View
Concise Results
Standard Results
Full Results
glycine betaine transport integral membrane protein BetP, partial [Mycobacterium tuberculosis 2233BH]
Protein Classification
BCCT family transporter ( domain architecture ID 10003438 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport; similar to Bacillus subtilis glycine betaine transporter OpuD
List of domain hits
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
17-491
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 548.59
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 17 RS I Q P A VFIP ASVV I V A MIVVSVVYSSV A ENAFVRLN S A IT GGV GW W Y I L VATG FVVF A LY CGI S RI G T IRLG R DD EL PE 96
Cdd:COG1292 11 KK I D P P VFIP SALL I L A FVLWGLLFPEA A GAVLNAAF S W IT TNF GW F Y L L LVLL FVVF C LY LAF S KY G K IRLG G DD AK PE 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 97 FS FWA W L AMLFSAGMGIGLVF Y GVAEPL S H Y L R PP R sr GV PALTDA AA NQ AMA L T V FHWGLHAWAIY VV VGL GM AY MT YR 176
Cdd:COG1292 91 FS TFS W F AMLFSAGMGIGLVF W GVAEPL Y H F L S PP P -- GV EPGSPE AA RW AMA Y T F FHWGLHAWAIY AL VGL AL AY FA YR 168
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 177 RG R PL SVRWL L E P VV G R g R VE G AL G HAV D VI A IVG T L FGVATSLG F G IT QI AS GL E YL GW I RVDNWWMVGM IA A ITA TA T 256
Cdd:COG1292 169 RG L PL TISSA L Y P LL G D - R IY G PI G KVI D IL A VFA T V FGVATSLG L G AL QI NA GL N YL FG I PNSLTVQIII IA V ITA LF T 247
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 257 A S V VSG VS KG L K W LSN I NM A LA AA L A LFVL LL GPTLF L L QSW VQ N LG G Y V Q SLPQFM L R T APFSHD GWLG D WT I FYW G WW 336
Cdd:COG1292 248 I S A VSG LD KG I K R LSN L NM V LA LL L L LFVL IV GPTLF I L NLF VQ S LG D Y L Q NFVPMS L W T DAYGDT GWLG G WT V FYW A WW 327
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 337 I S WAPFVG M FIARISRGRTIREF IGA VLLVPT VIAS LWF TI FG DS A LLRQR N N G DM L VN - G A VDTNTS LF R LL DG LP I G A 415
Cdd:COG1292 328 I A WAPFVG L FIARISRGRTIREF VLG VLLVPT LFTF LWF SV FG GT A IHLEL N G G GD L AE a V A AGVEAA LF A LL EQ LP L G T 407
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 624388183 416 I T SVLA VLVIVF FFVTS S DSGSLV IDI L SA GG ELD PP KLT R VY W A VL E G VA AAVLLL I GG ags L T AL R TA A I A TAL 491
Cdd:COG1292 408 I L SVLA IILVII FFVTS A DSGSLV LAM L TS GG DEE PP RWQ R IF W G VL I G LV AAVLLL A GG --- L S AL Q TA S I I TAL 480
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
17-491
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 548.59
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 17 RS I Q P A VFIP ASVV I V A MIVVSVVYSSV A ENAFVRLN S A IT GGV GW W Y I L VATG FVVF A LY CGI S RI G T IRLG R DD EL PE 96
