119 YISFEATLIPTLILITRWGNQPERLSAGIYLLFYTlISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTNSWSNLLLSLA 198
Cdd:PRK12662 136 YVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGT-IGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 199 LLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMR---------FTTLTHPLSTnlyyPFLTLALWGA 269
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRivydvfkanFVFTTLPFNN----VFMILAALAI 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 270 LMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANT---NYERTHSRILLltr 346
Cdd:PRK12662 291 VFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL--- 367
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 628971412 347 GLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFN---WSMLTIIL*GT 398
Cdd:PRK12662 368 NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKsnaWIGLVVLLVGS 422
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
95-406 |
1.91e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 56.49 E-value: 1.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 95 FILSLITIQpSIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGI-YLLFYTLISSLpLLVAILYLYMQIGT 173
Cdd:TIGR01770 105 YILLLFALL-GIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGL-LLFGISLIYGFTGS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 174 LHLMMLNLTHPTLTNSWSNLLL-SLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMR-FTTLTH 251
Cdd:TIGR01770 183 LNFEDLLLFLSNGMLNISLLLLgIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRlFLYILF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 252 PLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTS----SMLF 327
Cdd:TIGR01770 263 GFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLS 342
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 628971412 328 CLANTNYERTHSriLLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTIIL*GTATLLTASY 406
Cdd:TIGR01770 343 LLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAF 419
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-380 |
2.82e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 56.12 E-value: 2.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 59 DQISSPLLVLSCWLLPLMIMASQNHLYHEPPTRKRTFILSLITIQpSIILAFSSTELTLFyISFEATLIPTLILITRWGN 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFL-MMVLVTSDNYLQLF-IGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 139 QPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLN---LTHPTLTNSWSNLLLSLALLTAFMV---------- 205
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESPLAPFAIigillligci 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 206 -KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMrftTLTHPLSTNLYYPFLTLALWGAL---MTSSICLRQTD 281
Cdd:MTH00032 237 gKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLM---IRSFPLFEKAPLTLLIITIFGALtafFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 282 LKSLIAYSSVSHMGLVIAasMIQTHWSFSGAMILMISHGLTSSMLFCLA-----NTNYERTHSRILlltRGLQPLLPLMA 356
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVL--IIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFTY 387
|
330 340
....*....|....*....|....*....
gi 628971412 357 TWWLLANLTNMALPPTT-----NLMAELT 380
Cdd:MTH00032 388 TMMLIGSFSIMGLPYLTgfyskDLILELT 416
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-386 |
6.63e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 54.57 E-value: 6.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 106 IILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFyTLISSLPLLVAILYLYMQIGTLHLMMLN--LTH 183
Cdd:PRK07691 121 VNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADISvkIAE 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 184 PTLTNSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFTTLTHPLSTNLYYPFLt 263
Cdd:PRK07691 200 LSAGQTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLI- 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 264 laLWGALMTSSI----CLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHS 339
Cdd:PRK07691 279 --LILALLTIIFgvigAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGT 356
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 628971412 340 RILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALF 386
Cdd:PRK07691 357 TDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTF 403
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
83-402 |
7.57e-08 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 54.60 E-value: 7.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 83 HLYHEPptRKRTFILSLITIQPSIILAFSSTELTLFyISFEATLIPTLILITRWGNqPERLSAGIYLLFYTLISSLPLLV 162
Cdd:PRK06525 106 HPVHEG--TGRYYAFLLLFIGAMAGLVYSSTLLGLL-LFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 163 AILYLYMQIGTLHLMMLNLTHPTLtnswsNLLLSLALLTAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAall 235
Cdd:PRK06525 182 AAATLFLQTGTFALSALSGLHGSL-----KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTpasaylhAASMVKV--- 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 236 lklGGYGIMRFTTLTHPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMG---LVIAASMIQTHWSFSGA 312
Cdd:PRK06525 253 ---GVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGymfFGLSLAILGSRLALEGS 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 313 MILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLT 392
Cdd:PRK06525 330 IAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEY 409
|
330
....*....|
gi 628971412 393 IIL*GTATLL 402
Cdd:PRK06525 410 WILLPAMVLL 419
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
203-386 |
6.46e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 51.81 E-value: 6.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRFT-TLTHPLSTNLYYPFLTLALWGALMTSSICLRQTD 281
Cdd:PRK06521 220 FGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVfDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHD 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 282 LKSLIAYSSVSHMGLVIAA---SMI--------QTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQP 350
Cdd:PRK06521 300 LKRLLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIR 379
|
170 180 190
....*....|....*....|....*....|....*.
gi 628971412 351 LLPLMATWWLLANLTNMALPPTTNLMAELTIMIALF 386
Cdd:PRK06521 380 RMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
75-323 |
2.76e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 46.26 E-value: 2.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 75 LMIMASQNHLYHEPPTRKRTFILSLITIQPSIILAfSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGI-YLLFYT 153
Cdd:COG1007 85 LVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 154 LISSLpLLVAILYLYMQIGTLHL--MMLNLTHPTLTNswsnllLSLALLTAFMV-----KAPLYGLHLWLPKAHVEAPIA 226
Cdd:COG1007 164 LSSGF-LLYGISLLYGATGSLNLagIAAALAAGGANS------PLLLLGLVLVLaglafKLSAVPFHMWTPDVYEGAPTP 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 227 GSMLLAALLLKLGGYGIMR-FTTLTHPLSTNLYYPFLTLA----LWGALMTssicLRQTDLKSLIAYSSVSHMGLVIAAS 301
Cdd:COG1007 237 VTAFLATAPKIAAFAALLRlLVEAFPGLAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGL 312
|
250 260
....*....|....*....|..
