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Conserved domains on  [gi|62824432|gb|AAY15819|]
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NADH dehydrogenase subunit 3, partial (mitochondrion) [Percnostola leucostigma leucostigma]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 18-114 2.52e-51

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 157.77  E-value: 2.52e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   18 MLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPLTTLTWSSTIILLL 97
Cdd:MTH00136  20 IVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILL 99

                         90
                 ....*....|....*..
gi 62824432   98 TLGLVYEWIQGGLEWAE 114
Cdd:MTH00136 100 TLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 18-114 2.52e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 157.77  E-value: 2.52e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   18 MLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPLTTLTWSSTIILLL 97
Cdd:MTH00136  20 IVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILL 99

                         90
                 ....*....|....*..
gi 62824432   98 TLGLVYEWIQGGLEWAE 114
Cdd:MTH00136 100 TLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-111 2.22e-28

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 98.65  E-value: 2.22e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432    19 LNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QFPLTTLTWSSTIILLL 97
Cdd:pfam00507   3 LSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAIL 80

                          90
                  ....*....|....
gi 62824432    98 TLGLVYEWIQGGLE 111
Cdd:pfam00507  81 LVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 19-112 8.38e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.17  E-value: 8.38e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432  19 LNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QFPLTTLTWSSTIILLL 97
Cdd:COG0838  25 LSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFrELGWFGLIEMLVFIAIL 102

                        90
                ....*....|....*
gi 62824432  98 TLGLVYEWIQGGLEW 112
Cdd:COG0838 103 LVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 18-114 2.52e-51

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 157.77  E-value: 2.52e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   18 MLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPLTTLTWSSTIILLL 97
Cdd:MTH00136  20 IVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLLTFFWATAVLILL 99

                         90
                 ....*....|....*..
gi 62824432   98 TLGLVYEWIQGGLEWAE 114
Cdd:MTH00136 100 TLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 18-114 1.42e-50

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 155.54  E-value: 1.42e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   18 MLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPLTTLTWSSTIILLL 97
Cdd:MTH00069  18 TISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTPTNTLFWSTLILILL 97

                         90
                 ....*....|....*..
gi 62824432   98 TLGLVYEWIQGGLEWAE 114
Cdd:MTH00069  98 TLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 18-113 9.07e-50

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 153.50  E-value: 9.07e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   18 MLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPLTTLTWSSTIILLL 97
Cdd:MTH00113  19 TLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTTLTWATIILTLL 98

                         90
                 ....*....|....*.
gi 62824432   98 TLGLVYEWIQGGLEWA 113
Cdd:MTH00113  99 TLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 18-114 2.10e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 132.37  E-value: 2.10e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   18 MLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPLTTLTWSSTIILLL 97
Cdd:MTH00106  19 LIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLL 98

                         90
                 ....*....|....*..
gi 62824432   98 TLGLVYEWIQGGLEWAE 114
Cdd:MTH00106  99 ALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 27-114 7.27e-35

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 115.85  E-value: 7.27e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   27 NPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPLTTLTWSSTIILLLTLGLVYEWI 106
Cdd:MTH00042  29 SPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWV 108


                 ....*...
gi 62824432  107 QGGLEWAE 114
Cdd:MTH00042 109 NGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 18-112 6.62e-33

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 110.76  E-value: 6.62e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   18 MLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPltTLTWSSTIILLL 97
Cdd:MTH00203  20 FIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQLSSL--SLLLAFLFLILL 97

                         90
                 ....*....|....*
gi 62824432   98 TLGLVYEWIQGGLEW 112
Cdd:MTH00203  98 TLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-111 2.22e-28

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 98.65  E-value: 2.22e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432    19 LNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QFPLTTLTWSSTIILLL 97
Cdd:pfam00507   3 LSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFrELGWFGFVEMLIFIAIL 80

                          90
                  ....*....|....
gi 62824432    98 TLGLVYEWIQGGLE 111
Cdd:pfam00507  81 LVGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 29-112 2.59e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 91.38  E-value: 2.59e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   29 NSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPLTTLTWSSTIILLLTLGLVYEWIQG 108
Cdd:MTH00161  30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109


                 ....
gi 62824432  109 GLEW 112
Cdd:MTH00161 110 ALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 18-114 4.62e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 91.07  E-value: 4.62e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   18 MLNFWLAQ-TNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPLTTLTWSSTIILL 96
Cdd:MTH00148  20 LLGLVLSKrSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLFIFLLI 99