Cdd:COG1292 11 KK I D P P VFIP SALL I L A FVLWGLLFPEA A GAVLNAAF S W IT TNF GW F Y L L LVLL FVVF C LY LAF S KY G K IRLG G DD AK PE 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 97 FS FWA W L AMLFSAGMGIGLVF Y GVAEPL S H Y L R PP R sr GV PALTDA AA NQ AMA L T V FHWGLHAWAIY VV VGL GM AY MT YR 176
Cdd:COG1292 91 FS TFS W F AMLFSAGMGIGLVF W GVAEPL Y H F L S PP P -- GV EPGSPE AA RW AMA Y T F FHWGLHAWAIY AL VGL AL AY FA YR 168
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 177 RG R PL SVRWL L E P VV G R g R VE G AL G HAV D VI A IVG T L FGVATSLG F G IT QI AS GL E YL GW I RVDNWWMVGM IA A ITA TA T 256
Cdd:COG1292 169 RG L PL TISSA L Y P LL G D - R IY G PI G KVI D IL A VFA T V FGVATSLG L G AL QI NA GL N YL FG I PNSLTVQIII IA V ITA LF T 247
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 257 A S V VSG VS KG L K W LSN I NM A LA AA L A LFVL LL GPTLF L L QSW VQ N LG G Y V Q SLPQFM L R T APFSHD GWLG D WT I FYW G WW 336
Cdd:COG1292 248 I S A VSG LD KG I K R LSN L NM V LA LL L L LFVL IV GPTLF I L NLF VQ S LG D Y L Q NFVPMS L W T DAYGDT GWLG G WT V FYW A WW 327
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 337 I S WAPFVG M FIARISRGRTIREF IGA VLLVPT VIAS LWF TI FG DS A LLRQR N N G DM L VN - G A VDTNTS LF R LL DG LP I G A 415
Cdd:COG1292 328 I A WAPFVG L FIARISRGRTIREF VLG VLLVPT LFTF LWF SV FG GT A IHLEL N G G GD L AE a V A AGVEAA LF A LL EQ LP L G T 407
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 624388183 416 I T SVLA VLVIVF FFVTS S DSGSLV IDI L SA GG ELD PP KLT R VY W A VL E G VA AAVLLL I GG ags L T AL R TA A I A TAL 491
Cdd:COG1292 408 I L SVLA IILVII FFVTS A DSGSLV LAM L TS GG DEE PP RWQ R IF W G VL I G LV AAVLLL A GG --- L S AL Q TA S I I TAL 480
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
23-491
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 515.55
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 23 VF IPASVV I V A MIVVSVVYSSVAENAFVRLNSA IT GGV GW W Y I L VATG F V VFAL YCGI SR I G T IRLG R DD EL PEFS FWA W 102
Cdd:pfam02028 1 VF AVSAGL I L A FVLLGLIFPEALSAVVNTALDW IT DNF GW F Y L L LVLI F L VFAL FLAF SR Y G N IRLG G DD DK PEFS TFS W 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 103 L AMLF S AGMGIGLVF Y GVAEPLSHYL R PP R sr G VPAL T DA AA N QAMA L T V FHWGLHAWAIY VV V G L GM AY MT YR R G R PL S 182
Cdd:pfam02028 81 F AMLF A AGMGIGLVF W GVAEPLSHYL S PP P -- G GEPG T PE AA Q QAMA Y T F FHWGLHAWAIY AL V A L AL AY FA YR K G L PL L 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 183 VRWL L E P VV G R g R VE G AL G H A V D VI AI VG T L FGVATSLG F G IT QI AS GL E YL GW I RVDNWWMVGM IA A ITA TA T A S V VSG 262
Cdd:pfam02028 159 ISSA L Y P LL G D - R ID G PI G K A I D IL AI IA T V FGVATSLG L G AL QI NA GL S YL FG I PNTLTTQLAI IA I ITA LF T I S A VSG 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 263 VS KG L K W LSN I NM A LA A AL A LFVL LL GPTLF L L QSW VQ N LG G Y V Q SLPQFMLR T A PF SHD G - WLG D WTIFYW G WWI S WAP 341
