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Conserved domains on  [gi|62822337|gb|AAY14886|]
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unknown, partial [Homo sapiens]

Protein Classification

VHP domain-containing protein( domain architecture ID 10491127)

VHP domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
VHP pfam02209
Villin headpiece domain;
2-37 4.61e-14

Villin headpiece domain;


:

Pssm-ID: 460493  Cd Length: 36  Bit Score: 57.77  E-value: 4.61e-14
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 62822337    2 HLSIEDFTQAFGMTPAAFSALPRWKQQNLKKEKGLF 37
Cdd:pfam02209  1 YLSDEDFEEVFGMSREEFYKLPKWKQNNLKKKAGLF 36
 
Name Accession Description Interval E-value
VHP pfam02209
Villin headpiece domain;
2-37 4.61e-14

Villin headpiece domain;


Pssm-ID: 460493  Cd Length: 36  Bit Score: 57.77  E-value: 4.61e-14
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 62822337    2 HLSIEDFTQAFGMTPAAFSALPRWKQQNLKKEKGLF 37
Cdd:pfam02209  1 YLSDEDFEEVFGMSREEFYKLPKWKQNNLKKKAGLF 36
VHP smart00153
Villin headpiece domain;
2-37 4.71e-11

Villin headpiece domain;


Pssm-ID: 128458  Cd Length: 36  Bit Score: 50.01  E-value: 4.71e-11
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 62822337     2 HLSIEDFTQAFGMTPAAFSALPRWKQQNLKKEKGLF 37
Cdd:smart00153  1 YLSDEDFEEVFGMTREEFYKLPLWKQNQLKKKKGLF 36
 
Name Accession Description Interval E-value
VHP pfam02209
Villin headpiece domain;
2-37 4.61e-14

Villin headpiece domain;


Pssm-ID: 460493  Cd Length: 36  Bit Score: 57.77  E-value: 4.61e-14
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 62822337    2 HLSIEDFTQAFGMTPAAFSALPRWKQQNLKKEKGLF 37
Cdd:pfam02209  1 YLSDEDFEEVFGMSREEFYKLPKWKQNNLKKKAGLF 36
VHP smart00153
Villin headpiece domain;
2-37 4.71e-11

Villin headpiece domain;


Pssm-ID: 128458  Cd Length: 36  Bit Score: 50.01  E-value: 4.71e-11
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 62822337     2 HLSIEDFTQAFGMTPAAFSALPRWKQQNLKKEKGLF 37
Cdd:smart00153  1 YLSDEDFEEVFGMTREEFYKLPLWKQNQLKKKKGLF 36
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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