|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-369 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 757.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00131 12 KIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00131 92 ICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVD 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00131 172 NATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVAD 320
Cdd:MTH00131 252 DPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVAD 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFLALIPLAGWLENKLLKFN 369
Cdd:MTH00131 332 VLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEWA 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
7-362 |
7.62e-124 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 362.19 E-value: 7.62e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 7 LIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFFICLYLH 86
Cdd:COG1290 27 HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLH 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 87 IGRGLYYGSylYKE----TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVDNA 162
Cdd:COG1290 107 MFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 163 TLTRFFAFH-FLLPFLVIAATLLHALFLHETGSNNPIGV----NSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPN 237
Cdd:COG1290 185 TLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 238 llGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFW 315
Cdd:COG1290 265 --NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGV 342
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 621455353 316 TLVADVAILTWIGGMPVehPFIIIGQIASVLYFSLFLALIPLAGWLE 362
Cdd:COG1290 343 AFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-195 |
1.63e-93 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 277.71 E-value: 1.63e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:cd00284 4 IEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSY--LYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFS 158
Cdd:cd00284 84 LMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFS 163
|
170 180 190
....*....|....*....|....*....|....*..
gi 621455353 159 VDNATLTRFFAFHFLLPFLVIAATLLHALFLHETGSN 195
Cdd:cd00284 164 VDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
7-193 |
1.94e-86 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 259.62 E-value: 1.94e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 7 LIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFFICLYLH 86
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 87 IGRGLYYG--SYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVDNATL 164
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 621455353 165 TRFFAFHFLLPFLVIAATLLHALFLHETG 193
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
247-319 |
1.18e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.73 E-value: 1.18e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 621455353 247 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHT-SKQQGLTFRPL--TQLLFWTLVA 319
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQNPFRRPVatTVFLFGTVVA 140
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-369 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 757.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00131 12 KIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00131 92 ICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVD 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00131 172 NATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVAD 320
Cdd:MTH00131 252 DPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVAD 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFLALIPLAGWLENKLLKFN 369
Cdd:MTH00131 332 VLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEWA 380
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-368 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 697.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00119 13 KIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00119 93 ICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVD 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00119 173 NPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLG 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVAD 320
Cdd:MTH00119 253 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVAN 332
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFLALIPLAGWLENKLLKF 368
Cdd:MTH00119 333 LLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-368 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 675.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00074 13 KIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00074 93 ICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVD 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00074 173 KATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLG 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVAD 320
Cdd:MTH00074 253 DPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVAN 332
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFLALIPLAGWLENKLLKF 368
Cdd:MTH00074 333 TLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-368 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 671.35 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00100 12 KIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00100 92 ICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVD 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00100 172 KATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVAD 320
Cdd:MTH00100 252 DPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVAD 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFLALIPLAGWLENKLLKF 368
Cdd:MTH00100 332 LLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-357 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 642.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00191 9 KIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFF 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00191 89 ICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVD 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00191 169 NATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLG 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVAD 320
Cdd:MTH00191 249 DPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVAN 328
|
330 340 350
....*....|....*....|....*....|....*..
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFLALIPL 357
Cdd:MTH00191 329 FILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 626.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00156 2 KIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00156 82 ICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00156 162 NATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVAD 320
Cdd:MTH00156 242 DPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNI 321
|
330 340 350
....*....|....*....|....*....|..
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFL 352
Cdd:MTH00156 322 VILLTWIGARPVEEPYILTGQILTILYFLYFI 353
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-366 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 593.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00034 12 KILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00034 92 ICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVD 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00034 172 NATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALN 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVAD 320
Cdd:MTH00034 252 DPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIAT 331
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFLALIPLAGWLENKLL 366
Cdd:MTH00034 332 FFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-368 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 585.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00145 13 KVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00145 93 ICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVG 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00145 173 NATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLG 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVAD 320
Cdd:MTH00145 253 DPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGN 332
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFLaLIPLAGWLENKLLKF 368
Cdd:MTH00145 333 FFILTWIGACPVEEPYETIGQVFTVLYFLFFL-ILPLVQKLWDNILDY 379
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-367 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 552.36 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00016 13 KIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00016 93 ICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVD 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00016 173 NATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILG 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVAD 320
Cdd:MTH00016 253 DPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSN 332
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFLaLIPLAGWLENKLLK 367
Cdd:MTH00016 333 FLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFM-INPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-369 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 521.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00022 11 SIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFF 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00022 91 LCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVS 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00022 171 NATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLG 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVAD 320
Cdd:MTH00022 251 DPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVD 330
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFLALIPLAGWLENKLLKFN 369
Cdd:MTH00022 331 FILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLFKN 379
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
2-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 512.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 2 IVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFFI 81
Cdd:MTH00053 14 LVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 82 CLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVDN 161
Cdd:MTH00053 94 CVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSN 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 162 ATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLGD 241
Cdd:MTH00053 174 ATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGD 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 242 PENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVADV 321
Cdd:MTH00053 254 AENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDF 333
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 621455353 322 AILTWIGGMPVEHPFIIIGQIASVLYFSLFLALIPLAGWLENKLLK 367
Cdd:MTH00053 334 FLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-367 |
2.52e-177 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 497.52 E-value: 2.52e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00224 13 KILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00224 93 LFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVD 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00224 173 NATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFT 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVAD 320
Cdd:MTH00224 253 DPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTS 332
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFLaLIPLAGWLENKLLK 367
Cdd:MTH00224 333 WAILTWIGGRPVEDPFEGIGQVFTILYFSYFI-ISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
5-369 |
3.18e-139 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 400.85 E-value: 3.18e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 5 DALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFFICLY 84
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 85 LHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVDNATL 164
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 165 TRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFS--PNLLGDP 242
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriETLLQDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 243 ENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVADVA 322
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 621455353 323 ILTWIGGMPV-EHPFIIIGQIASVLYFSLFLALIPLAGWLENKLLKFN 369
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSNLFYEYN 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
7-362 |
7.62e-124 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 362.19 E-value: 7.62e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 7 LIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFFICLYLH 86
Cdd:COG1290 27 HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLH 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 87 IGRGLYYGSylYKE----TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVDNA 162
Cdd:COG1290 107 MFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 163 TLTRFFAFH-FLLPFLVIAATLLHALFLHETGSNNPIGV----NSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPN 237
Cdd:COG1290 185 TLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 238 llGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFW 315
Cdd:COG1290 265 --NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGV 342
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 621455353 316 TLVADVAILTWIGGMPVehPFIIIGQIASVLYFSLFLALIPLAGWLE 362
Cdd:COG1290 343 AFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-354 |
1.71e-123 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 360.02 E-value: 1.71e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDlLGFLLLLTGLTSLALFSPNLLG 240
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 241 DPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQqglTFRPLTQLLFWTLVAD 320
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|....