Cdd:pfam02028 238 LD KG I K R LSN L NM Y LA V AL L LFVL IA GPTLF I L NTF VQ S LG D Y L Q NFVPMSFY T D PF GDT G g WLG G WTIFYW A WWI A WAP 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 342 FVGMFIARISRGRTIREFI GA VLLVPT VIAS LWF TI FG DS A LLRQR N NGDM L VN - GAVDTNTS LF R LL DG LP I G A I T SVL 420
Cdd:pfam02028 318 FVGMFIARISRGRTIREFI LG VLLVPT LFTF LWF SV FG GT A IYLEL N GPGD L AD a VEAGPPAA LF A LL EQ LP L G T I L SVL 397
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 624388183 421 A V L V I VF FFVTS S DSG S LVI DI LS A GG E L D PP KLT RV Y W A VL E G VA AAVLLL I GG ags L T AL RT A A I AT AL 491
Cdd:pfam02028 398 A L L L I II FFVTS A DSG T LVI AM LS S GG D L N PP RWQ RV F W G VL L G AV AAVLLL A GG --- L E AL QS A S I IA AL 465
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
61-491
2.75e-177
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 505.35
E-value: 2.75e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 61 GW W YIL VA T G F VV F A LY CGI SR I G T IRLGRDDE L PEFS FWA WLAMLF S AGMG I GL V F Y GVAEPL SH YL R PP RSR G VPAL T 140
Cdd:TIGR00842 1 GW A YIL TV T L F LG F V LY IAF SR Y G K IRLGRDDE K PEFS TLS WLAMLF A AGMG A GL M F W GVAEPL TY YL T PP FGA G PTST T 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 141 da A AN QA M A L T V FHWG L H A WAIY VV VGL GM AY MTY R R G R PL SVRWL L E P VV G R g R V E G AL G H A V D VI A I V G T L FGVATSL 220
Cdd:TIGR00842 81 -- A QE QA L A Y T L FHWG I H P WAIY AL VGL AL AY FHF R K G L PL RLSSA L V P LL G E - K V N G PI G K A I D IL A L V A T V FGVATSL 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 221 G F G IT QI AS GL EY L GW I RVDN W WMVGM I AAI TA T A TA SV V SGV S KG L K W LSNINMALA AA L A LFVL LL GPT L FLL Q S W V Q 300
Cdd:TIGR00842 158 G L G AP QI NA GL SA L FG I PDSF W LQALI I LCV TA L A CI SV A SGV G KG I K I LSNINMALA FL L L LFVL IV GPT V FLL N S F V D 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 301 NL G G Y V Q SL PQ FML RT A P F - SHD GW L G D WT I FYW G WWISW A PFVGMFIARISRGRTIREFI GA VLL V PT VIAS LWF TI FG 379
Cdd:TIGR00842 238 SI G N Y L Q NF PQ MSF RT D P D d GKG GW P G G WT V FYW A WWISW S PFVGMFIARISRGRTIREFI FG VLL G PT AFTW LWF SV FG 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 380 D SALL R Q R N N G DMLVNGA V D TN -- TS LF R LL DG LP I G A IT SV LA VLV I VF FF V TS S DS G SLV ID - IL S A GG E L -- D PPK L 454
Cdd:TIGR00842 318 N SALL L Q Q N G G FINGPFV V E TN ga RA LF G LL AA LP L G T IT MA LA LIL I II FF I TS A DS A SLV LA n TT S R GG Q L ge E PPK W 397
410 420 430
....*....|....*....|....*....|....*..
