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Conserved domains on  [gi|62824472|gb|AAY15839|]
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NADH dehydrogenase subunit 3, partial (mitochondrion) [Myrmelastes schistaceus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-114 1.92e-52

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 160.47  E-value: 1.92e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    1 MILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQL 80
Cdd:MTH00136   3 LITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82

                         90       100       110
                 ....*....|....*....|....*....|....
gi 62824472   81 QSPLTTLTWLSIIILLLTLGLVYEWVQGGLEWAE 114
Cdd:MTH00136  83 PSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-114 1.92e-52

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 160.47  E-value: 1.92e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    1 MILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQL 80
Cdd:MTH00136   3 LITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82

                         90       100       110
                 ....*....|....*....|....*....|....
gi 62824472   81 QSPLTTLTWLSIIILLLTLGLVYEWVQGGLEWAE 114
Cdd:MTH00136  83 PSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-111 2.65e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 95.95  E-value: 2.65e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    19 LNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLlpLPWATQL-QSPLTTLTWLSIIILLL 97
Cdd:pfam00507   3 LSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAIL 80

                          90
                  ....*....|....
gi 62824472    98 TLGLVYEWVQGGLE 111
Cdd:pfam00507  81 LVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-112 4.48e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 88.64  E-value: 4.48e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472   2 ILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLlpLPWATQLQ 81
Cdd:COG0838   8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                        90       100       110
                ....*....|....*....|....*....|..
gi 62824472  82 S-PLTTLTWLSIIILLLTLGLVYEWVQGGLEW 112
Cdd:COG0838  86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-114 1.92e-52

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 160.47  E-value: 1.92e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    1 MILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQL 80
Cdd:MTH00136   3 LITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82

                         90       100       110
                 ....*....|....*....|....*....|....
gi 62824472   81 QSPLTTLTWLSIIILLLTLGLVYEWVQGGLEWAE 114
Cdd:MTH00136  83 PSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-114 3.34e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 157.08  E-value: 3.34e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    1 MILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQL 80
Cdd:MTH00069   1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 62824472   81 QSPLTTLTWLSIIILLLTLGLVYEWVQGGLEWAE 114
Cdd:MTH00069  81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 1.64e-50

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 155.42  E-value: 1.64e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    1 MILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQL 80
Cdd:MTH00113   2 NLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 62824472   81 QSPLTTLTWLSIIILLLTLGLVYEWVQGGLEWA 113
Cdd:MTH00113  82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 2-114 2.77e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 134.68  E-value: 2.77e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    2 ILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQLQ 81
Cdd:MTH00106   3 LMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTN 82

                         90       100       110
                 ....*....|....*....|....*....|...
gi 62824472   82 SPLTTLTWLSIIILLLTLGLVYEWVQGGLEWAE 114
Cdd:MTH00106  83 NLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-114 6.49e-36

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 118.55  E-value: 6.49e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    1 MILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQL 80
Cdd:MTH00042   3 NLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLI 82

                         90       100       110
                 ....*....|....*....|....*....|....
gi 62824472   81 QSPLTTLTWLSIIILLLTLGLVYEWVQGGLEWAE 114
Cdd:MTH00042  83 TNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 2-112 4.98e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 111.14  E-value: 4.98e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    2 ILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQLQ 81
Cdd:MTH00203   4 IMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLS 83

                         90       100       110
                 ....*....|....*....|....*....|.
gi 62824472   82 SPltTLTWLSIIILLLTLGLVYEWVQGGLEW 112
Cdd:MTH00203  84 SL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-112 5.77e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 98.31  E-value: 5.77e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    1 MILFMLTLSSLLSIILTMLNFWLAQTNPNS-EKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQ 79
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDrEKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 62824472   80 LQSPLTTLTWLSIIILLLTLGLVYEWVQGGLEW 112
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-111 2.65e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 95.95  E-value: 2.65e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    19 LNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLlpLPWATQL-QSPLTTLTWLSIIILLL 97
Cdd:pfam00507   3 LSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAIL 80

                          90
                  ....*....|....
gi 62824472    98 TLGLVYEWVQGGLE 111
Cdd:pfam00507  81 LVGLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-114 4.53e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 93.77  E-value: 4.53e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    1 MILFMLTLSSLLSIILTMLNFWLAQ-TNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQ 79
Cdd:MTH00148   3 SILLSLLFALILSPVLLLLGLVLSKrSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLG 82

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 62824472   80 LQSPLTTLTWLSIIILLLTLGLVYEWVQGGLEWAE 114
Cdd:MTH00148  83 SSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-114 2.56e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 89.28  E-value: 2.56e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    1 MILFMLTLSSLLSIILTMLNFWL-AQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQ 79
Cdd:MTH00202   3 LILFMSILSILISSLLFLVSWMLsFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLK 82

