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hypothetical protein Z548_02284 [Mycobacterium tuberculosis 2233BH]
SRPBCC family protein( domain architecture ID 51693)
SRPBCC (START/RHOalphaC/PITP/Bet v1/CoxG/CalC) family protein may have a deep hydrophobic ligand-binding pocket
List of domain hits
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Name | Accession | Description | Interval | E-value | ||||
SRPBCC super family | cl44048 | Ligand-binding SRPBCC domain [General function prediction only]; |
10-159 | 7.48e-16 | ||||
Ligand-binding SRPBCC domain [General function prediction only]; The actual alignment was detected with superfamily member COG4276: Pssm-ID: 443417 Cd Length: 153 Bit Score: 69.89 E-value: 7.48e-16
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Name | Accession | Description | Interval | E-value | ||||
SRPBCC | COG4276 | Ligand-binding SRPBCC domain [General function prediction only]; |
10-159 | 7.48e-16 | ||||
Ligand-binding SRPBCC domain [General function prediction only]; Pssm-ID: 443417 Cd Length: 153 Bit Score: 69.89 E-value: 7.48e-16
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SRPBCC_3 | cd07820 | Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins; Uncharacterized ... |
10-151 | 3.03e-07 | ||||
Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins; Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins. Pssm-ID: 176862 Cd Length: 137 Bit Score: 46.83 E-value: 3.03e-07
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Name | Accession | Description | Interval | E-value | ||||
SRPBCC | COG4276 | Ligand-binding SRPBCC domain [General function prediction only]; |
10-159 | 7.48e-16 | ||||
Ligand-binding SRPBCC domain [General function prediction only]; Pssm-ID: 443417 Cd Length: 153 Bit Score: 69.89 E-value: 7.48e-16
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SRPBCC_3 | cd07820 | Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins; Uncharacterized ... |
10-151 | 3.03e-07 | ||||
Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins; Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins. Pssm-ID: 176862 Cd Length: 137 Bit Score: 46.83 E-value: 3.03e-07
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SRPBCC_4 | cd07822 | Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins; Uncharacterized ... |
10-154 | 4.25e-04 | ||||
Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins; Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins. Pssm-ID: 176864 Cd Length: 141 Bit Score: 38.46 E-value: 4.25e-04
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Blast search parameters | ||||
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