gi 624388183 455 T RV Y WAV LE G VA A A VLL LI G ga GSL T AL R T AA I AT AL 491
Cdd:TIGR00842 398 V RV F WAV AI G LI A L VLL FS G -- GSL A AL Q T TT I IA AL 432
PRK09928
PRK09928 choline transport protein BetT; Provisional
19-491
4.85e-113
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 348.61
E-value: 4.85e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 19 I Q P A VF IPASVV I VAMIVVSVVYSSVAENAFV R LNSAITGGV GW W Y I L V AT GFV VF ALYCGI SR I G T I R LG RDDEL PEFS 98
Cdd:PRK09928 15 I N P V VF YTSAGL I LLFSLTTILFTDFSNRWIN R TLNWVSKTF GW Y Y L L A AT LYI VF VIFIAC SR F G S I K LG PEQSK PEFS 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 99 FWA W L AMLF S AG M GI G L V F YG VAEP LSH Y LR PP RSR G V pal T DA AA N QAM AL T V FH W GL HA W AI Y VVV G LGMA Y MT YR RG 178
Cdd:PRK09928 95 LLS W A AMLF A AG I GI D L M F FS VAEP VTQ Y MQ PP EGA G Q --- T IE AA R QAM VW T L FH Y GL TG W SM Y ALM G MALG Y FS YR YN 171
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 179 R PL SV R WL L E P VV G R g R VE G AL GH A VD VI A IV GT L FG V AT S LG F G IT Q IAS GL EY L GW I RVDNWWMVGM IA AITAT AT A S 258
Cdd:PRK09928 172 L PL TI R SA L Y P IF G K - R IN G PI GH S VD IA A VI GT I FG I AT T LG I G VV Q LNY GL SV L FD I PESLAAQAAL IA LSVII AT I S 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 259 V V SGV S KG LKW LS NI N MA LA AA L A LFVL LL G P T L FLL QSW V Q N L G G YV QSLPQFM L RTAP F SH - DG W LGD WT I F Y W G WW I 337
Cdd:PRK09928 251 V T SGV N KG IRV LS EL N VL LA LG L I LFVL FM G D T S FLL NAL V L N V G D YV NRFMGMT L NSFA F DR p TE W MNN WT L F F W A WW V 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 338 S W A PFVG M F I ARISRGRTIR E F IGAV L LV P TVIAS LW FT IFG D SAL lrqrnng DMLVN G AVD -------- TNTSLFR LL D 409
Cdd:PRK09928 331 A W S PFVG L F L ARISRGRTIR Q F VLGT L II P FTFTL LW LS IFG N SAL ------- YEIIH G NAA faeeamah PERGFYS LL A 403
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 410 GL P IGAITSVL A VLVIVF F F VTS S DSG S LV I -------- DI L S aggel D P P KLT RV Y W A V LE G VAAAVL L LIG G ags LT A 481
Cdd:PRK09928 404 QY P AFTFSASV A TITGLL F Y VTS A DSG A LV L gnftsklk DI N S ----- D A P NWL RV F W S V AI G LLTLGM L MTN G --- IS A 475
490
....*....|
gi 624388183 482 L RTAAIATA L 491
Cdd:PRK09928 476 L QNTTVIMG L 485
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
17-491
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 548.59
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 17 RS I Q P A VFIP ASVV I V A MIVVSVVYSSV A ENAFVRLN S A IT GGV GW W Y I L VATG FVVF A LY CGI S RI G T IRLG R DD EL PE 96
Cdd:COG1292 11 KK I D P P VFIP SALL I L A FVLWGLLFPEA A GAVLNAAF S W IT TNF GW F Y L L LVLL FVVF C LY LAF S KY G K IRLG G DD AK PE 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 97 FS FWA W L AMLFSAGMGIGLVF Y GVAEPL S H Y L R PP R sr GV PALTDA AA NQ AMA L T V FHWGLHAWAIY VV VGL GM AY MT YR 176
Cdd:COG1292 91 FS TFS W F AMLFSAGMGIGLVF W GVAEPL Y H F L S PP P -- GV EPGSPE AA RW AMA Y T F FHWGLHAWAIY AL VGL AL AY FA YR 168