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 62824472   80 LQSPLTTLTWLSIIILLLTLGLVYEWVQGGLEWAE 114
Cdd:MTH00202  83 SSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 2-112 4.48e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 88.64  E-value: 4.48e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472   2 ILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLlpLPWATQLQ 81
Cdd:COG0838   8 ILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFR 85

                        90       100       110
                ....*....|....*....|....*....|..
gi 62824472  82 S-PLTTLTWLSIIILLLTLGLVYEWVQGGLEW 112
Cdd:COG0838  86 ElGWFGLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 2-112 1.10e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 87.46  E-value: 1.10e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    2 ILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLlpLPWATQL- 80
Cdd:MTH00055   8 IFILLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYn 85

                         90       100       110
                 ....*....|....*....|....*....|..
gi 62824472   81 QSPLTTLTWLSIIILLLTLGLVYEWVQGGLEW 112
Cdd:MTH00055  86 QIGLFGFWVMYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 2-112 2.16e-23

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 86.65  E-value: 2.16e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    2 ILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQLQ 81
Cdd:MTH00018   3 LFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQI 82

                         90       100       110
                 ....*....|....*....|....*....|.
gi 62824472   82 SPLtTLTWLSIIILLLTLGLVYEWVQGGLEW 112
Cdd:MTH00018  83 APF-GFWTMVGFLFILTLGLIYEWIKGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 2-113 2.39e-23

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 86.84  E-value: 2.39e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    2 ILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLlpLPWATQL- 80
Cdd:PRK06602  11 FLIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFr 88

                         90       100       110
                 ....*....|....*....|....*....|...
gi 62824472   81 QSPLTTLTWLSIIILLLTLGLVYEWVQGGLEWA 113
Cdd:PRK06602  89 EIGWLGFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 5-113 6.40e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 77.98  E-value: 6.40e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    5 MLTLSSLLSIILTMLNFWLA-----QTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLPWATQ 79
Cdd:MTH00012   3 LMMIPMMISLILPPLVLGAAwvlaaRSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILM 82

                         90       100       110
                 ....*....|....*....|....*....|....
gi 62824472   80 LQSPLTTLTWLSIIILLLTLGLVYEWVQGGLEWA 113
Cdd:MTH00012  83 TSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 11-112 1.31e-17

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 72.27  E-value: 1.31e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472   11 LLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLlpLPWATQL-QSPLTTLTW 89
Cdd:MTH00030  22 LVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFnQLNLFSFWI 99

                         90       100
                 ....*....|....*....|...
gi 62824472   90 LSIIILLLTLGLVYEWVQGGLEW 112
Cdd:MTH00030 100 VYTFLIVLAIGLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 2-112 2.07e-12

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 58.91  E-value: 2.07e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    2 ILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLP--FSIRFFLIAILFLLFDLEIALLLPlpWATQ 79
Cdd:PRK07928   7 ILVLGALAAAFAVVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVS 84

                         90       100       110
                 ....*....|....*....|....*....|....
gi 62824472   80 LQS-PLTTLTWLSIIILLLTLGLVYEWVQGGLEW 112
Cdd:PRK07928  85 FDAlGVFGLVEMALFMLTVFVAYAYVWRRGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 3-112 1.47e-11

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 56.53  E-value: 1.47e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    3 LFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLlpLPWATQLQS 82
Cdd:CHL00022  11 WAFLIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDV 88

                         90       100       110
                 ....*....|....*....|....*....|.
gi 62824472   83 -PLTTLTWLSIIILLLTLGLVYEWVQGGLEW 112
Cdd:CHL00022  89 lGVSAFIEALIFVLILIVGLVYAWRKGALEW 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-72 3.87e-09

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 50.28  E-value: 3.87e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 62824472    1 MILFMLTLSSLLSI-ILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLL 72
Cdd:MTH00092   2 LVLIFVFLFTLLLLmLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
1-112 2.26e-08

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 48.20  E-value: 2.26e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    1 MILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPlpWATQL 80
Cdd:PRK07756  11 IVLIFLLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAY 88

                         90       100       110
                 ....*....|....*....|....*....|...
gi 62824472   81 -QSPLTTLTWLSIIILLLTLGLVYEWVQGGLEW 112
Cdd:PRK07756  89 dKLGLFALIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
1-112 1.55e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 43.50  E-value: 1.55e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824472    1 MILFMLTLSSLLSIILTMLNFWLAQTNPNSEKLSPYECGFDPLGSARlPFSIRFFLIAILFLLFDLEIALLlpLPWATQL 80
Cdd:PRK08489  16 LLVLTFVAFFLTTRLARFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWAVDF 92

                         90       100       110
                 ....*....|....*....|....*....|...
gi 62824472   81 QS-PLTTLTWLSIIILLLTLGLVYEWVQGGLEW 112
Cdd:PRK08489  93 KLlGLFGLIEMLLFIVLLTIGFIYAWKKGALEW 125
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-75 1.69e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.95  E-value: 1.69e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 62824472   34 SPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPLP 75
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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