                         90
                 ....*....|....*...
gi 62824432   97 LTLGLVYEWIQGGLEWAE 114
Cdd:MTH00148 100 LILGLFHEWNEGSLDWVS 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 19-112 8.38e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.17  E-value: 8.38e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432  19 LNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QFPLTTLTWSSTIILLL 97
Cdd:COG0838  25 LSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFrELGWFGLIEMLVFIAIL 102

                        90
                ....*....|....*
gi 62824432  98 TLGLVYEWIQGGLEW 112
Cdd:COG0838 103 LVGLIYAWKKGALEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 24-114 1.41e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 84.66  E-value: 1.41e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   24 AQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPLTTLTWSSTIILLLTLGLVY 103
Cdd:MTH00202  27 FRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIH 106

                         90
                 ....*....|.
gi 62824432  104 EWIQGGLEWAE 114
Cdd:MTH00202 107 EWKEGSLDWVK 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 28-112 6.53e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 80.52  E-value: 6.53e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   28 PNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQFPLTTLTWSSTIILLLTLG-LVYEWI 106
Cdd:MTH00055  34 PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFGFWVMYLFLIILTIgLIYEWV 111


                 ....*.
gi 62824432  107 QGGLEW 112
Cdd:MTH00055 112 KGGLEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 24-113 9.67e-21

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 80.29  E-value: 9.67e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   24 AQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPLTTLTWSSTIILLLTLGLVY 103
Cdd:MTH00012  27 ARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIH 106

                         90
                 ....*....|
gi 62824432  104 EWIQGGLEWA 113
Cdd:MTH00012 107 EWREGSLDWS 116
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 19-113 2.32e-20

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 79.14  E-value: 2.32e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   19 LNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQLQFPLTTLTWSSTIILLLT 98
Cdd:PRK06602  28 AGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFREIGWLGFVEAMIFILVL 105

                         90
                 ....*....|....*.
gi 62824432   99 LG-LVYEWIQGGLEWA 113
Cdd:PRK06602 106 LVgLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 18-112 4.10e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 75.87  E-value: 4.10e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   18 MLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWATQLQFPLTTLTwSSTIILLL 97
Cdd:MTH00018  19 GASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGFWT-MVGFLFIL 97

                         90
                 ....*....|....*
gi 62824432   98 TLGLVYEWIQGGLEW 112
Cdd:MTH00018  98 TLGLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 20-112 1.28e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 69.96  E-value: 1.28e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   20 NFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QFPLTTLTWSSTIILLLT 98
Cdd:MTH00030  31 NSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFnQLNLFSFWIVYTFLIVLA 108

                         90
                 ....*....|....
gi 62824432   99 LGLVYEWIQGGLEW 112
Cdd:MTH00030 109 IGLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 28-112 1.05e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 54.29  E-value: 1.05e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   28 PNSEKLSPYECGFDPLGSARLP--FSIRFFLVAILFLLFDLEIALLLPlpWATQLQ-FPLTTLTWSSTIILLLTLGLVYE 104
Cdd:PRK07928  33 YNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDaLGVFGLVEMALFMLTVFVAYAYV 110


                 ....*...
gi 62824432  105 WIQGGLEW 112
Cdd:PRK07928 111 WRRGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 22-112 5.99e-10

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 52.30  E-value: 5.99e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   22 WLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLlpLPWATQL-QFPLTTLTWSSTIILLLTLG 100
Cdd:CHL00022  30 LLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFdVLGVSAFIEALIFVLILIVG 107

                         90
                 ....*....|..
gi 62824432  101 LVYEWIQGGLEW 112
Cdd:CHL00022 108 LVYAWRKGALEW 119
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 18-72 4.73e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 47.20  E-value: 4.73e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 62824432   18 MLNFWLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLL 72
Cdd:MTH00092  20 LLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
22-112 3.07e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 45.50  E-value: 3.07e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62824432   22 WLAQTNPNSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPlpWATQL-QFPLTTLTWSSTIILLLTLG 100
Cdd:PRK07756  32 MLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAVAYdKLGLFALIEMLIFVVMLLVG 109

                         90
                 ....*....|..
gi 62824432  101 LVYEWIQGGLEW 112
Cdd:PRK07756 110 LAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
23-77 3.61e-06

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 42.73  E-value: 3.61e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 62824432   23 LAQTNPNSEKLSPYECGFDPLGSARlPFSIRFFLVAILFLLFDLEIALLlpLPWA 77
Cdd:PRK08489  38 LAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFM--FPWA 89
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 34-75 1.11e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 38.34  E-value: 1.11e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 62824432   34 SPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLP 75
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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