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 177 RG R PL SVRWL L E P VV G R g R VE G AL G HAV D VI A IVG T L FGVATSLG F G IT QI AS GL E YL GW I RVDNWWMVGM IA A ITA TA T 256
Cdd:COG1292 169 RG L PL TISSA L Y P LL G D - R IY G PI G KVI D IL A VFA T V FGVATSLG L G AL QI NA GL N YL FG I PNSLTVQIII IA V ITA LF T 247
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 257 A S V VSG VS KG L K W LSN I NM A LA AA L A LFVL LL GPTLF L L QSW VQ N LG G Y V Q SLPQFM L R T APFSHD GWLG D WT I FYW G WW 336
Cdd:COG1292 248 I S A VSG LD KG I K R LSN L NM V LA LL L L LFVL IV GPTLF I L NLF VQ S LG D Y L Q NFVPMS L W T DAYGDT GWLG G WT V FYW A WW 327
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 337 I S WAPFVG M FIARISRGRTIREF IGA VLLVPT VIAS LWF TI FG DS A LLRQR N N G DM L VN - G A VDTNTS LF R LL DG LP I G A 415
Cdd:COG1292 328 I A WAPFVG L FIARISRGRTIREF VLG VLLVPT LFTF LWF SV FG GT A IHLEL N G G GD L AE a V A AGVEAA LF A LL EQ LP L G T 407
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 624388183 416 I T SVLA VLVIVF FFVTS S DSGSLV IDI L SA GG ELD PP KLT R VY W A VL E G VA AAVLLL I GG ags L T AL R TA A I A TAL 491
Cdd:COG1292 408 I L SVLA IILVII FFVTS A DSGSLV LAM L TS GG DEE PP RWQ R IF W G VL I G LV AAVLLL A GG --- L S AL Q TA S I I TAL 480
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
23-491
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 515.55
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 23 VF IPASVV I V A MIVVSVVYSSVAENAFVRLNSA IT GGV GW W Y I L VATG F V VFAL YCGI SR I G T IRLG R DD EL PEFS FWA W 102
Cdd:pfam02028 1 VF AVSAGL I L A FVLLGLIFPEALSAVVNTALDW IT DNF GW F Y L L LVLI F L VFAL FLAF SR Y G N IRLG G DD DK PEFS TFS W 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 103 L AMLF S AGMGIGLVF Y GVAEPLSHYL R PP R sr G VPAL T DA AA N QAMA L T V FHWGLHAWAIY VV V G L GM AY MT YR R G R PL S 182
Cdd:pfam02028 81 F AMLF A AGMGIGLVF W GVAEPLSHYL S PP P -- G GEPG T PE AA Q QAMA Y T F FHWGLHAWAIY AL V A L AL AY FA YR K G L PL L 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 183 VRWL L E P VV G R g R VE G AL G H A V D VI AI VG T L FGVATSLG F G IT QI AS GL E YL GW I RVDNWWMVGM IA A ITA TA T A S V VSG 262
Cdd:pfam02028 159 ISSA L Y P LL G D - R ID G PI G K A I D IL AI IA T V FGVATSLG L G AL QI NA GL S YL FG I PNTLTTQLAI IA I ITA LF T I S A VSG 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 263 VS KG L K W LSN I NM A LA A AL A LFVL LL GPTLF L L QSW VQ N LG G Y V Q SLPQFMLR T A PF SHD G - WLG D WTIFYW G WWI S WAP 341
Cdd:pfam02028 238 LD KG I K R LSN L NM Y LA V AL L LFVL IA GPTLF I L NTF VQ S LG D Y L Q NFVPMSFY T D PF GDT G g WLG G WTIFYW A WWI A WAP 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 342 FVGMFIARISRGRTIREFI GA VLLVPT VIAS LWF TI FG DS A LLRQR N NGDM L VN - GAVDTNTS LF R LL DG LP I G A I T SVL 420
Cdd:pfam02028 318 FVGMFIARISRGRTIREFI LG VLLVPT LFTF LWF SV FG GT A IYLEL N GPGD L AD a VEAGPPAA LF A LL EQ LP L G T I L SVL 397
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 624388183 421 A V L V I VF FFVTS S DSG S LVI DI LS A GG E L D PP KLT RV Y W A VL E G VA AAVLLL I GG ags L T AL RT A A I AT AL 491