gi 621455353 321 VAILTWIGGMPVEHPFIIIGQIASVLYFSLFLAL 354
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-195 |
1.63e-93 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 277.71 E-value: 1.63e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:cd00284 4 IEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSY--LYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFS 158
Cdd:cd00284 84 LMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFS 163
|
170 180 190
....*....|....*....|....*....|....*..
gi 621455353 159 VDNATLTRFFAFHFLLPFLVIAATLLHALFLHETGSN 195
Cdd:cd00284 164 VDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-346 |
8.50e-88 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 268.77 E-value: 8.50e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 1 KIVNDALIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFF 80
Cdd:MTH00046 3 SLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 81 ICLYLHIGRGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVD 160
Cdd:MTH00046 83 ILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 161 NATLTRFFAFHFLLPFLVIAATLLHALFLHETGSNNPIGV-NSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLL 239
Cdd:MTH00046 163 GVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 240 GDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGvLALLFSILVLMVVPllhtSKQQGLTFRPLTQLLFWTLVA 319
Cdd:MTH00046 243 LDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVS 317
|
330 340
....*....|....*....|....*..
gi 621455353 320 DVAILTWIGGMPVEHPFIIIGQIASVL 346
Cdd:MTH00046 318 LFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
7-193 |
1.94e-86 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 259.62 E-value: 1.94e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 7 LIDLPAPSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFFICLYLH 86
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 87 IGRGLYYG--SYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVDNATL 164
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 621455353 165 TRFFAFHFLLPFLVIAATLLHALFLHETG 193
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
196-343 |
3.49e-49 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 162.43 E-value: 3.49e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 196 NPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 275
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 621455353 276 KLGGVLALLFSILVLMVVPLLHTSKQQGlTFRPLTQLLFWTLVADVAILTWIGGMPVEHPFIIIGQIA 343
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
247-347 |
4.02e-46 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 153.02 E-value: 4.02e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 247 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHTSKQQGLTFRPLTQLLFWTLVADVAILTW 326
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 621455353 327 IGGMPVEHPFIIIGQIASVLY 347
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
77-242 |
7.45e-43 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 146.62 E-value: 7.45e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 77 SFFFICLYLHIGRGLYYGSYLYKE--TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIW 154
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 155 GGFSVDNATLTRFFAFHF-LLPFLVIAATLLHALFLHETGSNNPIGVNSDADKISFHPYFSYKDLLGFLLLLTGLTSLAL 233
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 621455353 234 FSPNLLGDP 242
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
22-198 |
3.58e-40 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 141.39 E-value: 3.58e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 22 FGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFFICLYLHIGRGLYYGSYLYKE- 100
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 101 -TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVDNATLTRFFAFH-FLLPFLV 178
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 621455353 179 IAATLLHALFLHETGSNNPI 198
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
13-198 |
1.41e-33 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 124.06 E-value: 1.41e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 13 PSNISAWWNFGSLLLLCLMVQILTGLFLAMHYTSDISTAFSSVVHICRDVNHGWLIRNLHANGASFFFICLYLHIGRGLY 92
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 621455353 93 YGSYLYKE--TWNIGVVLFLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGNALVQWIWGGFSVDNATLTRFFAF 170
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 621455353 171 H-FLLPFLVIAATLLHALFLHETGSNNPI 198
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
247-319 |
4.80e-10 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 57.70 E-value: 4.80e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 621455353 247 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLL-HTSKQQGLTFRP--LTQLLFWTLVA 319
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQNPFRRPvaTTVFLIGTAVA 140
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
247-318 |
7.28e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 57.11 E-value: 7.28e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 621455353 247 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHT-SKQQGLTFRPL--TQLLFWTLV 318
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENvNKFQNPFRRPVatAVFLFGTLV 140
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
247-319 |
1.18e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.73 E-value: 1.18e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 621455353 247 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPLLHT-SKQQGLTFRPL--TQLLFWTLVA 319
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENvNKFQNPFRRPVatTVFLFGTVVA 140
|
|
| |