gi 628971412 302 MIQTHWSFSGAMILMISHGLTS 323
Cdd:COG1007 313 AAGTPLGVSAALFYLLAYLFMN 334
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
97-414 |
7.37e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 45.07 E-value: 7.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 97 LSLITIQpSIILAFSSTELTLFyISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHL 176
Cdd:MTH00020 117 LSLFTFL-MVVLVTSDNYLQLF-IGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDF 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 177 MMLnLTHPTLTNSWSNLLLSLALLTAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRFTTLTHPLST 255
Cdd:MTH00020 195 SSV-FNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLLIRSSPLFEQAPL 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 256 NLYYPFLTLALwGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIqTHWSFSgaMILMISHGLTSSMLFCLANT--- 332
Cdd:MTH00020 273 ALIIVTIVGSL-TVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGL-SHYSIS--LFHLMNHAFFKALLFLSAGSvih 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 333 --NYERTHSRIllltRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSMLTII--L*GTATLLTASYTL 408
Cdd:MTH00020 349 alSDEQDMRKM----GGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSI 424
|
....*.
gi 628971412 409 FMLLMT 414
Cdd:MTH00020 425 RLIYLT 430
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
277-323 |
9.65e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.81 E-value: 9.65e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 628971412 277 LRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTS 323
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-387 |
1.16e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 44.43 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 155 ISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLTnswSNLLLSLALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAAL 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 235 LLKLGGYGIMRFTTLTHPLSTNLYYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGL--------VIAASMIQTH 306
Cdd:PRK08042 222 VMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIillglgagVTGIALEQPA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 307 W---SFSGAMILMISHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMI 383
Cdd:PRK08042 302 LialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQ 381
|
....
gi 628971412 384 ALFN 387
Cdd:PRK08042 382 SFFK 385
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-371 |
2.53e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.48 E-value: 2.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 262 LTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRI 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 628971412 342 LLLTRGLQPLLPLMATWWLLANLTNMALPP 371
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
4.35e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 42.53 E-value: 4.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 137 GNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLTHPTLT--NSWSNLLLSLALLTAFMVKAPLYGLHL 214
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPaaDRALLEAGAALLLVVFLIKAAMWPLNF 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 215 WLPKAHVEA--PIAGSMllaALLLKLGGYGIMRFTTLTHPLSTNLYYPFLTLALW-GALMTSSI----CLRQTDLKSLIA 287
Cdd:PRK12666 232 WLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLpGGLATLAFgaigVLAAQRLRRLAA 308
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 628971412 288 YSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLFCLA 330
Cdd:PRK12666 309 YLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
107-327 |
1.15e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 41.42 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 107 ILAFSSTELTLFYisfeatliptlilitrwgNQPERLSAGI-YLLFYTLiSSLPLLVAILYLYMQIGTLHLMMLNLTHPT 185
Cdd:PRK12668 124 LMAFTSTFLVWAR------------------GTKAAVRAGFrYLLVHVL-GGVLLLAGILLHYAETGSFAFGAIAGLGGT 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 186 LTnsWsnlllslALLTAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAAlllklggygimrFTTLTHPLSTNLYYP-FLTL 264
Cdd:PRK12668 185 AA--W-------LILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSA------------FTTKTAVYALARAFPgTELL 243
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 628971412 265 ALWGALMT---SSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLF 327
Cdd:PRK12668 244 IYIGAAMAvygVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
160-429 |
2.08e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 40.39 E-value: 2.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 160 LLVAILYLYMQIGTL--HLMMLNLTHPTLTNSWSNLLLSLALLTAF---MVKAPLYGLHLWLPKAhVEAPIAGSMLLAAL 234
Cdd:PRK07376 189 LLLGILGLFWATGSFdfDGIADRLSELVSSGAVSGWLALLLCILVFlgpMAKSAQFPLHVWLPDA-MEGPTPISALIHAA 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 235 LLKLGG-YGIMRFttltHPLSTNLYYPFLTLALWGAL---MTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQthwSFS 310
Cdd:PRK07376 268 TMVAAGvFLVARM----YPVFEQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCG---AYS 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 311 GAMILMISHGLTSSMLFCLANT---------NYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTI 381
Cdd:PRK07376 341 AGLFHLMTHAYFKAMLFLGSGSvihgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEI 420
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 628971412 382 MIALFNWS-MLTIIL*GTATlLTASYTLFMLLMTQRGTLPNHITTIQNS 429
Cdd:PRK07376 421 LGAAFEANpALWFVGFLTAG-MTAFYMFRMYFLTFEGEFRGNDKELQKE 468
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
105-327 |
4.00e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 39.24 E-value: 4.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 105 SIILAFSSTELTLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAILYLYMQIGTLHLMMLNLThp 184
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLV-- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 628971412 185 tLTNSWSNLLLSLALLTAFMVKAPLYGL-----HLWLPKAHVEAPIAgSMLLAALLLKLGGYGIMrfttlthpLSTNLYY 259
Cdd:MTH00196 83 -LNSGQSFSSVSVPIGYLLIIVALLFKLsvapfHMWAPDVYEGAPTK-TTALLAIVPKLGIFSIL--------VSIGLNV 152
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 628971412 260 PFLTLALWGALMTSSI-CLRQTDLKSLIAYSSVSHMGLVIAASMIQTHWSFSGAMILMISHGLTSSMLF 327
Cdd:MTH00196 153 NILLIGGLFSLFVGAIgALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| |