Cdd:pfam02028 398 A L L L I II FFVTS A DSG T LVI AM LS S GG D L N PP RWQ RV F W G VL L G AV AAVLLL A GG --- L E AL QS A S I IA AL 465
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
61-491
2.75e-177
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 505.35
E-value: 2.75e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 61 GW W YIL VA T G F VV F A LY CGI SR I G T IRLGRDDE L PEFS FWA WLAMLF S AGMG I GL V F Y GVAEPL SH YL R PP RSR G VPAL T 140
Cdd:TIGR00842 1 GW A YIL TV T L F LG F V LY IAF SR Y G K IRLGRDDE K PEFS TLS WLAMLF A AGMG A GL M F W GVAEPL TY YL T PP FGA G PTST T 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 141 da A AN QA M A L T V FHWG L H A WAIY VV VGL GM AY MTY R R G R PL SVRWL L E P VV G R g R V E G AL G H A V D VI A I V G T L FGVATSL 220
Cdd:TIGR00842 81 -- A QE QA L A Y T L FHWG I H P WAIY AL VGL AL AY FHF R K G L PL RLSSA L V P LL G E - K V N G PI G K A I D IL A L V A T V FGVATSL 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 221 G F G IT QI AS GL EY L GW I RVDN W WMVGM I AAI TA T A TA SV V SGV S KG L K W LSNINMALA AA L A LFVL LL GPT L FLL Q S W V Q 300
Cdd:TIGR00842 158 G L G AP QI NA GL SA L FG I PDSF W LQALI I LCV TA L A CI SV A SGV G KG I K I LSNINMALA FL L L LFVL IV GPT V FLL N S F V D 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 301 NL G G Y V Q SL PQ FML RT A P F - SHD GW L G D WT I FYW G WWISW A PFVGMFIARISRGRTIREFI GA VLL V PT VIAS LWF TI FG 379
Cdd:TIGR00842 238 SI G N Y L Q NF PQ MSF RT D P D d GKG GW P G G WT V FYW A WWISW S PFVGMFIARISRGRTIREFI FG VLL G PT AFTW LWF SV FG 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 380 D SALL R Q R N N G DMLVNGA V D TN -- TS LF R LL DG LP I G A IT SV LA VLV I VF FF V TS S DS G SLV ID - IL S A GG E L -- D PPK L 454
Cdd:TIGR00842 318 N SALL L Q Q N G G FINGPFV V E TN ga RA LF G LL AA LP L G T IT MA LA LIL I II FF I TS A DS A SLV LA n TT S R GG Q L ge E PPK W 397
410 420 430
....*....|....*....|....*....|....*..
gi 624388183 455 T RV Y WAV LE G VA A A VLL LI G ga GSL T AL R T AA I AT AL 491
Cdd:TIGR00842 398 V RV F WAV AI G LI A L VLL FS G -- GSL A AL Q T TT I IA AL 432
PRK09928
PRK09928 choline transport protein BetT; Provisional
19-491
4.85e-113
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 348.61
E-value: 4.85e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 19 I Q P A VF IPASVV I VAMIVVSVVYSSVAENAFV R LNSAITGGV GW W Y I L V AT GFV VF ALYCGI SR I G T I R LG RDDEL PEFS 98
Cdd:PRK09928 15 I N P V VF YTSAGL I LLFSLTTILFTDFSNRWIN R TLNWVSKTF GW Y Y L L A AT LYI VF VIFIAC SR F G S I K LG PEQSK PEFS 94
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 99 FWA W L AMLF S AG M GI G L V F YG VAEP LSH Y LR PP RSR G V pal T DA AA N QAM AL T V FH W GL HA W AI Y VVV G LGMA Y MT YR RG 178
Cdd:PRK09928 95 LLS W A AMLF A AG I GI D L M F FS VAEP VTQ Y MQ PP EGA G Q --- T IE AA R QAM VW T L FH Y GL TG W SM Y ALM G MALG Y FS YR YN 171
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 179 R PL SV R WL L E P VV G R g R VE G AL GH A VD VI A IV GT L FG V AT S LG F G IT Q IAS GL EY L GW I RVDNWWMVGM IA AITAT AT A S 258
Cdd:PRK09928 172 L PL TI R SA L Y P IF G K - R IN G PI GH S VD IA A VI GT I FG I AT T LG I G VV Q LNY GL SV L FD I PESLAAQAAL IA LSVII AT I S 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 259 V V SGV S KG LKW LS NI N MA LA AA L A LFVL LL G P T L FLL QSW V Q N L G G YV QSLPQFM L RTAP F SH - DG W LGD WT I F Y W G WW I 337
Cdd:PRK09928 251 V T SGV N KG IRV LS EL N VL LA LG L I LFVL FM G D T S FLL NAL V L N V G D YV NRFMGMT L NSFA F DR p TE W MNN WT L F F W A WW V 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 338 S W A PFVG M F I ARISRGRTIR E F IGAV L LV P TVIAS LW FT IFG D SAL lrqrnng DMLVN G AVD -------- TNTSLFR LL D 409
Cdd:PRK09928 331 A W S PFVG L F L ARISRGRTIR Q F VLGT L II P FTFTL LW LS IFG N SAL ------- YEIIH G NAA faeeamah PERGFYS LL A 403
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 410 GL P IGAITSVL A VLVIVF F F VTS S DSG S LV I -------- DI L S aggel D P P KLT RV Y W A V LE G VAAAVL L LIG G ags LT A 481
Cdd:PRK09928 404 QY P AFTFSASV A TITGLL F Y VTS A DSG A LV L gnftsklk DI N S ----- D A P NWL RV F W S V AI G LLTLGM L MTN G --- IS A 475
490
....*....|
gi 624388183 482 L RTAAIATA L 491
Cdd:PRK09928 476 L QNTTVIMG L 485
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
19-488
2.09e-47
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 171.46
E-value: 2.09e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 19 I Q P A VF I P a SVV IV AMIVVSV V YSSV A E N AFV - RLN S AI T GGV GW WYILVATGFVVFALYCGISRIGTI RLG rd DE L PEF 97
Cdd:PRK03356 10 I E P K VF F P - PLI IV GILCWLT V RDLD A A N VVI n AVF S YV T NVW GW AFEWYMVVMLFGWFWLVFGPYAKK RLG -- DE K PEF 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 98 S FWA W LA M L F SAGMGIGLV F Y G VA E PLSHYLR PP R sr G VPALTDA A ANQAM A LTV FHWG LHA WA I Y VVVGLGMA Y MTYR R 177
Cdd:PRK03356 87 S TAS W IF M M F ASCTSAAVL F W G SI E IYYYIST PP F -- G LEPNSTG A KELGL A YSL FHWG PLP WA T Y SFLSVAFG Y FFFV R 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 178 G ---- RP L S V rwl L E P V VG RGRVE G AL G HA VD VIAI V GTL F GVA TSLG FGITQIASGLEY L GW I ---- RV D NW ---- W MV 245
Cdd:PRK03356 165 K mdvi RP S S T --- L V P L VG EKHAK G LF G TI VD NFYL V ALI F AMG TSLG LATPLVTECMQW L FG I phtl QL D AI iitc W II 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 246 gmiaaita TATAS V VS G VS KG LKWL S NINMA L AAALALF V LLL G P T L F LLQSWVQNL G GYVQS LP QFMLR T A P FSHD G WL 325
Cdd:PRK03356 242 -------- LNAIC V AC G LQ KG VRIA S DVRSY L SFLMLGW V FIV G G T S F IMNYFTDSV G MLLMY LP RMLFY T D P IGKG G FP 313
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 326 GD WT I FYW G WW ISW A PFVGM F I ARISRGRT I RE FIGAVL L VP T VIASLWF T IF G DSA LL RQRN N gdm LV N - GAVDTNTSL 404
Cdd:PRK03356 314 QG WT V FYW A WW VIY A IQMSI F L ARISRGRT V RE LCFGMV L GL T ASTWILW T VL G SNT LL LMDK N --- II N i PNLIEQYGV 390
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 405 F R LL ---- DG LP IGAI T SV l AVLVIV F F - F VT SSDSG S LVIDILS --- AGGELD PP K L T R VY W AV L E G VAAA VLL LI GG a 476
Cdd:PRK03356 391 A R AI ietw AA LP LSTA T MW - GFFILC F I a T VT LINAC S YTLAMST cre VRDGEE PP L L V R IG W SI L V G IIGI VLL AL GG - 468
490
....*....|..
gi 624388183 477 gs L TALR TA A IA 488
Cdd:PRK03356 469 -- L KPIQ TA I IA 478
PRK09950
PRK09950 putative transporter; Provisional
22-491
1.43e-39
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 149.94
E-value: 1.43e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 22 AVFIP A SVV IVA MIVVSVVY S SV A E N AFVRLNSAIT G GVGWWYI L V A TGF V vfa LY CGI S RI G T IRLG RDD el PE F S FWA 101
Cdd:PRK09950 14 STSLL A VFF IVA ALSLFPQQ S AA A A N TIFQWVTRTF G SPVQLFV L L A MIL V --- LY LAT S KY G N IRLG EGK -- PE Y S TLS 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 102 WL A M LFS AG M G IGLVFY GV A E PLSH Y LR P PRS rg VPALTDA A ANQAMALTV FHWG LH AWA I Y VVVG L G MAY MTY - R RGRP 180
Cdd:PRK09950 89 WL F M FIC AG L G SSTLYW GV M E WAYY Y QT P GLN -- IAPRSPK A LEYSVSYSF FHWG IS AWA T Y ALAS L I MAY HFH v R KNKG 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 181 LS VRWLLEPVV G R g RVE G AL G HA VD VIAIVG T LFGVAT SL GFGITQIAS GL EY L gw IRVD N WWM V GMIAAITATATASVV 260
Cdd:PRK09950 167 LS LSGIIAAIT G V - KPQ G PW G RL VD LMFLIA T VGALTI SL VVTAATFTR GL SA L -- TGLP N NFT V QAFVILLSGVIFCLS 243
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 261 S -- G VSK GL KW LS NINMAL A AAL AL F VL LL GPT L F LLQSWVQNL G GYV Q SLP Q FM L R T A P FSHDGWLGD WT I FYW G WWIS 338
Cdd:PRK09950 244 S yi G IDN GL QR LS KMVGWG A FLF AL L VL IV GPT E F ITNNIINSI G LTT Q NFL Q MS L F T D P MGDGSFTRN WT V FYW L WWIS 323
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 339 WA P F V G MF IA R I SRGR T I R E F I GAVL L VPT V ia SL WF t I FG dsal LRQRNNGDMLV NG AVDT --------- N T SLFR LL D 409
Cdd:PRK09950 324 YT P G V A MF VT R V SRGR K I K E V I WGLI L GSS V -- GC WF - F FG ---- VLESYAIHQFI NG VINV pqilntlgg E T AVQQ LL S 396
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 624388183 410 G LP I G AITSVLAVLVIVF F FVTSS D SGSLVIDIL S AGG --- EL DP PKLT R VY W A V LEGVAAAVL L LI G ga G SL TALR T AA 486
Cdd:PRK09950 397 S LP A G KLFLAAYLGIMII F LASHM D AVAYTMAAT S TRN lre GD DP DRGL R LF W C V VITLIPLSI L FT G -- A SL DTMK T TV 474
....*
gi 624388183 487 IA TAL 491
Cdd:PRK09950 475 VL TAL 479
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
